/projects/compbio/experiments/casp5/scripts-human/create_summary_html \
T0136-1-290 file:/projects/compbio/experiments/casp5/t0136-1-290 > /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_master_table_head_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
Inputs >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
echo Received sequence T0136-1-290.a2m
Received sequence T0136-1-290.a2m
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Submitted sequence(s)" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.a2m T0136-1-290.a2m >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k -out T0136-1-290.t2k \
-seed T0136-1-290.a2m 


@@@@ chgrp protein /projects/compbio/tmp/target2k-bark-3566


@@@@ cp /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m m0.a2m


@@@@ checkseq foo -alphabet protein -db m0.a2m > init.check
SAM: checkseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:11
Done with sequence reading
# About to count sequences in /projects/compbio/data/nrp/nr
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: E-value thresholds used are
prefilter: 0.01,	actual: 0.0001
prefilter: 1,	actual: 0.0002
prefilter: 10,	actual: 0.001
prefilter: 400,	actual: 0.005
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: aweight_bits are 0.8, 0.7, 0.6, 0.5
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: db_size= 751641 reverse_diff= 4
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: blast_max_report= 20000
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: db=/projects/compbio/data/nrp/nr
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: aweight_method=1 aweight_exponent=10
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: force_seed=1 constraints=1
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/target2k: jump_in=0.2 jump_out=1 fimstrength=1 fimtrans=-1


@@@@ wu-blast-prefilter -tmp_dir /projects/compbio/tmp/target2k-bark-3566 -out prefilter -seed m0.a2m  -prefilter_thresholds 0.01,1,10,400  -db /projects/compbio/data/nrp/nr -blast_max_report 20000
main::echo_parameters() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 90.
main::build_query_files() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 96.
main::blast_query_to_database() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 99.
main::accumulate_blast_hits() called too early to check prototype at /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter line 100.


@@@@ chgrp protein /projects/compbio/tmp/target2k-bark-3566/blast-prefilter-bark-3615
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter: E-value thresholds used are
For /projects/postgres/tmp/target2k-bark-3566/prefilter_1.fa,  0.01
For /projects/postgres/tmp/target2k-bark-3566/prefilter_2.fa,  1
For /projects/postgres/tmp/target2k-bark-3566/prefilter_3.fa,  10
For /projects/postgres/tmp/target2k-bark-3566/prefilter_4.fa,  400

/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/wu-blast-prefilter: db=/projects/compbio/data/nrp/nr


@@@@ uniqueseq init -alignfile /projects/postgres/tmp/target2k-bark-3566/m0.a2m -a protein -a2mdots 0
SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25
Reading alignment file /projects/postgres/tmp/target2k-bark-3566/m0.a2m (1 sequence, 290 columns) as A2M alignment.
Writing sequence output to init.a2m.
No sequences have been dropped.


@@@@ /projects/compbio/bin/wu-blastp /projects/compbio/data/nrp/nr 1.fasta  E=400 V=20000 B=0 -gi > 1.fasta-blast.out
Searched 751641 sequences
# parsing wu-blastp output


@@@@ rm -f 1.fasta < /dev/null


@@@@ rm -f 1.fasta-blast.out < /dev/null
# Extracting hits in FASTA format from /projects/compbio/data/nrp/nr


@@@@ rm -rf /projects/compbio/tmp/target2k-bark-3566/blast-prefilter-bark-3615 < /dev/null


@@@@ modelfromalign unused -alignfile m0.a2m \
             -constraints_from_align 1 -constraints_out m0.cst
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file m0.a2m (1 sequence, 290 columns) as A2M alignment.
# About to count sequences in m0.a2m
# About to count sequences in prefilter_1.fa


@@@@ modelfromalign tmp_1-a -alignfile m0.a2m \
		-insert /projects/compbio/lib/gap1.5.regularizer \
		-aweight_bits 0.8\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints m0.cst -constraints_out tmp_1-a.cst
Reading parameter file /projects/compbio/lib/gap1.5.regularizer
/projects/compbio/lib/gap1.5.regularizer(1):  Reading REGULARIZER: gap1.5.  Weak regularizer, gaps average 1.5, matches average 10
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file m0.a2m (1 sequence, 290 columns) as A2M alignment.
DEBUG: include_all=0


@@@@ hmmscore tmp_1-a -i tmp_1-a.mod  -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
    	-adpstyle 1 \
	-align_short 0	\
	-simple_threshold -26.7403544671695 -Emax 0.0001 \
	-mdEmax 0.0001\
        -select_score 4 \
	-select_seq 4  -select_mdalign 4 -select_md 4 -Motifcutoff 0.0689655172413793 -db prefilter_1.fa -constraints tmp_1-a.cst -constraints_out tmp_1-a-md.cst
Reading parameter file tmp_1-a.mod
tmp_1-a.mod(22):  Reading MODEL --  Model from alignment file m0.a2m
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_1-a.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -107.020599
Database has 163 sequences with 80614 residues.


@@@@ sortseq tmp_1-a-sort -alignfile tmp_1-a.mult \
    		-NLLfile tmp_1-a.mstat -a2mdots 0
SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00
Reading alignment file tmp_1-a.mult (154 sequences, 290 columns) as A2M alignment.
Reading scores from file tmp_1-a.mstat
Writing sequence output to tmp_1-a-sort.a2m.


@@@@ cat m0.a2m tmp_1-a-sort.a2m > tmp_1-a.train.seq


@@@@ cat m0.cst tmp_1-a-md.cst > tmp_1-a.train.cst
# About to count sequences in tmp_1-a.train.seq
# num_seqs=155 nll_thresh=-22.7403544671695 frac_id=0.850095352912844


@@@@ uniqueseq thinned_tmp -alignfile tmp_1-a.train.seq -a protein \
        -percent_id 0.850095352912844 -a2mdots 0
SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25
Reading alignment file tmp_1-a.train.seq (155 sequences, 290 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 3 (of 155) duplicate sequences with differing IDs
Dropping 43 (of 155) sequences with > 85.0% id
109 sequences left after dropping 46 of 155 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_1-a.train.seq \
		-aweight_bits 0.8\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file tmp_1-a.train.seq (109 sequences, 290 columns) as A2M alignment.


@@@@ buildmodel tmp_1-b -insert tmp_1-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_1-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/gap1.5.regularizer -sequence_weights tmp_1-a.w -constraints tmp_1-a.train.cst
Reading parameter file tmp_1-a.mod
tmp_1-a.mod(22):  Reading MODEL --  Model from alignment file m0.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/gap1.5.regularizer
/projects/compbio/lib/gap1.5.regularizer(1):  Reading REGULARIZER: gap1.5.  Weak regularizer, gaps average 1.5, matches average 10
SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50
-822.40   -4.32  -196.10 115.06  15 0 291 


@@@@ hmmscore tmp_1-b -i tmp_1-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
	-db m0.a2m -db tmp_1-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -26.7403544671695 -Emax 0.0001 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.0689655172413793 \
	-align_short 5	-mdEmax 0.0001 -constraints tmp_1-a.train.cst -constraints_out m_1.cst
Reading parameter file tmp_1-b.mod
tmp_1-b.mod(18):  Reading MODEL --  Final model for run tmp_1-b (internally generated FIMs removed)
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_1-b.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -215.087372
Database has 163 sequences with 80719 residues.


@@@@ cp -f tmp_1-b.mult m_1.a2m
# About to count sequences in prefilter_2.fa


@@@@ modelfromalign tmp_2-a -alignfile m_1.a2m \
		-insert /projects/compbio/lib/stiff-gap5.regularizer \
		-aweight_bits 0.7\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints m_1.cst -constraints_out tmp_2-a.cst
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file m_1.a2m (201 sequences, 290 columns) as A2M alignment.
DEBUG: include_all=0


@@@@ hmmscore tmp_2-a -i tmp_2-a.mod  -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
    	-adpstyle 1 \
	-align_short 0	\
	-simple_threshold -26.0472072864765 -Emax 0.0002 \
	-mdEmax 0.0002\
        -select_score 4 \
	-select_seq 4  -select_mdalign 4 -select_md 4 -Motifcutoff 0.0689655172413793 -db prefilter_2.fa -constraints tmp_2-a.cst -constraints_out tmp_2-a-md.cst
Reading parameter file tmp_2-a.mod
tmp_2-a.mod(22):  Reading MODEL --  Model from alignment file m_1.a2m
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_2-a.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -197.727417
Database has 177 sequences with 93823 residues.


@@@@ sortseq tmp_2-a-sort -alignfile tmp_2-a.mult \
    		-NLLfile tmp_2-a.mstat -a2mdots 0
SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00
Reading alignment file tmp_2-a.mult (261 sequences, 290 columns) as A2M alignment.
Reading scores from file tmp_2-a.mstat
Writing sequence output to tmp_2-a-sort.a2m.


@@@@ cat m0.a2m tmp_2-a-sort.a2m > tmp_2-a.train.seq


@@@@ cat m0.cst tmp_2-a-md.cst > tmp_2-a.train.cst
# About to count sequences in tmp_2-a.train.seq
# num_seqs=262 nll_thresh=-22.0472072864765 frac_id=0.759024235532917


@@@@ uniqueseq thinned_tmp -alignfile tmp_2-a.train.seq -a protein \
        -percent_id 0.759024235532917 -a2mdots 0
SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25
Reading alignment file tmp_2-a.train.seq (262 sequences, 290 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 12 (of 262) duplicate sequences with differing IDs
Dropping 103 (of 262) sequences with > 75.9% id
147 sequences left after dropping 115 of 262 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_2-a.train.seq \
		-aweight_bits 0.7\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file tmp_2-a.train.seq (147 sequences, 290 columns) as A2M alignment.


@@@@ buildmodel tmp_2-b -insert tmp_2-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_2-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/stiff-gap5.regularizer -sequence_weights tmp_2-a.w -constraints tmp_2-a.train.cst
Reading parameter file tmp_2-a.mod
tmp_2-a.mod(22):  Reading MODEL --  Model from alignment file m_1.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50
-821.83  -19.60  -168.17  89.35  10 0 291 


@@@@ hmmscore tmp_2-b -i tmp_2-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
	-db m0.a2m -db tmp_2-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -26.0472072864765 -Emax 0.0002 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.0689655172413793 \
	-align_short 5	-mdEmax 0.0002 -constraints tmp_2-a.train.cst -constraints_out m_2.cst
Reading parameter file tmp_2-b.mod
tmp_2-b.mod(18):  Reading MODEL --  Final model for run tmp_2-b (internally generated FIMs removed)
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_2-b.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -202.389359
Database has 178 sequences with 94113 residues.


@@@@ cp -f tmp_2-b.mult m_2.a2m
# About to count sequences in prefilter_3.fa


@@@@ modelfromalign tmp_3-a -alignfile m_2.a2m \
		-insert /projects/compbio/lib/stiff-gap5.regularizer \
		-aweight_bits 0.6\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints m_2.cst -constraints_out tmp_3-a.cst
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file m_2.a2m (262 sequences, 290 columns) as A2M alignment.
DEBUG: include_all=0


@@@@ hmmscore tmp_3-a -i tmp_3-a.mod  -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
    	-adpstyle 1 \
	-align_short 0	\
	-simple_threshold -24.4377693729781 -Emax 0.001 \
	-mdEmax 0.001\
        -select_score 4 \
	-select_seq 4  -select_mdalign 4 -select_md 4 -Motifcutoff 0.0689655172413793 -db prefilter_3.fa -constraints tmp_3-a.cst -constraints_out tmp_3-a-md.cst
Reading parameter file tmp_3-a.mod
tmp_3-a.mod(22):  Reading MODEL --  Model from alignment file m_2.a2m
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_3-a.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -175.901459
Database has 208 sequences with 126906 residues.


@@@@ sortseq tmp_3-a-sort -alignfile tmp_3-a.mult \
    		-NLLfile tmp_3-a.mstat -a2mdots 0
SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00
Reading alignment file tmp_3-a.mult (285 sequences, 290 columns) as A2M alignment.
Reading scores from file tmp_3-a.mstat
Writing sequence output to tmp_3-a-sort.a2m.


@@@@ cat m0.a2m tmp_3-a-sort.a2m > tmp_3-a.train.seq


@@@@ cat m0.cst tmp_3-a-md.cst > tmp_3-a.train.cst
# About to count sequences in tmp_3-a.train.seq
# num_seqs=286 nll_thresh=-20.4377693729781 frac_id=0.73713472706784


@@@@ uniqueseq thinned_tmp -alignfile tmp_3-a.train.seq -a protein \
        -percent_id 0.73713472706784 -a2mdots 0
SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25
Reading alignment file tmp_3-a.train.seq (286 sequences, 290 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 18 (of 286) duplicate sequences with differing IDs
Dropping 127 (of 286) sequences with > 73.7% id
141 sequences left after dropping 145 of 286 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_3-a.train.seq \
		-aweight_bits 0.6\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file tmp_3-a.train.seq (141 sequences, 290 columns) as A2M alignment.


@@@@ buildmodel tmp_3-b -insert tmp_3-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_3-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/stiff-gap5.regularizer -sequence_weights tmp_3-a.w -constraints tmp_3-a.train.cst
Reading parameter file tmp_3-a.mod
tmp_3-a.mod(22):  Reading MODEL --  Model from alignment file m_2.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50
-822.30  -28.40  -159.66  84.35  7 0 291 


@@@@ hmmscore tmp_3-b -i tmp_3-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
	-db m0.a2m -db tmp_3-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -24.4377693729781 -Emax 0.001 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.0689655172413793 \
	-align_short 5	-mdEmax 0.001 -constraints tmp_3-a.train.cst -constraints_out m_3.cst
Reading parameter file tmp_3-b.mod
tmp_3-b.mod(18):  Reading MODEL --  Final model for run tmp_3-b (internally generated FIMs removed)
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_3-b.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -180.232834
Database has 201 sequences with 122895 residues.


@@@@ cp -f tmp_3-b.mult m_3.a2m
# About to count sequences in prefilter_4.fa


@@@@ modelfromalign tmp_4-a -alignfile m_3.a2m \
		-insert /projects/compbio/lib/fssp-trained.regularizer \
		-aweight_bits 0.5\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints m_3.cst -constraints_out tmp_4-a.cst
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file m_3.a2m (296 sequences, 290 columns) as A2M alignment.
DEBUG: include_all=0


@@@@ hmmscore tmp_4-a -i tmp_4-a.mod  -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
    	-adpstyle 1 \
	-align_short 0	\
	-simple_threshold -22.8283314552223 -Emax 0.005 \
	-mdEmax 0.005\
        -select_score 4 \
	-select_seq 4  -select_mdalign 4 -select_md 4 -Motifcutoff 0.0689655172413793 -db prefilter_4.fa -constraints tmp_4-a.cst -constraints_out tmp_4-a-md.cst
Reading parameter file tmp_4-a.mod
tmp_4-a.mod(22):  Reading MODEL --  Model from alignment file m_3.a2m
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_4-a.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -73.790085
Database has 568 sequences with 278295 residues.


@@@@ sortseq tmp_4-a-sort -alignfile tmp_4-a.mult \
    		-NLLfile tmp_4-a.mstat -a2mdots 0
SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00
Reading alignment file tmp_4-a.mult (370 sequences, 290 columns) as A2M alignment.
Reading scores from file tmp_4-a.mstat
Writing sequence output to tmp_4-a-sort.a2m.


@@@@ cat m0.a2m tmp_4-a-sort.a2m > tmp_4-a.train.seq


@@@@ cat m0.cst tmp_4-a-md.cst > tmp_4-a.train.cst
# About to count sequences in tmp_4-a.train.seq
# num_seqs=371 nll_thresh=-18.8283314552223 frac_id=0.699376598806264


@@@@ uniqueseq thinned_tmp -alignfile tmp_4-a.train.seq -a protein \
        -percent_id 0.699376598806264 -a2mdots 0
SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25
Reading alignment file tmp_4-a.train.seq (371 sequences, 290 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 32 (of 371) duplicate sequences with differing IDs
Dropping 202 (of 371) sequences with > 69.9% id
137 sequences left after dropping 234 of 371 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_4-a.train.seq \
		-aweight_bits 0.5\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file tmp_4-a.train.seq (137 sequences, 290 columns) as A2M alignment.


@@@@ buildmodel tmp_4-b -insert tmp_4-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_4-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/fssp-trained.regularizer -sequence_weights tmp_4-a.w -constraints tmp_4-a.train.cst
Reading parameter file tmp_4-a.mod
tmp_4-a.mod(22):  Reading MODEL --  Model from alignment file m_3.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: buildmodel v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:50
-823.10  -50.00  -152.30  78.41  8 0 291 


@@@@ hmmscore tmp_4-b -i tmp_4-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
	-db m0.a2m -db tmp_4-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -22.8283314552223 -Emax 0.005 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.0689655172413793 \
	-align_short 5	-mdEmax 0.005 -constraints tmp_4-a.train.cst -constraints_out m_4.cst
Reading parameter file tmp_4-b.mod
tmp_4-b.mod(18):  Reading MODEL --  Final model for run tmp_4-b (internally generated FIMs removed)
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_4-b.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -161.472733
Database has 243 sequences with 169851 residues.


@@@@ cp -f tmp_4-b.mult m_4.a2m


@@@@ modelfromalign tmp_5-a -alignfile m_4.a2m \
		-insert /projects/compbio/lib/fssp-trained.regularizer \
		-aweight_bits 0.5\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints m_4.cst -constraints_out tmp_5-a.cst
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file m_4.a2m (371 sequences, 290 columns) as A2M alignment.
DEBUG: include_all=0


@@@@ hmmscore tmp_5-a -i tmp_5-a.mod  -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 751641 \
    	-adpstyle 5 \
	-align_short 0	\
	-simple_threshold -22.8283314552223 -Emax 0.005 \
	-mdEmax 0.005\
        -select_score 4 \
	-select_seq 4  -select_mdalign 4 -select_md 4 -Motifcutoff 0.0689655172413793 -db prefilter_4.fa -constraints tmp_5-a.cst -constraints_out tmp_5-a-md.cst
Reading parameter file tmp_5-a.mod
tmp_5-a.mod(22):  Reading MODEL --  Model from alignment file m_4.a2m
SAM: hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model tmp_5-a.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -74.628120
Database has 568 sequences with 278295 residues.


@@@@ sortseq tmp_5-a-sort -alignfile tmp_5-a.mult \
    		-NLLfile tmp_5-a.mstat -a2mdots 0
SAM: sortseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:00
Reading alignment file tmp_5-a.mult (366 sequences, 290 columns) as A2M alignment.
Reading scores from file tmp_5-a.mstat
Writing sequence output to tmp_5-a-sort.a2m.


@@@@ cat m0.a2m tmp_5-a-sort.a2m > tmp_5-a.train.seq


@@@@ cat m0.cst tmp_5-a-md.cst > tmp_5-a.train.cst


@@@@ cp tmp_5-a.train.seq /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.a2m


@@@@ cp tmp_5-a.train.cst /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.cst


@@@@ rm -rf /projects/compbio/tmp/target2k-bark-3566 < /dev/null
gzip -f T0136-1-290.t2k.a2m
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 multiple alignment in a2m format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.a2m.gz T0136-1-290.t2k.a2m.gz >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
gunzip -c T0136-1-290.t2k.a2m.gz > tmp.a2m
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/a2m2html -a2m_in tmp.a2m  > T0136-1-290.t2k.pa.html
SAM: /projects/compbio/bin/i686/prettyalign v3.3.1 (December 20, 2001) compiled 04/02/02_13:38:30
rm tmp.a2m
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 multiple alignment in pretty html format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.pa.html T0136-1-290.t2k.pa.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/scripts2k/w0.5 T0136-1-290.t2k.a2m.gz T0136-1-290.t2k-w0.5.mod.tmp


@@@@ chgrp protein /var/tmp/tmp-build-weighted-model-bark-3916


@@@@ uniqueseq /var/tmp/tmp-build-weighted-model-bark-3916/tmp -alignfile T0136-1-290.t2k.a2m.gz \
    		-a protein -percent_id 0.8
SAM: uniqueseq v3.3.1 (December 20, 2001) compiled 04/02/02_13:39:07
Reading alignment file T0136-1-290.t2k.a2m.gz (367 sequences, 290 columns) as A2M alignment.
Writing sequence output to /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m.
Dropping 31 (of 367) duplicate sequences with differing IDs
Dropping 131 (of 367) sequences with > 80.0% id
205 sequences left after dropping 162 of 367 sequences.


@@@@ modelfromalign /var/tmp/tmp-build-weighted-model-bark-3916/tmp -alignfile /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m \
		-insert /projects/compbio/lib/fssp-trained.regularizer \
		-ins_jump_conf 1 \
		-match_jump_conf 1 \
		-del_jump_conf 1 \
		-prior_library /projects/compbio/lib/recode3.20comp \
		-binary_output 1  -a protein -aweight_method 1 -aweight_bits 0.5 -aweight_exponent 10
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: modelfromalign v3.3.1 (December 20, 2001) compiled 04/02/02_13:38:28
Reading alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m (205 sequences, 290 columns) as A2M alignment.


@@@@ cp -f /var/tmp/tmp-build-weighted-model-bark-3916/tmp.mod T0136-1-290.t2k-w0.5.mod.tmp


@@@@ rm -rf /var/tmp/tmp-build-weighted-model-bark-3916 </dev/null
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmconvert T0136-1-290.t2k-w0.5 -model_file T0136-1-290.t2k-w0.5.mod.tmp
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmconvert v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:35
rm -f T0136-1-290.t2k-w0.5.mod.tmp
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 target hidden Markov model" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-w0.5.mod T0136-1-290.t2k-w0.5.mod >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Secondary Structure Prediction" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/uniqueseq unique-tmp -alignfile T0136-1-290.t2k.a2m.gz -percent_id 0.90
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/uniqueseq v3.3.1 (December 20, 2001) compiled 04/11/02_15:35:25
Reading alignment file T0136-1-290.t2k.a2m.gz (367 sequences, 290 columns) as A2M alignment.
Writing sequence output to unique-tmp.a2m.
Dropping 31 (of 367) duplicate sequences with differing IDs
Dropping 94 (of 367) sequences with > 90.0% id
242 sequences left after dropping 125 of 367 sequences.
gzip -9f unique-tmp.a2m
mv unique-tmp.a2m.gz T0136-1-290.t2k-thin90.a2m.gz
echo ReadNeuralNet /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/predict_2nd/networks/t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net > tmp.script
echo ReadA2M T0136-1-290.t2k-thin90.a2m.gz >> tmp.script
echo PrintPrediction T0136-1-290.t2k.dssp-ebghstl 4069-6308-1312 >> tmp.script
echo PrintPredictionFasta T0136-1-290.t2k.dssp-ebghstl.seq >> tmp.script
echo PrintRDB T0136-1-290.t2k.dssp-ebghstl.rdb >> tmp.script
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/predict_2nd/predict-2nd < tmp.script
# command:# Neural network set to t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
# command:# Reading A2M format from T0136-1-290.t2k-thin90.a2m.gz
# Using SequenceWeight HenikoffWeight(-1, 1)
# requested less than 0 bits saved, using initial weights
# After reading T0136-1-290.t2k-thin90.a2m.gz, have 290 columns in 1 chains
# command:# Initializing Gain for EBGHTL
# Initializing Gain for third_layer
# Initializing Gain for second_layer
# Initializing Gain for FirstLayer
# Network initialization done
# Printing prediction to T0136-1-290.t2k.dssp-ebghstl
# command:# Network initialization done
# Printing prediction  in FASTA format to T0136-1-290.t2k.dssp-ebghstl.seq
# command:# Network initialization done
# Printing prediction to T0136-1-290.t2k.dssp-ebghstl.rdb
# command:rm tmp.script
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/2nd-rdb-to-sam-model -alphabet EBGHSTL T0136-1-290.t2k.dssp-ebghstl.rdb T0136-1-290.t2k.dssp-ebghstl.mod
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore T0136-1-290.t2k-100-30-dssp-ebghstl \
-calibrate 1  \
-alphabet protein,EBGHSTL \
-trackmod T0136-1-290.t2k-w0.5.mod,T0136-1-290.t2k.dssp-ebghstl.mod \
-db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.dssps \
-trackcoeff 1.0,0.3 \
-sw 2 -dpstyle 0  -subtract_null 4 \
-select_score 0 \
-trackprior rsdb-comp2.32comp,t99-2d-comp.9comp
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Creating calibrated model library T0136-1-290.t2k-100-30-dssp-ebghstl.mlib (calibrate = 1).
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calibrating to sequence database.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.822966
Model T0136-1-290.t2k-100-30-dssp-ebghstl calibrated to tau=0.8300 and lambda=1.3461
Database has 6078 sequences with 1431381 residues.
rm -f T0136-1-290.t2k-100-30-dssp-ebghstl.dist
/projects/compbio/experiments/casp5/scripts-human/rasmol_color_from_2ry < T0136-1-290.t2k.dssp-ebghstl.seq > T0136-1-290-dssp-color.rasmol	
ln -s T0136-1-290-dssp-color.rasmol dssp
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"DSSP EBGHSTL structure prediction CASP format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl T0136-1-290.t2k.dssp-ebghstl >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"DSSP EBGHSTL structure prediction RDB format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.rdb T0136-1-290.t2k.dssp-ebghstl.rdb >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"DSSP EBGHSTL structure prediction sequence format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq T0136-1-290.t2k.dssp-ebghstl.seq >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 DSSP EBGHSTL target HMM" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib \
	T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
echo ReadNeuralNet /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/predict_2nd/networks/t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-stride-seeded.net > tmp.script
echo ReadA2M T0136-1-290.t2k-thin90.a2m.gz >> tmp.script
echo PrintPrediction T0136-1-290.t2k.stride-ebghtl  >> tmp.script
echo PrintPredictionFasta T0136-1-290.t2k.stride-ebghtl.seq >> tmp.script
echo PrintRDB T0136-1-290.t2k.stride-ebghtl.rdb >> tmp.script
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/predict_2nd/predict-2nd < tmp.script
# command:# Neural network set to t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net
# command:# Reading A2M format from T0136-1-290.t2k-thin90.a2m.gz
# Using SequenceWeight HenikoffWeight(-1, 1)
# requested less than 0 bits saved, using initial weights
# After reading T0136-1-290.t2k-thin90.a2m.gz, have 290 columns in 1 chains
# command:# Initializing Gain for EBGHTL
# Initializing Gain for third_layer
# Initializing Gain for second_layer
# Initializing Gain for FirstLayer
# Network initialization done
# Printing prediction to T0136-1-290.t2k.stride-ebghtl
# command:# Network initialization done
# Printing prediction  in FASTA format to T0136-1-290.t2k.stride-ebghtl.seq
# command:# Network initialization done
# Printing prediction to T0136-1-290.t2k.stride-ebghtl.rdb
# command:rm tmp.script
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/2nd-rdb-to-sam-model -alphabet EBGHTL T0136-1-290.t2k.stride-ebghtl.rdb T0136-1-290.t2k.stride-ebghtl.mod
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore T0136-1-290.t2k-100-30-stride-ebghtl \
-calibrate 1  \
-alphabet protein,EBGHTL \
-trackmod T0136-1-290.t2k-w0.5.mod,T0136-1-290.t2k.stride-ebghtl.mod \
-db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.2ds \
-trackcoeff 1.0,0.3 \
-sw 2 -dpstyle 0  -subtract_null 4 \
-select_score 0 \
-trackprior rsdb-comp2.32comp,t99-ebghtl-comp.6comp
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Creating calibrated model library T0136-1-290.t2k-100-30-stride-ebghtl.mlib (calibrate = 1).
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calibrating to sequence database.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.945576
Model T0136-1-290.t2k-100-30-stride-ebghtl calibrated to tau=0.8293 and lambda=1.2247
Database has 6078 sequences with 1431381 residues.
rm -f T0136-1-290.t2k-100-30-stride-ebghtl.dist
/projects/compbio/experiments/casp5/scripts-human/rasmol_color_from_2ry < T0136-1-290.t2k.stride-ebghtl.seq > T0136-1-290-stride-color.rasmol	
ln -s T0136-1-290-stride-color.rasmol stride
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Stride EBGHTL structure prediction CASP format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.stride-ebghtl T0136-1-290.t2k.stride-ebghtl >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Stride EBGHTL structure prediction RDB format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.rdb T0136-1-290.t2k.stride-ebghtl.rdb >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Stride EBGHTL structure prediction sequence format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq T0136-1-290.t2k.stride-ebghtl.seq >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 Stride EBGHTL target HMM" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib\
	T0136-1-290.t2k-100-30-stride-ebghtl.mlib >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Sequence Logos" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/makelogo T0136-1-290-w0.5-logo -i T0136-1-290.t2k-w0.5.mod \
 -logo_bars_per_line 50  -logo_title "T0136-1-290 w0.5"  \
 -logo_caption_f T0136-1-290.t2k.dssp-ebghstl.seq \
 -logo_under_file T0136-1-290.a2m
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/makelogo v3.3.1 (December 20, 2001) compiled 04/02/02_13:39:30
% Sequence-model (global) (SW = 0)
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 multiple alignment in sequence logo format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290-w0.5-logo.eps T0136-1-290-w0.5-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/makelogo T0136-1-290-dssp-ebghstl-logo -i T0136-1-290.t2k.dssp-ebghstl.mod \
-logo_bars_per_line 50  -logo_title "T0136-1-290 EBGHSTL"  \
-logo_caption_f T0136-1-290.t2k.dssp-ebghstl.seq \
-logo_under_file T0136-1-290.a2m  \
-logo_color_file /projects/compbio/lib/stride.colors 
Reading parameter file T0136-1-290.t2k.dssp-ebghstl.mod
T0136-1-290.t2k.dssp-ebghstl.mod(3):  Reading MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/makelogo v3.3.1 (December 20, 2001) compiled 04/02/02_13:39:30
% Sequence-model (global) (SW = 0)
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"DSSP EBGHSTL structure prediction in sequence logo format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290-dssp-ebghstl-logo.eps T0136-1-290-dssp-ebghstl-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/makelogo T0136-1-290-stride-ebghtl-logo -i T0136-1-290.t2k.stride-ebghtl.mod \
-logo_bars_per_line 50  -logo_title "T0136-1-290 EBGHTL"  \
-logo_caption_f T0136-1-290.t2k.stride-ebghtl.seq \
-logo_under_file T0136-1-290.a2m \
-logo_color_file /projects/compbio/lib/stride.colors 
Reading parameter file T0136-1-290.t2k.stride-ebghtl.mod
T0136-1-290.t2k.stride-ebghtl.mod(3):  Reading MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/makelogo v3.3.1 (December 20, 2001) compiled 04/02/02_13:39:30
% Sequence-model (global) (SW = 0)
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Stride EBGHTL structure prediction in sequence logo format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290-stride-ebghtl-logo.eps T0136-1-290-stride-ebghtl-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Target model scores" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore T0136-1-290.t2k-100-30-dssp-ebghstl \
-modellibrary T0136-1-290.t2k-100-30-dssp-ebghstl.mlib \
-db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.dssps \
-db_size 6014 \
-select_score 4 -Emax 40.
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.......
Average NLL-Simple NULL score:        -12.822966
Database has 6078 sequences with 1431381 residues.
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore T0136-1-290.t2k-100-30-stride-ebghtl \
-modellibrary T0136-1-290.t2k-100-30-stride-ebghtl.mlib \
-db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs,/projects/compbio/experiments/models.97/indexes/t2k.2ds \
-db_size 6014 \
-select_score 4 -Emax 40.
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.......
Average NLL-Simple NULL score:        -12.945576
Database has 6078 sequences with 1431381 residues.
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-100-30-dssp-ebghstl < T0136-1-290.t2k-100-30-dssp-ebghstl.dist > T0136-1-290.t2k-100-30-dssp-ebghstl-scores.rdb
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136-1-290.t2k-100-30-dssp-ebghstl-scores < T0136-1-290.t2k-100-30-dssp-ebghstl-scores.rdb > T0136-1-290.t2k-100-30-dssp-ebghstl-scores.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-100-30-stride-ebghtl < T0136-1-290.t2k-100-30-stride-ebghtl.dist > T0136-1-290.t2k-100-30-stride-ebghtl-scores.rdb
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136-1-290.t2k-100-30-stride-ebghtl-scores < T0136-1-290.t2k-100-30-stride-ebghtl-scores.rdb > T0136-1-290.t2k-100-30-stride-ebghtl-scores.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated amino acid/DSSP EBGHSTL two-track target model scores" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl-scores.html \
	T0136-1-290.t2k-100-30-dssp-ebghstl-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated amino acid/STRIDE EBGHTL two-track target model scores" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl-scores.html \
	T0136-1-290.t2k-100-30-stride-ebghtl-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore T0136-1-290.t2k-w0.5 \
-calibrate 1  \
-i T0136-1-290.t2k-w0.5.mod \
-db /projects/compbio/experiments/models.97/indexes/t2k.x-seqs \
-sw 2 -dpstyle 0  -subtract_null 4 \
-select_score 0 \
-trackprior rsdb-comp2.32comp
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Creating calibrated model library T0136-1-290.t2k-w0.5.mlib (calibrate = 1).
Scoring model T0136-1-290.t2k-w0.5.mod
Calibrating to sequence database.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.866933
Model T0136-1-290.t2k-w0.5.mod calibrated to tau=0.7763 and lambda=1.8896
Database has 6078 sequences with 1431381 residues.
rm -f T0136-1-290.t2k-w0.5.dist
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore T0136-1-290.t2k-w0.5 \
-modellibrary T0136-1-290.t2k-w0.5.mlib \
-db /projects/compbio/data/pdb/all-protein \
-dbsize 6014 \
-select_score 4 -Emax 40.
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
....................................
Average NLL-Simple NULL score:        -10.641184
Database has 35092 sequences with 8011495 residues.
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_target_scores t2k-w0.5 < T0136-1-290.t2k-w0.5.dist > T0136-1-290.t2k-w0.5-scores.rdb
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136-1-290.t2k-w0.5-scores < T0136-1-290.t2k-w0.5-scores.rdb > T0136-1-290.t2k-w0.5-scores.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated amino acid single-track target model scores of PDB" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-w0.5-scores.html \
	T0136-1-290.t2k-w0.5-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Template model scores" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore.new T0136-1-290-template-lib -modellibrary /projects/compbio/experiments/models.97/indexes/t2k-w0.5-db.mlib \
-db_size 6014 \
-db T0136-1-290.a2m -rdb 1 \
-select_score 4 -Emax 40
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore.new v3.3.2 (February, 2001) compiled 04/08/02_14:32:58
Found found modlib 1 /projects/compbio/experiments/models.97/indexes/t2k-w0.5-db.mlib
Opening T0136-1-290-template-lib.dist-rdb for RDB distance output
/projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-w0.5.mod(22):  Reading nostruct-align/1kwfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22568/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-w0.5.mod (nostruct-align/1kwfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Track 0 FIMs added (geometric mean of match probabilities (6))
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kwfA/nostruct-align/1kwfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.202908
/projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t2k-w0.5.mod(21):  Reading nostruct-align/1qgrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-30082/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t2k-w0.5.mod (nostruct-align/1qgrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.486874
/projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t2k-w0.5.mod(22):  Reading nostruct-align/2pil.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26804/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t2k-w0.5.mod (nostruct-align/2pil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.175873
/projects/compbio/experiments/models.97/pdb/1q/1qgrB/nostruct-align/1qgrB.t2k-w0.5.mod(22):  Reading nostruct-align/1qgrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12173/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgrB/nostruct-align/1qgrB.t2k-w0.5.mod (nostruct-align/1qgrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgrB/nostruct-align/1qgrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.188885
/projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t2k-w0.5.mod(21):  Reading nostruct-align/1dtyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3231/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t2k-w0.5.mod (nostruct-align/1dtyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.422911
/projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-w0.5.mod(22):  Reading nostruct-align/1aquA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-8518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-w0.5.mod (nostruct-align/1aquA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.923864
/projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-w0.5.mod(22):  Reading nostruct-align/1vcaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6947/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-w0.5.mod (nostruct-align/1vcaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.042889
/projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t2k-w0.5.mod(21):  Reading nostruct-align/1bo9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t2k-w0.5.mod (nostruct-align/1bo9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.926865
/projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t2k-w0.5.mod(21):  Reading nostruct-align/3hhrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-11870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t2k-w0.5.mod (nostruct-align/3hhrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.510900
/projects/compbio/experiments/models.97/pdb/1j/1jlnA/nostruct-align/1jlnA.t2k-w0.5.mod(22):  Reading nostruct-align/1jlnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jlnA/nostruct-align/1jlnA.t2k-w0.5.mod (nostruct-align/1jlnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jlnA/nostruct-align/1jlnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.824896
/projects/compbio/experiments/models.97/pdb/1j/1j9lA/nostruct-align/1j9lA.t2k-w0.5.mod(22):  Reading nostruct-align/1j9lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-762/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9lA/nostruct-align/1j9lA.t2k-w0.5.mod (nostruct-align/1j9lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j9lA/nostruct-align/1j9lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.289900
/projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k-w0.5.mod(22):  Reading nostruct-align/1g6hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k-w0.5.mod (nostruct-align/1g6hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6hA/nostruct-align/1g6hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.079868
/projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t2k-w0.5.mod(21):  Reading nostruct-align/1budA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t2k-w0.5.mod (nostruct-align/1budA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.335852
/projects/compbio/experiments/models.97/pdb/5l/5ldh/nostruct-align/5ldh.t2k-w0.5.mod(21):  Reading nostruct-align/5ldh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5l/5ldh/nostruct-align/5ldh.t2k-w0.5.mod (nostruct-align/5ldh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5l/5ldh/nostruct-align/5ldh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.508869
/projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t2k-w0.5.mod(21):  Reading nostruct-align/8ohm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-18237/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t2k-w0.5.mod (nostruct-align/8ohm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.104877
/projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t2k-w0.5.mod(22):  Reading nostruct-align/1eblA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-21711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t2k-w0.5.mod (nostruct-align/1eblA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.423885
/projects/compbio/experiments/models.97/pdb/1e/1eblB/nostruct-align/1eblB.t2k-w0.5.mod(22):  Reading nostruct-align/1eblB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22698/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eblB/nostruct-align/1eblB.t2k-w0.5.mod (nostruct-align/1eblB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eblB/nostruct-align/1eblB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.434891
/projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t2k-w0.5.mod(21):  Reading nostruct-align/1gr2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8125/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t2k-w0.5.mod (nostruct-align/1gr2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.048878
/projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t2k-w0.5.mod(21):  Reading nostruct-align/1tdj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21682/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t2k-w0.5.mod (nostruct-align/1tdj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.300873
/projects/compbio/experiments/models.97/pdb/1e/1ek4A/nostruct-align/1ek4A.t2k-w0.5.mod(21):  Reading nostruct-align/1ek4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek4A/nostruct-align/1ek4A.t2k-w0.5.mod (nostruct-align/1ek4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ek4A/nostruct-align/1ek4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.763889
/projects/compbio/experiments/models.97/pdb/1f/1f48A/nostruct-align/1f48A.t2k-w0.5.mod(21):  Reading nostruct-align/1f48A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17689/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f48A/nostruct-align/1f48A.t2k-w0.5.mod (nostruct-align/1f48A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f48A/nostruct-align/1f48A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.168858
/projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t2k-w0.5.mod(21):  Reading nostruct-align/1ndoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22301/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t2k-w0.5.mod (nostruct-align/1ndoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.829861
/projects/compbio/experiments/models.97/pdb/1a/1as4A/nostruct-align/1as4A.t2k-w0.5.mod(22):  Reading nostruct-align/1as4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4947/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1as4A/nostruct-align/1as4A.t2k-w0.5.mod (nostruct-align/1as4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1as4A/nostruct-align/1as4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.747850
/projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t2k-w0.5.mod(21):  Reading nostruct-align/1ndoB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t2k-w0.5.mod (nostruct-align/1ndoB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.928875
/projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t2k-w0.5.mod(21):  Reading nostruct-align/1erd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t2k-w0.5.mod (nostruct-align/1erd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.665884
/projects/compbio/experiments/models.97/pdb/1c/1c14A/nostruct-align/1c14A.t2k-w0.5.mod(21):  Reading nostruct-align/1c14A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c14A/nostruct-align/1c14A.t2k-w0.5.mod (nostruct-align/1c14A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c14A/nostruct-align/1c14A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.342894
/projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t2k-w0.5.mod(22):  Reading nostruct-align/1as4B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4120/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t2k-w0.5.mod (nostruct-align/1as4B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.051855
/projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t2k-w0.5.mod(22):  Reading nostruct-align/1vcbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8417/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t2k-w0.5.mod (nostruct-align/1vcbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.470898
/projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t2k-w0.5.mod(21):  Reading nostruct-align/1vcbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-20321/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t2k-w0.5.mod (nostruct-align/1vcbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.983864
/projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t2k-w0.5.mod(22):  Reading nostruct-align/1vcbC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19189/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t2k-w0.5.mod (nostruct-align/1vcbC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.839884
/projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t2k-w0.5.mod(22):  Reading nostruct-align/1cjaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7838/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t2k-w0.5.mod (nostruct-align/1cjaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.824890
/projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t2k-w0.5.mod(21):  Reading nostruct-align/1erp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-21851/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t2k-w0.5.mod (nostruct-align/1erp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.454859
/projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t2k-w0.5.mod(22):  Reading nostruct-align/1bueA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25651/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t2k-w0.5.mod (nostruct-align/1bueA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.637896
/projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t2k-w0.5.mod(22):  Reading nostruct-align/1ebmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27978/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t2k-w0.5.mod (nostruct-align/1ebmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.338903
/projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t2k-w0.5.mod(22):  Reading nostruct-align/1a0aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t2k-w0.5.mod (nostruct-align/1a0aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.361887
/projects/compbio/experiments/models.97/pdb/1i/1iawA/nostruct-align/1iawA.t2k-w0.5.mod(22):  Reading nostruct-align/1iawA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30261/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iawA/nostruct-align/1iawA.t2k-w0.5.mod (nostruct-align/1iawA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iawA/nostruct-align/1iawA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.591906
/projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t2k-w0.5.mod(21):  Reading nostruct-align/1erv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24202/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t2k-w0.5.mod (nostruct-align/1erv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.382912
/projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t2k-w0.5.mod(21):  Reading nostruct-align/1cqkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25801/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t2k-w0.5.mod (nostruct-align/1cqkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.341854
/projects/compbio/experiments/models.97/pdb/1g/1gpuA/nostruct-align/1gpuA.t2k-w0.5.mod(22):  Reading nostruct-align/1gpuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-26879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpuA/nostruct-align/1gpuA.t2k-w0.5.mod (nostruct-align/1gpuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpuA/nostruct-align/1gpuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.804909
/projects/compbio/experiments/models.97/pdb/1g/1gr3A/nostruct-align/1gr3A.t2k-w0.5.mod(22):  Reading nostruct-align/1gr3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gr3A/nostruct-align/1gr3A.t2k-w0.5.mod (nostruct-align/1gr3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gr3A/nostruct-align/1gr3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.393883
/projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-w0.5.mod(21):  Reading nostruct-align/1erw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-11485/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-w0.5.mod (nostruct-align/1erw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1erw/nostruct-align/1erw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.069902
/projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t2k-w0.5.mod(21):  Reading nostruct-align/3egf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29675/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t2k-w0.5.mod (nostruct-align/3egf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.640882
/projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t2k-w0.5.mod(21):  Reading nostruct-align/1ery.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25559/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t2k-w0.5.mod (nostruct-align/1ery.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.429892
/projects/compbio/experiments/models.97/pdb/1h/1hn9A/nostruct-align/1hn9A.t2k-w0.5.mod(21):  Reading nostruct-align/1hn9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12716/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hn9A/nostruct-align/1hn9A.t2k-w0.5.mod (nostruct-align/1hn9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hn9A/nostruct-align/1hn9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.468887
/projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t2k-w0.5.mod(21):  Reading nostruct-align/1lldA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-10484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t2k-w0.5.mod (nostruct-align/1lldA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.828861
/projects/compbio/experiments/models.97/pdb/1e/1eiwA/nostruct-align/1eiwA.t2k-w0.5.mod(21):  Reading nostruct-align/1eiwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-27291/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eiwA/nostruct-align/1eiwA.t2k-w0.5.mod (nostruct-align/1eiwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eiwA/nostruct-align/1eiwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.906897
/projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-w0.5.mod(22):  Reading nostruct-align/1e6uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13462/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-w0.5.mod (nostruct-align/1e6uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6uA/nostruct-align/1e6uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.193892
/projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-w0.5.mod(21):  Reading nostruct-align/1ten.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23763/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-w0.5.mod (nostruct-align/1ten.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.195877
/projects/compbio/experiments/models.97/pdb/1k/1kwhA/nostruct-align/1kwhA.t2k-w0.5.mod(22):  Reading nostruct-align/1kwhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3786/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwhA/nostruct-align/1kwhA.t2k-w0.5.mod (nostruct-align/1kwhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kwhA/nostruct-align/1kwhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.364904
/projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t2k-w0.5.mod(21):  Reading nostruct-align/1qgtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-6052/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t2k-w0.5.mod (nostruct-align/1qgtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.146868
/projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t2k-w0.5.mod(21):  Reading nostruct-align/1b3qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-3770/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t2k-w0.5.mod (nostruct-align/1b3qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.699875
/projects/compbio/experiments/models.97/pdb/1t/1ter/nostruct-align/1ter.t2k-w0.5.mod(21):  Reading nostruct-align/1ter.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-16276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ter/nostruct-align/1ter.t2k-w0.5.mod (nostruct-align/1ter.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1ter/nostruct-align/1ter.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.651897
/projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t2k-w0.5.mod(22):  Reading nostruct-align/1esc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5885/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t2k-w0.5.mod (nostruct-align/1esc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.017906
/projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t2k-w0.5.mod(22):  Reading nostruct-align/1prxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2727/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t2k-w0.5.mod (nostruct-align/1prxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.521906
/projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t2k-w0.5.mod(22):  Reading nostruct-align/1prxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t2k-w0.5.mod (nostruct-align/1prxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.473860
/projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-w0.5.mod(21):  Reading nostruct-align/2ayh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9234/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-w0.5.mod (nostruct-align/2ayh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.991879
/projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t2k-w0.5.mod(21):  Reading nostruct-align/1esl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2482/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t2k-w0.5.mod (nostruct-align/1esl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.617878
/projects/compbio/experiments/models.97/pdb/1c/1cjbA/nostruct-align/1cjbA.t2k-w0.5.mod(21):  Reading nostruct-align/1cjbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjbA/nostruct-align/1cjbA.t2k-w0.5.mod (nostruct-align/1cjbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cjbA/nostruct-align/1cjbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.545876
/projects/compbio/experiments/models.97/pdb/1k/1khvA/nostruct-align/1khvA.t2k-w0.5.mod(22):  Reading nostruct-align/1khvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-18013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khvA/nostruct-align/1khvA.t2k-w0.5.mod (nostruct-align/1khvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1khvA/nostruct-align/1khvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.632853
/projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t2k-w0.5.mod(21):  Reading nostruct-align/1eso.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-8937/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t2k-w0.5.mod (nostruct-align/1eso.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.991899
/projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t2k-w0.5.mod(21):  Reading nostruct-align/1ftpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-28774/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t2k-w0.5.mod (nostruct-align/1ftpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.844860
/projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t2k-w0.5.mod(22):  Reading nostruct-align/2ahjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13656/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t2k-w0.5.mod (nostruct-align/2ahjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.316862
/projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t2k-w0.5.mod(22):  Reading nostruct-align/2ahjB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t2k-w0.5.mod (nostruct-align/2ahjB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.643866
/projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t2k-w0.5.mod(21):  Reading nostruct-align/1tfb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t2k-w0.5.mod (nostruct-align/1tfb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.681902
/projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t2k-w0.5.mod(22):  Reading nostruct-align/2ahjC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t2k-w0.5.mod (nostruct-align/2ahjC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.324898
/projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-w0.5.mod(21):  Reading nostruct-align/1nscA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18209/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-w0.5.mod (nostruct-align/1nscA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.758873
/projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ic6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1446/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k-w0.5.mod (nostruct-align/1ic6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ic6A/nostruct-align/1ic6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.099863
/projects/compbio/experiments/models.97/pdb/2b/2bdpA/nostruct-align/2bdpA.t2k-w0.5.mod(21):  Reading nostruct-align/2bdpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-6479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bdpA/nostruct-align/2bdpA.t2k-w0.5.mod (nostruct-align/2bdpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bdpA/nostruct-align/2bdpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.116865
/projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-w0.5.mod(22):  Reading nostruct-align/1tfe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-971/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-w0.5.mod (nostruct-align/1tfe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.137869
/projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t2k-w0.5.mod(22):  Reading nostruct-align/2plc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17675/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t2k-w0.5.mod (nostruct-align/2plc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.570883
/projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t2k-w0.5.mod(21):  Reading nostruct-align/1tfg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24274/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t2k-w0.5.mod (nostruct-align/1tfg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.921898
/projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t2k-w0.5.mod(21):  Reading nostruct-align/1do0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t2k-w0.5.mod (nostruct-align/1do0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.250875
/projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t2k-w0.5.mod(21):  Reading nostruct-align/1tfi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17405/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t2k-w0.5.mod (nostruct-align/1tfi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.671856
/projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ek6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-w0.5.mod (nostruct-align/1ek6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ek6A/nostruct-align/1ek6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.538876
/projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t2k-w0.5.mod(21):  Reading nostruct-align/1cz4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-26499/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t2k-w0.5.mod (nostruct-align/1cz4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.293877
/projects/compbio/experiments/models.97/pdb/1c/1cxvA/nostruct-align/1cxvA.t2k-w0.5.mod(21):  Reading nostruct-align/1cxvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-16008/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxvA/nostruct-align/1cxvA.t2k-w0.5.mod (nostruct-align/1cxvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxvA/nostruct-align/1cxvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.731876
/projects/compbio/experiments/models.97/pdb/1b/1bftA/nostruct-align/1bftA.t2k-w0.5.mod(22):  Reading nostruct-align/1bftA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27149/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bftA/nostruct-align/1bftA.t2k-w0.5.mod (nostruct-align/1bftA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bftA/nostruct-align/1bftA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.863852
/projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t2k-w0.5.mod(21):  Reading nostruct-align/1qguA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-24950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t2k-w0.5.mod (nostruct-align/1qguA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.984867
/projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t2k-w0.5.mod(21):  Reading nostruct-align/1b3rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-8877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t2k-w0.5.mod (nostruct-align/1b3rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.834869
/projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t2k-w0.5.mod(21):  Reading nostruct-align/1qguB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2091/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t2k-w0.5.mod (nostruct-align/1qguB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.983891
/projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t2k-w0.5.mod(22):  Reading nostruct-align/1tfr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t2k-w0.5.mod (nostruct-align/1tfr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.605892
/projects/compbio/experiments/models.97/pdb/1e/1etc/nostruct-align/1etc.t2k-w0.5.mod(21):  Reading nostruct-align/1etc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-28655/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etc/nostruct-align/1etc.t2k-w0.5.mod (nostruct-align/1etc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1etc/nostruct-align/1etc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.244892
/projects/compbio/experiments/models.97/pdb/1t/1tfs/nostruct-align/1tfs.t2k-w0.5.mod(21):  Reading nostruct-align/1tfs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30494/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfs/nostruct-align/1tfs.t2k-w0.5.mod (nostruct-align/1tfs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfs/nostruct-align/1tfs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.112858
/projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t2k-w0.5.mod(22):  Reading nostruct-align/2plt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-6476/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t2k-w0.5.mod (nostruct-align/2plt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.252855
/projects/compbio/experiments/models.97/pdb/3p/3pghA/nostruct-align/3pghA.t2k-w0.5.mod(21):  Reading nostruct-align/3pghA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5444/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pghA/nostruct-align/3pghA.t2k-w0.5.mod (nostruct-align/3pghA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pghA/nostruct-align/3pghA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.021858
/projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t2k-w0.5.mod(22):  Reading nostruct-align/1cjcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-1500/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t2k-w0.5.mod (nostruct-align/1cjcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.912870
/projects/compbio/experiments/models.97/pdb/1a/1ayaA/nostruct-align/1ayaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ayaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayaA/nostruct-align/1ayaA.t2k-w0.5.mod (nostruct-align/1ayaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayaA/nostruct-align/1ayaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.695858
/projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t2k-w0.5.mod(22):  Reading nostruct-align/4pah.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29683/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t2k-w0.5.mod (nostruct-align/4pah.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.824903
/projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t2k-w0.5.mod(22):  Reading nostruct-align/3mddA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-15613/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t2k-w0.5.mod (nostruct-align/3mddA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.122873
/projects/compbio/experiments/models.97/pdb/1e/1exkA/nostruct-align/1exkA.t2k-w0.5.mod(21):  Reading nostruct-align/1exkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29984/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exkA/nostruct-align/1exkA.t2k-w0.5.mod (nostruct-align/1exkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exkA/nostruct-align/1exkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.447866
/projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-w0.5.mod(22):  Reading nostruct-align/1d3gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4727/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-w0.5.mod (nostruct-align/1d3gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d3gA/nostruct-align/1d3gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.305887
/projects/compbio/experiments/models.97/pdb/6a/6acn/nostruct-align/6acn.t2k-w0.5.mod(21):  Reading nostruct-align/6acn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-32419/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6a/6acn/nostruct-align/6acn.t2k-w0.5.mod (nostruct-align/6acn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6a/6acn/nostruct-align/6acn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.257906
/projects/compbio/experiments/models.97/pdb/1e/1etu/nostruct-align/1etu.t2k-w0.5.mod(22):  Reading nostruct-align/1etu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etu/nostruct-align/1etu.t2k-w0.5.mod (nostruct-align/1etu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1etu/nostruct-align/1etu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.649879
/projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t2k-w0.5.mod(21):  Reading nostruct-align/1a0cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t2k-w0.5.mod (nostruct-align/1a0cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.160879
/projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-w0.5.mod(22):  Reading nostruct-align/1cqmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26624/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-w0.5.mod (nostruct-align/1cqmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqmA/nostruct-align/1cqmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.136896
/projects/compbio/experiments/models.97/pdb/1i/1i05A/nostruct-align/1i05A.t2k-w0.5.mod(21):  Reading nostruct-align/1i05A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21356/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i05A/nostruct-align/1i05A.t2k-w0.5.mod (nostruct-align/1i05A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i05A/nostruct-align/1i05A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.856874
/projects/compbio/experiments/models.97/pdb/1g/1gpwB/nostruct-align/1gpwB.t2k-w0.5.mod(22):  Reading nostruct-align/1gpwB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21088/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpwB/nostruct-align/1gpwB.t2k-w0.5.mod (nostruct-align/1gpwB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpwB/nostruct-align/1gpwB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.683865
/projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t2k-w0.5.mod(22):  Reading nostruct-align/2cb5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3512/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t2k-w0.5.mod (nostruct-align/2cb5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.894909
/projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t2k-w0.5.mod(21):  Reading nostruct-align/1eiyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-16731/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t2k-w0.5.mod (nostruct-align/1eiyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.039864
/projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-w0.5.mod(22):  Reading nostruct-align/1iibA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7227/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-w0.5.mod (nostruct-align/1iibA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.913881
/projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-w0.5.mod(22):  Reading nostruct-align/1e85A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14726/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-w0.5.mod (nostruct-align/1e85A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e85A/nostruct-align/1e85A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.108870
/projects/compbio/experiments/models.97/pdb/1e/1e6wA/nostruct-align/1e6wA.t2k-w0.5.mod(21):  Reading nostruct-align/1e6wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27069/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6wA/nostruct-align/1e6wA.t2k-w0.5.mod (nostruct-align/1e6wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6wA/nostruct-align/1e6wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.493877
/projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t2k-w0.5.mod(21):  Reading nostruct-align/1cxwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-14518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t2k-w0.5.mod (nostruct-align/1cxwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.851862
/projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t2k-w0.5.mod(21):  Reading nostruct-align/1mhlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-7213/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t2k-w0.5.mod (nostruct-align/1mhlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.884911
/projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-w0.5.mod(22):  Reading nostruct-align/1qgvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21593/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-w0.5.mod (nostruct-align/1qgvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.857908
/projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t2k-w0.5.mod(21):  Reading nostruct-align/1mhlC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10504/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t2k-w0.5.mod (nostruct-align/1mhlC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.929897
/projects/compbio/experiments/models.97/pdb/1c/1cd9B/nostruct-align/1cd9B.t2k-w0.5.mod(22):  Reading nostruct-align/1cd9B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2067/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd9B/nostruct-align/1cd9B.t2k-w0.5.mod (nostruct-align/1cd9B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cd9B/nostruct-align/1cd9B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.806902
/projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t2k-w0.5.mod(21):  Reading nostruct-align/1cd9C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-28815/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t2k-w0.5.mod (nostruct-align/1cd9C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.918879
/projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t2k-w0.5.mod(21):  Reading nostruct-align/1kanA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6757/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t2k-w0.5.mod (nostruct-align/1kanA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.045887
/projects/compbio/experiments/models.97/pdb/1f/1fmhA/nostruct-align/1fmhA.t2k-w0.5.mod(21):  Reading nostruct-align/1fmhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-730/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmhA/nostruct-align/1fmhA.t2k-w0.5.mod (nostruct-align/1fmhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmhA/nostruct-align/1fmhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.515867
/projects/compbio/experiments/models.97/pdb/1f/1fmhB/nostruct-align/1fmhB.t2k-w0.5.mod(21):  Reading nostruct-align/1fmhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmhB/nostruct-align/1fmhB.t2k-w0.5.mod (nostruct-align/1fmhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmhB/nostruct-align/1fmhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.555872
/projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t2k-w0.5.mod(21):  Reading nostruct-align/1cjdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12083/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t2k-w0.5.mod (nostruct-align/1cjdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.407856
/projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-w0.5.mod(22):  Reading nostruct-align/1khxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-w0.5.mod (nostruct-align/1khxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1khxA/nostruct-align/1khxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.438879
/projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t2k-w0.5.mod(21):  Reading nostruct-align/3mdeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-1557/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t2k-w0.5.mod (nostruct-align/3mdeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.086859
/projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-w0.5.mod(22):  Reading nostruct-align/1g3p.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-w0.5.mod (nostruct-align/1g3p.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.164854
/projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t2k-w0.5.mod(21):  Reading nostruct-align/1c17M.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20074/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t2k-w0.5.mod (nostruct-align/1c17M.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.281898
/projects/compbio/experiments/models.97/pdb/1h/1hetA/nostruct-align/1hetA.t2k-w0.5.mod(22):  Reading nostruct-align/1hetA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-31591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hetA/nostruct-align/1hetA.t2k-w0.5.mod (nostruct-align/1hetA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hetA/nostruct-align/1hetA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.435873
/projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t2k-w0.5.mod(21):  Reading nostruct-align/1eur.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t2k-w0.5.mod (nostruct-align/1eur.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.124895
/projects/compbio/experiments/models.97/pdb/1d/1d3hA/nostruct-align/1d3hA.t2k-w0.5.mod(21):  Reading nostruct-align/1d3hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-27080/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3hA/nostruct-align/1d3hA.t2k-w0.5.mod (nostruct-align/1d3hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d3hA/nostruct-align/1d3hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.389854
/projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-w0.5.mod(22):  Reading nostruct-align/1ftrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11497/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-w0.5.mod (nostruct-align/1ftrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.024899
/projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t2k-w0.5.mod(21):  Reading nostruct-align/1buhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-1932/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t2k-w0.5.mod (nostruct-align/1buhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.058865
/projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t2k-w0.5.mod(21):  Reading nostruct-align/1eut.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23506/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t2k-w0.5.mod (nostruct-align/1eut.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.497894
/projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t2k-w0.5.mod(21):  Reading nostruct-align/1pdgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-5022/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t2k-w0.5.mod (nostruct-align/1pdgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.999851
/projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t2k-w0.5.mod(21):  Reading nostruct-align/1ebpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-18912/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t2k-w0.5.mod (nostruct-align/1ebpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.698904
/projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t2k-w0.5.mod(21):  Reading nostruct-align/1nseA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7121/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t2k-w0.5.mod (nostruct-align/1nseA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.962894
/projects/compbio/experiments/models.97/pdb/1i/1iazA/nostruct-align/1iazA.t2k-w0.5.mod(22):  Reading nostruct-align/1iazA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6363/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iazA/nostruct-align/1iazA.t2k-w0.5.mod (nostruct-align/1iazA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iazA/nostruct-align/1iazA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.655909
/projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t2k-w0.5.mod(21):  Reading nostruct-align/1euu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-27942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t2k-w0.5.mod (nostruct-align/1euu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.759874
/projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t2k-w0.5.mod(21):  Reading nostruct-align/1pdgC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-28152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t2k-w0.5.mod (nostruct-align/1pdgC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.956867
/projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t2k-w0.5.mod(21):  Reading nostruct-align/2pna.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20949/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t2k-w0.5.mod (nostruct-align/2pna.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.682875
/projects/compbio/experiments/models.97/pdb/1i/1i06A/nostruct-align/1i06A.t2k-w0.5.mod(21):  Reading nostruct-align/1i06A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-21876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i06A/nostruct-align/1i06A.t2k-w0.5.mod (nostruct-align/1i06A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i06A/nostruct-align/1i06A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.623909
/projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t2k-w0.5.mod(21):  Reading nostruct-align/1thg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-18691/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t2k-w0.5.mod (nostruct-align/1thg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.071886
/projects/compbio/experiments/models.97/pdb/1d/1dmtA/nostruct-align/1dmtA.t2k-w0.5.mod(22):  Reading nostruct-align/1dmtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5162/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmtA/nostruct-align/1dmtA.t2k-w0.5.mod (nostruct-align/1dmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmtA/nostruct-align/1dmtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.230875
/projects/compbio/experiments/models.97/pdb/1e/1ek8A/nostruct-align/1ek8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ek8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9875/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek8A/nostruct-align/1ek8A.t2k-w0.5.mod (nostruct-align/1ek8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ek8A/nostruct-align/1ek8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.527893
/projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t2k-w0.5.mod(22):  Reading nostruct-align/1h2rL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26726/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t2k-w0.5.mod (nostruct-align/1h2rL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.333851
/projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t2k-w0.5.mod(21):  Reading nostruct-align/1thm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-5226/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t2k-w0.5.mod (nostruct-align/1thm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.938868
/projects/compbio/experiments/models.97/pdb/1i/1iicA/nostruct-align/1iicA.t2k-w0.5.mod(22):  Reading nostruct-align/1iicA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20655/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iicA/nostruct-align/1iicA.t2k-w0.5.mod (nostruct-align/1iicA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iicA/nostruct-align/1iicA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.485865
/projects/compbio/experiments/models.97/pdb/1i/1i6aA/nostruct-align/1i6aA.t2k-w0.5.mod(22):  Reading nostruct-align/1i6aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7806/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6aA/nostruct-align/1i6aA.t2k-w0.5.mod (nostruct-align/1i6aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i6aA/nostruct-align/1i6aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.826887
/projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t2k-w0.5.mod(21):  Reading nostruct-align/2if1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12882/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t2k-w0.5.mod (nostruct-align/2if1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.663853
/projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t2k-w0.5.mod(22):  Reading nostruct-align/1b3tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-12475/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t2k-w0.5.mod (nostruct-align/1b3tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.145882
/projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t2k-w0.5.mod(22):  Reading nostruct-align/1qgwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1621/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t2k-w0.5.mod (nostruct-align/1qgwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.293890
/projects/compbio/experiments/models.97/pdb/1q/1qgwB/nostruct-align/1qgwB.t2k-w0.5.mod(22):  Reading nostruct-align/1qgwB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-9062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgwB/nostruct-align/1qgwB.t2k-w0.5.mod (nostruct-align/1qgwB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgwB/nostruct-align/1qgwB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.327908
/projects/compbio/experiments/models.97/pdb/1j/1jeiA/nostruct-align/1jeiA.t2k-w0.5.mod(21):  Reading nostruct-align/1jeiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17755/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeiA/nostruct-align/1jeiA.t2k-w0.5.mod (nostruct-align/1jeiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jeiA/nostruct-align/1jeiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.096907
/projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t2k-w0.5.mod(22):  Reading nostruct-align/1qgwC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t2k-w0.5.mod (nostruct-align/1qgwC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.703871
/projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t2k-w0.5.mod(21):  Reading nostruct-align/1nf1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-24317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t2k-w0.5.mod (nostruct-align/1nf1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.375896
/projects/compbio/experiments/models.97/pdb/1h/1h2rS/nostruct-align/1h2rS.t2k-w0.5.mod(22):  Reading nostruct-align/1h2rS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29853/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2rS/nostruct-align/1h2rS.t2k-w0.5.mod (nostruct-align/1h2rS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h2rS/nostruct-align/1h2rS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.226879
/projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t2k-w0.5.mod(21):  Reading nostruct-align/1as8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t2k-w0.5.mod (nostruct-align/1as8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.431854
/projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-w0.5.mod(22):  Reading nostruct-align/1aqzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-19659/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-w0.5.mod (nostruct-align/1aqzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.879908
/projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t2k-w0.5.mod(21):  Reading nostruct-align/1aqzB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17076/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t2k-w0.5.mod (nostruct-align/1aqzB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.873852
/projects/compbio/experiments/models.97/pdb/1e/1eqcA/nostruct-align/1eqcA.t2k-w0.5.mod(22):  Reading nostruct-align/1eqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqcA/nostruct-align/1eqcA.t2k-w0.5.mod (nostruct-align/1eqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eqcA/nostruct-align/1eqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.220867
/projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t2k-w0.5.mod(22):  Reading nostruct-align/1thv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t2k-w0.5.mod (nostruct-align/1thv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.412910
/projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t2k-w0.5.mod(21):  Reading nostruct-align/1thw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32031/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t2k-w0.5.mod (nostruct-align/1thw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.209885
/projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k-w0.5.mod(21):  Reading nostruct-align/1thx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k-w0.5.mod (nostruct-align/1thx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.722853
/projects/compbio/experiments/models.97/pdb/1j/1j9qA/nostruct-align/1j9qA.t2k-w0.5.mod(22):  Reading nostruct-align/1j9qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30398/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9qA/nostruct-align/1j9qA.t2k-w0.5.mod (nostruct-align/1j9qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j9qA/nostruct-align/1j9qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.460909
/projects/compbio/experiments/models.97/pdb/1e/1exmA/nostruct-align/1exmA.t2k-w0.5.mod(21):  Reading nostruct-align/1exmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31955/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exmA/nostruct-align/1exmA.t2k-w0.5.mod (nostruct-align/1exmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exmA/nostruct-align/1exmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.839907
/projects/compbio/experiments/models.97/pdb/1k/1k75A/nostruct-align/1k75A.t2k-w0.5.mod(22):  Reading nostruct-align/1k75A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22321/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k75A/nostruct-align/1k75A.t2k-w0.5.mod (nostruct-align/1k75A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k75A/nostruct-align/1k75A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.730900
/projects/compbio/experiments/models.97/pdb/1h/1heuA/nostruct-align/1heuA.t2k-w0.5.mod(22):  Reading nostruct-align/1heuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1heuA/nostruct-align/1heuA.t2k-w0.5.mod (nostruct-align/1heuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1heuA/nostruct-align/1heuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.442892
/projects/compbio/experiments/models.97/pdb/1h/1hg3A/nostruct-align/1hg3A.t2k-w0.5.mod(21):  Reading nostruct-align/1hg3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13908/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg3A/nostruct-align/1hg3A.t2k-w0.5.mod (nostruct-align/1hg3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hg3A/nostruct-align/1hg3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.513851
/projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t2k-w0.5.mod(21):  Reading nostruct-align/1tia.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-18104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t2k-w0.5.mod (nostruct-align/1tia.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.546898
/projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t2k-w0.5.mod(21):  Reading nostruct-align/1tib.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26483/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t2k-w0.5.mod (nostruct-align/1tib.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.224865
/projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t2k-w0.5.mod(21):  Reading nostruct-align/1tcrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t2k-w0.5.mod (nostruct-align/1tcrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.107904
/projects/compbio/experiments/models.97/pdb/1f/1fv1C/nostruct-align/1fv1C.t2k-w0.5.mod(22):  Reading nostruct-align/1fv1C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12820/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fv1C/nostruct-align/1fv1C.t2k-w0.5.mod (nostruct-align/1fv1C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fv1C/nostruct-align/1fv1C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.831856
/projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t2k-w0.5.mod(21):  Reading nostruct-align/1tie.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-1664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t2k-w0.5.mod (nostruct-align/1tie.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.992863
/projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k-w0.5.mod(21):  Reading nostruct-align/1i07A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21552/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k-w0.5.mod (nostruct-align/1i07A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i07A/nostruct-align/1i07A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.438852
/projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-w0.5.mod(22):  Reading nostruct-align/1tif.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-w0.5.mod (nostruct-align/1tif.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.260880
/projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t2k-w0.5.mod(22):  Reading nostruct-align/1rrpB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2937/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t2k-w0.5.mod (nostruct-align/1rrpB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.365908
/projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t2k-w0.5.mod(22):  Reading nostruct-align/1tig.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4467/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t2k-w0.5.mod (nostruct-align/1tig.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.508896
/projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t2k-w0.5.mod(22):  Reading nostruct-align/1dmuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t2k-w0.5.mod (nostruct-align/1dmuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.105892
/projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t2k-w0.5.mod(21):  Reading nostruct-align/1ajqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-29000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t2k-w0.5.mod (nostruct-align/1ajqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.257900
/projects/compbio/experiments/models.97/pdb/1l/1l9fA/nostruct-align/1l9fA.t2k-w0.5.mod(22):  Reading nostruct-align/1l9fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6735/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l9fA/nostruct-align/1l9fA.t2k-w0.5.mod (nostruct-align/1l9fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l9fA/nostruct-align/1l9fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.420879
/projects/compbio/experiments/models.97/pdb/1e/1ek9A/nostruct-align/1ek9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ek9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek9A/nostruct-align/1ek9A.t2k-w0.5.mod (nostruct-align/1ek9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ek9A/nostruct-align/1ek9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.985910
/projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t2k-w0.5.mod(21):  Reading nostruct-align/1ajqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-17510/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t2k-w0.5.mod (nostruct-align/1ajqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.986902
/projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-w0.5.mod(21):  Reading nostruct-align/1e87A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16383/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-w0.5.mod (nostruct-align/1e87A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e87A/nostruct-align/1e87A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.240887
/projects/compbio/experiments/models.97/pdb/1e/1e6yA/nostruct-align/1e6yA.t2k-w0.5.mod(22):  Reading nostruct-align/1e6yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10176/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6yA/nostruct-align/1e6yA.t2k-w0.5.mod (nostruct-align/1e6yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6yA/nostruct-align/1e6yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.066898
/projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k-w0.5.mod(21):  Reading nostruct-align/1cxyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-22236/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k-w0.5.mod (nostruct-align/1cxyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.435892
/projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t2k-w0.5.mod(21):  Reading nostruct-align/1tin.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-25981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t2k-w0.5.mod (nostruct-align/1tin.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.903879
/projects/compbio/experiments/models.97/pdb/1e/1e6yB/nostruct-align/1e6yB.t2k-w0.5.mod(21):  Reading nostruct-align/1e6yB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6yB/nostruct-align/1e6yB.t2k-w0.5.mod (nostruct-align/1e6yB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6yB/nostruct-align/1e6yB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.127857
/projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t2k-w0.5.mod(21):  Reading nostruct-align/1bh5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-20936/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t2k-w0.5.mod (nostruct-align/1bh5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.127886
/projects/compbio/experiments/models.97/pdb/1e/1e6yC/nostruct-align/1e6yC.t2k-w0.5.mod(22):  Reading nostruct-align/1e6yC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5783/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6yC/nostruct-align/1e6yC.t2k-w0.5.mod (nostruct-align/1e6yC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6yC/nostruct-align/1e6yC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.384895
/projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t2k-w0.5.mod(22):  Reading nostruct-align/1b3uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2623/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t2k-w0.5.mod (nostruct-align/1b3uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.401859
/projects/compbio/experiments/models.97/pdb/1q/1qi6A/nostruct-align/1qi6A.t2k-w0.5.mod(22):  Reading nostruct-align/1qi6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qi6A/nostruct-align/1qi6A.t2k-w0.5.mod (nostruct-align/1qi6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qi6A/nostruct-align/1qi6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.252901
/projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t2k-w0.5.mod(21):  Reading nostruct-align/1qgxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12697/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t2k-w0.5.mod (nostruct-align/1qgxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.042912
/projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t2k-w0.5.mod(21):  Reading nostruct-align/1tit.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t2k-w0.5.mod (nostruct-align/1tit.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.531891
/projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t2k-w0.5.mod(21):  Reading nostruct-align/1tiu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-16506/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t2k-w0.5.mod (nostruct-align/1tiu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.531891
/projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-w0.5.mod(21):  Reading nostruct-align/2por.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6159/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-w0.5.mod (nostruct-align/2por.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.289883
/projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t2k-w0.5.mod(21):  Reading nostruct-align/1tiv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8616/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t2k-w0.5.mod (nostruct-align/1tiv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.977852
/projects/compbio/experiments/models.97/pdb/1f/1fmjA/nostruct-align/1fmjA.t2k-w0.5.mod(21):  Reading nostruct-align/1fmjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmjA/nostruct-align/1fmjA.t2k-w0.5.mod (nostruct-align/1fmjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmjA/nostruct-align/1fmjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.011890
/projects/compbio/experiments/models.97/pdb/1j/1jltA/nostruct-align/1jltA.t2k-w0.5.mod(22):  Reading nostruct-align/1jltA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jltA/nostruct-align/1jltA.t2k-w0.5.mod (nostruct-align/1jltA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jltA/nostruct-align/1jltA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.202906
/projects/compbio/experiments/models.97/pdb/1j/1jltB/nostruct-align/1jltB.t2k-w0.5.mod(22):  Reading nostruct-align/1jltB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9316/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jltB/nostruct-align/1jltB.t2k-w0.5.mod (nostruct-align/1jltB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jltB/nostruct-align/1jltB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.139877
/projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t2k-w0.5.mod(21):  Reading nostruct-align/1unkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t2k-w0.5.mod (nostruct-align/1unkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.076872
/projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t2k-w0.5.mod(22):  Reading nostruct-align/1exnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-31074/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t2k-w0.5.mod (nostruct-align/1exnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.125893
/projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t2k-w0.5.mod(22):  Reading nostruct-align/1exnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21482/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t2k-w0.5.mod (nostruct-align/1exnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.657907
/projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t2k-w0.5.mod(21):  Reading nostruct-align/1kapP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-30038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t2k-w0.5.mod (nostruct-align/1kapP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.034864
/projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t2k-w0.5.mod(21):  Reading nostruct-align/1a0fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4251/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t2k-w0.5.mod (nostruct-align/1a0fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.366896
/projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t2k-w0.5.mod(22):  Reading nostruct-align/1nsgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-6344/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t2k-w0.5.mod (nostruct-align/1nsgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.276880
/projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t2k-w0.5.mod(21):  Reading nostruct-align/2ifo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28016/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t2k-w0.5.mod (nostruct-align/2ifo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.752893
/projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t2k-w0.5.mod(21):  Reading nostruct-align/1lliA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3083/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t2k-w0.5.mod (nostruct-align/1lliA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.976883
/projects/compbio/experiments/models.97/pdb/1a/1al0B/nostruct-align/1al0B.t2k-w0.5.mod(21):  Reading nostruct-align/1al0B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-6580/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al0B/nostruct-align/1al0B.t2k-w0.5.mod (nostruct-align/1al0B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1al0B/nostruct-align/1al0B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.835901
/projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t2k-w0.5.mod(21):  Reading nostruct-align/1iieA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t2k-w0.5.mod (nostruct-align/1iieA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.846901
/projects/compbio/experiments/models.97/pdb/1i/1i6cA/nostruct-align/1i6cA.t2k-w0.5.mod(21):  Reading nostruct-align/1i6cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-32659/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6cA/nostruct-align/1i6cA.t2k-w0.5.mod (nostruct-align/1i6cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i6cA/nostruct-align/1i6cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.597908
/projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t2k-w0.5.mod(22):  Reading nostruct-align/1cxzB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14883/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t2k-w0.5.mod (nostruct-align/1cxzB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.543852
/projects/compbio/experiments/models.97/pdb/1a/1al0F/nostruct-align/1al0F.t2k-w0.5.mod(21):  Reading nostruct-align/1al0F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-15634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al0F/nostruct-align/1al0F.t2k-w0.5.mod (nostruct-align/1al0F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1al0F/nostruct-align/1al0F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.773909
/projects/compbio/experiments/models.97/pdb/1q/1qi7A/nostruct-align/1qi7A.t2k-w0.5.mod(21):  Reading nostruct-align/1qi7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qi7A/nostruct-align/1qi7A.t2k-w0.5.mod (nostruct-align/1qi7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qi7A/nostruct-align/1qi7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.126894
/projects/compbio/experiments/models.97/pdb/1a/1al0G/nostruct-align/1al0G.t2k-w0.5.mod(21):  Reading nostruct-align/1al0G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-3572/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al0G/nostruct-align/1al0G.t2k-w0.5.mod (nostruct-align/1al0G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1al0G/nostruct-align/1al0G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.735888
/projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k-w0.5.mod(22):  Reading nostruct-align/1jekA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30404/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k-w0.5.mod (nostruct-align/1jekA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jekA/nostruct-align/1jekA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.162857
/projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k-w0.5.mod(22):  Reading nostruct-align/1jekB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7402/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k-w0.5.mod (nostruct-align/1jekB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jekB/nostruct-align/1jekB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.629850
/projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t2k-w0.5.mod(21):  Reading nostruct-align/1exg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9771/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t2k-w0.5.mod (nostruct-align/1exg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.724894
/projects/compbio/experiments/models.97/pdb/1g/1g6oA/nostruct-align/1g6oA.t2k-w0.5.mod(22):  Reading nostruct-align/1g6oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2899/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6oA/nostruct-align/1g6oA.t2k-w0.5.mod (nostruct-align/1g6oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6oA/nostruct-align/1g6oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.260862
/projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-w0.5.mod(22):  Reading nostruct-align/1k77A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4735/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-w0.5.mod (nostruct-align/1k77A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k77A/nostruct-align/1k77A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.554861
/projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-w0.5.mod(22):  Reading nostruct-align/1dfmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15070/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-w0.5.mod (nostruct-align/1dfmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.519876
/projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-w0.5.mod(22):  Reading nostruct-align/2igd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3956/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-w0.5.mod (nostruct-align/2igd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.108864
/projects/compbio/experiments/models.97/pdb/1h/1hg5A/nostruct-align/1hg5A.t2k-w0.5.mod(21):  Reading nostruct-align/1hg5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg5A/nostruct-align/1hg5A.t2k-w0.5.mod (nostruct-align/1hg5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hg5A/nostruct-align/1hg5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.579863
/projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t2k-w0.5.mod(22):  Reading nostruct-align/1mai.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4630/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t2k-w0.5.mod (nostruct-align/1mai.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.500866
/projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t2k-w0.5.mod(21):  Reading nostruct-align/1mak.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t2k-w0.5.mod (nostruct-align/1mak.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.110857
/projects/compbio/experiments/models.97/pdb/1e/1ed1A/nostruct-align/1ed1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ed1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10140/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed1A/nostruct-align/1ed1A.t2k-w0.5.mod (nostruct-align/1ed1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ed1A/nostruct-align/1ed1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.710880
/projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t2k-w0.5.mod(21):  Reading nostruct-align/5eat.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26778/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t2k-w0.5.mod (nostruct-align/5eat.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.341869
/projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t2k-w0.5.mod(22):  Reading nostruct-align/4kbpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4552/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t2k-w0.5.mod (nostruct-align/4kbpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.691887
/projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t2k-w0.5.mod(21):  Reading nostruct-align/1mal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t2k-w0.5.mod (nostruct-align/1mal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.495882
/projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t2k-w0.5.mod(22):  Reading nostruct-align/1cqqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t2k-w0.5.mod (nostruct-align/1cqqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.536882
/projects/compbio/experiments/models.97/pdb/4p/4pep/nostruct-align/4pep.t2k-w0.5.mod(22):  Reading nostruct-align/4pep.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-25167/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pep/nostruct-align/4pep.t2k-w0.5.mod (nostruct-align/4pep.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4p/4pep/nostruct-align/4pep.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.672884
/projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t2k-w0.5.mod(22):  Reading nostruct-align/5eau.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9548/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t2k-w0.5.mod (nostruct-align/5eau.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.123875
/projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t2k-w0.5.mod(21):  Reading nostruct-align/1dmwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-27398/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t2k-w0.5.mod (nostruct-align/1dmwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.939886
/projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-w0.5.mod(22):  Reading nostruct-align/1ajsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26637/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-w0.5.mod (nostruct-align/1ajsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.846851
/projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t2k-w0.5.mod(21):  Reading nostruct-align/1mat.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-8474/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t2k-w0.5.mod (nostruct-align/1mat.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.072886
/projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t2k-w0.5.mod(21):  Reading nostruct-align/1maz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t2k-w0.5.mod (nostruct-align/1maz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.129860
/projects/compbio/experiments/models.97/pdb/1e/1eqfA/nostruct-align/1eqfA.t2k-w0.5.mod(21):  Reading nostruct-align/1eqfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11478/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqfA/nostruct-align/1eqfA.t2k-w0.5.mod (nostruct-align/1eqfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eqfA/nostruct-align/1eqfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.027906
/projects/compbio/experiments/models.97/pdb/1h/1htjF/nostruct-align/1htjF.t2k-w0.5.mod(22):  Reading nostruct-align/1htjF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21672/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htjF/nostruct-align/1htjF.t2k-w0.5.mod (nostruct-align/1htjF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1htjF/nostruct-align/1htjF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.644888
/projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-w0.5.mod(21):  Reading nostruct-align/1mba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-6713/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-w0.5.mod (nostruct-align/1mba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.335875
/projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t2k-w0.5.mod(21):  Reading nostruct-align/1mbd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31602/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t2k-w0.5.mod (nostruct-align/1mbd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.126854
/projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t2k-w0.5.mod(22):  Reading nostruct-align/1ayfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t2k-w0.5.mod (nostruct-align/1ayfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.992884
/projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t2k-w0.5.mod(21):  Reading nostruct-align/1mbe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t2k-w0.5.mod (nostruct-align/1mbe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.467880
/projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t2k-w0.5.mod(21):  Reading nostruct-align/1ayfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t2k-w0.5.mod (nostruct-align/1ayfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.902864
/projects/compbio/experiments/models.97/pdb/1k/1k78A/nostruct-align/1k78A.t2k-w0.5.mod(22):  Reading nostruct-align/1k78A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3033/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k78A/nostruct-align/1k78A.t2k-w0.5.mod (nostruct-align/1k78A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k78A/nostruct-align/1k78A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.049875
/projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t2k-w0.5.mod(22):  Reading nostruct-align/1dfnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t2k-w0.5.mod (nostruct-align/1dfnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.186899
/projects/compbio/experiments/models.97/pdb/4p/4pfk/nostruct-align/4pfk.t2k-w0.5.mod(21):  Reading nostruct-align/4pfk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-19227/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pfk/nostruct-align/4pfk.t2k-w0.5.mod (nostruct-align/4pfk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4p/4pfk/nostruct-align/4pfk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.020868
/projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t2k-w0.5.mod(21):  Reading nostruct-align/1a0hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-24612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t2k-w0.5.mod (nostruct-align/1a0hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.225853
/projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t2k-w0.5.mod(22):  Reading nostruct-align/1pdkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-29234/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t2k-w0.5.mod (nostruct-align/1pdkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.341879
/projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t2k-w0.5.mod(22):  Reading nostruct-align/1cs0B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3499/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t2k-w0.5.mod (nostruct-align/1cs0B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.442858
/projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t2k-w0.5.mod(21):  Reading nostruct-align/1tle.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4339/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t2k-w0.5.mod (nostruct-align/1tle.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.991909
/projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t2k-w0.5.mod(21):  Reading nostruct-align/1cs0C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18274/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t2k-w0.5.mod (nostruct-align/1cs0C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.722872
/projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t2k-w0.5.mod(21):  Reading nostruct-align/1kpeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-26217/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t2k-w0.5.mod (nostruct-align/1kpeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.743900
/projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t2k-w0.5.mod(21):  Reading nostruct-align/2ihl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-32374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t2k-w0.5.mod (nostruct-align/2ihl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.053894
/projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t2k-w0.5.mod(21):  Reading nostruct-align/1do6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23915/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t2k-w0.5.mod (nostruct-align/1do6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.569880
/projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t2k-w0.5.mod(21):  Reading nostruct-align/2prd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t2k-w0.5.mod (nostruct-align/2prd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.022863
/projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t2k-w0.5.mod(21):  Reading nostruct-align/1tlk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t2k-w0.5.mod (nostruct-align/1tlk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.652880
/projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t2k-w0.5.mod(21):  Reading nostruct-align/2prk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25564/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t2k-w0.5.mod (nostruct-align/2prk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.066868
/projects/compbio/experiments/models.97/pdb/1g/1g6q2/nostruct-align/1g6q2.t2k-w0.5.mod(21):  Reading nostruct-align/1g6q2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-8981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6q2/nostruct-align/1g6q2.t2k-w0.5.mod (nostruct-align/1g6q2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6q2/nostruct-align/1g6q2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.039907
/projects/compbio/experiments/models.97/pdb/1q/1qi9A/nostruct-align/1qi9A.t2k-w0.5.mod(22):  Reading nostruct-align/1qi9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24976/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qi9A/nostruct-align/1qi9A.t2k-w0.5.mod (nostruct-align/1qi9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qi9A/nostruct-align/1qi9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.495859
/projects/compbio/experiments/models.97/pdb/1f/1f3aA/nostruct-align/1f3aA.t2k-w0.5.mod(21):  Reading nostruct-align/1f3aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-27923/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3aA/nostruct-align/1f3aA.t2k-w0.5.mod (nostruct-align/1f3aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3aA/nostruct-align/1f3aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.691854
/projects/compbio/experiments/models.97/pdb/1t/1tn3/nostruct-align/1tn3.t2k-w0.5.mod(21):  Reading nostruct-align/1tn3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tn3/nostruct-align/1tn3.t2k-w0.5.mod (nostruct-align/1tn3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tn3/nostruct-align/1tn3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.921862
/projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t2k-w0.5.mod(21):  Reading nostruct-align/1bncA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-10431/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t2k-w0.5.mod (nostruct-align/1bncA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.312870
/projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t2k-w0.5.mod(21):  Reading nostruct-align/1bncB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-17708/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t2k-w0.5.mod (nostruct-align/1bncB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.162874
/projects/compbio/experiments/models.97/pdb/1j/1jn5A/nostruct-align/1jn5A.t2k-w0.5.mod(21):  Reading nostruct-align/1jn5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-28422/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jn5A/nostruct-align/1jn5A.t2k-w0.5.mod (nostruct-align/1jn5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jn5A/nostruct-align/1jn5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.113894
/projects/compbio/experiments/models.97/pdb/1j/1jn5B/nostruct-align/1jn5B.t2k-w0.5.mod(21):  Reading nostruct-align/1jn5B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17585/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jn5B/nostruct-align/1jn5B.t2k-w0.5.mod (nostruct-align/1jn5B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jn5B/nostruct-align/1jn5B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.010870
/projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t2k-w0.5.mod(22):  Reading nostruct-align/1ezm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16555/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t2k-w0.5.mod (nostruct-align/1ezm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.283905
/projects/compbio/experiments/models.97/pdb/1g/1gk1B/nostruct-align/1gk1B.t2k-w0.5.mod(22):  Reading nostruct-align/1gk1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21418/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk1B/nostruct-align/1gk1B.t2k-w0.5.mod (nostruct-align/1gk1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gk1B/nostruct-align/1gk1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.428902
/projects/compbio/experiments/models.97/pdb/1e/1exqA/nostruct-align/1exqA.t2k-w0.5.mod(21):  Reading nostruct-align/1exqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-16275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exqA/nostruct-align/1exqA.t2k-w0.5.mod (nostruct-align/1exqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exqA/nostruct-align/1exqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.684870
/projects/compbio/experiments/models.97/pdb/1d/1dfoA/nostruct-align/1dfoA.t2k-w0.5.mod(22):  Reading nostruct-align/1dfoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-2535/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfoA/nostruct-align/1dfoA.t2k-w0.5.mod (nostruct-align/1dfoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfoA/nostruct-align/1dfoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.949862
/projects/compbio/experiments/models.97/pdb/1h/1hg7A/nostruct-align/1hg7A.t2k-w0.5.mod(22):  Reading nostruct-align/1hg7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg7A/nostruct-align/1hg7A.t2k-w0.5.mod (nostruct-align/1hg7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hg7A/nostruct-align/1hg7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.265900
/projects/compbio/experiments/models.97/pdb/1f/1fv5A/nostruct-align/1fv5A.t2k-w0.5.mod(21):  Reading nostruct-align/1fv5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-5423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fv5A/nostruct-align/1fv5A.t2k-w0.5.mod (nostruct-align/1fv5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fv5A/nostruct-align/1fv5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.573891
/projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t2k-w0.5.mod(21):  Reading nostruct-align/1ebuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-9571/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t2k-w0.5.mod (nostruct-align/1ebuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.844877
/projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-w0.5.mod(22):  Reading nostruct-align/1cs1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15214/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-w0.5.mod (nostruct-align/1cs1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.458855
/projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k-w0.5.mod(21):  Reading nostruct-align/1sgpE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-4996/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k-w0.5.mod (nostruct-align/1sgpE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.856876
/projects/compbio/experiments/models.97/pdb/1c/1cs1C/nostruct-align/1cs1C.t2k-w0.5.mod(22):  Reading nostruct-align/1cs1C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-29887/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs1C/nostruct-align/1cs1C.t2k-w0.5.mod (nostruct-align/1cs1C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cs1C/nostruct-align/1cs1C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.509888
/projects/compbio/experiments/models.97/pdb/1q/1qb0A/nostruct-align/1qb0A.t2k-w0.5.mod(22):  Reading nostruct-align/1qb0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qb0A/nostruct-align/1qb0A.t2k-w0.5.mod (nostruct-align/1qb0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qb0A/nostruct-align/1qb0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.106880
/projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t2k-w0.5.mod(22):  Reading nostruct-align/1sgpI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t2k-w0.5.mod (nostruct-align/1sgpI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.814857
/projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t2k-w0.5.mod(21):  Reading nostruct-align/3pvaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t2k-w0.5.mod (nostruct-align/3pvaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.649899
/projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t2k-w0.5.mod(21):  Reading nostruct-align/1tml.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22598/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t2k-w0.5.mod (nostruct-align/1tml.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.149864
/projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t2k-w0.5.mod(22):  Reading nostruct-align/1bh9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1451/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t2k-w0.5.mod (nostruct-align/1bh9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.074892
/projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t2k-w0.5.mod(22):  Reading nostruct-align/1bh9B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-14280/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t2k-w0.5.mod (nostruct-align/1bh9B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.676891
/projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t2k-w0.5.mod(21):  Reading nostruct-align/1jenA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t2k-w0.5.mod (nostruct-align/1jenA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.718887
/projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t2k-w0.5.mod(21):  Reading nostruct-align/1jenB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-24831/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t2k-w0.5.mod (nostruct-align/1jenB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.867878
/projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t2k-w0.5.mod(21):  Reading nostruct-align/1bndA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-26728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t2k-w0.5.mod (nostruct-align/1bndA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.422894
/projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t2k-w0.5.mod(21):  Reading nostruct-align/1tmy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-24157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t2k-w0.5.mod (nostruct-align/1tmy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.995895
/projects/compbio/experiments/models.97/pdb/1j/1jlxA/nostruct-align/1jlxA.t2k-w0.5.mod(21):  Reading nostruct-align/1jlxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jlxA/nostruct-align/1jlxA.t2k-w0.5.mod (nostruct-align/1jlxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jlxA/nostruct-align/1jlxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.365898
/projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-w0.5.mod(22):  Reading nostruct-align/1mdc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-5039/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-w0.5.mod (nostruct-align/1mdc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.379902
/projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t2k-w0.5.mod(21):  Reading nostruct-align/2gp8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-21780/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t2k-w0.5.mod (nostruct-align/2gp8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.533899
/projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ez0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-28649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t2k-w0.5.mod (nostruct-align/1ez0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.885897
/projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k-w0.5.mod(21):  Reading nostruct-align/1exrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k-w0.5.mod (nostruct-align/1exrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exrA/nostruct-align/1exrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.614889
/projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k-w0.5.mod(22):  Reading nostruct-align/1hg8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23862/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k-w0.5.mod (nostruct-align/1hg8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hg8A/nostruct-align/1hg8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.115900
/projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t2k-w0.5.mod(21):  Reading nostruct-align/1bunB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24685/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t2k-w0.5.mod (nostruct-align/1bunB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.419874
/projects/compbio/experiments/models.97/pdb/1a/1a0jA/nostruct-align/1a0jA.t2k-w0.5.mod(21):  Reading nostruct-align/1a0jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0jA/nostruct-align/1a0jA.t2k-w0.5.mod (nostruct-align/1a0jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0jA/nostruct-align/1a0jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.213867
/projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t2k-w0.5.mod(22):  Reading nostruct-align/1mdl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3332/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t2k-w0.5.mod (nostruct-align/1mdl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.943893
/projects/compbio/experiments/models.97/pdb/1e/1e12A/nostruct-align/1e12A.t2k-w0.5.mod(21):  Reading nostruct-align/1e12A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29421/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e12A/nostruct-align/1e12A.t2k-w0.5.mod (nostruct-align/1e12A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e12A/nostruct-align/1e12A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.770891
/projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t2k-w0.5.mod(21):  Reading nostruct-align/2pta.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17191/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t2k-w0.5.mod (nostruct-align/2pta.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.216862
/projects/compbio/experiments/models.97/pdb/1k/1kpgA/nostruct-align/1kpgA.t2k-w0.5.mod(22):  Reading nostruct-align/1kpgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-2105/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpgA/nostruct-align/1kpgA.t2k-w0.5.mod (nostruct-align/1kpgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kpgA/nostruct-align/1kpgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.780861
/projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t2k-w0.5.mod(21):  Reading nostruct-align/2bb2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t2k-w0.5.mod (nostruct-align/2bb2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.304865
/projects/compbio/experiments/models.97/pdb/1d/1dmzA/nostruct-align/1dmzA.t2k-w0.5.mod(21):  Reading nostruct-align/1dmzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-32446/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmzA/nostruct-align/1dmzA.t2k-w0.5.mod (nostruct-align/1dmzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmzA/nostruct-align/1dmzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.615896
/projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t2k-w0.5.mod(21):  Reading nostruct-align/2ptd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13176/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t2k-w0.5.mod (nostruct-align/2ptd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.206909
/projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t2k-w0.5.mod(21):  Reading nostruct-align/1hmcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28383/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t2k-w0.5.mod (nostruct-align/1hmcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.535910
/projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t2k-w0.5.mod(21):  Reading nostruct-align/1hmcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2407/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t2k-w0.5.mod (nostruct-align/1hmcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.509861
/projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t2k-w0.5.mod(21):  Reading nostruct-align/1a7tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24174/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t2k-w0.5.mod (nostruct-align/1a7tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.318893
/projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-w0.5.mod(21):  Reading nostruct-align/1a92A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-9216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-w0.5.mod (nostruct-align/1a92A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.404896
/projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-w0.5.mod(22):  Reading nostruct-align/2pth.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28547/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-w0.5.mod (nostruct-align/2pth.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.731884
/projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t2k-w0.5.mod(21):  Reading nostruct-align/2bb8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17770/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t2k-w0.5.mod (nostruct-align/2bb8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.173862
/projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t2k-w0.5.mod(21):  Reading nostruct-align/1tnm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-11131/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t2k-w0.5.mod (nostruct-align/1tnm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.427891
/projects/compbio/experiments/models.97/pdb/1j/1jeoA/nostruct-align/1jeoA.t2k-w0.5.mod(22):  Reading nostruct-align/1jeoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeoA/nostruct-align/1jeoA.t2k-w0.5.mod (nostruct-align/1jeoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jeoA/nostruct-align/1jeoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.571882
/projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t2k-w0.5.mod(21):  Reading nostruct-align/2ptl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9692/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t2k-w0.5.mod (nostruct-align/2ptl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.209856
/projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t2k-w0.5.mod(21):  Reading nostruct-align/1htmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-21168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t2k-w0.5.mod (nostruct-align/1htmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.814892
/projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t2k-w0.5.mod(21):  Reading nostruct-align/3nodB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-21607/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t2k-w0.5.mod (nostruct-align/3nodB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.289850
/projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-w0.5.mod(22):  Reading nostruct-align/2baa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9432/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-w0.5.mod (nostruct-align/2baa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.573885
/projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t2k-w0.5.mod(21):  Reading nostruct-align/1tns.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t2k-w0.5.mod (nostruct-align/1tns.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.075890
/projects/compbio/experiments/models.97/pdb/2a/2aaiB/nostruct-align/2aaiB.t2k-w0.5.mod(22):  Reading nostruct-align/2aaiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27923/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aaiB/nostruct-align/2aaiB.t2k-w0.5.mod (nostruct-align/2aaiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2aaiB/nostruct-align/2aaiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.982891
/projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t2k-w0.5.mod(21):  Reading nostruct-align/1mea.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3998/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t2k-w0.5.mod (nostruct-align/1mea.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.196886
/projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t2k-w0.5.mod(22):  Reading nostruct-align/1jlyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t2k-w0.5.mod (nostruct-align/1jlyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.365898
/projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-w0.5.mod(22):  Reading nostruct-align/3lzt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-w0.5.mod (nostruct-align/3lzt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.075863
/projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-w0.5.mod(22):  Reading nostruct-align/1g6sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6386/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-w0.5.mod (nostruct-align/1g6sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6sA/nostruct-align/1g6sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.470865
/projects/compbio/experiments/models.97/pdb/1e/1ez1A/nostruct-align/1ez1A.t2k-w0.5.mod(21):  Reading nostruct-align/1ez1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23934/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ez1A/nostruct-align/1ez1A.t2k-w0.5.mod (nostruct-align/1ez1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ez1A/nostruct-align/1ez1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.525898
/projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t2k-w0.5.mod(22):  Reading nostruct-align/1buoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t2k-w0.5.mod (nostruct-align/1buoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.973873
/projects/compbio/experiments/models.97/pdb/1m/1mek/nostruct-align/1mek.t2k-w0.5.mod(21):  Reading nostruct-align/1mek.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-6135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mek/nostruct-align/1mek.t2k-w0.5.mod (nostruct-align/1mek.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mek/nostruct-align/1mek.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.460892
/projects/compbio/experiments/models.97/pdb/1e/1ed5A/nostruct-align/1ed5A.t2k-w0.5.mod(21):  Reading nostruct-align/1ed5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed5A/nostruct-align/1ed5A.t2k-w0.5.mod (nostruct-align/1ed5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ed5A/nostruct-align/1ed5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.962894
/projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t2k-w0.5.mod(21):  Reading nostruct-align/1pdnC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-3371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t2k-w0.5.mod (nostruct-align/1pdnC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.010895
/projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t2k-w0.5.mod(21):  Reading nostruct-align/1qb2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t2k-w0.5.mod (nostruct-align/1qb2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.157867
/projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t2k-w0.5.mod(21):  Reading nostruct-align/1toh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-11570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t2k-w0.5.mod (nostruct-align/1toh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.134851
/projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t2k-w0.5.mod(21):  Reading nostruct-align/1a93A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17682/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t2k-w0.5.mod (nostruct-align/1a93A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.745897
/projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t2k-w0.5.mod(21):  Reading nostruct-align/1tkaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-17480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t2k-w0.5.mod (nostruct-align/1tkaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.600855
/projects/compbio/experiments/models.97/pdb/1i/1iijA/nostruct-align/1iijA.t2k-w0.5.mod(21):  Reading nostruct-align/1iijA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-3908/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iijA/nostruct-align/1iijA.t2k-w0.5.mod (nostruct-align/1iijA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iijA/nostruct-align/1iijA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.704853
/projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t2k-w0.5.mod(21):  Reading nostruct-align/1a93B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25411/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t2k-w0.5.mod (nostruct-align/1a93B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.132906
/projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t2k-w0.5.mod(21):  Reading nostruct-align/1ton.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-11044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t2k-w0.5.mod (nostruct-align/1ton.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.715864
/projects/compbio/experiments/models.97/pdb/1j/1jepA/nostruct-align/1jepA.t2k-w0.5.mod(22):  Reading nostruct-align/1jepA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jepA/nostruct-align/1jepA.t2k-w0.5.mod (nostruct-align/1jepA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jepA/nostruct-align/1jepA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.613882
/projects/compbio/experiments/models.97/pdb/1t/1top/nostruct-align/1top.t2k-w0.5.mod(21):  Reading nostruct-align/1top.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-2481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1top/nostruct-align/1top.t2k-w0.5.mod (nostruct-align/1top.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1top/nostruct-align/1top.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.465889
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Reading nostruct-align/1eqjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod (nostruct-align/1eqjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.588888
/projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t2k-w0.5.mod(22):  Reading nostruct-align/1trkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-5607/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t2k-w0.5.mod (nostruct-align/1trkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.066889
/projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t2k-w0.5.mod(21):  Reading nostruct-align/2frvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15701/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t2k-w0.5.mod (nostruct-align/2frvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.258898
/projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t2k-w0.5.mod(22):  Reading nostruct-align/1mfa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-10679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t2k-w0.5.mod (nostruct-align/1mfa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.253860
/projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t2k-w0.5.mod(21):  Reading nostruct-align/2frvB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23078/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t2k-w0.5.mod (nostruct-align/2frvB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.927887
/projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t2k-w0.5.mod(21):  Reading nostruct-align/2ila.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-2943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t2k-w0.5.mod (nostruct-align/2ila.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.427876
/projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t2k-w0.5.mod(22):  Reading nostruct-align/1extA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-15467/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t2k-w0.5.mod (nostruct-align/1extA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.008883
/projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-w0.5.mod(22):  Reading nostruct-align/1bupA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-14843/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-w0.5.mod (nostruct-align/1bupA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.088890
/projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t2k-w0.5.mod(22):  Reading nostruct-align/3tdt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t2k-w0.5.mod (nostruct-align/3tdt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.838907
/projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-w0.5.mod(22):  Reading nostruct-align/2ilk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27850/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-w0.5.mod (nostruct-align/2ilk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.582853
/projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t2k-w0.5.mod(21):  Reading nostruct-align/1tpg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16637/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t2k-w0.5.mod (nostruct-align/1tpg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.775877
/projects/compbio/experiments/models.97/pdb/3e/3erk/nostruct-align/3erk.t2k-w0.5.mod(21):  Reading nostruct-align/3erk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-22092/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3erk/nostruct-align/3erk.t2k-w0.5.mod (nostruct-align/3erk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3erk/nostruct-align/3erk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.114906
/projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-w0.5.mod(21):  Reading nostruct-align/1mh1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-30892/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-w0.5.mod (nostruct-align/1mh1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.065876
/projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t2k-w0.5.mod(21):  Reading nostruct-align/1mfs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16807/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t2k-w0.5.mod (nostruct-align/1mfs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.632853
/projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t2k-w0.5.mod(21):  Reading nostruct-align/2bby.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-15158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t2k-w0.5.mod (nostruct-align/2bby.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.662888
/projects/compbio/experiments/models.97/pdb/1a/1a7vA/nostruct-align/1a7vA.t2k-w0.5.mod(21):  Reading nostruct-align/1a7vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7vA/nostruct-align/1a7vA.t2k-w0.5.mod (nostruct-align/1a7vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a7vA/nostruct-align/1a7vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.495909
/projects/compbio/experiments/models.97/pdb/1e/1ejaB/nostruct-align/1ejaB.t2k-w0.5.mod(21):  Reading nostruct-align/1ejaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejaB/nostruct-align/1ejaB.t2k-w0.5.mod (nostruct-align/1ejaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejaB/nostruct-align/1ejaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.621902
/projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t2k-w0.5.mod(21):  Reading nostruct-align/1tpm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-3630/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t2k-w0.5.mod (nostruct-align/1tpm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.893890
/projects/compbio/experiments/models.97/pdb/1i/1i6iA/nostruct-align/1i6iA.t2k-w0.5.mod(21):  Reading nostruct-align/1i6iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-828/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6iA/nostruct-align/1i6iA.t2k-w0.5.mod (nostruct-align/1i6iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i6iA/nostruct-align/1i6iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.171886
/projects/compbio/experiments/models.97/pdb/1j/1jeqA/nostruct-align/1jeqA.t2k-w0.5.mod(21):  Reading nostruct-align/1jeqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3274/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeqA/nostruct-align/1jeqA.t2k-w0.5.mod (nostruct-align/1jeqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jeqA/nostruct-align/1jeqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.689869
/projects/compbio/experiments/models.97/pdb/1j/1jeqB/nostruct-align/1jeqB.t2k-w0.5.mod(21):  Reading nostruct-align/1jeqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-27975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeqB/nostruct-align/1jeqB.t2k-w0.5.mod (nostruct-align/1jeqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jeqB/nostruct-align/1jeqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.771868
/projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k-w0.5.mod(22):  Reading nostruct-align/1svfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19298/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k-w0.5.mod (nostruct-align/1svfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.753868
/projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k-w0.5.mod(22):  Reading nostruct-align/1svfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24073/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k-w0.5.mod (nostruct-align/1svfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.165899
/projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t2k-w0.5.mod(21):  Reading nostruct-align/1c0aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19076/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t2k-w0.5.mod (nostruct-align/1c0aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.750872
/projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t2k-w0.5.mod(21):  Reading nostruct-align/1tpt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29124/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t2k-w0.5.mod (nostruct-align/1tpt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.078869
/projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t2k-w0.5.mod(21):  Reading nostruct-align/1r1bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t2k-w0.5.mod (nostruct-align/1r1bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.113859
/projects/compbio/experiments/models.97/pdb/1k/1kawA/nostruct-align/1kawA.t2k-w0.5.mod(21):  Reading nostruct-align/1kawA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-13898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kawA/nostruct-align/1kawA.t2k-w0.5.mod (nostruct-align/1kawA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kawA/nostruct-align/1kawA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.445868
/projects/compbio/experiments/models.97/pdb/1e/1eqkA/nostruct-align/1eqkA.t2k-w0.5.mod(21):  Reading nostruct-align/1eqkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-972/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqkA/nostruct-align/1eqkA.t2k-w0.5.mod (nostruct-align/1eqkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eqkA/nostruct-align/1eqkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.968897
/projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ir3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t2k-w0.5.mod (nostruct-align/1ir3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.954878
/projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k-w0.5.mod(22):  Reading nostruct-align/2bce.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-20011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k-w0.5.mod (nostruct-align/2bce.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.964901
/projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t2k-w0.5.mod(21):  Reading nostruct-align/1ughI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-25977/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t2k-w0.5.mod (nostruct-align/1ughI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.535875
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Reading nostruct-align/1j9yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.140903
/projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-w0.5.mod(22):  Reading nostruct-align/1c7kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-w0.5.mod (nostruct-align/1c7kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c7kA/nostruct-align/1c7kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.170866
/projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k-w0.5.mod(22):  Reading nostruct-align/1g6uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k-w0.5.mod (nostruct-align/1g6uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6uA/nostruct-align/1g6uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.367908
/projects/compbio/experiments/models.97/pdb/1e/1ez3A/nostruct-align/1ez3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ez3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1356/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ez3A/nostruct-align/1ez3A.t2k-w0.5.mod (nostruct-align/1ez3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ez3A/nostruct-align/1ez3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.433887
/projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t2k-w0.5.mod(21):  Reading nostruct-align/1dfsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-18288/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t2k-w0.5.mod (nostruct-align/1dfsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.003860
/projects/compbio/experiments/models.97/pdb/1e/1ed7A/nostruct-align/1ed7A.t2k-w0.5.mod(21):  Reading nostruct-align/1ed7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-5007/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed7A/nostruct-align/1ed7A.t2k-w0.5.mod (nostruct-align/1ed7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ed7A/nostruct-align/1ed7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.027868
/projects/compbio/experiments/models.97/pdb/1j/1jtdB/nostruct-align/1jtdB.t2k-w0.5.mod(21):  Reading nostruct-align/1jtdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-14038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtdB/nostruct-align/1jtdB.t2k-w0.5.mod (nostruct-align/1jtdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jtdB/nostruct-align/1jtdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.955894
/projects/compbio/experiments/models.97/pdb/1e/1e15A/nostruct-align/1e15A.t2k-w0.5.mod(21):  Reading nostruct-align/1e15A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2788/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e15A/nostruct-align/1e15A.t2k-w0.5.mod (nostruct-align/1e15A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e15A/nostruct-align/1e15A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.996870
/projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t2k-w0.5.mod(21):  Reading nostruct-align/1cqwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t2k-w0.5.mod (nostruct-align/1cqwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.587852
/projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t2k-w0.5.mod(21):  Reading nostruct-align/1mgn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-23876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t2k-w0.5.mod (nostruct-align/1mgn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.131876
/projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t2k-w0.5.mod(21):  Reading nostruct-align/1ajyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20744/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t2k-w0.5.mod (nostruct-align/1ajyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.618866
/projects/compbio/experiments/models.97/pdb/1e/1ejbA/nostruct-align/1ejbA.t2k-w0.5.mod(22):  Reading nostruct-align/1ejbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13730/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejbA/nostruct-align/1ejbA.t2k-w0.5.mod (nostruct-align/1ejbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejbA/nostruct-align/1ejbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.060904
/projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-w0.5.mod(22):  Reading nostruct-align/1ugiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-w0.5.mod (nostruct-align/1ugiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.586885
/projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-w0.5.mod(22):  Reading nostruct-align/8abp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8299/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-w0.5.mod (nostruct-align/8abp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.657854
/projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t2k-w0.5.mod(21):  Reading nostruct-align/1pscA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12997/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t2k-w0.5.mod (nostruct-align/1pscA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.363869
/projects/compbio/experiments/models.97/pdb/1k/1kc6A/nostruct-align/1kc6A.t2k-w0.5.mod(22):  Reading nostruct-align/1kc6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18407/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kc6A/nostruct-align/1kc6A.t2k-w0.5.mod (nostruct-align/1kc6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kc6A/nostruct-align/1kc6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.855898
/projects/compbio/experiments/models.97/pdb/1k/1k04A/nostruct-align/1k04A.t2k-w0.5.mod(22):  Reading nostruct-align/1k04A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10124/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k04A/nostruct-align/1k04A.t2k-w0.5.mod (nostruct-align/1k04A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k04A/nostruct-align/1k04A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.758894
/projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t2k-w0.5.mod(21):  Reading nostruct-align/1qoiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12592/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t2k-w0.5.mod (nostruct-align/1qoiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.845865
/projects/compbio/experiments/models.97/pdb/1f/1fo0A/nostruct-align/1fo0A.t2k-w0.5.mod(22):  Reading nostruct-align/1fo0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo0A/nostruct-align/1fo0A.t2k-w0.5.mod (nostruct-align/1fo0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fo0A/nostruct-align/1fo0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.869867
/projects/compbio/experiments/models.97/pdb/1f/1fo0B/nostruct-align/1fo0B.t2k-w0.5.mod(21):  Reading nostruct-align/1fo0B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo0B/nostruct-align/1fo0B.t2k-w0.5.mod (nostruct-align/1fo0B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fo0B/nostruct-align/1fo0B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.794878
/projects/compbio/experiments/models.97/pdb/1g/1g84A/nostruct-align/1g84A.t2k-w0.5.mod(21):  Reading nostruct-align/1g84A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-16063/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g84A/nostruct-align/1g84A.t2k-w0.5.mod (nostruct-align/1g84A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g84A/nostruct-align/1g84A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.500856
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Reading nostruct-align/1bw0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod (nostruct-align/1bw0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.249868
/projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t2k-w0.5.mod(21):  Reading nostruct-align/1trb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-21567/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t2k-w0.5.mod (nostruct-align/1trb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.336851
/projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ed8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1932/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-w0.5.mod (nostruct-align/1ed8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ed8A/nostruct-align/1ed8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.581886
/projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-w0.5.mod(21):  Reading nostruct-align/1cs6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-6391/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-w0.5.mod (nostruct-align/1cs6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cs6A/nostruct-align/1cs6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -35.740910
/projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-w0.5.mod(21):  Reading nostruct-align/1cqxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-13424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-w0.5.mod (nostruct-align/1cqxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.631863
/projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t2k-w0.5.mod(21):  Reading nostruct-align/1ibcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-29681/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t2k-w0.5.mod (nostruct-align/1ibcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.230906
/projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t2k-w0.5.mod(21):  Reading nostruct-align/2bds.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8476/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t2k-w0.5.mod (nostruct-align/2bds.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.166889
/projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t2k-w0.5.mod(21):  Reading nostruct-align/1ibcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t2k-w0.5.mod (nostruct-align/1ibcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.549870
/projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t2k-w0.5.mod(21):  Reading nostruct-align/1mho.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24583/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t2k-w0.5.mod (nostruct-align/1mho.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.985905
/projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t2k-w0.5.mod(21):  Reading nostruct-align/1mhu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t2k-w0.5.mod (nostruct-align/1mhu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.011873
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Reading nostruct-align/1nzyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -36.445889
/projects/compbio/experiments/models.97/pdb/1e/1e7aA/nostruct-align/1e7aA.t2k-w0.5.mod(22):  Reading nostruct-align/1e7aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11332/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7aA/nostruct-align/1e7aA.t2k-w0.5.mod (nostruct-align/1e7aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e7aA/nostruct-align/1e7aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.168886
/projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t2k-w0.5.mod(21):  Reading nostruct-align/1aym1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11866/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t2k-w0.5.mod (nostruct-align/1aym1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.167856
/projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t2k-w0.5.mod(21):  Reading nostruct-align/1aym2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26762/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t2k-w0.5.mod (nostruct-align/1aym2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.876865
/projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t2k-w0.5.mod(21):  Reading nostruct-align/4icb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-7295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t2k-w0.5.mod (nostruct-align/4icb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.503874
/projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t2k-w0.5.mod(21):  Reading nostruct-align/2int.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2902/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t2k-w0.5.mod (nostruct-align/2int.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.275896
/projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t2k-w0.5.mod(21):  Reading nostruct-align/1aym3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-9361/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t2k-w0.5.mod (nostruct-align/1aym3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.145884
/projects/compbio/experiments/models.97/pdb/1a/1aym4/nostruct-align/1aym4.t2k-w0.5.mod(22):  Reading nostruct-align/1aym4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26372/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aym4/nostruct-align/1aym4.t2k-w0.5.mod (nostruct-align/1aym4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aym4/nostruct-align/1aym4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.815895
/projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-w0.5.mod(22):  Reading nostruct-align/1jg1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31010/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-w0.5.mod (nostruct-align/1jg1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jg1A/nostruct-align/1jg1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.834885
/projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t2k-w0.5.mod(21):  Reading nostruct-align/1dugA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t2k-w0.5.mod (nostruct-align/1dugA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.816862
/projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t2k-w0.5.mod(21):  Reading nostruct-align/8acn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-17238/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t2k-w0.5.mod (nostruct-align/8acn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.352888
/projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t2k-w0.5.mod(21):  Reading nostruct-align/1psdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t2k-w0.5.mod (nostruct-align/1psdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.096886
/projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t2k-w0.5.mod(21):  Reading nostruct-align/1ipwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-3327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t2k-w0.5.mod (nostruct-align/1ipwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.425867
/projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t2k-w0.5.mod(21):  Reading nostruct-align/3tgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t2k-w0.5.mod (nostruct-align/3tgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.698906
/projects/compbio/experiments/models.97/pdb/1q/1qojA/nostruct-align/1qojA.t2k-w0.5.mod(22):  Reading nostruct-align/1qojA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qojA/nostruct-align/1qojA.t2k-w0.5.mod (nostruct-align/1qojA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qojA/nostruct-align/1qojA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.750895
/projects/compbio/experiments/models.97/pdb/1f/1fo1A/nostruct-align/1fo1A.t2k-w0.5.mod(22):  Reading nostruct-align/1fo1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-26224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo1A/nostruct-align/1fo1A.t2k-w0.5.mod (nostruct-align/1fo1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fo1A/nostruct-align/1fo1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.676893
/projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t2k-w0.5.mod(21):  Reading nostruct-align/1try.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t2k-w0.5.mod (nostruct-align/1try.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.950905
/projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t2k-w0.5.mod(22):  Reading nostruct-align/3tgl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t2k-w0.5.mod (nostruct-align/3tgl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.348904
/projects/compbio/experiments/models.97/pdb/1d/1dh3A/nostruct-align/1dh3A.t2k-w0.5.mod(21):  Reading nostruct-align/1dh3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-32616/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dh3A/nostruct-align/1dh3A.t2k-w0.5.mod (nostruct-align/1dh3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dh3A/nostruct-align/1dh3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.100870
/projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t2k-w0.5.mod(21):  Reading nostruct-align/2xat.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13306/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t2k-w0.5.mod (nostruct-align/2xat.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.819880
/projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t2k-w0.5.mod(21):  Reading nostruct-align/1lehA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4565/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t2k-w0.5.mod (nostruct-align/1lehA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.259871
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Reading nostruct-align/1mil.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod (nostruct-align/1mil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.357887
/projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t2k-w0.5.mod(21):  Reading nostruct-align/1cqyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24547/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t2k-w0.5.mod (nostruct-align/1cqyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.308874
/projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t2k-w0.5.mod(21):  Reading nostruct-align/1a0oD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23185/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t2k-w0.5.mod (nostruct-align/1a0oD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.956852
/projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t2k-w0.5.mod(21):  Reading nostruct-align/1tsg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21528/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t2k-w0.5.mod (nostruct-align/1tsg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.023909
/projects/compbio/experiments/models.97/pdb/1t/1tsk/nostruct-align/1tsk.t2k-w0.5.mod(21):  Reading nostruct-align/1tsk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7899/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsk/nostruct-align/1tsk.t2k-w0.5.mod (nostruct-align/1tsk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tsk/nostruct-align/1tsk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.254892
/projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-w0.5.mod(21):  Reading nostruct-align/1ejdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-w0.5.mod (nostruct-align/1ejdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejdA/nostruct-align/1ejdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.213873
/projects/compbio/experiments/models.97/pdb/8a/8adh/nostruct-align/8adh.t2k-w0.5.mod(21):  Reading nostruct-align/8adh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-31469/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8a/8adh/nostruct-align/8adh.t2k-w0.5.mod (nostruct-align/8adh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8a/8adh/nostruct-align/8adh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.371861
/projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t2k-w0.5.mod(21):  Reading nostruct-align/1tsm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-28798/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t2k-w0.5.mod (nostruct-align/1tsm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.278858
/projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-w0.5.mod(22):  Reading nostruct-align/1i6lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-w0.5.mod (nostruct-align/1i6lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i6lA/nostruct-align/1i6lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.277855
/projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-w0.5.mod(22):  Reading nostruct-align/1dfuP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19917/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-w0.5.mod (nostruct-align/1dfuP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.990864
/projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t2k-w0.5.mod (nostruct-align/1qhaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.515873
/projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t2k-w0.5.mod(21):  Reading nostruct-align/1tsp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21082/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t2k-w0.5.mod (nostruct-align/1tsp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.988903
/projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-w0.5.mod(22):  Reading nostruct-align/1jetA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-w0.5.mod (nostruct-align/1jetA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.105885
/projects/compbio/experiments/models.97/pdb/1f/1f3hA/nostruct-align/1f3hA.t2k-w0.5.mod(21):  Reading nostruct-align/1f3hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3hA/nostruct-align/1f3hA.t2k-w0.5.mod (nostruct-align/1f3hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3hA/nostruct-align/1f3hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.660910
/projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t2k-w0.5.mod(21):  Reading nostruct-align/4crxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-22139/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t2k-w0.5.mod (nostruct-align/4crxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.198906
/projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k-w0.5.mod(21):  Reading nostruct-align/1htrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-938/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k-w0.5.mod (nostruct-align/1htrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.640877
/projects/compbio/experiments/models.97/pdb/1c/1c0dA/nostruct-align/1c0dA.t2k-w0.5.mod(21):  Reading nostruct-align/1c0dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-20111/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0dA/nostruct-align/1c0dA.t2k-w0.5.mod (nostruct-align/1c0dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c0dA/nostruct-align/1c0dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.594900
/projects/compbio/experiments/models.97/pdb/1e/1eqnA/nostruct-align/1eqnA.t2k-w0.5.mod(22):  Reading nostruct-align/1eqnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-20099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqnA/nostruct-align/1eqnA.t2k-w0.5.mod (nostruct-align/1eqnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eqnA/nostruct-align/1eqnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.790874
/projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t2k-w0.5.mod(22):  Reading nostruct-align/1oacA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t2k-w0.5.mod (nostruct-align/1oacA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.634911
/projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t2k-w0.5.mod(21):  Reading nostruct-align/1fmtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-25282/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t2k-w0.5.mod (nostruct-align/1fmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.946857
/projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t2k-w0.5.mod(21):  Reading nostruct-align/1fmtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-22643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t2k-w0.5.mod (nostruct-align/1fmtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.848883
/projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t2k-w0.5.mod(22):  Reading nostruct-align/1v39.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12405/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t2k-w0.5.mod (nostruct-align/1v39.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.794876
/projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t2k-w0.5.mod(21):  Reading nostruct-align/1mjc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t2k-w0.5.mod (nostruct-align/1mjc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.229897
/projects/compbio/experiments/models.97/pdb/1g/1gk8A/nostruct-align/1gk8A.t2k-w0.5.mod(22):  Reading nostruct-align/1gk8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-14254/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk8A/nostruct-align/1gk8A.t2k-w0.5.mod (nostruct-align/1gk8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gk8A/nostruct-align/1gk8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.798904
/projects/compbio/experiments/models.97/pdb/1c/1c7nA/nostruct-align/1c7nA.t2k-w0.5.mod(22):  Reading nostruct-align/1c7nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-17464/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7nA/nostruct-align/1c7nA.t2k-w0.5.mod (nostruct-align/1c7nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c7nA/nostruct-align/1c7nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.150888
/projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-w0.5.mod(22):  Reading nostruct-align/1g6xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-w0.5.mod (nostruct-align/1g6xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6xA/nostruct-align/1g6xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.484879
/projects/compbio/experiments/models.97/pdb/1f/1ffk1/nostruct-align/1ffk1.t2k-w0.5.mod(21):  Reading nostruct-align/1ffk1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-9848/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffk1/nostruct-align/1ffk1.t2k-w0.5.mod (nostruct-align/1ffk1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffk1/nostruct-align/1ffk1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.432859
/projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t2k-w0.5.mod(22):  Reading nostruct-align/1htrP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t2k-w0.5.mod (nostruct-align/1htrP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.411867
/projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-w0.5.mod(22):  Reading nostruct-align/1jtgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3162/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-w0.5.mod (nostruct-align/1jtgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jtgB/nostruct-align/1jtgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.413866
/projects/compbio/experiments/models.97/pdb/1g/1gk8I/nostruct-align/1gk8I.t2k-w0.5.mod(22):  Reading nostruct-align/1gk8I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk8I/nostruct-align/1gk8I.t2k-w0.5.mod (nostruct-align/1gk8I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gk8I/nostruct-align/1gk8I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.356892
/projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t2k-w0.5.mod(22):  Reading nostruct-align/1cs8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-28604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t2k-w0.5.mod (nostruct-align/1cs8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.450891
/projects/compbio/experiments/models.97/pdb/1c/1cqzA/nostruct-align/1cqzA.t2k-w0.5.mod(21):  Reading nostruct-align/1cqzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26956/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqzA/nostruct-align/1cqzA.t2k-w0.5.mod (nostruct-align/1cqzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqzA/nostruct-align/1cqzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.646885
/projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-w0.5.mod(21):  Reading nostruct-align/1qb7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13386/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-w0.5.mod (nostruct-align/1qb7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.782869
/projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t2k-w0.5.mod(21):  Reading nostruct-align/2u2fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30854/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t2k-w0.5.mod (nostruct-align/2u2fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.285885
/projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-w0.5.mod(22):  Reading nostruct-align/256bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12563/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-w0.5.mod (nostruct-align/256bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.889910
/projects/compbio/experiments/models.97/pdb/1e/1ejeA/nostruct-align/1ejeA.t2k-w0.5.mod(22):  Reading nostruct-align/1ejeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejeA/nostruct-align/1ejeA.t2k-w0.5.mod (nostruct-align/1ejeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejeA/nostruct-align/1ejeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.368870
/projects/compbio/experiments/models.97/pdb/1i/1iioA/nostruct-align/1iioA.t2k-w0.5.mod(21):  Reading nostruct-align/1iioA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-16940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iioA/nostruct-align/1iioA.t2k-w0.5.mod (nostruct-align/1iioA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iioA/nostruct-align/1iioA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.757908
/projects/compbio/experiments/models.97/pdb/1q/1qhbA/nostruct-align/1qhbA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31064/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhbA/nostruct-align/1qhbA.t2k-w0.5.mod (nostruct-align/1qhbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhbA/nostruct-align/1qhbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.364872
/projects/compbio/experiments/models.97/pdb/1m/1mhyB/nostruct-align/1mhyB.t2k-w0.5.mod(21):  Reading nostruct-align/1mhyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhyB/nostruct-align/1mhyB.t2k-w0.5.mod (nostruct-align/1mhyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhyB/nostruct-align/1mhyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.057852
/projects/compbio/experiments/models.97/pdb/1f/1ffkB/nostruct-align/1ffkB.t2k-w0.5.mod(22):  Reading nostruct-align/1ffkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28918/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkB/nostruct-align/1ffkB.t2k-w0.5.mod (nostruct-align/1ffkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkB/nostruct-align/1ffkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.724892
/projects/compbio/experiments/models.97/pdb/1f/1f3iA/nostruct-align/1f3iA.t2k-w0.5.mod(22):  Reading nostruct-align/1f3iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3iA/nostruct-align/1f3iA.t2k-w0.5.mod (nostruct-align/1f3iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3iA/nostruct-align/1f3iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.259865
/projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t2k-w0.5.mod(21):  Reading nostruct-align/1mhyD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-21964/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t2k-w0.5.mod (nostruct-align/1mhyD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.373873
/projects/compbio/experiments/models.97/pdb/1f/1ffkC/nostruct-align/1ffkC.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-25671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkC/nostruct-align/1ffkC.t2k-w0.5.mod (nostruct-align/1ffkC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkC/nostruct-align/1ffkC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.860899
/projects/compbio/experiments/models.97/pdb/1f/1ffkD/nostruct-align/1ffkD.t2k-w0.5.mod(22):  Reading nostruct-align/1ffkD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14186/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkD/nostruct-align/1ffkD.t2k-w0.5.mod (nostruct-align/1ffkD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkD/nostruct-align/1ffkD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.078863
/projects/compbio/experiments/models.97/pdb/1f/1ffkE/nostruct-align/1ffkE.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkE/nostruct-align/1ffkE.t2k-w0.5.mod (nostruct-align/1ffkE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkE/nostruct-align/1ffkE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.250874
/projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t2k-w0.5.mod(21):  Reading nostruct-align/3rp2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1980/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t2k-w0.5.mod (nostruct-align/3rp2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.986855
/projects/compbio/experiments/models.97/pdb/1m/1mhyG/nostruct-align/1mhyG.t2k-w0.5.mod(21):  Reading nostruct-align/1mhyG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-2359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhyG/nostruct-align/1mhyG.t2k-w0.5.mod (nostruct-align/1mhyG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhyG/nostruct-align/1mhyG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.946880
/projects/compbio/experiments/models.97/pdb/1f/1ffkF/nostruct-align/1ffkF.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-32456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkF/nostruct-align/1ffkF.t2k-w0.5.mod (nostruct-align/1ffkF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkF/nostruct-align/1ffkF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.139877
/projects/compbio/experiments/models.97/pdb/1e/1eqoA/nostruct-align/1eqoA.t2k-w0.5.mod(22):  Reading nostruct-align/1eqoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-19490/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqoA/nostruct-align/1eqoA.t2k-w0.5.mod (nostruct-align/1eqoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eqoA/nostruct-align/1eqoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.556911
/projects/compbio/experiments/models.97/pdb/1f/1ffkG/nostruct-align/1ffkG.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkG/nostruct-align/1ffkG.t2k-w0.5.mod (nostruct-align/1ffkG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkG/nostruct-align/1ffkG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.115868
/projects/compbio/experiments/models.97/pdb/1f/1ffkI/nostruct-align/1ffkI.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9603/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkI/nostruct-align/1ffkI.t2k-w0.5.mod (nostruct-align/1ffkI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkI/nostruct-align/1ffkI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.399910
/projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t2k-w0.5.mod(21):  Reading nostruct-align/1bnkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-14935/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t2k-w0.5.mod (nostruct-align/1bnkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.416880
/projects/compbio/experiments/models.97/pdb/1f/1fo3A/nostruct-align/1fo3A.t2k-w0.5.mod(21):  Reading nostruct-align/1fo3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7785/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo3A/nostruct-align/1fo3A.t2k-w0.5.mod (nostruct-align/1fo3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fo3A/nostruct-align/1fo3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.727888
/projects/compbio/experiments/models.97/pdb/1f/1ffkJ/nostruct-align/1ffkJ.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2315/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkJ/nostruct-align/1ffkJ.t2k-w0.5.mod (nostruct-align/1ffkJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkJ/nostruct-align/1ffkJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.402868
/projects/compbio/experiments/models.97/pdb/1f/1ffkK/nostruct-align/1ffkK.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkK.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13600/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkK/nostruct-align/1ffkK.t2k-w0.5.mod (nostruct-align/1ffkK.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkK/nostruct-align/1ffkK.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.691870
/projects/compbio/experiments/models.97/pdb/1f/1ffkL/nostruct-align/1ffkL.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11106/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkL/nostruct-align/1ffkL.t2k-w0.5.mod (nostruct-align/1ffkL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkL/nostruct-align/1ffkL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.234880
/projects/compbio/experiments/models.97/pdb/1f/1ffkM/nostruct-align/1ffkM.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkM/nostruct-align/1ffkM.t2k-w0.5.mod (nostruct-align/1ffkM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkM/nostruct-align/1ffkM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.339870
/projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-w0.5.mod(22):  Reading nostruct-align/1gk9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-w0.5.mod (nostruct-align/1gk9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gk9A/nostruct-align/1gk9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.315853
/projects/compbio/experiments/models.97/pdb/1f/1ffkN/nostruct-align/1ffkN.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8368/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkN/nostruct-align/1ffkN.t2k-w0.5.mod (nostruct-align/1ffkN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkN/nostruct-align/1ffkN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.477875
/projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t2k-w0.5.mod(22):  Reading nostruct-align/1ayoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14312/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t2k-w0.5.mod (nostruct-align/1ayoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.900904
/projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k-w0.5.mod(22):  Reading nostruct-align/1gk9B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k-w0.5.mod (nostruct-align/1gk9B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gk9B/nostruct-align/1gk9B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.744877
/projects/compbio/experiments/models.97/pdb/1f/1ffkO/nostruct-align/1ffkO.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkO.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-5179/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkO/nostruct-align/1ffkO.t2k-w0.5.mod (nostruct-align/1ffkO.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkO/nostruct-align/1ffkO.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.477901
/projects/compbio/experiments/models.97/pdb/1f/1ffkP/nostruct-align/1ffkP.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkP/nostruct-align/1ffkP.t2k-w0.5.mod (nostruct-align/1ffkP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkP/nostruct-align/1ffkP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.857876
/projects/compbio/experiments/models.97/pdb/1f/1ffkQ/nostruct-align/1ffkQ.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkQ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkQ/nostruct-align/1ffkQ.t2k-w0.5.mod (nostruct-align/1ffkQ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkQ/nostruct-align/1ffkQ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.355881
/projects/compbio/experiments/models.97/pdb/1f/1ffkR/nostruct-align/1ffkR.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-10109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkR/nostruct-align/1ffkR.t2k-w0.5.mod (nostruct-align/1ffkR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkR/nostruct-align/1ffkR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.237858
/projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t2k-w0.5.mod(21):  Reading nostruct-align/1faq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t2k-w0.5.mod (nostruct-align/1faq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.618868
/projects/compbio/experiments/models.97/pdb/1f/1ffkS/nostruct-align/1ffkS.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkS/nostruct-align/1ffkS.t2k-w0.5.mod (nostruct-align/1ffkS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkS/nostruct-align/1ffkS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.055870
/projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t2k-w0.5.mod(21):  Reading nostruct-align/1far.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16113/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t2k-w0.5.mod (nostruct-align/1far.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.620911
/projects/compbio/experiments/models.97/pdb/1f/1ffkT/nostruct-align/1ffkT.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkT.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-30435/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkT/nostruct-align/1ffkT.t2k-w0.5.mod (nostruct-align/1ffkT.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkT/nostruct-align/1ffkT.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.797857
/projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k-w0.5.mod(21):  Reading nostruct-align/1fas.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k-w0.5.mod (nostruct-align/1fas.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.162861
/projects/compbio/experiments/models.97/pdb/1j/1jthA/nostruct-align/1jthA.t2k-w0.5.mod(22):  Reading nostruct-align/1jthA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jthA/nostruct-align/1jthA.t2k-w0.5.mod (nostruct-align/1jthA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jthA/nostruct-align/1jthA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.962854
/projects/compbio/experiments/models.97/pdb/1f/1ffkU/nostruct-align/1ffkU.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkU.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9131/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkU/nostruct-align/1ffkU.t2k-w0.5.mod (nostruct-align/1ffkU.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkU/nostruct-align/1ffkU.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.052868
/projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t2k-w0.5.mod(21):  Reading nostruct-align/1tuc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-32745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t2k-w0.5.mod (nostruct-align/1tuc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.602873
/projects/compbio/experiments/models.97/pdb/1j/1jthB/nostruct-align/1jthB.t2k-w0.5.mod(22):  Reading nostruct-align/1jthB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3544/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jthB/nostruct-align/1jthB.t2k-w0.5.mod (nostruct-align/1jthB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jthB/nostruct-align/1jthB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.624851
/projects/compbio/experiments/models.97/pdb/1f/1ffkV/nostruct-align/1ffkV.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkV.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkV/nostruct-align/1ffkV.t2k-w0.5.mod (nostruct-align/1ffkV.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkV/nostruct-align/1ffkV.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.336864
/projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t2k-w0.5.mod(21):  Reading nostruct-align/1yuiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-25047/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t2k-w0.5.mod (nostruct-align/1yuiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.067905
/projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t2k-w0.5.mod(21):  Reading nostruct-align/1tud.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1653/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t2k-w0.5.mod (nostruct-align/1tud.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.425871
/projects/compbio/experiments/models.97/pdb/1f/1ffkW/nostruct-align/1ffkW.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkW.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkW/nostruct-align/1ffkW.t2k-w0.5.mod (nostruct-align/1ffkW.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkW/nostruct-align/1ffkW.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.535891
/projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-w0.5.mod(22):  Reading nostruct-align/1e19A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23902/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-w0.5.mod (nostruct-align/1e19A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e19A/nostruct-align/1e19A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.384859
/projects/compbio/experiments/models.97/pdb/1f/1ffkX/nostruct-align/1ffkX.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkX/nostruct-align/1ffkX.t2k-w0.5.mod (nostruct-align/1ffkX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkX/nostruct-align/1ffkX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.004904
/projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t2k-w0.5.mod(21):  Reading nostruct-align/2bgu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25190/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t2k-w0.5.mod (nostruct-align/2bgu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.891861
/projects/compbio/experiments/models.97/pdb/1m/1mkp/nostruct-align/1mkp.t2k-w0.5.mod(21):  Reading nostruct-align/1mkp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-29813/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mkp/nostruct-align/1mkp.t2k-w0.5.mod (nostruct-align/1mkp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mkp/nostruct-align/1mkp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.364857
/projects/compbio/experiments/models.97/pdb/1f/1ffkY/nostruct-align/1ffkY.t2k-w0.5.mod(22):  Reading nostruct-align/1ffkY.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkY/nostruct-align/1ffkY.t2k-w0.5.mod (nostruct-align/1ffkY.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkY/nostruct-align/1ffkY.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.671904
/projects/compbio/experiments/models.97/pdb/1f/1ffkZ/nostruct-align/1ffkZ.t2k-w0.5.mod(21):  Reading nostruct-align/1ffkZ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffkZ/nostruct-align/1ffkZ.t2k-w0.5.mod (nostruct-align/1ffkZ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffkZ/nostruct-align/1ffkZ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.624880
/projects/compbio/experiments/models.97/pdb/1e/1ejfA/nostruct-align/1ejfA.t2k-w0.5.mod(22):  Reading nostruct-align/1ejfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1045/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejfA/nostruct-align/1ejfA.t2k-w0.5.mod (nostruct-align/1ejfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejfA/nostruct-align/1ejfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.755888
/projects/compbio/experiments/models.97/pdb/1a/1a99A/nostruct-align/1a99A.t2k-w0.5.mod(21):  Reading nostruct-align/1a99A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-593/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a99A/nostruct-align/1a99A.t2k-w0.5.mod (nostruct-align/1a99A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a99A/nostruct-align/1a99A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.456875
/projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-w0.5.mod(22):  Reading nostruct-align/3pviA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-15416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-w0.5.mod (nostruct-align/3pviA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.100864
/projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t2k-w0.5.mod(22):  Reading nostruct-align/1tul.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14558/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t2k-w0.5.mod (nostruct-align/1tul.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.678871
/projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k-w0.5.mod(21):  Reading nostruct-align/1cydA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24623/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k-w0.5.mod (nostruct-align/1cydA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.332895
/projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t2k-w0.5.mod(21):  Reading nostruct-align/1tum.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9208/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t2k-w0.5.mod (nostruct-align/1tum.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.233883
/projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t2k-w0.5.mod(21):  Reading nostruct-align/1jevA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t2k-w0.5.mod (nostruct-align/1jevA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.042906
/projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t2k-w0.5.mod(21):  Reading nostruct-align/1dujA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-1285/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t2k-w0.5.mod (nostruct-align/1dujA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.134871
/projects/compbio/experiments/models.97/pdb/1h/1httA/nostruct-align/1httA.t2k-w0.5.mod(21):  Reading nostruct-align/1httA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-31489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1httA/nostruct-align/1httA.t2k-w0.5.mod (nostruct-align/1httA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1httA/nostruct-align/1httA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.861864
/projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-w0.5.mod(22):  Reading nostruct-align/1gd0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-w0.5.mod (nostruct-align/1gd0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd0A/nostruct-align/1gd0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.984896
/projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t2k-w0.5.mod(21):  Reading nostruct-align/1tux.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-3811/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t2k-w0.5.mod (nostruct-align/1tux.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.204866
/projects/compbio/experiments/models.97/pdb/1f/1fo4A/nostruct-align/1fo4A.t2k-w0.5.mod(21):  Reading nostruct-align/1fo4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23750/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo4A/nostruct-align/1fo4A.t2k-w0.5.mod (nostruct-align/1fo4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fo4A/nostruct-align/1fo4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.039885
/projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-w0.5.mod(22):  Reading nostruct-align/1mla.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16823/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-w0.5.mod (nostruct-align/1mla.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.800863
/projects/compbio/experiments/models.97/pdb/1g/1g6zA/nostruct-align/1g6zA.t2k-w0.5.mod(21):  Reading nostruct-align/1g6zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10706/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6zA/nostruct-align/1g6zA.t2k-w0.5.mod (nostruct-align/1g6zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6zA/nostruct-align/1g6zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.521868
/projects/compbio/experiments/models.97/pdb/1e/1exzA/nostruct-align/1exzA.t2k-w0.5.mod(22):  Reading nostruct-align/1exzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-3033/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exzA/nostruct-align/1exzA.t2k-w0.5.mod (nostruct-align/1exzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exzA/nostruct-align/1exzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.952896
/projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-w0.5.mod(22):  Reading nostruct-align/1d3vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23670/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-w0.5.mod (nostruct-align/1d3vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.089861
/projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t2k-w0.5.mod(21):  Reading nostruct-align/1mli.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t2k-w0.5.mod (nostruct-align/1mli.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.658857
/projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t2k-w0.5.mod(21):  Reading nostruct-align/1fbr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t2k-w0.5.mod (nostruct-align/1fbr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.257864
/projects/compbio/experiments/models.97/pdb/1l/1l2iA/nostruct-align/1l2iA.t2k-w0.5.mod(22):  Reading nostruct-align/1l2iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5462/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l2iA/nostruct-align/1l2iA.t2k-w0.5.mod (nostruct-align/1l2iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l2iA/nostruct-align/1l2iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.317884
/projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t2k-w0.5.mod(21):  Reading nostruct-align/1fd2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t2k-w0.5.mod (nostruct-align/1fd2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.326897
/projects/compbio/experiments/models.97/pdb/1r/1rdj1/nostruct-align/1rdj1.t2k-w0.5.mod(21):  Reading nostruct-align/1rdj1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20190/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdj1/nostruct-align/1rdj1.t2k-w0.5.mod (nostruct-align/1rdj1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rdj1/nostruct-align/1rdj1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.736902
/projects/compbio/experiments/models.97/pdb/1g/1gqeA/nostruct-align/1gqeA.t2k-w0.5.mod(22):  Reading nostruct-align/1gqeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqeA/nostruct-align/1gqeA.t2k-w0.5.mod (nostruct-align/1gqeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gqeA/nostruct-align/1gqeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.745886
/projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t2k-w0.5.mod(21):  Reading nostruct-align/1mn1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-2849/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t2k-w0.5.mod (nostruct-align/1mn1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.282902
/projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k-w0.5.mod(22):  Reading nostruct-align/1ejgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9008/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k-w0.5.mod (nostruct-align/1ejgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.485891
/projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t2k-w0.5.mod(22):  Reading nostruct-align/3mag.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18529/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t2k-w0.5.mod (nostruct-align/3mag.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.603909
/projects/compbio/experiments/models.97/pdb/1q/1qhdA/nostruct-align/1qhdA.t2k-w0.5.mod(22):  Reading nostruct-align/1qhdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25510/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhdA/nostruct-align/1qhdA.t2k-w0.5.mod (nostruct-align/1qhdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhdA/nostruct-align/1qhdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.668879
/projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t2k-w0.5.mod(21):  Reading nostruct-align/1fca.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-27460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t2k-w0.5.mod (nostruct-align/1fca.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.894899
/projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t2k-w0.5.mod(21):  Reading nostruct-align/1b4aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9386/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t2k-w0.5.mod (nostruct-align/1b4aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.089899
/projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t2k-w0.5.mod(21):  Reading nostruct-align/3ladA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t2k-w0.5.mod (nostruct-align/3ladA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.896864
/projects/compbio/experiments/models.97/pdb/1j/1jg5A/nostruct-align/1jg5A.t2k-w0.5.mod(22):  Reading nostruct-align/1jg5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27124/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jg5A/nostruct-align/1jg5A.t2k-w0.5.mod (nostruct-align/1jg5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jg5A/nostruct-align/1jg5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.665863
/projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t2k-w0.5.mod(21):  Reading nostruct-align/1tvs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-15982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t2k-w0.5.mod (nostruct-align/1tvs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.004866
/projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t2k-w0.5.mod(21):  Reading nostruct-align/1fce.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-3127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t2k-w0.5.mod (nostruct-align/1fce.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.507895
/projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t2k-w0.5.mod(21):  Reading nostruct-align/1tvt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16781/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t2k-w0.5.mod (nostruct-align/1tvt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.004866
/projects/compbio/experiments/models.97/pdb/1t/1trrA/nostruct-align/1trrA.t2k-w0.5.mod(21):  Reading nostruct-align/1trrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-26952/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1trrA/nostruct-align/1trrA.t2k-w0.5.mod (nostruct-align/1trrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1trrA/nostruct-align/1trrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.683893
/projects/compbio/experiments/models.97/pdb/1f/1fo5A/nostruct-align/1fo5A.t2k-w0.5.mod(21):  Reading nostruct-align/1fo5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-9275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo5A/nostruct-align/1fo5A.t2k-w0.5.mod (nostruct-align/1fo5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fo5A/nostruct-align/1fo5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.246881
/projects/compbio/experiments/models.97/pdb/1m/1mmc/nostruct-align/1mmc.t2k-w0.5.mod(21):  Reading nostruct-align/1mmc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1105/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmc/nostruct-align/1mmc.t2k-w0.5.mod (nostruct-align/1mmc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mmc/nostruct-align/1mmc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.799883
/projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t2k-w0.5.mod(22):  Reading nostruct-align/1cl1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28262/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t2k-w0.5.mod (nostruct-align/1cl1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.818851
/projects/compbio/experiments/models.97/pdb/1c/1cjsA/nostruct-align/1cjsA.t2k-w0.5.mod(21):  Reading nostruct-align/1cjsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjsA/nostruct-align/1cjsA.t2k-w0.5.mod (nostruct-align/1cjsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cjsA/nostruct-align/1cjsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.613888
/projects/compbio/experiments/models.97/pdb/1c/1c7qA/nostruct-align/1c7qA.t2k-w0.5.mod(21):  Reading nostruct-align/1c7qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-15748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7qA/nostruct-align/1c7qA.t2k-w0.5.mod (nostruct-align/1c7qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c7qA/nostruct-align/1c7qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.521875
/projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t2k-w0.5.mod(22):  Reading nostruct-align/1gd1O.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7718/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t2k-w0.5.mod (nostruct-align/1gd1O.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.607895
/projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t2k-w0.5.mod(21):  Reading nostruct-align/1fct.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15656/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t2k-w0.5.mod (nostruct-align/1fct.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.505859
/projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-w0.5.mod(22):  Reading nostruct-align/1mml.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-w0.5.mod (nostruct-align/1mml.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.826859
/projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t2k-w0.5.mod(21):  Reading nostruct-align/1p32A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8889/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t2k-w0.5.mod (nostruct-align/1p32A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.353855
/projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t2k-w0.5.mod(22):  Reading nostruct-align/1nstA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25494/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t2k-w0.5.mod (nostruct-align/1nstA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.502882
/projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t2k-w0.5.mod(21):  Reading nostruct-align/1p32C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t2k-w0.5.mod (nostruct-align/1p32C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.017895
/projects/compbio/experiments/models.97/pdb/1m/1mmq/nostruct-align/1mmq.t2k-w0.5.mod(21):  Reading nostruct-align/1mmq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-23720/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmq/nostruct-align/1mmq.t2k-w0.5.mod (nostruct-align/1mmq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mmq/nostruct-align/1mmq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.873859
/projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t2k-w0.5.mod(21):  Reading nostruct-align/1ejhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t2k-w0.5.mod (nostruct-align/1ejhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.368896
/projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t2k-w0.5.mod(21):  Reading nostruct-align/1tkiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t2k-w0.5.mod (nostruct-align/1tkiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.461859
/projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-w0.5.mod(22):  Reading nostruct-align/1iirA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-26310/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-w0.5.mod (nostruct-align/1iirA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iirA/nostruct-align/1iirA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.866877
/projects/compbio/experiments/models.97/pdb/1i/1i6pA/nostruct-align/1i6pA.t2k-w0.5.mod(21):  Reading nostruct-align/1i6pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27831/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6pA/nostruct-align/1i6pA.t2k-w0.5.mod (nostruct-align/1i6pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i6pA/nostruct-align/1i6pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.398897
/projects/compbio/experiments/models.97/pdb/1b/1b4bA/nostruct-align/1b4bA.t2k-w0.5.mod(21):  Reading nostruct-align/1b4bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-30945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4bA/nostruct-align/1b4bA.t2k-w0.5.mod (nostruct-align/1b4bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4bA/nostruct-align/1b4bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.123892
/projects/compbio/experiments/models.97/pdb/1f/1f3lA/nostruct-align/1f3lA.t2k-w0.5.mod(21):  Reading nostruct-align/1f3lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6325/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3lA/nostruct-align/1f3lA.t2k-w0.5.mod (nostruct-align/1f3lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3lA/nostruct-align/1f3lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.437880
/projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t2k-w0.5.mod(22):  Reading nostruct-align/1dulA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12383/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t2k-w0.5.mod (nostruct-align/1dulA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.967896
/projects/compbio/experiments/models.97/pdb/1a/1a0sP/nostruct-align/1a0sP.t2k-w0.5.mod(21):  Reading nostruct-align/1a0sP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-32217/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0sP/nostruct-align/1a0sP.t2k-w0.5.mod (nostruct-align/1a0sP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0sP/nostruct-align/1a0sP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.694904
/projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t2k-w0.5.mod(21):  Reading nostruct-align/1fdd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12736/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t2k-w0.5.mod (nostruct-align/1fdd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.401901
/projects/compbio/experiments/models.97/pdb/1g/1g10A/nostruct-align/1g10A.t2k-w0.5.mod(21):  Reading nostruct-align/1g10A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g10A/nostruct-align/1g10A.t2k-w0.5.mod (nostruct-align/1g10A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g10A/nostruct-align/1g10A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.631863
/projects/compbio/experiments/models.97/pdb/1g/1gd2E/nostruct-align/1gd2E.t2k-w0.5.mod(22):  Reading nostruct-align/1gd2E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5429/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd2E/nostruct-align/1gd2E.t2k-w0.5.mod (nostruct-align/1gd2E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd2E/nostruct-align/1gd2E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.450909
/projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t2k-w0.5.mod(22):  Reading nostruct-align/1fdi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-31391/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t2k-w0.5.mod (nostruct-align/1fdi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.700882
/projects/compbio/experiments/models.97/pdb/1g/1gd2G/nostruct-align/1gd2G.t2k-w0.5.mod(21):  Reading nostruct-align/1gd2G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-15542/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd2G/nostruct-align/1gd2G.t2k-w0.5.mod (nostruct-align/1gd2G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd2G/nostruct-align/1gd2G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.268906
/projects/compbio/experiments/models.97/pdb/1j/1jmaA/nostruct-align/1jmaA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13209/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmaA/nostruct-align/1jmaA.t2k-w0.5.mod (nostruct-align/1jmaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmaA/nostruct-align/1jmaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.495903
/projects/compbio/experiments/models.97/pdb/1g/1gd2I/nostruct-align/1gd2I.t2k-w0.5.mod(21):  Reading nostruct-align/1gd2I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-13792/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd2I/nostruct-align/1gd2I.t2k-w0.5.mod (nostruct-align/1gd2I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd2I/nostruct-align/1gd2I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.481874
/projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t2k-w0.5.mod(21):  Reading nostruct-align/1cl2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27794/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t2k-w0.5.mod (nostruct-align/1cl2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.817890
/projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t2k-w0.5.mod(21):  Reading nostruct-align/1mnd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-22683/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t2k-w0.5.mod (nostruct-align/1mnd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.273874
/projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t2k-w0.5.mod(21):  Reading nostruct-align/1fdm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t2k-w0.5.mod (nostruct-align/1fdm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.407856
/projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t2k-w0.5.mod(22):  Reading nostruct-align/1fdo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-22027/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t2k-w0.5.mod (nostruct-align/1fdo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.573866
/projects/compbio/experiments/models.97/pdb/1x/1xyfA/nostruct-align/1xyfA.t2k-w0.5.mod(21):  Reading nostruct-align/1xyfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xyfA/nostruct-align/1xyfA.t2k-w0.5.mod (nostruct-align/1xyfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xyfA/nostruct-align/1xyfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.310881
/projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-w0.5.mod(21):  Reading nostruct-align/1fdr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-w0.5.mod (nostruct-align/1fdr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.716856
/projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t2k-w0.5.mod(21):  Reading nostruct-align/1bw6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t2k-w0.5.mod (nostruct-align/1bw6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.483881
/projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t2k-w0.5.mod(21):  Reading nostruct-align/1fds.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-26035/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t2k-w0.5.mod (nostruct-align/1fds.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.851877
/projects/compbio/experiments/models.97/pdb/1j/1jtkA/nostruct-align/1jtkA.t2k-w0.5.mod(22):  Reading nostruct-align/1jtkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3272/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jtkA/nostruct-align/1jtkA.t2k-w0.5.mod (nostruct-align/1jtkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jtkA/nostruct-align/1jtkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.304878
/projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t2k-w0.5.mod(21):  Reading nostruct-align/2itg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11376/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t2k-w0.5.mod (nostruct-align/2itg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.628906
/projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t2k-w0.5.mod(21):  Reading nostruct-align/1txb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t2k-w0.5.mod (nostruct-align/1txb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.159889
/projects/compbio/experiments/models.97/pdb/1f/1fdt/nostruct-align/1fdt.t2k-w0.5.mod(21):  Reading nostruct-align/1fdt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-5832/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdt/nostruct-align/1fdt.t2k-w0.5.mod (nostruct-align/1fdt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdt/nostruct-align/1fdt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.109859
/projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t2k-w0.5.mod(21):  Reading nostruct-align/1kigI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-9695/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t2k-w0.5.mod (nostruct-align/1kigI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.651861
/projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t2k-w0.5.mod(21):  Reading nostruct-align/1kigL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-24468/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t2k-w0.5.mod (nostruct-align/1kigL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.440872
/projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t2k-w0.5.mod(21):  Reading nostruct-align/1txm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-14904/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t2k-w0.5.mod (nostruct-align/1txm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.166861
/projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t2k-w0.5.mod (nostruct-align/1qhfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.858856
/projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t2k-w0.5.mod(21):  Reading nostruct-align/1bgeB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-6794/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t2k-w0.5.mod (nostruct-align/1bgeB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.793865
/projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t2k-w0.5.mod(21):  Reading nostruct-align/1b4cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-4766/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t2k-w0.5.mod (nostruct-align/1b4cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.512882
/projects/compbio/experiments/models.97/pdb/1j/1jeyA/nostruct-align/1jeyA.t2k-w0.5.mod(22):  Reading nostruct-align/1jeyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4111/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeyA/nostruct-align/1jeyA.t2k-w0.5.mod (nostruct-align/1jeyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jeyA/nostruct-align/1jeyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.073866
/projects/compbio/experiments/models.97/pdb/1f/1f3mA/nostruct-align/1f3mA.t2k-w0.5.mod(22):  Reading nostruct-align/1f3mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10791/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3mA/nostruct-align/1f3mA.t2k-w0.5.mod (nostruct-align/1f3mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3mA/nostruct-align/1f3mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.675898
/projects/compbio/experiments/models.97/pdb/1j/1jeyB/nostruct-align/1jeyB.t2k-w0.5.mod(22):  Reading nostruct-align/1jeyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jeyB/nostruct-align/1jeyB.t2k-w0.5.mod (nostruct-align/1jeyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jeyB/nostruct-align/1jeyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.827887
/projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t2k-w0.5.mod(21):  Reading nostruct-align/1a0tP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t2k-w0.5.mod (nostruct-align/1a0tP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.627861
/projects/compbio/experiments/models.97/pdb/1f/1f3mC/nostruct-align/1f3mC.t2k-w0.5.mod(21):  Reading nostruct-align/1f3mC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8564/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3mC/nostruct-align/1f3mC.t2k-w0.5.mod (nostruct-align/1f3mC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3mC/nostruct-align/1f3mC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.935902
/projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k-w0.5.mod(22):  Reading nostruct-align/1qopA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3431/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k-w0.5.mod (nostruct-align/1qopA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qopA/nostruct-align/1qopA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.601860
/projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-w0.5.mod(22):  Reading nostruct-align/1qopB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27242/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-w0.5.mod (nostruct-align/1qopB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qopB/nostruct-align/1qopB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.547903
/projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k-w0.5.mod(21):  Reading nostruct-align/1c7sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29836/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k-w0.5.mod (nostruct-align/1c7sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c7sA/nostruct-align/1c7sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.582876
/projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-w0.5.mod(22):  Reading nostruct-align/1mof.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3672/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-w0.5.mod (nostruct-align/1mof.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.604868
/projects/compbio/experiments/models.97/pdb/1k/1k6fA/nostruct-align/1k6fA.t2k-w0.5.mod(22):  Reading nostruct-align/1k6fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6fA/nostruct-align/1k6fA.t2k-w0.5.mod (nostruct-align/1k6fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k6fA/nostruct-align/1k6fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.364853
/projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-w0.5.mod(22):  Reading nostruct-align/1mwpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7559/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-w0.5.mod (nostruct-align/1mwpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.916889
/projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t2k-w0.5.mod(22):  Reading nostruct-align/1d3yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22871/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t2k-w0.5.mod (nostruct-align/1d3yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.469856
/projects/compbio/experiments/models.97/pdb/1l/1lenB/nostruct-align/1lenB.t2k-w0.5.mod(21):  Reading nostruct-align/1lenB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-23414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lenB/nostruct-align/1lenB.t2k-w0.5.mod (nostruct-align/1lenB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lenB/nostruct-align/1lenB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.748869
/projects/compbio/experiments/models.97/pdb/9i/9insB/nostruct-align/9insB.t2k-w0.5.mod(21):  Reading nostruct-align/9insB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-17158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9i/9insB/nostruct-align/9insB.t2k-w0.5.mod (nostruct-align/9insB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9i/9insB/nostruct-align/9insB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.595879
/projects/compbio/experiments/models.97/pdb/1i/1ibjA/nostruct-align/1ibjA.t2k-w0.5.mod(21):  Reading nostruct-align/1ibjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibjA/nostruct-align/1ibjA.t2k-w0.5.mod (nostruct-align/1ibjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ibjA/nostruct-align/1ibjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.559908
/projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-w0.5.mod(22):  Reading nostruct-align/1moq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17946/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-w0.5.mod (nostruct-align/1moq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.575851
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Reading nostruct-align/1ejjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod (nostruct-align/1ejjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.451860
/projects/compbio/experiments/models.97/pdb/1j/1jg8A/nostruct-align/1jg8A.t2k-w0.5.mod(22):  Reading nostruct-align/1jg8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jg8A/nostruct-align/1jg8A.t2k-w0.5.mod (nostruct-align/1jg8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jg8A/nostruct-align/1jg8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.140875
/projects/compbio/experiments/models.97/pdb/7c/7ceiB/nostruct-align/7ceiB.t2k-w0.5.mod(22):  Reading nostruct-align/7ceiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31633/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7c/7ceiB/nostruct-align/7ceiB.t2k-w0.5.mod (nostruct-align/7ceiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7c/7ceiB/nostruct-align/7ceiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.880875
/projects/compbio/experiments/models.97/pdb/5l/5lyz/nostruct-align/5lyz.t2k-w0.5.mod(21):  Reading nostruct-align/5lyz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-10276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5l/5lyz/nostruct-align/5lyz.t2k-w0.5.mod (nostruct-align/5lyz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5l/5lyz/nostruct-align/5lyz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.015896
/projects/compbio/experiments/models.97/pdb/1n/1necA/nostruct-align/1necA.t2k-w0.5.mod(21):  Reading nostruct-align/1necA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-1336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1necA/nostruct-align/1necA.t2k-w0.5.mod (nostruct-align/1necA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1necA/nostruct-align/1necA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.281853
/projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t2k-w0.5.mod(22):  Reading nostruct-align/1tys.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t2k-w0.5.mod (nostruct-align/1tys.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.414864
/projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-w0.5.mod(21):  Reading nostruct-align/1g12A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-w0.5.mod (nostruct-align/1g12A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g12A/nostruct-align/1g12A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.412878
/projects/compbio/experiments/models.97/pdb/1t/1tyu/nostruct-align/1tyu.t2k-w0.5.mod(21):  Reading nostruct-align/1tyu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11296/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tyu/nostruct-align/1tyu.t2k-w0.5.mod (nostruct-align/1tyu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tyu/nostruct-align/1tyu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.017860
/projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t2k-w0.5.mod(22):  Reading nostruct-align/1ltaC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-17224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t2k-w0.5.mod (nostruct-align/1ltaC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.230873
/projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-w0.5.mod(22):  Reading nostruct-align/1tyv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-w0.5.mod (nostruct-align/1tyv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.008865
/projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-w0.5.mod(22):  Reading nostruct-align/1mpgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-w0.5.mod (nostruct-align/1mpgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.731882
/projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-w0.5.mod(22):  Reading nostruct-align/1fo8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2202/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-w0.5.mod (nostruct-align/1fo8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fo8A/nostruct-align/1fo8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.188877
/projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t2k-w0.5.mod(21):  Reading nostruct-align/1mpb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-7287/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t2k-w0.5.mod (nostruct-align/1mpb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.882895
/projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2827/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t2k-w0.5.mod (nostruct-align/1jmcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.355873
/projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t2k-w0.5.mod(21):  Reading nostruct-align/1cl4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25741/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t2k-w0.5.mod (nostruct-align/1cl4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.249863
/projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t2k-w0.5.mod(21):  Reading nostruct-align/1bw8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11938/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t2k-w0.5.mod (nostruct-align/1bw8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.728882
/projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t2k-w0.5.mod(22):  Reading nostruct-align/1p35A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3510/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t2k-w0.5.mod (nostruct-align/1p35A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.141870
/projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t2k-w0.5.mod(21):  Reading nostruct-align/1mpp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-2859/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t2k-w0.5.mod (nostruct-align/1mpp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.436878
/projects/compbio/experiments/models.97/pdb/1k/1kpsB/nostruct-align/1kpsB.t2k-w0.5.mod(22):  Reading nostruct-align/1kpsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpsB/nostruct-align/1kpsB.t2k-w0.5.mod (nostruct-align/1kpsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kpsB/nostruct-align/1kpsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.740877
/projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k-w0.5.mod(22):  Reading nostruct-align/1hfeL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21800/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k-w0.5.mod (nostruct-align/1hfeL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.681906
/projects/compbio/experiments/models.97/pdb/1i/1i81A/nostruct-align/1i81A.t2k-w0.5.mod(22):  Reading nostruct-align/1i81A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23057/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i81A/nostruct-align/1i81A.t2k-w0.5.mod (nostruct-align/1i81A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i81A/nostruct-align/1i81A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.973906
/projects/compbio/experiments/models.97/pdb/1q/1qhhA/nostruct-align/1qhhA.t2k-w0.5.mod(22):  Reading nostruct-align/1qhhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhhA/nostruct-align/1qhhA.t2k-w0.5.mod (nostruct-align/1qhhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhhA/nostruct-align/1qhhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.409889
/projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t2k-w0.5.mod(21):  Reading nostruct-align/1b4eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25290/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t2k-w0.5.mod (nostruct-align/1b4eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.989866
/projects/compbio/experiments/models.97/pdb/1q/1qhhC/nostruct-align/1qhhC.t2k-w0.5.mod(22):  Reading nostruct-align/1qhhC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4285/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhhC/nostruct-align/1qhhC.t2k-w0.5.mod (nostruct-align/1qhhC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhhC/nostruct-align/1qhhC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.427883
/projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-w0.5.mod(22):  Reading nostruct-align/1hfeS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-w0.5.mod (nostruct-align/1hfeS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.062874
/projects/compbio/experiments/models.97/pdb/1q/1qhhD/nostruct-align/1qhhD.t2k-w0.5.mod(22):  Reading nostruct-align/1qhhD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22765/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhhD/nostruct-align/1qhhD.t2k-w0.5.mod (nostruct-align/1qhhD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhhD/nostruct-align/1qhhD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.576864
/projects/compbio/experiments/models.97/pdb/1h/1htyA/nostruct-align/1htyA.t2k-w0.5.mod(22):  Reading nostruct-align/1htyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-20331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htyA/nostruct-align/1htyA.t2k-w0.5.mod (nostruct-align/1htyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1htyA/nostruct-align/1htyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.274893
/projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t2k-w0.5.mod(21):  Reading nostruct-align/2chsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9192/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t2k-w0.5.mod (nostruct-align/2chsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.924911
/projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t2k-w0.5.mod(22):  Reading nostruct-align/1svpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1496/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t2k-w0.5.mod (nostruct-align/1svpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.859856
/projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t2k-w0.5.mod(21):  Reading nostruct-align/1nedA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-26306/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t2k-w0.5.mod (nostruct-align/1nedA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.532898
/projects/compbio/experiments/models.97/pdb/1g/1gd5A/nostruct-align/1gd5A.t2k-w0.5.mod(21):  Reading nostruct-align/1gd5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27535/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd5A/nostruct-align/1gd5A.t2k-w0.5.mod (nostruct-align/1gd5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd5A/nostruct-align/1gd5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.806875
/projects/compbio/experiments/models.97/pdb/1g/1g13A/nostruct-align/1g13A.t2k-w0.5.mod(22):  Reading nostruct-align/1g13A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13895/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g13A/nostruct-align/1g13A.t2k-w0.5.mod (nostruct-align/1g13A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g13A/nostruct-align/1g13A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.123898
/projects/compbio/experiments/models.97/pdb/1f/1fge/nostruct-align/1fge.t2k-w0.5.mod(21):  Reading nostruct-align/1fge.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22614/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fge/nostruct-align/1fge.t2k-w0.5.mod (nostruct-align/1fge.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fge/nostruct-align/1fge.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.689903
/projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-w0.5.mod(22):  Reading nostruct-align/4uagA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22384/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-w0.5.mod (nostruct-align/4uagA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.543865
/projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t2k-w0.5.mod(21):  Reading nostruct-align/1qorA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-10164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t2k-w0.5.mod (nostruct-align/1qorA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.439888
/projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-w0.5.mod(21):  Reading nostruct-align/1cjwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19720/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-w0.5.mod (nostruct-align/1cjwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.396879
/projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t2k-w0.5.mod(21):  Reading nostruct-align/2xis.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-4957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t2k-w0.5.mod (nostruct-align/2xis.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.384882
/projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t2k-w0.5.mod(21):  Reading nostruct-align/1bw9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-31085/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t2k-w0.5.mod (nostruct-align/1bw9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.851910
/projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t2k-w0.5.mod(21):  Reading nostruct-align/1lepA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-650/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t2k-w0.5.mod (nostruct-align/1lepA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.835852
/projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t2k-w0.5.mod(21):  Reading nostruct-align/1fgs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t2k-w0.5.mod (nostruct-align/1fgs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.149872
/projects/compbio/experiments/models.97/pdb/1r/1rdo1/nostruct-align/1rdo1.t2k-w0.5.mod(22):  Reading nostruct-align/1rdo1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4795/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdo1/nostruct-align/1rdo1.t2k-w0.5.mod (nostruct-align/1rdo1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rdo1/nostruct-align/1rdo1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.955893
/projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-w0.5.mod(22):  Reading nostruct-align/1kptA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-w0.5.mod (nostruct-align/1kptA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.508852
/projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t2k-w0.5.mod(22):  Reading nostruct-align/1vrkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30915/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t2k-w0.5.mod (nostruct-align/1vrkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.722874
/projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t2k-w0.5.mod(21):  Reading nostruct-align/1hmpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-7004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t2k-w0.5.mod (nostruct-align/1hmpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.645861
/projects/compbio/experiments/models.97/pdb/2h/2hrvA/nostruct-align/2hrvA.t2k-w0.5.mod(22):  Reading nostruct-align/2hrvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hrvA/nostruct-align/2hrvA.t2k-w0.5.mod (nostruct-align/2hrvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hrvA/nostruct-align/2hrvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.882904
/projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-w0.5.mod(22):  Reading nostruct-align/2tpsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8839/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-w0.5.mod (nostruct-align/2tpsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.097857
/projects/compbio/experiments/models.97/pdb/1i/1i82A/nostruct-align/1i82A.t2k-w0.5.mod(21):  Reading nostruct-align/1i82A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-25715/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i82A/nostruct-align/1i82A.t2k-w0.5.mod (nostruct-align/1i82A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i82A/nostruct-align/1i82A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.728893
/projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31713/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t2k-w0.5.mod (nostruct-align/1qhiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.269854
/projects/compbio/experiments/models.97/pdb/1f/1fh0A/nostruct-align/1fh0A.t2k-w0.5.mod(21):  Reading nostruct-align/1fh0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5992/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fh0A/nostruct-align/1fh0A.t2k-w0.5.mod (nostruct-align/1fh0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fh0A/nostruct-align/1fh0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.827871
/projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t2k-w0.5.mod(22):  Reading nostruct-align/1b4fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t2k-w0.5.mod (nostruct-align/1b4fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.238863
/projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t2k-w0.5.mod(21):  Reading nostruct-align/1fha.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-28426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t2k-w0.5.mod (nostruct-align/1fha.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.604851
/projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t2k-w0.5.mod(21):  Reading nostruct-align/1dupA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9447/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t2k-w0.5.mod (nostruct-align/1dupA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.978859
/projects/compbio/experiments/models.97/pdb/1h/1hv8A/nostruct-align/1hv8A.t2k-w0.5.mod(22):  Reading nostruct-align/1hv8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-6168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hv8A/nostruct-align/1hv8A.t2k-w0.5.mod (nostruct-align/1hv8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hv8A/nostruct-align/1hv8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.027899
/projects/compbio/experiments/models.97/pdb/1k/1kbaA/nostruct-align/1kbaA.t2k-w0.5.mod(21):  Reading nostruct-align/1kbaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29272/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbaA/nostruct-align/1kbaA.t2k-w0.5.mod (nostruct-align/1kbaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kbaA/nostruct-align/1kbaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.085899
/projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t2k-w0.5.mod(21):  Reading nostruct-align/1b4fG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-21350/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t2k-w0.5.mod (nostruct-align/1b4fG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.318859
/projects/compbio/experiments/models.97/pdb/1o/1oakA/nostruct-align/1oakA.t2k-w0.5.mod(21):  Reading nostruct-align/1oakA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2428/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oakA/nostruct-align/1oakA.t2k-w0.5.mod (nostruct-align/1oakA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oakA/nostruct-align/1oakA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.745892
/projects/compbio/experiments/models.97/pdb/1q/1qq1A/nostruct-align/1qq1A.t2k-w0.5.mod(22):  Reading nostruct-align/1qq1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8555/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq1A/nostruct-align/1qq1A.t2k-w0.5.mod (nostruct-align/1qq1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qq1A/nostruct-align/1qq1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.347908
/projects/compbio/experiments/models.97/pdb/1j/1jmeA/nostruct-align/1jmeA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmeA/nostruct-align/1jmeA.t2k-w0.5.mod (nostruct-align/1jmeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmeA/nostruct-align/1jmeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.040878
/projects/compbio/experiments/models.97/pdb/2b/2bnh/nostruct-align/2bnh.t2k-w0.5.mod(21):  Reading nostruct-align/2bnh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bnh/nostruct-align/2bnh.t2k-w0.5.mod (nostruct-align/2bnh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bnh/nostruct-align/2bnh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -34.284859
/projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t2k-w0.5.mod(22):  Reading nostruct-align/1cjxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t2k-w0.5.mod (nostruct-align/1cjxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.707853
/projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t2k-w0.5.mod(22):  Reading nostruct-align/1c94A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23051/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t2k-w0.5.mod (nostruct-align/1c94A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.031858
/projects/compbio/experiments/models.97/pdb/1m/1mrg/nostruct-align/1mrg.t2k-w0.5.mod(21):  Reading nostruct-align/1mrg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-5380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrg/nostruct-align/1mrg.t2k-w0.5.mod (nostruct-align/1mrg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mrg/nostruct-align/1mrg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.525854
/projects/compbio/experiments/models.97/pdb/1k/1k6iA/nostruct-align/1k6iA.t2k-w0.5.mod(22):  Reading nostruct-align/1k6iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1242/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6iA/nostruct-align/1k6iA.t2k-w0.5.mod (nostruct-align/1k6iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k6iA/nostruct-align/1k6iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.342882
/projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k-w0.5.mod(22):  Reading nostruct-align/1mrj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13494/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k-w0.5.mod (nostruct-align/1mrj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.459877
/projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t2k-w0.5.mod(21):  Reading nostruct-align/1fht.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-1331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t2k-w0.5.mod (nostruct-align/1fht.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.299891
/projects/compbio/experiments/models.97/pdb/1n/1nsyA/nostruct-align/1nsyA.t2k-w0.5.mod(21):  Reading nostruct-align/1nsyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsyA/nostruct-align/1nsyA.t2k-w0.5.mod (nostruct-align/1nsyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nsyA/nostruct-align/1nsyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.701870
/projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t2k-w0.5.mod(21):  Reading nostruct-align/4tsvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-1487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t2k-w0.5.mod (nostruct-align/4tsvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.388887
/projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t2k-w0.5.mod(21):  Reading nostruct-align/1e0aB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-1704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t2k-w0.5.mod (nostruct-align/1e0aB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.068869
/projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t2k-w0.5.mod(22):  Reading nostruct-align/1mrp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-2753/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t2k-w0.5.mod (nostruct-align/1mrp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.107874
/projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t2k-w0.5.mod(21):  Reading nostruct-align/1mrt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-14386/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t2k-w0.5.mod (nostruct-align/1mrt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.999863
/projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t2k-w0.5.mod(22):  Reading nostruct-align/4bcl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14376/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t2k-w0.5.mod (nostruct-align/4bcl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.678873
/projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t2k-w0.5.mod(21):  Reading nostruct-align/7atjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t2k-w0.5.mod (nostruct-align/7atjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.564903
/projects/compbio/experiments/models.97/pdb/1f/1fib/nostruct-align/1fib.t2k-w0.5.mod(21):  Reading nostruct-align/1fib.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-20419/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fib/nostruct-align/1fib.t2k-w0.5.mod (nostruct-align/1fib.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fib/nostruct-align/1fib.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.168865
/projects/compbio/experiments/models.97/pdb/1h/1hv9A/nostruct-align/1hv9A.t2k-w0.5.mod(21):  Reading nostruct-align/1hv9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-29566/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hv9A/nostruct-align/1hv9A.t2k-w0.5.mod (nostruct-align/1hv9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hv9A/nostruct-align/1hv9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.574903
/projects/compbio/experiments/models.97/pdb/1g/1gd7A/nostruct-align/1gd7A.t2k-w0.5.mod(21):  Reading nostruct-align/1gd7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-21679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd7A/nostruct-align/1gd7A.t2k-w0.5.mod (nostruct-align/1gd7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd7A/nostruct-align/1gd7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.170856
/projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-w0.5.mod(22):  Reading nostruct-align/1es5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-w0.5.mod (nostruct-align/1es5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1es5A/nostruct-align/1es5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.857870
/projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t2k-w0.5.mod(22):  Reading nostruct-align/2hddA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t2k-w0.5.mod (nostruct-align/2hddA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.306904
/projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t2k-w0.5.mod(21):  Reading nostruct-align/1qq2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4166/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t2k-w0.5.mod (nostruct-align/1qq2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.870865
/projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t2k-w0.5.mod(22):  Reading nostruct-align/1msc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11624/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t2k-w0.5.mod (nostruct-align/1msc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.841871
/projects/compbio/experiments/models.97/pdb/1f/1fil/nostruct-align/1fil.t2k-w0.5.mod(21):  Reading nostruct-align/1fil.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fil/nostruct-align/1fil.t2k-w0.5.mod (nostruct-align/1fil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fil/nostruct-align/1fil.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.148855
/projects/compbio/experiments/models.97/pdb/1k/1kilD/nostruct-align/1kilD.t2k-w0.5.mod(22):  Reading nostruct-align/1kilD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kilD/nostruct-align/1kilD.t2k-w0.5.mod (nostruct-align/1kilD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kilD/nostruct-align/1kilD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.972891
/projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t2k-w0.5.mod(21):  Reading nostruct-align/1msi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16014/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t2k-w0.5.mod (nostruct-align/1msi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.266870
/projects/compbio/experiments/models.97/pdb/1k/1kilE/nostruct-align/1kilE.t2k-w0.5.mod(22):  Reading nostruct-align/1kilE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kilE/nostruct-align/1kilE.t2k-w0.5.mod (nostruct-align/1kilE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kilE/nostruct-align/1kilE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.926867
/projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ae9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25376/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t2k-w0.5.mod (nostruct-align/1ae9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.429903
/projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-w0.5.mod(22):  Reading nostruct-align/1msk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12863/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-w0.5.mod (nostruct-align/1msk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.198858
/projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t2k-w0.5.mod(22):  Reading nostruct-align/1fit.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27565/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t2k-w0.5.mod (nostruct-align/1fit.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.085861
/projects/compbio/experiments/models.97/pdb/1c/1cl7I/nostruct-align/1cl7I.t2k-w0.5.mod(22):  Reading nostruct-align/1cl7I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-566/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl7I/nostruct-align/1cl7I.t2k-w0.5.mod (nostruct-align/1cl7I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cl7I/nostruct-align/1cl7I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.282883
/projects/compbio/experiments/models.97/pdb/1e/1e0bA/nostruct-align/1e0bA.t2k-w0.5.mod(22):  Reading nostruct-align/1e0bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0bA/nostruct-align/1e0bA.t2k-w0.5.mod (nostruct-align/1e0bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e0bA/nostruct-align/1e0bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.429884
/projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t2k-w0.5.mod(22):  Reading nostruct-align/1fiy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t2k-w0.5.mod (nostruct-align/1fiy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.334864
/projects/compbio/experiments/models.97/pdb/2w/2wsyA/nostruct-align/2wsyA.t2k-w0.5.mod(21):  Reading nostruct-align/2wsyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-27950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2w/2wsyA/nostruct-align/2wsyA.t2k-w0.5.mod (nostruct-align/2wsyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2w/2wsyA/nostruct-align/2wsyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.716877
/projects/compbio/experiments/models.97/pdb/2w/2wsyB/nostruct-align/2wsyB.t2k-w0.5.mod(21):  Reading nostruct-align/2wsyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19599/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2w/2wsyB/nostruct-align/2wsyB.t2k-w0.5.mod (nostruct-align/2wsyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2w/2wsyB/nostruct-align/2wsyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.164911
/projects/compbio/experiments/models.97/pdb/1i/1ik6A/nostruct-align/1ik6A.t2k-w0.5.mod(22):  Reading nostruct-align/1ik6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ik6A/nostruct-align/1ik6A.t2k-w0.5.mod (nostruct-align/1ik6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ik6A/nostruct-align/1ik6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.964853
/projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-w0.5.mod(22):  Reading nostruct-align/1e7lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11524/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-w0.5.mod (nostruct-align/1e7lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e7lA/nostruct-align/1e7lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.435894
/projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t2k-w0.5.mod (nostruct-align/1qhkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.051893
/projects/compbio/experiments/models.97/pdb/1d/1dw0A/nostruct-align/1dw0A.t2k-w0.5.mod(22):  Reading nostruct-align/1dw0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dw0A/nostruct-align/1dw0A.t2k-w0.5.mod (nostruct-align/1dw0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dw0A/nostruct-align/1dw0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.298874
/projects/compbio/experiments/models.97/pdb/1f/1fftC/nostruct-align/1fftC.t2k-w0.5.mod(21):  Reading nostruct-align/1fftC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-27285/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fftC/nostruct-align/1fftC.t2k-w0.5.mod (nostruct-align/1fftC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fftC/nostruct-align/1fftC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.251858
/projects/compbio/experiments/models.97/pdb/1f/1f3rB/nostruct-align/1f3rB.t2k-w0.5.mod(21):  Reading nostruct-align/1f3rB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-14405/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3rB/nostruct-align/1f3rB.t2k-w0.5.mod (nostruct-align/1f3rB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3rB/nostruct-align/1f3rB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.255907
/projects/compbio/experiments/models.97/pdb/1g/1gd8A/nostruct-align/1gd8A.t2k-w0.5.mod(22):  Reading nostruct-align/1gd8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14111/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gd8A/nostruct-align/1gd8A.t2k-w0.5.mod (nostruct-align/1gd8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gd8A/nostruct-align/1gd8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.811884
/projects/compbio/experiments/models.97/pdb/1c/1c0nA/nostruct-align/1c0nA.t2k-w0.5.mod(21):  Reading nostruct-align/1c0nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-8038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0nA/nostruct-align/1c0nA.t2k-w0.5.mod (nostruct-align/1c0nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c0nA/nostruct-align/1c0nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.406864
/projects/compbio/experiments/models.97/pdb/1e/1es6A/nostruct-align/1es6A.t2k-w0.5.mod(21):  Reading nostruct-align/1es6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es6A/nostruct-align/1es6A.t2k-w0.5.mod (nostruct-align/1es6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1es6A/nostruct-align/1es6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.454853
/projects/compbio/experiments/models.97/pdb/1i/1iqaA/nostruct-align/1iqaA.t2k-w0.5.mod(22):  Reading nostruct-align/1iqaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqaA/nostruct-align/1iqaA.t2k-w0.5.mod (nostruct-align/1iqaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iqaA/nostruct-align/1iqaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.368853
/projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t2k-w0.5.mod(21):  Reading nostruct-align/1qouA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-12233/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t2k-w0.5.mod (nostruct-align/1qouA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.864910
/projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-w0.5.mod(22):  Reading nostruct-align/1cl8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31863/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-w0.5.mod (nostruct-align/1cl8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cl8A/nostruct-align/1cl8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.442894
/projects/compbio/experiments/models.97/pdb/1c/1c96A/nostruct-align/1c96A.t2k-w0.5.mod(22):  Reading nostruct-align/1c96A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8404/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c96A/nostruct-align/1c96A.t2k-w0.5.mod (nostruct-align/1c96A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c96A/nostruct-align/1c96A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.050875
/projects/compbio/experiments/models.97/pdb/1k/1kimA/nostruct-align/1kimA.t2k-w0.5.mod(21):  Reading nostruct-align/1kimA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-885/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kimA/nostruct-align/1kimA.t2k-w0.5.mod (nostruct-align/1kimA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kimA/nostruct-align/1kimA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.217888
/projects/compbio/experiments/models.97/pdb/1g/1g7aA/nostruct-align/1g7aA.t2k-w0.5.mod(22):  Reading nostruct-align/1g7aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24308/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7aA/nostruct-align/1g7aA.t2k-w0.5.mod (nostruct-align/1g7aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7aA/nostruct-align/1g7aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.473879
/projects/compbio/experiments/models.97/pdb/1g/1g7aB/nostruct-align/1g7aB.t2k-w0.5.mod(22):  Reading nostruct-align/1g7aB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7aB/nostruct-align/1g7aB.t2k-w0.5.mod (nostruct-align/1g7aB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7aB/nostruct-align/1g7aB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.689882
/projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t2k-w0.5.mod(21):  Reading nostruct-align/1wgjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t2k-w0.5.mod (nostruct-align/1wgjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.741863
/projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t2k-w0.5.mod(21):  Reading nostruct-align/1eceA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-30169/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t2k-w0.5.mod (nostruct-align/1eceA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.918877
/projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t2k-w0.5.mod(21):  Reading nostruct-align/1a28A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-23521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t2k-w0.5.mod (nostruct-align/1a28A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.014875
/projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-w0.5.mod(22):  Reading nostruct-align/1e0cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-398/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-w0.5.mod (nostruct-align/1e0cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e0cA/nostruct-align/1e0cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.152866
/projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-w0.5.mod(22):  Reading nostruct-align/1t1dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-w0.5.mod (nostruct-align/1t1dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.718870
/projects/compbio/experiments/models.97/pdb/1h/1ho1A/nostruct-align/1ho1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ho1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-13033/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ho1A/nostruct-align/1ho1A.t2k-w0.5.mod (nostruct-align/1ho1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1ho1A/nostruct-align/1ho1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.270874
/projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t2k-w0.5.mod(21):  Reading nostruct-align/1akeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-12497/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t2k-w0.5.mod (nostruct-align/1akeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.025904
/projects/compbio/experiments/models.97/pdb/1p/1plfA/nostruct-align/1plfA.t2k-w0.5.mod(21):  Reading nostruct-align/1plfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-24098/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plfA/nostruct-align/1plfA.t2k-w0.5.mod (nostruct-align/1plfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1plfA/nostruct-align/1plfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.407885
/projects/compbio/experiments/models.97/pdb/1i/1i85A/nostruct-align/1i85A.t2k-w0.5.mod(21):  Reading nostruct-align/1i85A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-15317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i85A/nostruct-align/1i85A.t2k-w0.5.mod (nostruct-align/1i85A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i85A/nostruct-align/1i85A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.599903
/projects/compbio/experiments/models.97/pdb/1i/1i6wA/nostruct-align/1i6wA.t2k-w0.5.mod(22):  Reading nostruct-align/1i6wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21283/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i6wA/nostruct-align/1i6wA.t2k-w0.5.mod (nostruct-align/1i6wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i6wA/nostruct-align/1i6wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.614861
/projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t2k-w0.5.mod(22):  Reading nostruct-align/1qhlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t2k-w0.5.mod (nostruct-align/1qhlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.933903
/projects/compbio/experiments/models.97/pdb/1m/1mtx/nostruct-align/1mtx.t2k-w0.5.mod(21):  Reading nostruct-align/1mtx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtx/nostruct-align/1mtx.t2k-w0.5.mod (nostruct-align/1mtx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mtx/nostruct-align/1mtx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.339907
/projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-w0.5.mod(22):  Reading nostruct-align/1dusA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26342/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-w0.5.mod (nostruct-align/1dusA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dusA/nostruct-align/1dusA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.495909
/projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t2k-w0.5.mod(21):  Reading nostruct-align/1fkd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23366/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t2k-w0.5.mod (nostruct-align/1fkd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.367870
/projects/compbio/experiments/models.97/pdb/1f/1fkf/nostruct-align/1fkf.t2k-w0.5.mod(21):  Reading nostruct-align/1fkf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-16489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkf/nostruct-align/1fkf.t2k-w0.5.mod (nostruct-align/1fkf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fkf/nostruct-align/1fkf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.367870
/projects/compbio/experiments/models.97/pdb/1e/1es7B/nostruct-align/1es7B.t2k-w0.5.mod(22):  Reading nostruct-align/1es7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27952/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es7B/nostruct-align/1es7B.t2k-w0.5.mod (nostruct-align/1es7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1es7B/nostruct-align/1es7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.905853
/projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t2k-w0.5.mod(21):  Reading nostruct-align/1bp3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-5641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t2k-w0.5.mod (nostruct-align/1bp3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.306902
/projects/compbio/experiments/models.97/pdb/1b/1bp3B/nostruct-align/1bp3B.t2k-w0.5.mod(21):  Reading nostruct-align/1bp3B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24967/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp3B/nostruct-align/1bp3B.t2k-w0.5.mod (nostruct-align/1bp3B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bp3B/nostruct-align/1bp3B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.769852
/projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t2k-w0.5.mod(21):  Reading nostruct-align/1qq4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t2k-w0.5.mod (nostruct-align/1qq4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.355875
/projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t2k-w0.5.mod(21):  Reading nostruct-align/1fkj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t2k-w0.5.mod (nostruct-align/1fkj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.417875
/projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t2k-w0.5.mod(21):  Reading nostruct-align/1ayyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-14589/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t2k-w0.5.mod (nostruct-align/1ayyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.553881
/projects/compbio/experiments/models.97/pdb/1e/1eybA/nostruct-align/1eybA.t2k-w0.5.mod(22):  Reading nostruct-align/1eybA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eybA/nostruct-align/1eybA.t2k-w0.5.mod (nostruct-align/1eybA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eybA/nostruct-align/1eybA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.798885
/projects/compbio/experiments/models.97/pdb/5e/5er2E/nostruct-align/5er2E.t2k-w0.5.mod(21):  Reading nostruct-align/5er2E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-463/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5e/5er2E/nostruct-align/5er2E.t2k-w0.5.mod (nostruct-align/5er2E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5e/5er2E/nostruct-align/5er2E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.728853
/projects/compbio/experiments/models.97/pdb/1q/1qovH/nostruct-align/1qovH.t2k-w0.5.mod(21):  Reading nostruct-align/1qovH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12311/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qovH/nostruct-align/1qovH.t2k-w0.5.mod (nostruct-align/1qovH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qovH/nostruct-align/1qovH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.858910
/projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t2k-w0.5.mod(21):  Reading nostruct-align/1shaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-4013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t2k-w0.5.mod (nostruct-align/1shaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.426874
/projects/compbio/experiments/models.97/pdb/1a/1aroP/nostruct-align/1aroP.t2k-w0.5.mod(21):  Reading nostruct-align/1aroP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-9360/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aroP/nostruct-align/1aroP.t2k-w0.5.mod (nostruct-align/1aroP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aroP/nostruct-align/1aroP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.341892
/projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t2k-w0.5.mod(21):  Reading nostruct-align/1ecfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t2k-w0.5.mod (nostruct-align/1ecfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.074854
/projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t2k-w0.5.mod(21):  Reading nostruct-align/3tss.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-26435/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t2k-w0.5.mod (nostruct-align/3tss.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.498878
/projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t2k-w0.5.mod(21):  Reading nostruct-align/1ecfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3323/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t2k-w0.5.mod (nostruct-align/1ecfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.945850
/projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-w0.5.mod(22):  Reading nostruct-align/1mun.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-w0.5.mod (nostruct-align/1mun.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.458891
/projects/compbio/experiments/models.97/pdb/1o/1opaA/nostruct-align/1opaA.t2k-w0.5.mod(21):  Reading nostruct-align/1opaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29804/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opaA/nostruct-align/1opaA.t2k-w0.5.mod (nostruct-align/1opaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1opaA/nostruct-align/1opaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.300894
/projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t2k-w0.5.mod(21):  Reading nostruct-align/1mup.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-25317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t2k-w0.5.mod (nostruct-align/1mup.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.881876
/projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t2k-w0.5.mod(21):  Reading nostruct-align/1mut.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-11747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t2k-w0.5.mod (nostruct-align/1mut.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.267855
/projects/compbio/experiments/models.97/pdb/1i/1i86A/nostruct-align/1i86A.t2k-w0.5.mod(22):  Reading nostruct-align/1i86A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9883/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i86A/nostruct-align/1i86A.t2k-w0.5.mod (nostruct-align/1i86A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i86A/nostruct-align/1i86A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.624895
/projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t2k-w0.5.mod(21):  Reading nostruct-align/1bglA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28087/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t2k-w0.5.mod (nostruct-align/1bglA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.067869
/projects/compbio/experiments/models.97/pdb/1f/1f52A/nostruct-align/1f52A.t2k-w0.5.mod(22):  Reading nostruct-align/1f52A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f52A/nostruct-align/1f52A.t2k-w0.5.mod (nostruct-align/1f52A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f52A/nostruct-align/1f52A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.241865
/projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ce0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3449/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t2k-w0.5.mod (nostruct-align/1ce0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.885908
/projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k-w0.5.mod(22):  Reading nostruct-align/1c0pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10896/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k-w0.5.mod (nostruct-align/1c0pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c0pA/nostruct-align/1c0pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.758879
/projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-w0.5.mod(22):  Reading nostruct-align/1iqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-w0.5.mod (nostruct-align/1iqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iqcA/nostruct-align/1iqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.879904
/projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-w0.5.mod(22):  Reading nostruct-align/1qq5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7682/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-w0.5.mod (nostruct-align/1qq5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.809879
/projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t2k-w0.5.mod(21):  Reading nostruct-align/1flp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10576/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t2k-w0.5.mod (nostruct-align/1flp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.213894
/projects/compbio/experiments/models.97/pdb/1d/1dgaA/nostruct-align/1dgaA.t2k-w0.5.mod(21):  Reading nostruct-align/1dgaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgaA/nostruct-align/1dgaA.t2k-w0.5.mod (nostruct-align/1dgaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgaA/nostruct-align/1dgaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.207893
/projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t2k-w0.5.mod(22):  Reading nostruct-align/1ixmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t2k-w0.5.mod (nostruct-align/1ixmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.257891
/projects/compbio/experiments/models.97/pdb/1s/1shbA/nostruct-align/1shbA.t2k-w0.5.mod(21):  Reading nostruct-align/1shbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shbA/nostruct-align/1shbA.t2k-w0.5.mod (nostruct-align/1shbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shbA/nostruct-align/1shbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.423882
/projects/compbio/experiments/models.97/pdb/1m/1mvi/nostruct-align/1mvi.t2k-w0.5.mod(21):  Reading nostruct-align/1mvi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16304/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mvi/nostruct-align/1mvi.t2k-w0.5.mod (nostruct-align/1mvi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mvi/nostruct-align/1mvi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.957855
/projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t2k-w0.5.mod(21):  Reading nostruct-align/1ixmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t2k-w0.5.mod (nostruct-align/1ixmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.313892
/projects/compbio/experiments/models.97/pdb/1m/1mvj/nostruct-align/1mvj.t2k-w0.5.mod(21):  Reading nostruct-align/1mvj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-30373/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mvj/nostruct-align/1mvj.t2k-w0.5.mod (nostruct-align/1mvj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mvj/nostruct-align/1mvj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.988897
/projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t2k-w0.5.mod(21):  Reading nostruct-align/1fuiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32007/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t2k-w0.5.mod (nostruct-align/1fuiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.379854
/projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t2k-w0.5.mod(22):  Reading nostruct-align/1qadA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t2k-w0.5.mod (nostruct-align/1qadA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.251898
/projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t2k-w0.5.mod(21):  Reading nostruct-align/1opbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-20642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t2k-w0.5.mod (nostruct-align/1opbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.308861
/projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t2k-w0.5.mod(22):  Reading nostruct-align/2brz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t2k-w0.5.mod (nostruct-align/2brz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.091909
/projects/compbio/experiments/models.97/pdb/1i/1ik9A/nostruct-align/1ik9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ik9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5996/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ik9A/nostruct-align/1ik9A.t2k-w0.5.mod (nostruct-align/1ik9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ik9A/nostruct-align/1ik9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.231878
/projects/compbio/experiments/models.97/pdb/2b/2blsA/nostruct-align/2blsA.t2k-w0.5.mod(21):  Reading nostruct-align/2blsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20350/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2blsA/nostruct-align/2blsA.t2k-w0.5.mod (nostruct-align/2blsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2blsA/nostruct-align/2blsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.809853
/projects/compbio/experiments/models.97/pdb/1i/1ik9C/nostruct-align/1ik9C.t2k-w0.5.mod(22):  Reading nostruct-align/1ik9C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7034/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ik9C/nostruct-align/1ik9C.t2k-w0.5.mod (nostruct-align/1ik9C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ik9C/nostruct-align/1ik9C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.820883
/projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t2k-w0.5.mod(21):  Reading nostruct-align/1b4kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24920/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t2k-w0.5.mod (nostruct-align/1b4kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.767859
/projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k-w0.5.mod(21):  Reading nostruct-align/1fmb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-6145/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k-w0.5.mod (nostruct-align/1fmb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.725908
/projects/compbio/experiments/models.97/pdb/1f/1f53A/nostruct-align/1f53A.t2k-w0.5.mod(21):  Reading nostruct-align/1f53A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-813/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f53A/nostruct-align/1f53A.t2k-w0.5.mod (nostruct-align/1f53A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f53A/nostruct-align/1f53A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.887873
/projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-w0.5.mod(22):  Reading nostruct-align/1f3uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-w0.5.mod (nostruct-align/1f3uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3uA/nostruct-align/1f3uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.965866
/projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-w0.5.mod(22):  Reading nostruct-align/1f3uB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9213/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-w0.5.mod (nostruct-align/1f3uB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3uB/nostruct-align/1f3uB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.955883
/projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-w0.5.mod(22):  Reading nostruct-align/1psrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13613/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-w0.5.mod (nostruct-align/1psrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.389906
/projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-w0.5.mod(22):  Reading nostruct-align/1es9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-654/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-w0.5.mod (nostruct-align/1es9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1es9A/nostruct-align/1es9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.792898
/projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t2k-w0.5.mod(22):  Reading nostruct-align/2hdhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6165/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t2k-w0.5.mod (nostruct-align/2hdhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.516884
/projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t2k-w0.5.mod(22):  Reading nostruct-align/1fmk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-2446/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t2k-w0.5.mod (nostruct-align/1fmk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.231903
/projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t2k-w0.5.mod(21):  Reading nostruct-align/2utgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13325/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t2k-w0.5.mod (nostruct-align/2utgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.662893
/projects/compbio/experiments/models.97/pdb/1g/1g7dA/nostruct-align/1g7dA.t2k-w0.5.mod(21):  Reading nostruct-align/1g7dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15752/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7dA/nostruct-align/1g7dA.t2k-w0.5.mod (nostruct-align/1g7dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7dA/nostruct-align/1g7dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.391880
/projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t2k-w0.5.mod(21):  Reading nostruct-align/1shcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-19364/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t2k-w0.5.mod (nostruct-align/1shcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.249899
/projects/compbio/experiments/models.97/pdb/1j/1jv2A/nostruct-align/1jv2A.t2k-w0.5.mod(21):  Reading nostruct-align/1jv2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-20894/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jv2A/nostruct-align/1jv2A.t2k-w0.5.mod (nostruct-align/1jv2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jv2A/nostruct-align/1jv2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.601854
/projects/compbio/experiments/models.97/pdb/1j/1jv2B/nostruct-align/1jv2B.t2k-w0.5.mod(21):  Reading nostruct-align/1jv2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27603/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jv2B/nostruct-align/1jv2B.t2k-w0.5.mod (nostruct-align/1jv2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jv2B/nostruct-align/1jv2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -36.580891
/projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-w0.5.mod(22):  Reading nostruct-align/1id0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-13405/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-w0.5.mod (nostruct-align/1id0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1id0A/nostruct-align/1id0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.317900
/projects/compbio/experiments/models.97/pdb/1g/1gqpA/nostruct-align/1gqpA.t2k-w0.5.mod(22):  Reading nostruct-align/1gqpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-18972/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqpA/nostruct-align/1gqpA.t2k-w0.5.mod (nostruct-align/1gqpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gqpA/nostruct-align/1gqpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.537889
/projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t2k-w0.5.mod(21):  Reading nostruct-align/1qoxN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-31480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t2k-w0.5.mod (nostruct-align/1qoxN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.319855
/projects/compbio/experiments/models.97/pdb/1i/1ibrB/nostruct-align/1ibrB.t2k-w0.5.mod(22):  Reading nostruct-align/1ibrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-525/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibrB/nostruct-align/1ibrB.t2k-w0.5.mod (nostruct-align/1ibrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ibrB/nostruct-align/1ibrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.154865
/projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t2k-w0.5.mod(21):  Reading nostruct-align/1qaeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t2k-w0.5.mod (nostruct-align/1qaeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.657864
/projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k-w0.5.mod(22):  Reading nostruct-align/1dnlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k-w0.5.mod (nostruct-align/1dnlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dnlA/nostruct-align/1dnlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.582895
/projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t2k-w0.5.mod(21):  Reading nostruct-align/1akhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-7081/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t2k-w0.5.mod (nostruct-align/1akhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.306890
/projects/compbio/experiments/models.97/pdb/1e/1e0fI/nostruct-align/1e0fI.t2k-w0.5.mod(21):  Reading nostruct-align/1e0fI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27941/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0fI/nostruct-align/1e0fI.t2k-w0.5.mod (nostruct-align/1e0fI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e0fI/nostruct-align/1e0fI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.424862
/projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t2k-w0.5.mod(21):  Reading nostruct-align/1akhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29103/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t2k-w0.5.mod (nostruct-align/1akhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.664885
/projects/compbio/experiments/models.97/pdb/1e/1ejrB/nostruct-align/1ejrB.t2k-w0.5.mod(21):  Reading nostruct-align/1ejrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2390/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejrB/nostruct-align/1ejrB.t2k-w0.5.mod (nostruct-align/1ejrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejrB/nostruct-align/1ejrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.684898
/projects/compbio/experiments/models.97/pdb/1e/1ejrC/nostruct-align/1ejrC.t2k-w0.5.mod(22):  Reading nostruct-align/1ejrC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25858/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejrC/nostruct-align/1ejrC.t2k-w0.5.mod (nostruct-align/1ejrC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ejrC/nostruct-align/1ejrC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.653862
/projects/compbio/experiments/models.97/pdb/2b/2bn2A/nostruct-align/2bn2A.t2k-w0.5.mod(21):  Reading nostruct-align/2bn2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bn2A/nostruct-align/2bn2A.t2k-w0.5.mod (nostruct-align/2bn2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bn2A/nostruct-align/2bn2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.705877
/projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t2k-w0.5.mod(21):  Reading nostruct-align/2bltA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-4107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t2k-w0.5.mod (nostruct-align/2bltA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.307899
/projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-w0.5.mod(22):  Reading nostruct-align/1i88A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-5779/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-w0.5.mod (nostruct-align/1i88A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i88A/nostruct-align/1i88A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.806906
/projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8585/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-w0.5.mod (nostruct-align/1qhoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhoA/nostruct-align/1qhoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.888906
/projects/compbio/experiments/models.97/pdb/1f/1fh6A/nostruct-align/1fh6A.t2k-w0.5.mod(21):  Reading nostruct-align/1fh6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-10032/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fh6A/nostruct-align/1fh6A.t2k-w0.5.mod (nostruct-align/1fh6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fh6A/nostruct-align/1fh6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.834890
/projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-w0.5.mod(22):  Reading nostruct-align/1fna.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-w0.5.mod (nostruct-align/1fna.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.427868
/projects/compbio/experiments/models.97/pdb/1f/1f3vA/nostruct-align/1f3vA.t2k-w0.5.mod(22):  Reading nostruct-align/1f3vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26678/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3vA/nostruct-align/1f3vA.t2k-w0.5.mod (nostruct-align/1f3vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3vA/nostruct-align/1f3vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.288855
/projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t2k-w0.5.mod(22):  Reading nostruct-align/1fnc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27184/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t2k-w0.5.mod (nostruct-align/1fnc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.510902
/projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t2k-w0.5.mod(21):  Reading nostruct-align/1fnd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-24968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t2k-w0.5.mod (nostruct-align/1fnd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.364876
/projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t2k-w0.5.mod(21):  Reading nostruct-align/1c20A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17031/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t2k-w0.5.mod (nostruct-align/1c20A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.850880
/projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t2k-w0.5.mod(21):  Reading nostruct-align/1fnf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-12989/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t2k-w0.5.mod (nostruct-align/1fnf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.837881
/projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-w0.5.mod(22):  Reading nostruct-align/1duvG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25907/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-w0.5.mod (nostruct-align/1duvG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1duvG/nostruct-align/1duvG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.379868
/projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t2k-w0.5.mod(21):  Reading nostruct-align/1bnxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16341/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t2k-w0.5.mod (nostruct-align/1bnxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.931879
/projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t2k-w0.5.mod(22):  Reading nostruct-align/1qq7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t2k-w0.5.mod (nostruct-align/1qq7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.722858
/projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t2k-w0.5.mod(22):  Reading nostruct-align/1qoyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t2k-w0.5.mod (nostruct-align/1qoyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.797903
/projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t2k-w0.5.mod(21):  Reading nostruct-align/1mxa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-16805/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t2k-w0.5.mod (nostruct-align/1mxa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.581873
/projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t2k-w0.5.mod(21):  Reading nostruct-align/1mxb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2645/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t2k-w0.5.mod (nostruct-align/1mxb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.054878
/projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-w0.5.mod(22):  Reading nostruct-align/1jmkC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30780/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-w0.5.mod (nostruct-align/1jmkC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmkC/nostruct-align/1jmkC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.637888
/projects/compbio/experiments/models.97/pdb/1g/1g7eA/nostruct-align/1g7eA.t2k-w0.5.mod(21):  Reading nostruct-align/1g7eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8210/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7eA/nostruct-align/1g7eA.t2k-w0.5.mod (nostruct-align/1g7eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7eA/nostruct-align/1g7eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.886871
/projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-w0.5.mod(22):  Reading nostruct-align/1eyeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-w0.5.mod (nostruct-align/1eyeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eyeA/nostruct-align/1eyeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.554852
/projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t2k-w0.5.mod(21):  Reading nostruct-align/1xypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-19031/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t2k-w0.5.mod (nostruct-align/1xypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.262896
/projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t2k-w0.5.mod(21):  Reading nostruct-align/1shdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-25916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t2k-w0.5.mod (nostruct-align/1shdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.457872
/projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-w0.5.mod(22):  Reading nostruct-align/1d4aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26082/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-w0.5.mod (nostruct-align/1d4aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.819855
/projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t2k-w0.5.mod(22):  Reading nostruct-align/6paxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t2k-w0.5.mod (nostruct-align/6paxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.095881
/projects/compbio/experiments/models.97/pdb/1f/1fukA/nostruct-align/1fukA.t2k-w0.5.mod(21):  Reading nostruct-align/1fukA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-7252/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fukA/nostruct-align/1fukA.t2k-w0.5.mod (nostruct-align/1fukA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fukA/nostruct-align/1fukA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.663877
/projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t2k-w0.5.mod(21):  Reading nostruct-align/1eciA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26066/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t2k-w0.5.mod (nostruct-align/1eciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.094858
/projects/compbio/experiments/models.97/pdb/1i/1id1A/nostruct-align/1id1A.t2k-w0.5.mod(22):  Reading nostruct-align/1id1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15949/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1id1A/nostruct-align/1id1A.t2k-w0.5.mod (nostruct-align/1id1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1id1A/nostruct-align/1id1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.222889
/projects/compbio/experiments/models.97/pdb/1e/1eciB/nostruct-align/1eciB.t2k-w0.5.mod(21):  Reading nostruct-align/1eciB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-6119/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eciB/nostruct-align/1eciB.t2k-w0.5.mod (nostruct-align/1eciB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eciB/nostruct-align/1eciB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.110905
/projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t2k-w0.5.mod(21):  Reading nostruct-align/1uae.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-11601/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t2k-w0.5.mod (nostruct-align/1uae.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.562881
/projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t2k-w0.5.mod(22):  Reading nostruct-align/1uag.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t2k-w0.5.mod (nostruct-align/1uag.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.289894
/projects/compbio/experiments/models.97/pdb/1f/1ffyA/nostruct-align/1ffyA.t2k-w0.5.mod(21):  Reading nostruct-align/1ffyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-15109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ffyA/nostruct-align/1ffyA.t2k-w0.5.mod (nostruct-align/1ffyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ffyA/nostruct-align/1ffyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.140884
/projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-w0.5.mod(22):  Reading nostruct-align/1jfbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-w0.5.mod (nostruct-align/1jfbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfbA/nostruct-align/1jfbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.855898
/projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t2k-w0.5.mod(21):  Reading nostruct-align/1ce3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15796/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t2k-w0.5.mod (nostruct-align/1ce3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.854858
/projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t2k-w0.5.mod(21):  Reading nostruct-align/1bp7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t2k-w0.5.mod (nostruct-align/1bp7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.660862
/projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t2k-w0.5.mod(22):  Reading nostruct-align/1qq8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t2k-w0.5.mod (nostruct-align/1qq8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.614906
/projects/compbio/experiments/models.97/pdb/1g/1g7fA/nostruct-align/1g7fA.t2k-w0.5.mod(22):  Reading nostruct-align/1g7fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-29369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7fA/nostruct-align/1g7fA.t2k-w0.5.mod (nostruct-align/1g7fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7fA/nostruct-align/1g7fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.897892
/projects/compbio/experiments/models.97/pdb/9a/9apiA/nostruct-align/9apiA.t2k-w0.5.mod(21):  Reading nostruct-align/9apiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18977/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9a/9apiA/nostruct-align/9apiA.t2k-w0.5.mod (nostruct-align/9apiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9a/9apiA/nostruct-align/9apiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.695898
/projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t2k-w0.5.mod(21):  Reading nostruct-align/1d4bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-24882/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t2k-w0.5.mod (nostruct-align/1d4bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.836859
/projects/compbio/experiments/models.97/pdb/9a/9apiB/nostruct-align/9apiB.t2k-w0.5.mod(21):  Reading nostruct-align/9apiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-13019/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9a/9apiB/nostruct-align/9apiB.t2k-w0.5.mod (nostruct-align/9apiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9a/9apiB/nostruct-align/9apiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.490902
/projects/compbio/experiments/models.97/pdb/1j/1jv4A/nostruct-align/1jv4A.t2k-w0.5.mod(22):  Reading nostruct-align/1jv4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-1162/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jv4A/nostruct-align/1jv4A.t2k-w0.5.mod (nostruct-align/1jv4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jv4A/nostruct-align/1jv4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.853910
/projects/compbio/experiments/models.97/pdb/1m/1myn/nostruct-align/1myn.t2k-w0.5.mod(21):  Reading nostruct-align/1myn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1myn/nostruct-align/1myn.t2k-w0.5.mod (nostruct-align/1myn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1myn/nostruct-align/1myn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.934889
/projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t2k-w0.5.mod(22):  Reading nostruct-align/1qagA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12299/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t2k-w0.5.mod (nostruct-align/1qagA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.620876
/projects/compbio/experiments/models.97/pdb/1m/1myo/nostruct-align/1myo.t2k-w0.5.mod(21):  Reading nostruct-align/1myo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-28103/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1myo/nostruct-align/1myo.t2k-w0.5.mod (nostruct-align/1myo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1myo/nostruct-align/1myo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.714905
/projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t2k-w0.5.mod(21):  Reading nostruct-align/1ubi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t2k-w0.5.mod (nostruct-align/1ubi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.301907
/projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t2k-w0.5.mod(21):  Reading nostruct-align/1myt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-2495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t2k-w0.5.mod (nostruct-align/1myt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.126869
/projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9834/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k-w0.5.mod (nostruct-align/1qhqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhqA/nostruct-align/1qhqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.767900
/projects/compbio/experiments/models.97/pdb/1u/1ubq/nostruct-align/1ubq.t2k-w0.5.mod(21):  Reading nostruct-align/1ubq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubq/nostruct-align/1ubq.t2k-w0.5.mod (nostruct-align/1ubq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ubq/nostruct-align/1ubq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.268854
/projects/compbio/experiments/models.97/pdb/1f/1f56A/nostruct-align/1f56A.t2k-w0.5.mod(21):  Reading nostruct-align/1f56A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-7205/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f56A/nostruct-align/1f56A.t2k-w0.5.mod (nostruct-align/1f56A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f56A/nostruct-align/1f56A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.171885
/projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t2k-w0.5.mod(21):  Reading nostruct-align/1ce4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t2k-w0.5.mod (nostruct-align/1ce4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.761869
/projects/compbio/experiments/models.97/pdb/1c/1ccvA/nostruct-align/1ccvA.t2k-w0.5.mod(22):  Reading nostruct-align/1ccvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-7576/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccvA/nostruct-align/1ccvA.t2k-w0.5.mod (nostruct-align/1ccvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ccvA/nostruct-align/1ccvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.018858
/projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t2k-w0.5.mod(21):  Reading nostruct-align/7taa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-2986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t2k-w0.5.mod (nostruct-align/7taa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.832878
/projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t2k-w0.5.mod(21):  Reading nostruct-align/1oasA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-10353/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t2k-w0.5.mod (nostruct-align/1oasA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.560909
/projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-w0.5.mod(22):  Reading nostruct-align/1qq9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-w0.5.mod (nostruct-align/1qq9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qq9A/nostruct-align/1qq9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.669861
/projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t2k-w0.5.mod(21):  Reading nostruct-align/1uby.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-7388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t2k-w0.5.mod (nostruct-align/1uby.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.258911
/projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k-w0.5.mod(22):  Reading nostruct-align/1lmb3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3321/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k-w0.5.mod (nostruct-align/1lmb3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.832863
/projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k-w0.5.mod(22):  Reading nostruct-align/1kk1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26189/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k-w0.5.mod (nostruct-align/1kk1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kk1A/nostruct-align/1kk1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.125879
/projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k-w0.5.mod(22):  Reading nostruct-align/1hfoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-22854/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k-w0.5.mod (nostruct-align/1hfoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfoA/nostruct-align/1hfoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.007906
/projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t2k-w0.5.mod(21):  Reading nostruct-align/1shfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21373/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t2k-w0.5.mod (nostruct-align/1shfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.699873
/projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t2k-w0.5.mod(21):  Reading nostruct-align/1fps.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-11289/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t2k-w0.5.mod (nostruct-align/1fps.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.006870
/projects/compbio/experiments/models.97/pdb/1m/1mzm/nostruct-align/1mzm.t2k-w0.5.mod(21):  Reading nostruct-align/1mzm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17110/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mzm/nostruct-align/1mzm.t2k-w0.5.mod (nostruct-align/1mzm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mzm/nostruct-align/1mzm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.691870
/projects/compbio/experiments/models.97/pdb/1v/1vrtA/nostruct-align/1vrtA.t2k-w0.5.mod(21):  Reading nostruct-align/1vrtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vrtA/nostruct-align/1vrtA.t2k-w0.5.mod (nostruct-align/1vrtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vrtA/nostruct-align/1vrtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.061893
/projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t2k-w0.5.mod(22):  Reading nostruct-align/1uch.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17268/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t2k-w0.5.mod (nostruct-align/1uch.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.112900
/projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t2k-w0.5.mod(22):  Reading nostruct-align/16vpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-7887/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t2k-w0.5.mod (nostruct-align/16vpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.809895
/projects/compbio/experiments/models.97/pdb/1f/1fh9A/nostruct-align/1fh9A.t2k-w0.5.mod(22):  Reading nostruct-align/1fh9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3923/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fh9A/nostruct-align/1fh9A.t2k-w0.5.mod (nostruct-align/1fh9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fh9A/nostruct-align/1fh9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.223856
/projects/compbio/experiments/models.97/pdb/1f/1f3yA/nostruct-align/1f3yA.t2k-w0.5.mod(21):  Reading nostruct-align/1f3yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3yA/nostruct-align/1f3yA.t2k-w0.5.mod (nostruct-align/1f3yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3yA/nostruct-align/1f3yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.631903
/projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-w0.5.mod(22):  Reading nostruct-align/1ccwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8596/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-w0.5.mod (nostruct-align/1ccwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.903910
/projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t2k-w0.5.mod(21):  Reading nostruct-align/1at3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-23842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t2k-w0.5.mod (nostruct-align/1at3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.011902
/projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-w0.5.mod(22):  Reading nostruct-align/1ccwB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4221/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-w0.5.mod (nostruct-align/1ccwB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.144854
/projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t2k-w0.5.mod(21):  Reading nostruct-align/1oatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17989/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t2k-w0.5.mod (nostruct-align/1oatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.621874
/projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t2k-w0.5.mod(21):  Reading nostruct-align/1rlaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-4721/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t2k-w0.5.mod (nostruct-align/1rlaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.866890
/projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-w0.5.mod(22):  Reading nostruct-align/1eyhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21629/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-w0.5.mod (nostruct-align/1eyhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eyhA/nostruct-align/1eyhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.971869
/projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t2k-w0.5.mod(21):  Reading nostruct-align/1dgfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-1357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t2k-w0.5.mod (nostruct-align/1dgfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.774864
/projects/compbio/experiments/models.97/pdb/1u/1udb/nostruct-align/1udb.t2k-w0.5.mod(21):  Reading nostruct-align/1udb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-16664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udb/nostruct-align/1udb.t2k-w0.5.mod (nostruct-align/1udb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1udb/nostruct-align/1udb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.732887
/projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t2k-w0.5.mod(21):  Reading nostruct-align/1udc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t2k-w0.5.mod (nostruct-align/1udc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.659855
/projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-w0.5.mod(22):  Reading nostruct-align/1i12A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19076/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-w0.5.mod (nostruct-align/1i12A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i12A/nostruct-align/1i12A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.624901
/projects/compbio/experiments/models.97/pdb/1f/1fa0A/nostruct-align/1fa0A.t2k-w0.5.mod(21):  Reading nostruct-align/1fa0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-3047/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fa0A/nostruct-align/1fa0A.t2k-w0.5.mod (nostruct-align/1fa0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fa0A/nostruct-align/1fa0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.670872
/projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t2k-w0.5.mod(21):  Reading nostruct-align/1udg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9435/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t2k-w0.5.mod (nostruct-align/1udg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.332893
/projects/compbio/experiments/models.97/pdb/1f/1fa0B/nostruct-align/1fa0B.t2k-w0.5.mod(21):  Reading nostruct-align/1fa0B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-4365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fa0B/nostruct-align/1fa0B.t2k-w0.5.mod (nostruct-align/1fa0B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fa0B/nostruct-align/1fa0B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.701880
/projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t2k-w0.5.mod(21):  Reading nostruct-align/1udh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16161/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t2k-w0.5.mod (nostruct-align/1udh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.325880
/projects/compbio/experiments/models.97/pdb/1h/1ho8A/nostruct-align/1ho8A.t2k-w0.5.mod(21):  Reading nostruct-align/1ho8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26032/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ho8A/nostruct-align/1ho8A.t2k-w0.5.mod (nostruct-align/1ho8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1ho8A/nostruct-align/1ho8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.261904
/projects/compbio/experiments/models.97/pdb/1e/1el4A/nostruct-align/1el4A.t2k-w0.5.mod(21):  Reading nostruct-align/1el4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12134/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el4A/nostruct-align/1el4A.t2k-w0.5.mod (nostruct-align/1el4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1el4A/nostruct-align/1el4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.489902
/projects/compbio/experiments/models.97/pdb/1e/1e7tA/nostruct-align/1e7tA.t2k-w0.5.mod(21):  Reading nostruct-align/1e7tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-5522/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7tA/nostruct-align/1e7tA.t2k-w0.5.mod (nostruct-align/1e7tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e7tA/nostruct-align/1e7tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.231871
/projects/compbio/experiments/models.97/pdb/1k/1kxgA/nostruct-align/1kxgA.t2k-w0.5.mod(22):  Reading nostruct-align/1kxgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxgA/nostruct-align/1kxgA.t2k-w0.5.mod (nostruct-align/1kxgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kxgA/nostruct-align/1kxgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.358873
/projects/compbio/experiments/models.97/pdb/1q/1qhsA/nostruct-align/1qhsA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30537/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhsA/nostruct-align/1qhsA.t2k-w0.5.mod (nostruct-align/1qhsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhsA/nostruct-align/1qhsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.639879
/projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t2k-w0.5.mod(21):  Reading nostruct-align/1frb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27273/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t2k-w0.5.mod (nostruct-align/1frb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.649858
/projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t2k-w0.5.mod(21):  Reading nostruct-align/1duzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31010/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t2k-w0.5.mod (nostruct-align/1duzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.613869
/projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t2k-w0.5.mod(21):  Reading nostruct-align/1hucA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-1543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t2k-w0.5.mod (nostruct-align/1hucA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.970909
/projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t2k-w0.5.mod(21):  Reading nostruct-align/1duzB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-32279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t2k-w0.5.mod (nostruct-align/1duzB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.508854
/projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t2k-w0.5.mod(21):  Reading nostruct-align/1frd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t2k-w0.5.mod (nostruct-align/1frd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.134911
/projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t2k-w0.5.mod(22):  Reading nostruct-align/1c24A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15930/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t2k-w0.5.mod (nostruct-align/1c24A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.192905
/projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t2k-w0.5.mod(21):  Reading nostruct-align/1fre.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16440/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t2k-w0.5.mod (nostruct-align/1fre.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.253881
/projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k-w0.5.mod(22):  Reading nostruct-align/2cpgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k-w0.5.mod (nostruct-align/2cpgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.977901
/projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ckaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21930/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t2k-w0.5.mod (nostruct-align/1ckaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.484888
/projects/compbio/experiments/models.97/pdb/1f/1fuoA/nostruct-align/1fuoA.t2k-w0.5.mod(22):  Reading nostruct-align/1fuoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-8582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fuoA/nostruct-align/1fuoA.t2k-w0.5.mod (nostruct-align/1fuoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fuoA/nostruct-align/1fuoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.299868
/projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t2k-w0.5.mod(21):  Reading nostruct-align/1pedA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-15896/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t2k-w0.5.mod (nostruct-align/1pedA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.950886
/projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t2k-w0.5.mod(22):  Reading nostruct-align/1ecmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t2k-w0.5.mod (nostruct-align/1ecmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.225904
/projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-w0.5.mod(22):  Reading nostruct-align/1el5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-w0.5.mod (nostruct-align/1el5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1el5A/nostruct-align/1el5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.996870
/projects/compbio/experiments/models.97/pdb/1e/1e7uA/nostruct-align/1e7uA.t2k-w0.5.mod(22):  Reading nostruct-align/1e7uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-10757/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7uA/nostruct-align/1e7uA.t2k-w0.5.mod (nostruct-align/1e7uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e7uA/nostruct-align/1e7uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.553886
/projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t2k-w0.5.mod(21):  Reading nostruct-align/1qj2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26035/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t2k-w0.5.mod (nostruct-align/1qj2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.217882
/projects/compbio/experiments/models.97/pdb/1q/1qhtA/nostruct-align/1qhtA.t2k-w0.5.mod(22):  Reading nostruct-align/1qhtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhtA/nostruct-align/1qhtA.t2k-w0.5.mod (nostruct-align/1qhtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhtA/nostruct-align/1qhtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.272888
/projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t2k-w0.5.mod(21):  Reading nostruct-align/4xis.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32401/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t2k-w0.5.mod (nostruct-align/4xis.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.547890
/projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t2k-w0.5.mod(22):  Reading nostruct-align/1qj2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32491/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t2k-w0.5.mod (nostruct-align/1qj2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.499884
/projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t2k-w0.5.mod(21):  Reading nostruct-align/1fsb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11605/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t2k-w0.5.mod (nostruct-align/1fsb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.803911
/projects/compbio/experiments/models.97/pdb/1d/1dw9A/nostruct-align/1dw9A.t2k-w0.5.mod(22):  Reading nostruct-align/1dw9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16619/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dw9A/nostruct-align/1dw9A.t2k-w0.5.mod (nostruct-align/1dw9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dw9A/nostruct-align/1dw9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.548882
/projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t2k-w0.5.mod(22):  Reading nostruct-align/1qj2C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13827/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t2k-w0.5.mod (nostruct-align/1qj2C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.847858
/projects/compbio/experiments/models.97/pdb/1f/1fsd/nostruct-align/1fsd.t2k-w0.5.mod(21):  Reading nostruct-align/1fsd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsd/nostruct-align/1fsd.t2k-w0.5.mod (nostruct-align/1fsd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsd/nostruct-align/1fsd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.014883
/projects/compbio/experiments/models.97/pdb/1k/1kblA/nostruct-align/1kblA.t2k-w0.5.mod(22):  Reading nostruct-align/1kblA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kblA/nostruct-align/1kblA.t2k-w0.5.mod (nostruct-align/1kblA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kblA/nostruct-align/1kblA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.236858
/projects/compbio/experiments/models.97/pdb/1g/1g7jA/nostruct-align/1g7jA.t2k-w0.5.mod(21):  Reading nostruct-align/1g7jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-27544/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7jA/nostruct-align/1g7jA.t2k-w0.5.mod (nostruct-align/1g7jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7jA/nostruct-align/1g7jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.953856
/projects/compbio/experiments/models.97/pdb/1g/1g7jB/nostruct-align/1g7jB.t2k-w0.5.mod(21):  Reading nostruct-align/1g7jB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8651/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7jB/nostruct-align/1g7jB.t2k-w0.5.mod (nostruct-align/1g7jB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7jB/nostruct-align/1g7jB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.641878
/projects/compbio/experiments/models.97/pdb/2o/2oneA/nostruct-align/2oneA.t2k-w0.5.mod(21):  Reading nostruct-align/2oneA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31463/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2oneA/nostruct-align/2oneA.t2k-w0.5.mod (nostruct-align/2oneA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2oneA/nostruct-align/2oneA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.501892
/projects/compbio/experiments/models.97/pdb/1h/1hh0A/nostruct-align/1hh0A.t2k-w0.5.mod(21):  Reading nostruct-align/1hh0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-26570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh0A/nostruct-align/1hh0A.t2k-w0.5.mod (nostruct-align/1hh0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hh0A/nostruct-align/1hh0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.340853
/projects/compbio/experiments/models.97/pdb/1d/1d4fA/nostruct-align/1d4fA.t2k-w0.5.mod(22):  Reading nostruct-align/1d4fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1465/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4fA/nostruct-align/1d4fA.t2k-w0.5.mod (nostruct-align/1d4fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4fA/nostruct-align/1d4fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.778856
/projects/compbio/experiments/models.97/pdb/1f/1fsu/nostruct-align/1fsu.t2k-w0.5.mod(21):  Reading nostruct-align/1fsu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-32080/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsu/nostruct-align/1fsu.t2k-w0.5.mod (nostruct-align/1fsu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsu/nostruct-align/1fsu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.263870
/projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t2k-w0.5.mod(21):  Reading nostruct-align/1ntcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23763/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t2k-w0.5.mod (nostruct-align/1ntcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.676901
/projects/compbio/experiments/models.97/pdb/1e/1e0lA/nostruct-align/1e0lA.t2k-w0.5.mod(21):  Reading nostruct-align/1e0lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-1514/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0lA/nostruct-align/1e0lA.t2k-w0.5.mod (nostruct-align/1e0lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e0lA/nostruct-align/1e0lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.141907
/projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k-w0.5.mod(22):  Reading nostruct-align/1gqvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5078/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k-w0.5.mod (nostruct-align/1gqvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gqvA/nostruct-align/1gqvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.106886
/projects/compbio/experiments/models.97/pdb/1d/1dp0A/nostruct-align/1dp0A.t2k-w0.5.mod(21):  Reading nostruct-align/1dp0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-9380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp0A/nostruct-align/1dp0A.t2k-w0.5.mod (nostruct-align/1dp0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dp0A/nostruct-align/1dp0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.999910
/projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t2k-w0.5.mod(22):  Reading nostruct-align/1fsz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t2k-w0.5.mod (nostruct-align/1fsz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.487906
/projects/compbio/experiments/models.97/pdb/2c/2cavA/nostruct-align/2cavA.t2k-w0.5.mod(21):  Reading nostruct-align/2cavA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-18696/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cavA/nostruct-align/2cavA.t2k-w0.5.mod (nostruct-align/2cavA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cavA/nostruct-align/2cavA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.858854
/projects/compbio/experiments/models.97/pdb/1e/1el6A/nostruct-align/1el6A.t2k-w0.5.mod(22):  Reading nostruct-align/1el6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-449/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el6A/nostruct-align/1el6A.t2k-w0.5.mod (nostruct-align/1el6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1el6A/nostruct-align/1el6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.992868
/projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t2k-w0.5.mod(21):  Reading nostruct-align/1el6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-29758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t2k-w0.5.mod (nostruct-align/1el6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.992868
/projects/compbio/experiments/models.97/pdb/1i/1ijaA/nostruct-align/1ijaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ijaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijaA/nostruct-align/1ijaA.t2k-w0.5.mod (nostruct-align/1ijaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijaA/nostruct-align/1ijaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.368879
/projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t2k-w0.5.mod(21):  Reading nostruct-align/1b4rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-6606/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t2k-w0.5.mod (nostruct-align/1b4rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.104910
/projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t2k-w0.5.mod(21):  Reading nostruct-align/1qhuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-14777/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t2k-w0.5.mod (nostruct-align/1qhuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.328884
/projects/compbio/experiments/models.97/pdb/1j/1jfgA/nostruct-align/1jfgA.t2k-w0.5.mod(22):  Reading nostruct-align/1jfgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfgA/nostruct-align/1jfgA.t2k-w0.5.mod (nostruct-align/1jfgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfgA/nostruct-align/1jfgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.988911
/projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t2k-w0.5.mod(21):  Reading nostruct-align/1yghA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-27208/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t2k-w0.5.mod (nostruct-align/1yghA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.435907
/projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t2k-w0.5.mod(21):  Reading nostruct-align/1hueA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-12652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t2k-w0.5.mod (nostruct-align/1hueA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.595860
/projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-w0.5.mod(22):  Reading nostruct-align/1cczA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-w0.5.mod (nostruct-align/1cczA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.085873
/projects/compbio/experiments/models.97/pdb/4b/4bp2/nostruct-align/4bp2.t2k-w0.5.mod(21):  Reading nostruct-align/4bp2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3478/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4b/4bp2/nostruct-align/4bp2.t2k-w0.5.mod (nostruct-align/4bp2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4b/4bp2/nostruct-align/4bp2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.994881
/projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t2k-w0.5.mod(22):  Reading nostruct-align/2btcI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21862/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t2k-w0.5.mod (nostruct-align/2btcI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.890902
/projects/compbio/experiments/models.97/pdb/1h/1hh1A/nostruct-align/1hh1A.t2k-w0.5.mod(21):  Reading nostruct-align/1hh1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh1A/nostruct-align/1hh1A.t2k-w0.5.mod (nostruct-align/1hh1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hh1A/nostruct-align/1hh1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.520910
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Reading nostruct-align/1fts.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod (nostruct-align/1fts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.694860
/projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t2k-w0.5.mod(21):  Reading nostruct-align/1adeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17871/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t2k-w0.5.mod (nostruct-align/1adeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.396860
/projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t2k-w0.5.mod(21):  Reading nostruct-align/3fib.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-18852/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t2k-w0.5.mod (nostruct-align/3fib.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.057865
/projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t2k-w0.5.mod(21):  Reading nostruct-align/1ftt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28012/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t2k-w0.5.mod (nostruct-align/1ftt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.759886
/projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-w0.5.mod(21):  Reading nostruct-align/1ibyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-w0.5.mod (nostruct-align/1ibyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ibyA/nostruct-align/1ibyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.664864
/projects/compbio/experiments/models.97/pdb/1g/1gqwA/nostruct-align/1gqwA.t2k-w0.5.mod(22):  Reading nostruct-align/1gqwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-28898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gqwA/nostruct-align/1gqwA.t2k-w0.5.mod (nostruct-align/1gqwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gqwA/nostruct-align/1gqwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.670883
/projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-w0.5.mod(22):  Reading nostruct-align/1e7wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27415/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-w0.5.mod (nostruct-align/1e7wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e7wA/nostruct-align/1e7wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.572851
/projects/compbio/experiments/models.97/pdb/1d/1dgiR/nostruct-align/1dgiR.t2k-w0.5.mod(21):  Reading nostruct-align/1dgiR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-26916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgiR/nostruct-align/1dgiR.t2k-w0.5.mod (nostruct-align/1dgiR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgiR/nostruct-align/1dgiR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.908876
/projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-w0.5.mod(22):  Reading nostruct-align/1qj4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8883/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-w0.5.mod (nostruct-align/1qj4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.502863
/projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t2k-w0.5.mod(22):  Reading nostruct-align/1qhvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4853/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t2k-w0.5.mod (nostruct-align/1qhvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.857903
/projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t2k-w0.5.mod(21):  Reading nostruct-align/1fua.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t2k-w0.5.mod (nostruct-align/1fua.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.956850
/projects/compbio/experiments/models.97/pdb/1h/1hufA/nostruct-align/1hufA.t2k-w0.5.mod(22):  Reading nostruct-align/1hufA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hufA/nostruct-align/1hufA.t2k-w0.5.mod (nostruct-align/1hufA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hufA/nostruct-align/1hufA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.012903
/projects/compbio/experiments/models.97/pdb/1c/1ce9A/nostruct-align/1ce9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ce9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24291/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce9A/nostruct-align/1ce9A.t2k-w0.5.mod (nostruct-align/1ce9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ce9A/nostruct-align/1ce9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.822863
/projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t2k-w0.5.mod(21):  Reading nostruct-align/1ce9C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-17219/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t2k-w0.5.mod (nostruct-align/1ce9C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.822863
/projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t2k-w0.5.mod(21):  Reading nostruct-align/1vdeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t2k-w0.5.mod (nostruct-align/1vdeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.424871
/projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t2k-w0.5.mod(21):  Reading nostruct-align/1pszA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32512/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t2k-w0.5.mod (nostruct-align/1pszA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.601891
/projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t2k-w0.5.mod(21):  Reading nostruct-align/1fnhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7937/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t2k-w0.5.mod (nostruct-align/1fnhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.977873
/projects/compbio/experiments/models.97/pdb/1j/1jmrA/nostruct-align/1jmrA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22326/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmrA/nostruct-align/1jmrA.t2k-w0.5.mod (nostruct-align/1jmrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmrA/nostruct-align/1jmrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.164865
/projects/compbio/experiments/models.97/pdb/1g/1gjnA/nostruct-align/1gjnA.t2k-w0.5.mod(22):  Reading nostruct-align/1gjnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25650/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gjnA/nostruct-align/1gjnA.t2k-w0.5.mod (nostruct-align/1gjnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gjnA/nostruct-align/1gjnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.100874
/projects/compbio/experiments/models.97/pdb/1c/1c8bA/nostruct-align/1c8bA.t2k-w0.5.mod(22):  Reading nostruct-align/1c8bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8bA/nostruct-align/1c8bA.t2k-w0.5.mod (nostruct-align/1c8bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8bA/nostruct-align/1c8bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.801903
/projects/compbio/experiments/models.97/pdb/1e/1eylA/nostruct-align/1eylA.t2k-w0.5.mod(21):  Reading nostruct-align/1eylA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eylA/nostruct-align/1eylA.t2k-w0.5.mod (nostruct-align/1eylA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eylA/nostruct-align/1eylA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.537901
/projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t2k-w0.5.mod(21):  Reading nostruct-align/1shkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-15117/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t2k-w0.5.mod (nostruct-align/1shkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.902870
/projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t2k-w0.5.mod(21):  Reading nostruct-align/1fus.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26784/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t2k-w0.5.mod (nostruct-align/1fus.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.822891
/projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t2k-w0.5.mod(21):  Reading nostruct-align/1furA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-26470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t2k-w0.5.mod (nostruct-align/1furA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.846899
/projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t2k-w0.5.mod(21):  Reading nostruct-align/1ecpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-27718/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t2k-w0.5.mod (nostruct-align/1ecpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.173866
/projects/compbio/experiments/models.97/pdb/1i/1ibzA/nostruct-align/1ibzA.t2k-w0.5.mod(21):  Reading nostruct-align/1ibzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-27685/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ibzA/nostruct-align/1ibzA.t2k-w0.5.mod (nostruct-align/1ibzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ibzA/nostruct-align/1ibzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.625860
/projects/compbio/experiments/models.97/pdb/1q/1qamA/nostruct-align/1qamA.t2k-w0.5.mod(22):  Reading nostruct-align/1qamA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-24133/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qamA/nostruct-align/1qamA.t2k-w0.5.mod (nostruct-align/1qamA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qamA/nostruct-align/1qamA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.748852
/projects/compbio/experiments/models.97/pdb/1e/1e96B/nostruct-align/1e96B.t2k-w0.5.mod(21):  Reading nostruct-align/1e96B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e96B/nostruct-align/1e96B.t2k-w0.5.mod (nostruct-align/1e96B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e96B/nostruct-align/1e96B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.657883
/projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t2k-w0.5.mod(22):  Reading nostruct-align/1bgvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30951/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t2k-w0.5.mod (nostruct-align/1bgvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.079855
/projects/compbio/experiments/models.97/pdb/1h/1hh2P/nostruct-align/1hh2P.t2k-w0.5.mod(22):  Reading nostruct-align/1hh2P.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh2P/nostruct-align/1hh2P.t2k-w0.5.mod (nostruct-align/1hh2P.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hh2P/nostruct-align/1hh2P.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.984892
/projects/compbio/experiments/models.97/pdb/1q/1qj5A/nostruct-align/1qj5A.t2k-w0.5.mod(22):  Reading nostruct-align/1qj5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj5A/nostruct-align/1qj5A.t2k-w0.5.mod (nostruct-align/1qj5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qj5A/nostruct-align/1qj5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.448895
/projects/compbio/experiments/models.97/pdb/1j/1jfiA/nostruct-align/1jfiA.t2k-w0.5.mod(22):  Reading nostruct-align/1jfiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7983/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfiA/nostruct-align/1jfiA.t2k-w0.5.mod (nostruct-align/1jfiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfiA/nostruct-align/1jfiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.323854
/projects/compbio/experiments/models.97/pdb/1j/1jfiB/nostruct-align/1jfiB.t2k-w0.5.mod(21):  Reading nostruct-align/1jfiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21999/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfiB/nostruct-align/1jfiB.t2k-w0.5.mod (nostruct-align/1jfiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfiB/nostruct-align/1jfiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.067879
/projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t2k-w0.5.mod(22):  Reading nostruct-align/1c28A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-19904/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t2k-w0.5.mod (nostruct-align/1c28A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.415857
/projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t2k-w0.5.mod(21):  Reading nostruct-align/1gceA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25866/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t2k-w0.5.mod (nostruct-align/1gceA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.151865
/projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t2k-w0.5.mod(22):  Reading nostruct-align/1vdfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25974/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t2k-w0.5.mod (nostruct-align/1vdfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.135893
/projects/compbio/experiments/models.97/pdb/1g/1g0cA/nostruct-align/1g0cA.t2k-w0.5.mod(21):  Reading nostruct-align/1g0cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-4408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0cA/nostruct-align/1g0cA.t2k-w0.5.mod (nostruct-align/1g0cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0cA/nostruct-align/1g0cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.837868
/projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t2k-w0.5.mod(21):  Reading nostruct-align/1arzC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-32099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t2k-w0.5.mod (nostruct-align/1arzC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.179907
/projects/compbio/experiments/models.97/pdb/1j/1jmsA/nostruct-align/1jmsA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-23110/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmsA/nostruct-align/1jmsA.t2k-w0.5.mod (nostruct-align/1jmsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmsA/nostruct-align/1jmsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.563862
/projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t2k-w0.5.mod(21):  Reading nostruct-align/2pcdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30636/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t2k-w0.5.mod (nostruct-align/2pcdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.718906
/projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t2k-w0.5.mod(21):  Reading nostruct-align/1fvl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-15951/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t2k-w0.5.mod (nostruct-align/1fvl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.276896
/projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t2k-w0.5.mod(22):  Reading nostruct-align/1ckeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t2k-w0.5.mod (nostruct-align/1ckeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.495897
/projects/compbio/experiments/models.97/pdb/1c/1c8cA/nostruct-align/1c8cA.t2k-w0.5.mod(22):  Reading nostruct-align/1c8cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-5302/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8cA/nostruct-align/1c8cA.t2k-w0.5.mod (nostruct-align/1c8cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8cA/nostruct-align/1c8cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.615852
/projects/compbio/experiments/models.97/pdb/1k/1kiyA/nostruct-align/1kiyA.t2k-w0.5.mod(22):  Reading nostruct-align/1kiyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12554/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kiyA/nostruct-align/1kiyA.t2k-w0.5.mod (nostruct-align/1kiyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kiyA/nostruct-align/1kiyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.991898
/projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t2k-w0.5.mod(21):  Reading nostruct-align/3mefA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t2k-w0.5.mod (nostruct-align/3mefA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.148901
/projects/compbio/experiments/models.97/pdb/1k/1k6wA/nostruct-align/1k6wA.t2k-w0.5.mod(22):  Reading nostruct-align/1k6wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-27014/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6wA/nostruct-align/1k6wA.t2k-w0.5.mod (nostruct-align/1k6wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k6wA/nostruct-align/1k6wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.507891
/projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-w0.5.mod(22):  Reading nostruct-align/1hfuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-w0.5.mod (nostruct-align/1hfuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfuA/nostruct-align/1hfuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.277884
/projects/compbio/experiments/models.97/pdb/1f/1fw1A/nostruct-align/1fw1A.t2k-w0.5.mod(22):  Reading nostruct-align/1fw1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21715/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fw1A/nostruct-align/1fw1A.t2k-w0.5.mod (nostruct-align/1fw1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fw1A/nostruct-align/1fw1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.499855
/projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t2k-w0.5.mod(21):  Reading nostruct-align/2pcdM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-25082/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t2k-w0.5.mod (nostruct-align/2pcdM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.183851
/projects/compbio/experiments/models.97/pdb/1i/1i17A/nostruct-align/1i17A.t2k-w0.5.mod(21):  Reading nostruct-align/1i17A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i17A/nostruct-align/1i17A.t2k-w0.5.mod (nostruct-align/1i17A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i17A/nostruct-align/1i17A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.169903
/projects/compbio/experiments/models.97/pdb/1d/1dp3A/nostruct-align/1dp3A.t2k-w0.5.mod(21):  Reading nostruct-align/1dp3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24853/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp3A/nostruct-align/1dp3A.t2k-w0.5.mod (nostruct-align/1dp3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dp3A/nostruct-align/1dp3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.573889
/projects/compbio/experiments/models.97/pdb/2h/2hsdA/nostruct-align/2hsdA.t2k-w0.5.mod(21):  Reading nostruct-align/2hsdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30422/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hsdA/nostruct-align/2hsdA.t2k-w0.5.mod (nostruct-align/2hsdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hsdA/nostruct-align/2hsdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.980881
/projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t2k-w0.5.mod(21):  Reading nostruct-align/1dgkN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t2k-w0.5.mod (nostruct-align/1dgkN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.701872
/projects/compbio/experiments/models.97/pdb/1i/1ijdB/nostruct-align/1ijdB.t2k-w0.5.mod(21):  Reading nostruct-align/1ijdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-5266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijdB/nostruct-align/1ijdB.t2k-w0.5.mod (nostruct-align/1ijdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijdB/nostruct-align/1ijdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.077894
/projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t2k-w0.5.mod(22):  Reading nostruct-align/1bi5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5937/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t2k-w0.5.mod (nostruct-align/1bi5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.737881
/projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t2k-w0.5.mod(22):  Reading nostruct-align/1b63A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10225/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t2k-w0.5.mod (nostruct-align/1b63A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.665859
/projects/compbio/experiments/models.97/pdb/1q/1qhxA/nostruct-align/1qhxA.t2k-w0.5.mod(22):  Reading nostruct-align/1qhxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qhxA/nostruct-align/1qhxA.t2k-w0.5.mod (nostruct-align/1qhxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qhxA/nostruct-align/1qhxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.639879
/projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t2k-w0.5.mod(21):  Reading nostruct-align/1zymA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-12260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t2k-w0.5.mod (nostruct-align/1zymA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.371872
/projects/compbio/experiments/models.97/pdb/1k/1kbpA/nostruct-align/1kbpA.t2k-w0.5.mod(22):  Reading nostruct-align/1kbpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1665/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbpA/nostruct-align/1kbpA.t2k-w0.5.mod (nostruct-align/1kbpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kbpA/nostruct-align/1kbpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.970881
/projects/compbio/experiments/models.97/pdb/1g/1g0dA/nostruct-align/1g0dA.t2k-w0.5.mod(22):  Reading nostruct-align/1g0dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0dA/nostruct-align/1g0dA.t2k-w0.5.mod (nostruct-align/1g0dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0dA/nostruct-align/1g0dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.013887
/projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t2k-w0.5.mod(21):  Reading nostruct-align/2btfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-3886/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t2k-w0.5.mod (nostruct-align/2btfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.589897
/projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t2k-w0.5.mod(22):  Reading nostruct-align/1sacA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26462/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t2k-w0.5.mod (nostruct-align/1sacA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.397854
/projects/compbio/experiments/models.97/pdb/1q/1qpaA/nostruct-align/1qpaA.t2k-w0.5.mod(22):  Reading nostruct-align/1qpaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpaA/nostruct-align/1qpaA.t2k-w0.5.mod (nostruct-align/1qpaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpaA/nostruct-align/1qpaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.919861
/projects/compbio/experiments/models.97/pdb/1j/1jmtA/nostruct-align/1jmtA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmtA/nostruct-align/1jmtA.t2k-w0.5.mod (nostruct-align/1jmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmtA/nostruct-align/1jmtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.867884
/projects/compbio/experiments/models.97/pdb/1j/1jmtB/nostruct-align/1jmtB.t2k-w0.5.mod(22):  Reading nostruct-align/1jmtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmtB/nostruct-align/1jmtB.t2k-w0.5.mod (nostruct-align/1jmtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmtB/nostruct-align/1jmtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.299870
/projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t2k-w0.5.mod(22):  Reading nostruct-align/153l.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t2k-w0.5.mod (nostruct-align/153l.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.622906
/projects/compbio/experiments/models.97/pdb/1k/1k6xA/nostruct-align/1k6xA.t2k-w0.5.mod(22):  Reading nostruct-align/1k6xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-23222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6xA/nostruct-align/1k6xA.t2k-w0.5.mod (nostruct-align/1k6xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k6xA/nostruct-align/1k6xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.504889
/projects/compbio/experiments/models.97/pdb/1i/1ixxA/nostruct-align/1ixxA.t2k-w0.5.mod(21):  Reading nostruct-align/1ixxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixxA/nostruct-align/1ixxA.t2k-w0.5.mod (nostruct-align/1ixxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ixxA/nostruct-align/1ixxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.705891
/projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t2k-w0.5.mod(21):  Reading nostruct-align/1ixxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6692/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t2k-w0.5.mod (nostruct-align/1ixxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.072870
/projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t2k-w0.5.mod(22):  Reading nostruct-align/1ecrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t2k-w0.5.mod (nostruct-align/1ecrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.262896
/projects/compbio/experiments/models.97/pdb/1i/1i18A/nostruct-align/1i18A.t2k-w0.5.mod(21):  Reading nostruct-align/1i18A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-17747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i18A/nostruct-align/1i18A.t2k-w0.5.mod (nostruct-align/1i18A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i18A/nostruct-align/1i18A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.704868
/projects/compbio/experiments/models.97/pdb/1d/1dp4A/nostruct-align/1dp4A.t2k-w0.5.mod(22):  Reading nostruct-align/1dp4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20376/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp4A/nostruct-align/1dp4A.t2k-w0.5.mod (nostruct-align/1dp4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dp4A/nostruct-align/1dp4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.180899
/projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t2k-w0.5.mod(21):  Reading nostruct-align/3eugA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-26341/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t2k-w0.5.mod (nostruct-align/3eugA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.313894
/projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t2k-w0.5.mod(22):  Reading nostruct-align/1b4vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t2k-w0.5.mod (nostruct-align/1b4vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.000904
/projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t2k-w0.5.mod(21):  Reading nostruct-align/1fxd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9682/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t2k-w0.5.mod (nostruct-align/1fxd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.523876
/projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t2k-w0.5.mod(22):  Reading nostruct-align/1ltsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14346/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t2k-w0.5.mod (nostruct-align/1ltsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.505896
/projects/compbio/experiments/models.97/pdb/1k/1kbqA/nostruct-align/1kbqA.t2k-w0.5.mod(22):  Reading nostruct-align/1kbqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-24753/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbqA/nostruct-align/1kbqA.t2k-w0.5.mod (nostruct-align/1kbqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kbqA/nostruct-align/1kbqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.596895
/projects/compbio/experiments/models.97/pdb/2k/2ki5A/nostruct-align/2ki5A.t2k-w0.5.mod(21):  Reading nostruct-align/2ki5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-27693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2k/2ki5A/nostruct-align/2ki5A.t2k-w0.5.mod (nostruct-align/2ki5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2k/2ki5A/nostruct-align/2ki5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.217888
/projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t2k-w0.5.mod(21):  Reading nostruct-align/1bi6H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t2k-w0.5.mod (nostruct-align/1bi6H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.580873
/projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t2k-w0.5.mod(22):  Reading nostruct-align/1ltsC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31177/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t2k-w0.5.mod (nostruct-align/1ltsC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.016882
/projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t2k-w0.5.mod(21):  Reading nostruct-align/1ltsD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-1925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t2k-w0.5.mod (nostruct-align/1ltsD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.175863
/projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t2k-w0.5.mod(21):  Reading nostruct-align/1mpyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28291/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t2k-w0.5.mod (nostruct-align/1mpyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.425892
/projects/compbio/experiments/models.97/pdb/1q/1qpbA/nostruct-align/1qpbA.t2k-w0.5.mod(21):  Reading nostruct-align/1qpbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpbA/nostruct-align/1qpbA.t2k-w0.5.mod (nostruct-align/1qpbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpbA/nostruct-align/1qpbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.867903
/projects/compbio/experiments/models.97/pdb/1j/1jmuA/nostruct-align/1jmuA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmuA/nostruct-align/1jmuA.t2k-w0.5.mod (nostruct-align/1jmuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmuA/nostruct-align/1jmuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.234909
/projects/compbio/experiments/models.97/pdb/1j/1jmuB/nostruct-align/1jmuB.t2k-w0.5.mod(22):  Reading nostruct-align/1jmuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-1728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmuB/nostruct-align/1jmuB.t2k-w0.5.mod (nostruct-align/1jmuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmuB/nostruct-align/1jmuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.379890
/projects/compbio/experiments/models.97/pdb/1a/1azeA/nostruct-align/1azeA.t2k-w0.5.mod(21):  Reading nostruct-align/1azeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-13584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azeA/nostruct-align/1azeA.t2k-w0.5.mod (nostruct-align/1azeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azeA/nostruct-align/1azeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.523865
/projects/compbio/experiments/models.97/pdb/1g/1g7oA/nostruct-align/1g7oA.t2k-w0.5.mod(21):  Reading nostruct-align/1g7oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-2725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7oA/nostruct-align/1g7oA.t2k-w0.5.mod (nostruct-align/1g7oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7oA/nostruct-align/1g7oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.434851
/projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t2k-w0.5.mod(21):  Reading nostruct-align/1xyzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-18073/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t2k-w0.5.mod (nostruct-align/1xyzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.615902
/projects/compbio/experiments/models.97/pdb/1h/1hh5A/nostruct-align/1hh5A.t2k-w0.5.mod(21):  Reading nostruct-align/1hh5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25312/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh5A/nostruct-align/1hh5A.t2k-w0.5.mod (nostruct-align/1hh5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hh5A/nostruct-align/1hh5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.835878
/projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-w0.5.mod(22):  Reading nostruct-align/1ecsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-w0.5.mod (nostruct-align/1ecsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecsA/nostruct-align/1ecsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.925863
/projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t2k-w0.5.mod(21):  Reading nostruct-align/1tdtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t2k-w0.5.mod (nostruct-align/1tdtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.991909
/projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-w0.5.mod(22):  Reading nostruct-align/1i19A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13383/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-w0.5.mod (nostruct-align/1i19A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i19A/nostruct-align/1i19A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.636854
/projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t2k-w0.5.mod(21):  Reading nostruct-align/1qapA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30656/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t2k-w0.5.mod (nostruct-align/1qapA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.574858
/projects/compbio/experiments/models.97/pdb/1d/1dp5B/nostruct-align/1dp5B.t2k-w0.5.mod(21):  Reading nostruct-align/1dp5B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-28726/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp5B/nostruct-align/1dp5B.t2k-w0.5.mod (nostruct-align/1dp5B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dp5B/nostruct-align/1dp5B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.944878
/projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t2k-w0.5.mod(21):  Reading nostruct-align/1soxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-18790/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t2k-w0.5.mod (nostruct-align/1soxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.042881
/projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-w0.5.mod(22):  Reading nostruct-align/1nar.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14116/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-w0.5.mod (nostruct-align/1nar.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.769890
/projects/compbio/experiments/models.97/pdb/1i/1i7dA/nostruct-align/1i7dA.t2k-w0.5.mod(21):  Reading nostruct-align/1i7dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-27860/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7dA/nostruct-align/1i7dA.t2k-w0.5.mod (nostruct-align/1i7dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7dA/nostruct-align/1i7dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.821896
/projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t2k-w0.5.mod(22):  Reading nostruct-align/1b65A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31696/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t2k-w0.5.mod (nostruct-align/1b65A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.860893
/projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t2k-w0.5.mod(22):  Reading nostruct-align/1qj8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8844/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t2k-w0.5.mod (nostruct-align/1qj8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.884886
/projects/compbio/experiments/models.97/pdb/1n/1nc8/nostruct-align/1nc8.t2k-w0.5.mod(21):  Reading nostruct-align/1nc8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-6236/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nc8/nostruct-align/1nc8.t2k-w0.5.mod (nostruct-align/1nc8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nc8/nostruct-align/1nc8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.042858
/projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t2k-w0.5.mod(21):  Reading nostruct-align/1fyc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-28590/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t2k-w0.5.mod (nostruct-align/1fyc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.344889
/projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t2k-w0.5.mod(21):  Reading nostruct-align/1bgyE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t2k-w0.5.mod (nostruct-align/1bgyE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.212858
/projects/compbio/experiments/models.97/pdb/15/155c/nostruct-align/155c.t2k-w0.5.mod(21):  Reading nostruct-align/155c.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-3551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/15/155c/nostruct-align/155c.t2k-w0.5.mod (nostruct-align/155c.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/15/155c/nostruct-align/155c.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.202860
/projects/compbio/experiments/models.97/pdb/1i/1iqpA/nostruct-align/1iqpA.t2k-w0.5.mod(21):  Reading nostruct-align/1iqpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-16649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqpA/nostruct-align/1iqpA.t2k-w0.5.mod (nostruct-align/1iqpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iqpA/nostruct-align/1iqpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.620865
/projects/compbio/experiments/models.97/pdb/1m/1mr8A/nostruct-align/1mr8A.t2k-w0.5.mod(21):  Reading nostruct-align/1mr8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25761/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mr8A/nostruct-align/1mr8A.t2k-w0.5.mod (nostruct-align/1mr8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mr8A/nostruct-align/1mr8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.594870
/projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k-w0.5.mod(22):  Reading nostruct-align/1qpcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-21826/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k-w0.5.mod (nostruct-align/1qpcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpcA/nostruct-align/1qpcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.420856
/projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-w0.5.mod(21):  Reading nostruct-align/1fnlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28390/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-w0.5.mod (nostruct-align/1fnlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnlA/nostruct-align/1fnlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -34.634899
/projects/compbio/experiments/models.97/pdb/1j/1jmvA/nostruct-align/1jmvA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-18131/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmvA/nostruct-align/1jmvA.t2k-w0.5.mod (nostruct-align/1jmvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmvA/nostruct-align/1jmvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.857880
/projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t2k-w0.5.mod(21):  Reading nostruct-align/1ukz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-3886/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t2k-w0.5.mod (nostruct-align/1ukz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.996851
/projects/compbio/experiments/models.97/pdb/1e/1eypA/nostruct-align/1eypA.t2k-w0.5.mod(21):  Reading nostruct-align/1eypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6686/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eypA/nostruct-align/1eypA.t2k-w0.5.mod (nostruct-align/1eypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eypA/nostruct-align/1eypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.544878
/projects/compbio/experiments/models.97/pdb/1k/1k6zA/nostruct-align/1k6zA.t2k-w0.5.mod(22):  Reading nostruct-align/1k6zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k6zA/nostruct-align/1k6zA.t2k-w0.5.mod (nostruct-align/1k6zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k6zA/nostruct-align/1k6zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.094906
/projects/compbio/experiments/models.97/pdb/1d/1dgnA/nostruct-align/1dgnA.t2k-w0.5.mod(21):  Reading nostruct-align/1dgnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-691/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgnA/nostruct-align/1dgnA.t2k-w0.5.mod (nostruct-align/1dgnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgnA/nostruct-align/1dgnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.343878
/projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t2k-w0.5.mod(21):  Reading nostruct-align/1lfaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-21339/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t2k-w0.5.mod (nostruct-align/1lfaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.746878
/projects/compbio/experiments/models.97/pdb/1h/1h54A/nostruct-align/1h54A.t2k-w0.5.mod(22):  Reading nostruct-align/1h54A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-10202/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h54A/nostruct-align/1h54A.t2k-w0.5.mod (nostruct-align/1h54A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h54A/nostruct-align/1h54A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.636904
/projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t2k-w0.5.mod(21):  Reading nostruct-align/1adjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-24533/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t2k-w0.5.mod (nostruct-align/1adjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.737858
/projects/compbio/experiments/models.97/pdb/1h/1h54B/nostruct-align/1h54B.t2k-w0.5.mod(21):  Reading nostruct-align/1h54B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-10884/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h54B/nostruct-align/1h54B.t2k-w0.5.mod (nostruct-align/1h54B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h54B/nostruct-align/1h54B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.204903
/projects/compbio/experiments/models.97/pdb/1e/1ee2A/nostruct-align/1ee2A.t2k-w0.5.mod(21):  Reading nostruct-align/1ee2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1373/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee2A/nostruct-align/1ee2A.t2k-w0.5.mod (nostruct-align/1ee2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ee2A/nostruct-align/1ee2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.308874
/projects/compbio/experiments/models.97/pdb/1e/1e20A/nostruct-align/1e20A.t2k-w0.5.mod(22):  Reading nostruct-align/1e20A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24884/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e20A/nostruct-align/1e20A.t2k-w0.5.mod (nostruct-align/1e20A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e20A/nostruct-align/1e20A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.540897
/projects/compbio/experiments/models.97/pdb/1f/1fa8A/nostruct-align/1fa8A.t2k-w0.5.mod(21):  Reading nostruct-align/1fa8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25425/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fa8A/nostruct-align/1fa8A.t2k-w0.5.mod (nostruct-align/1fa8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fa8A/nostruct-align/1fa8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.980858
/projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t2k-w0.5.mod(22):  Reading nostruct-align/1a8rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1696/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t2k-w0.5.mod (nostruct-align/1a8rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.821873
/projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t2k-w0.5.mod(22):  Reading nostruct-align/12asA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-29301/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t2k-w0.5.mod (nostruct-align/12asA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.023888
/projects/compbio/experiments/models.97/pdb/1i/1ijgA/nostruct-align/1ijgA.t2k-w0.5.mod(22):  Reading nostruct-align/1ijgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijgA/nostruct-align/1ijgA.t2k-w0.5.mod (nostruct-align/1ijgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijgA/nostruct-align/1ijgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.136889
/projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-w0.5.mod(22):  Reading nostruct-align/3sdhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-17948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-w0.5.mod (nostruct-align/3sdhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.314861
/projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t2k-w0.5.mod(21):  Reading nostruct-align/1ulo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t2k-w0.5.mod (nostruct-align/1ulo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.512857
/projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t2k-w0.5.mod(21):  Reading nostruct-align/1b66A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14906/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t2k-w0.5.mod (nostruct-align/1b66A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.381910
/projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t2k-w0.5.mod(21):  Reading nostruct-align/1ulp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-25016/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t2k-w0.5.mod (nostruct-align/1ulp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.512857
/projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k-w0.5.mod(22):  Reading nostruct-align/1iqqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11220/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k-w0.5.mod (nostruct-align/1iqqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iqqA/nostruct-align/1iqqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.021904
/projects/compbio/experiments/models.97/pdb/1c/1ckiA/nostruct-align/1ckiA.t2k-w0.5.mod(21):  Reading nostruct-align/1ckiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckiA/nostruct-align/1ckiA.t2k-w0.5.mod (nostruct-align/1ckiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckiA/nostruct-align/1ckiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.138859
/projects/compbio/experiments/models.97/pdb/1c/1c8gA/nostruct-align/1c8gA.t2k-w0.5.mod(22):  Reading nostruct-align/1c8gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8gA/nostruct-align/1c8gA.t2k-w0.5.mod (nostruct-align/1c8gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8gA/nostruct-align/1c8gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.630882
/projects/compbio/experiments/models.97/pdb/1e/1eyqA/nostruct-align/1eyqA.t2k-w0.5.mod(22):  Reading nostruct-align/1eyqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13090/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyqA/nostruct-align/1eyqA.t2k-w0.5.mod (nostruct-align/1eyqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eyqA/nostruct-align/1eyqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.566891
/projects/compbio/experiments/models.97/pdb/1n/1ncg/nostruct-align/1ncg.t2k-w0.5.mod(21):  Reading nostruct-align/1ncg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ncg/nostruct-align/1ncg.t2k-w0.5.mod (nostruct-align/1ncg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ncg/nostruct-align/1ncg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.612906
/projects/compbio/experiments/models.97/pdb/1h/1hh7A/nostruct-align/1hh7A.t2k-w0.5.mod(22):  Reading nostruct-align/1hh7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-16914/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh7A/nostruct-align/1hh7A.t2k-w0.5.mod (nostruct-align/1hh7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hh7A/nostruct-align/1hh7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.704906
/projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k-w0.5.mod(21):  Reading nostruct-align/1a1iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17076/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k-w0.5.mod (nostruct-align/1a1iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -37.503895
/projects/compbio/experiments/models.97/pdb/1g/1gl1I/nostruct-align/1gl1I.t2k-w0.5.mod(22):  Reading nostruct-align/1gl1I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl1I/nostruct-align/1gl1I.t2k-w0.5.mod (nostruct-align/1gl1I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gl1I/nostruct-align/1gl1I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.133852
/projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t2k-w0.5.mod(22):  Reading nostruct-align/1tf4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t2k-w0.5.mod (nostruct-align/1tf4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.323908
/projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-w0.5.mod(22):  Reading nostruct-align/1kqfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4542/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-w0.5.mod (nostruct-align/1kqfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kqfA/nostruct-align/1kqfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.691908
/projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k-w0.5.mod(22):  Reading nostruct-align/1kqfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k-w0.5.mod (nostruct-align/1kqfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kqfB/nostruct-align/1kqfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.870895
/projects/compbio/experiments/models.97/pdb/1d/1dnyA/nostruct-align/1dnyA.t2k-w0.5.mod(21):  Reading nostruct-align/1dnyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-25346/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dnyA/nostruct-align/1dnyA.t2k-w0.5.mod (nostruct-align/1dnyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dnyA/nostruct-align/1dnyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.035883
/projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-w0.5.mod(22):  Reading nostruct-align/1kqfC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-w0.5.mod (nostruct-align/1kqfC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kqfC/nostruct-align/1kqfC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.630905
/projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t2k-w0.5.mod(21):  Reading nostruct-align/1ncs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14777/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t2k-w0.5.mod (nostruct-align/1ncs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.777851
/projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t2k-w0.5.mod(21):  Reading nostruct-align/1nct.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-17333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t2k-w0.5.mod (nostruct-align/1nct.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.708857
/projects/compbio/experiments/models.97/pdb/1i/1ijhA/nostruct-align/1ijhA.t2k-w0.5.mod(22):  Reading nostruct-align/1ijhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijhA/nostruct-align/1ijhA.t2k-w0.5.mod (nostruct-align/1ijhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijhA/nostruct-align/1ijhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.899881
/projects/compbio/experiments/models.97/pdb/1i/1i7fA/nostruct-align/1i7fA.t2k-w0.5.mod(22):  Reading nostruct-align/1i7fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32401/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7fA/nostruct-align/1i7fA.t2k-w0.5.mod (nostruct-align/1i7fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7fA/nostruct-align/1i7fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.897907
/projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t2k-w0.5.mod(21):  Reading nostruct-align/1gyfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-5531/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t2k-w0.5.mod (nostruct-align/1gyfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.535908
/projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t2k-w0.5.mod(21):  Reading nostruct-align/1ncx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-7957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t2k-w0.5.mod (nostruct-align/1ncx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.346869
/projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-w0.5.mod(22):  Reading nostruct-align/1m6pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-w0.5.mod (nostruct-align/1m6pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.791880
/projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k-w0.5.mod(21):  Reading nostruct-align/1b67A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12200/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k-w0.5.mod (nostruct-align/1b67A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.451859
/projects/compbio/experiments/models.97/pdb/1d/1dvbA/nostruct-align/1dvbA.t2k-w0.5.mod(21):  Reading nostruct-align/1dvbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2433/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvbA/nostruct-align/1dvbA.t2k-w0.5.mod (nostruct-align/1dvbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvbA/nostruct-align/1dvbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.906900
/projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t2k-w0.5.mod(22):  Reading nostruct-align/1hulA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t2k-w0.5.mod (nostruct-align/1hulA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.970860
/projects/compbio/experiments/models.97/pdb/1g/1g0hA/nostruct-align/1g0hA.t2k-w0.5.mod(21):  Reading nostruct-align/1g0hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0hA/nostruct-align/1g0hA.t2k-w0.5.mod (nostruct-align/1g0hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0hA/nostruct-align/1g0hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.624876
/projects/compbio/experiments/models.97/pdb/1i/1iqrA/nostruct-align/1iqrA.t2k-w0.5.mod(22):  Reading nostruct-align/1iqrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqrA/nostruct-align/1iqrA.t2k-w0.5.mod (nostruct-align/1iqrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iqrA/nostruct-align/1iqrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.509863
/projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-w0.5.mod(22):  Reading nostruct-align/1dp7P.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23053/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-w0.5.mod (nostruct-align/1dp7P.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.829880
/projects/compbio/experiments/models.97/pdb/1f/1fnnA/nostruct-align/1fnnA.t2k-w0.5.mod(22):  Reading nostruct-align/1fnnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnnA/nostruct-align/1fnnA.t2k-w0.5.mod (nostruct-align/1fnnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnnA/nostruct-align/1fnnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.134871
/projects/compbio/experiments/models.97/pdb/1j/1jmxA/nostruct-align/1jmxA.t2k-w0.5.mod(22):  Reading nostruct-align/1jmxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmxA/nostruct-align/1jmxA.t2k-w0.5.mod (nostruct-align/1jmxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmxA/nostruct-align/1jmxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.269861
/projects/compbio/experiments/models.97/pdb/1j/1jmxB/nostruct-align/1jmxB.t2k-w0.5.mod(22):  Reading nostruct-align/1jmxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-15109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmxB/nostruct-align/1jmxB.t2k-w0.5.mod (nostruct-align/1jmxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmxB/nostruct-align/1jmxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.093904
/projects/compbio/experiments/models.97/pdb/1g/1gl2A/nostruct-align/1gl2A.t2k-w0.5.mod(22):  Reading nostruct-align/1gl2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15783/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2A/nostruct-align/1gl2A.t2k-w0.5.mod (nostruct-align/1gl2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gl2A/nostruct-align/1gl2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.927904
/projects/compbio/experiments/models.97/pdb/1g/1gl2B/nostruct-align/1gl2B.t2k-w0.5.mod(22):  Reading nostruct-align/1gl2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2B/nostruct-align/1gl2B.t2k-w0.5.mod (nostruct-align/1gl2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gl2B/nostruct-align/1gl2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.621906
/projects/compbio/experiments/models.97/pdb/1g/1gl2C/nostruct-align/1gl2C.t2k-w0.5.mod(22):  Reading nostruct-align/1gl2C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19205/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2C/nostruct-align/1gl2C.t2k-w0.5.mod (nostruct-align/1gl2C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gl2C/nostruct-align/1gl2C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.151867
/projects/compbio/experiments/models.97/pdb/1g/1g7rA/nostruct-align/1g7rA.t2k-w0.5.mod(22):  Reading nostruct-align/1g7rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-31259/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7rA/nostruct-align/1g7rA.t2k-w0.5.mod (nostruct-align/1g7rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7rA/nostruct-align/1g7rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.190910
/projects/compbio/experiments/models.97/pdb/1e/1eyrA/nostruct-align/1eyrA.t2k-w0.5.mod(22):  Reading nostruct-align/1eyrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyrA/nostruct-align/1eyrA.t2k-w0.5.mod (nostruct-align/1eyrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eyrA/nostruct-align/1eyrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.599855
/projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t2k-w0.5.mod(21):  Reading nostruct-align/1a17.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-20004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t2k-w0.5.mod (nostruct-align/1a17.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.636864
/projects/compbio/experiments/models.97/pdb/1g/1gl2D/nostruct-align/1gl2D.t2k-w0.5.mod(22):  Reading nostruct-align/1gl2D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8786/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl2D/nostruct-align/1gl2D.t2k-w0.5.mod (nostruct-align/1gl2D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gl2D/nostruct-align/1gl2D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.682890
/projects/compbio/experiments/models.97/pdb/1j/1jmxG/nostruct-align/1jmxG.t2k-w0.5.mod(22):  Reading nostruct-align/1jmxG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jmxG/nostruct-align/1jmxG.t2k-w0.5.mod (nostruct-align/1jmxG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jmxG/nostruct-align/1jmxG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.742893
/projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t2k-w0.5.mod(21):  Reading nostruct-align/1ndh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15118/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t2k-w0.5.mod (nostruct-align/1ndh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.856850
/projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-w0.5.mod(22):  Reading nostruct-align/1hh8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17806/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-w0.5.mod (nostruct-align/1hh8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hh8A/nostruct-align/1hh8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.446869
/projects/compbio/experiments/models.97/pdb/1f/1fuxA/nostruct-align/1fuxA.t2k-w0.5.mod(22):  Reading nostruct-align/1fuxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fuxA/nostruct-align/1fuxA.t2k-w0.5.mod (nostruct-align/1fuxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fuxA/nostruct-align/1fuxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.479891
/projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t2k-w0.5.mod(21):  Reading nostruct-align/1ndk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-32536/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t2k-w0.5.mod (nostruct-align/1ndk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.626909
/projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t2k-w0.5.mod(22):  Reading nostruct-align/1ee4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t2k-w0.5.mod (nostruct-align/1ee4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.826902
/projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-w0.5.mod(21):  Reading nostruct-align/1e0tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5147/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-w0.5.mod (nostruct-align/1e0tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e0tA/nostruct-align/1e0tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.520876
/projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t2k-w0.5.mod(21):  Reading nostruct-align/1une.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-10734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t2k-w0.5.mod (nostruct-align/1une.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.045855
/projects/compbio/experiments/models.97/pdb/1i/1i7gA/nostruct-align/1i7gA.t2k-w0.5.mod(22):  Reading nostruct-align/1i7gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19188/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7gA/nostruct-align/1i7gA.t2k-w0.5.mod (nostruct-align/1i7gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7gA/nostruct-align/1i7gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.711903
/projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t2k-w0.5.mod(22):  Reading nostruct-align/1a0i.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16074/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t2k-w0.5.mod (nostruct-align/1a0i.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.772886
/projects/compbio/experiments/models.97/pdb/1b/1b68A/nostruct-align/1b68A.t2k-w0.5.mod(21):  Reading nostruct-align/1b68A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29932/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b68A/nostruct-align/1b68A.t2k-w0.5.mod (nostruct-align/1b68A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b68A/nostruct-align/1b68A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.470879
/projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t2k-w0.5.mod(21):  Reading nostruct-align/1humA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t2k-w0.5.mod (nostruct-align/1humA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.385874
/projects/compbio/experiments/models.97/pdb/2c/2cab/nostruct-align/2cab.t2k-w0.5.mod(21):  Reading nostruct-align/2cab.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-2973/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cab/nostruct-align/2cab.t2k-w0.5.mod (nostruct-align/2cab.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cab/nostruct-align/2cab.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.138876
/projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t2k-w0.5.mod(21):  Reading nostruct-align/1eriA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t2k-w0.5.mod (nostruct-align/1eriA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.442894
/projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t2k-w0.5.mod(21):  Reading nostruct-align/1a0p.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t2k-w0.5.mod (nostruct-align/1a0p.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.194895
/projects/compbio/experiments/models.97/pdb/2c/2cae/nostruct-align/2cae.t2k-w0.5.mod(22):  Reading nostruct-align/2cae.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-31300/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cae/nostruct-align/2cae.t2k-w0.5.mod (nostruct-align/2cae.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cae/nostruct-align/2cae.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.168871
/projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t2k-w0.5.mod(21):  Reading nostruct-align/1boeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25537/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t2k-w0.5.mod (nostruct-align/1boeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.572865
/projects/compbio/experiments/models.97/pdb/1g/1gjuA/nostruct-align/1gjuA.t2k-w0.5.mod(21):  Reading nostruct-align/1gjuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-13699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gjuA/nostruct-align/1gjuA.t2k-w0.5.mod (nostruct-align/1gjuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gjuA/nostruct-align/1gjuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.124861
/projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t2k-w0.5.mod(21):  Reading nostruct-align/1a26.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-21808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t2k-w0.5.mod (nostruct-align/1a26.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.249855
/projects/compbio/experiments/models.97/pdb/1a/1a27/nostruct-align/1a27.t2k-w0.5.mod(22):  Reading nostruct-align/1a27.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-11921/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a27/nostruct-align/1a27.t2k-w0.5.mod (nostruct-align/1a27.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a27/nostruct-align/1a27.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.069904
/projects/compbio/experiments/models.97/pdb/1g/1g7sA/nostruct-align/1g7sA.t2k-w0.5.mod(21):  Reading nostruct-align/1g7sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-26028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7sA/nostruct-align/1g7sA.t2k-w0.5.mod (nostruct-align/1g7sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7sA/nostruct-align/1g7sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.691866
/projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-w0.5.mod(22):  Reading nostruct-align/1d4oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-w0.5.mod (nostruct-align/1d4oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.754871
/projects/compbio/experiments/models.97/pdb/1b/1bvoA/nostruct-align/1bvoA.t2k-w0.5.mod(22):  Reading nostruct-align/1bvoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvoA/nostruct-align/1bvoA.t2k-w0.5.mod (nostruct-align/1bvoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvoA/nostruct-align/1bvoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.029882
/projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-w0.5.mod(22):  Reading nostruct-align/7a3hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-w0.5.mod (nostruct-align/7a3hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.166864
/projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t2k-w0.5.mod(22):  Reading nostruct-align/1lfdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t2k-w0.5.mod (nostruct-align/1lfdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.713909
/projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-w0.5.mod(22):  Reading nostruct-align/1cruA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-w0.5.mod (nostruct-align/1cruA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.162884
/projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t2k-w0.5.mod(21):  Reading nostruct-align/1tf6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-30387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t2k-w0.5.mod (nostruct-align/1tf6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -50.396870
/projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t2k-w0.5.mod(21):  Reading nostruct-align/2cas.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-20437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t2k-w0.5.mod (nostruct-align/2cas.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.710911
/projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k-w0.5.mod(21):  Reading nostruct-align/1bb1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7153/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k-w0.5.mod (nostruct-align/1bb1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.804876
/projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k-w0.5.mod(22):  Reading nostruct-align/1bb1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30500/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k-w0.5.mod (nostruct-align/1bb1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bb1B/nostruct-align/1bb1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.831894
/projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t2k-w0.5.mod(21):  Reading nostruct-align/1qatB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-6614/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t2k-w0.5.mod (nostruct-align/1qatB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.674862
/projects/compbio/experiments/models.97/pdb/1b/1bb1C/nostruct-align/1bb1C.t2k-w0.5.mod(22):  Reading nostruct-align/1bb1C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18907/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb1C/nostruct-align/1bb1C.t2k-w0.5.mod (nostruct-align/1bb1C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bb1C/nostruct-align/1bb1C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.649910
/projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t2k-w0.5.mod(21):  Reading nostruct-align/1neq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t2k-w0.5.mod (nostruct-align/1neq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.641870
/projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t2k-w0.5.mod(21):  Reading nostruct-align/1ng1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6992/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t2k-w0.5.mod (nostruct-align/1ng1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.134890
/projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t2k-w0.5.mod(21):  Reading nostruct-align/1a1d.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16014/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t2k-w0.5.mod (nostruct-align/1a1d.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.672852
/projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t2k-w0.5.mod(21):  Reading nostruct-align/1uok.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12273/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t2k-w0.5.mod (nostruct-align/1uok.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.458891
/projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t2k-w0.5.mod(21):  Reading nostruct-align/1neu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25337/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t2k-w0.5.mod (nostruct-align/1neu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.329863
/projects/compbio/experiments/models.97/pdb/1i/1i7hA/nostruct-align/1i7hA.t2k-w0.5.mod(22):  Reading nostruct-align/1i7hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7hA/nostruct-align/1i7hA.t2k-w0.5.mod (nostruct-align/1i7hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7hA/nostruct-align/1i7hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.445883
/projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t2k-w0.5.mod(21):  Reading nostruct-align/1new.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t2k-w0.5.mod (nostruct-align/1new.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.835878
/projects/compbio/experiments/models.97/pdb/1k/1kxrA/nostruct-align/1kxrA.t2k-w0.5.mod(22):  Reading nostruct-align/1kxrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22220/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxrA/nostruct-align/1kxrA.t2k-w0.5.mod (nostruct-align/1kxrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kxrA/nostruct-align/1kxrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.825855
/projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t2k-w0.5.mod(21):  Reading nostruct-align/1bvp1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t2k-w0.5.mod (nostruct-align/1bvp1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.571894
/projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t2k-w0.5.mod(21):  Reading nostruct-align/2cba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t2k-w0.5.mod (nostruct-align/2cba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.484869
/projects/compbio/experiments/models.97/pdb/1k/1kbvA/nostruct-align/1kbvA.t2k-w0.5.mod(22):  Reading nostruct-align/1kbvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2909/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kbvA/nostruct-align/1kbvA.t2k-w0.5.mod (nostruct-align/1kbvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kbvA/nostruct-align/1kbvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.406858
/projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t2k-w0.5.mod(21):  Reading nostruct-align/1r2aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15598/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t2k-w0.5.mod (nostruct-align/1r2aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.856903
/projects/compbio/experiments/models.97/pdb/1e/1erjA/nostruct-align/1erjA.t2k-w0.5.mod(21):  Reading nostruct-align/1erjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-18818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erjA/nostruct-align/1erjA.t2k-w0.5.mod (nostruct-align/1erjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1erjA/nostruct-align/1erjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -36.091888
/projects/compbio/experiments/models.97/pdb/1i/1is2A/nostruct-align/1is2A.t2k-w0.5.mod(22):  Reading nostruct-align/1is2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1is2A/nostruct-align/1is2A.t2k-w0.5.mod (nostruct-align/1is2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1is2A/nostruct-align/1is2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.969866
/projects/compbio/experiments/models.97/pdb/2c/2cbf/nostruct-align/2cbf.t2k-w0.5.mod(22):  Reading nostruct-align/2cbf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15804/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cbf/nostruct-align/2cbf.t2k-w0.5.mod (nostruct-align/2cbf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cbf/nostruct-align/2cbf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.704876
/projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t2k-w0.5.mod(22):  Reading nostruct-align/1uox.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t2k-w0.5.mod (nostruct-align/1uox.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.394905
/projects/compbio/experiments/models.97/pdb/1a/1a1s/nostruct-align/1a1s.t2k-w0.5.mod(21):  Reading nostruct-align/1a1s.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-30754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1s/nostruct-align/1a1s.t2k-w0.5.mod (nostruct-align/1a1s.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a1s/nostruct-align/1a1s.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.438910
/projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t2k-w0.5.mod(21):  Reading nostruct-align/1nfa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8781/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t2k-w0.5.mod (nostruct-align/1nfa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.022877
/projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t2k-w0.5.mod(22):  Reading nostruct-align/1a32.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-3837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t2k-w0.5.mod (nostruct-align/1a32.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.727903
/projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-w0.5.mod(22):  Reading nostruct-align/1jo8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23273/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-w0.5.mod (nostruct-align/1jo8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jo8A/nostruct-align/1jo8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.558899
/projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t2k-w0.5.mod(21):  Reading nostruct-align/2cbh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16053/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t2k-w0.5.mod (nostruct-align/2cbh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.343876
/projects/compbio/experiments/models.97/pdb/1c/1cklA/nostruct-align/1cklA.t2k-w0.5.mod(21):  Reading nostruct-align/1cklA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-26427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cklA/nostruct-align/1cklA.t2k-w0.5.mod (nostruct-align/1cklA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cklA/nostruct-align/1cklA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.866888
/projects/compbio/experiments/models.97/pdb/1g/1gl4A/nostruct-align/1gl4A.t2k-w0.5.mod(22):  Reading nostruct-align/1gl4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2233/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl4A/nostruct-align/1gl4A.t2k-w0.5.mod (nostruct-align/1gl4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gl4A/nostruct-align/1gl4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.603853
/projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t2k-w0.5.mod(21):  Reading nostruct-align/1cklB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t2k-w0.5.mod (nostruct-align/1cklB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.488874
/projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t2k-w0.5.mod(21):  Reading nostruct-align/1a1w.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-27892/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t2k-w0.5.mod (nostruct-align/1a1w.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.297890
/projects/compbio/experiments/models.97/pdb/1g/1gl4B/nostruct-align/1gl4B.t2k-w0.5.mod(22):  Reading nostruct-align/1gl4B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gl4B/nostruct-align/1gl4B.t2k-w0.5.mod (nostruct-align/1gl4B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gl4B/nostruct-align/1gl4B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.373863
/projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t2k-w0.5.mod(22):  Reading nostruct-align/1a1x.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19620/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t2k-w0.5.mod (nostruct-align/1a1x.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.108910
/projects/compbio/experiments/models.97/pdb/1g/1g7tA/nostruct-align/1g7tA.t2k-w0.5.mod(21):  Reading nostruct-align/1g7tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-24866/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g7tA/nostruct-align/1g7tA.t2k-w0.5.mod (nostruct-align/1g7tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g7tA/nostruct-align/1g7tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.973904
/projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t2k-w0.5.mod(21):  Reading nostruct-align/1di0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-10713/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t2k-w0.5.mod (nostruct-align/1di0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.043907
/projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t2k-w0.5.mod(21):  Reading nostruct-align/1a1z.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-6057/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t2k-w0.5.mod (nostruct-align/1a1z.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.246866
/projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t2k-w0.5.mod(21):  Reading nostruct-align/1shsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14955/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t2k-w0.5.mod (nostruct-align/1shsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.283867
/projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t2k-w0.5.mod(21):  Reading nostruct-align/1dgrC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15364/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t2k-w0.5.mod (nostruct-align/1dgrC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.428852
/projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t2k-w0.5.mod(21):  Reading nostruct-align/2cbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-10717/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t2k-w0.5.mod (nostruct-align/2cbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.161896
/projects/compbio/experiments/models.97/pdb/1e/1ee6A/nostruct-align/1ee6A.t2k-w0.5.mod(22):  Reading nostruct-align/1ee6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15696/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee6A/nostruct-align/1ee6A.t2k-w0.5.mod (nostruct-align/1ee6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ee6A/nostruct-align/1ee6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.491879
/projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t2k-w0.5.mod(21):  Reading nostruct-align/1ecxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-18962/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t2k-w0.5.mod (nostruct-align/1ecxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.144903
/projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t2k-w0.5.mod(21):  Reading nostruct-align/1nfn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-670/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t2k-w0.5.mod (nostruct-align/1nfn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.238857
/projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-w0.5.mod(22):  Reading nostruct-align/1qauA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-w0.5.mod (nostruct-align/1qauA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.817902
/projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-w0.5.mod(21):  Reading nostruct-align/1nfp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-30302/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-w0.5.mod (nostruct-align/1nfp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.410904
/projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t2k-w0.5.mod(21):  Reading nostruct-align/1dgrM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13601/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t2k-w0.5.mod (nostruct-align/1dgrM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.140903
/projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t2k-w0.5.mod(21):  Reading nostruct-align/1dgrN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15629/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t2k-w0.5.mod (nostruct-align/1dgrN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.876873
/projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t2k-w0.5.mod(21):  Reading nostruct-align/1a8vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27316/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t2k-w0.5.mod (nostruct-align/1a8vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.789902
/projects/compbio/experiments/models.97/pdb/1f/1fggA/nostruct-align/1fggA.t2k-w0.5.mod(21):  Reading nostruct-align/1fggA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-21664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fggA/nostruct-align/1fggA.t2k-w0.5.mod (nostruct-align/1fggA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fggA/nostruct-align/1fggA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.470900
/projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t2k-w0.5.mod(22):  Reading nostruct-align/1cdcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10542/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t2k-w0.5.mod (nostruct-align/1cdcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.760899
/projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t2k-w0.5.mod(21):  Reading nostruct-align/1cdcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22363/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t2k-w0.5.mod (nostruct-align/1cdcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.055897
/projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t2k-w0.5.mod(21):  Reading nostruct-align/1gcmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-23758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t2k-w0.5.mod (nostruct-align/1gcmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.718864
/projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t2k-w0.5.mod(21):  Reading nostruct-align/1dgrV.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-3056/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t2k-w0.5.mod (nostruct-align/1dgrV.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.876873
/projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t2k-w0.5.mod(21):  Reading nostruct-align/1dgrW.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27121/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t2k-w0.5.mod (nostruct-align/1dgrW.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.983881
/projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t2k-w0.5.mod(22):  Reading nostruct-align/1a41.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t2k-w0.5.mod (nostruct-align/1a41.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.088896
/projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t2k-w0.5.mod(21):  Reading nostruct-align/2tbvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-28980/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t2k-w0.5.mod (nostruct-align/2tbvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.590885
/projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t2k-w0.5.mod(22):  Reading nostruct-align/1ckmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25873/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t2k-w0.5.mod (nostruct-align/1ckmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.609890
/projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t2k-w0.5.mod(21):  Reading nostruct-align/1a44.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30221/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t2k-w0.5.mod (nostruct-align/1a44.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.049889
/projects/compbio/experiments/models.97/pdb/1g/1gjwA/nostruct-align/1gjwA.t2k-w0.5.mod(22):  Reading nostruct-align/1gjwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12650/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gjwA/nostruct-align/1gjwA.t2k-w0.5.mod (nostruct-align/1gjwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gjwA/nostruct-align/1gjwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.259869
/projects/compbio/experiments/models.97/pdb/1c/1c8kA/nostruct-align/1c8kA.t2k-w0.5.mod(21):  Reading nostruct-align/1c8kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14497/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8kA/nostruct-align/1c8kA.t2k-w0.5.mod (nostruct-align/1c8kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8kA/nostruct-align/1c8kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.065903
/projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t2k-w0.5.mod(21):  Reading nostruct-align/1vkxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8160/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t2k-w0.5.mod (nostruct-align/1vkxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.547876
/projects/compbio/experiments/models.97/pdb/1d/1di1A/nostruct-align/1di1A.t2k-w0.5.mod(22):  Reading nostruct-align/1di1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-29809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di1A/nostruct-align/1di1A.t2k-w0.5.mod (nostruct-align/1di1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1di1A/nostruct-align/1di1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.656862
/projects/compbio/experiments/models.97/pdb/1d/1dgsA/nostruct-align/1dgsA.t2k-w0.5.mod(21):  Reading nostruct-align/1dgsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26473/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgsA/nostruct-align/1dgsA.t2k-w0.5.mod (nostruct-align/1dgsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgsA/nostruct-align/1dgsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.814886
/projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t2k-w0.5.mod(22):  Reading nostruct-align/1a48.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24116/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t2k-w0.5.mod (nostruct-align/1a48.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.420876
/projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t2k-w0.5.mod(22):  Reading nostruct-align/1bvqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t2k-w0.5.mod (nostruct-align/1bvqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.081903
/projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t2k-w0.5.mod(21):  Reading nostruct-align/2ak3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-30205/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t2k-w0.5.mod (nostruct-align/2ak3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.737896
/projects/compbio/experiments/models.97/pdb/1f/1fw9A/nostruct-align/1fw9A.t2k-w0.5.mod(22):  Reading nostruct-align/1fw9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25534/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fw9A/nostruct-align/1fw9A.t2k-w0.5.mod (nostruct-align/1fw9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fw9A/nostruct-align/1fw9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.535866
/projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t2k-w0.5.mod(21):  Reading nostruct-align/1adoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t2k-w0.5.mod (nostruct-align/1adoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.614861
/projects/compbio/experiments/models.97/pdb/1e/1e25A/nostruct-align/1e25A.t2k-w0.5.mod(21):  Reading nostruct-align/1e25A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-20852/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e25A/nostruct-align/1e25A.t2k-w0.5.mod (nostruct-align/1e25A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e25A/nostruct-align/1e25A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.243889
/projects/compbio/experiments/models.97/pdb/1e/1e0wA/nostruct-align/1e0wA.t2k-w0.5.mod(21):  Reading nostruct-align/1e0wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7587/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e0wA/nostruct-align/1e0wA.t2k-w0.5.mod (nostruct-align/1e0wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e0wA/nostruct-align/1e0wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.132870
/projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t2k-w0.5.mod(22):  Reading nostruct-align/1ct5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t2k-w0.5.mod (nostruct-align/1ct5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.039885
/projects/compbio/experiments/models.97/pdb/1q/1qavA/nostruct-align/1qavA.t2k-w0.5.mod(22):  Reading nostruct-align/1qavA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27496/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qavA/nostruct-align/1qavA.t2k-w0.5.mod (nostruct-align/1qavA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qavA/nostruct-align/1qavA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.851854
/projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t2k-w0.5.mod(21):  Reading nostruct-align/2qwc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-26739/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t2k-w0.5.mod (nostruct-align/2qwc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.814871
/projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t2k-w0.5.mod(21):  Reading nostruct-align/1ngr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-16689/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t2k-w0.5.mod (nostruct-align/1ngr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.099892
/projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-w0.5.mod(21):  Reading nostruct-align/1a3c.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1042/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-w0.5.mod (nostruct-align/1a3c.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.118868
/projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t2k-w0.5.mod(22):  Reading nostruct-align/1am7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2017/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t2k-w0.5.mod (nostruct-align/1am7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.182884
/projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t2k-w0.5.mod(21):  Reading nostruct-align/1yveI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t2k-w0.5.mod (nostruct-align/1yveI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.940905
/projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t2k-w0.5.mod(21):  Reading nostruct-align/1yveJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30866/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t2k-w0.5.mod (nostruct-align/1yveJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.731874
/projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t2k-w0.5.mod(21):  Reading nostruct-align/1a3h.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-8330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t2k-w0.5.mod (nostruct-align/1a3h.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.085901
/projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t2k-w0.5.mod(22):  Reading nostruct-align/1jfrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25979/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t2k-w0.5.mod (nostruct-align/1jfrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.918865
/projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t2k-w0.5.mod(21):  Reading nostruct-align/1a3k.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6878/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t2k-w0.5.mod (nostruct-align/1a3k.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.963911
/projects/compbio/experiments/models.97/pdb/1d/1dvfD/nostruct-align/1dvfD.t2k-w0.5.mod(21):  Reading nostruct-align/1dvfD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-1024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvfD/nostruct-align/1dvfD.t2k-w0.5.mod (nostruct-align/1dvfD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvfD/nostruct-align/1dvfD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.897900
/projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t2k-w0.5.mod(21):  Reading nostruct-align/2viuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t2k-w0.5.mod (nostruct-align/2viuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.260853
/projects/compbio/experiments/models.97/pdb/1a/1a3p/nostruct-align/1a3p.t2k-w0.5.mod(22):  Reading nostruct-align/1a3p.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3p/nostruct-align/1a3p.t2k-w0.5.mod (nostruct-align/1a3p.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3p/nostruct-align/1a3p.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.747890
/projects/compbio/experiments/models.97/pdb/1i/1iqvA/nostruct-align/1iqvA.t2k-w0.5.mod(22):  Reading nostruct-align/1iqvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10306/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqvA/nostruct-align/1iqvA.t2k-w0.5.mod (nostruct-align/1iqvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iqvA/nostruct-align/1iqvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.714880
/projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t2k-w0.5.mod(21):  Reading nostruct-align/2viuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20884/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t2k-w0.5.mod (nostruct-align/2viuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.318878
/projects/compbio/experiments/models.97/pdb/1f/1fp0A/nostruct-align/1fp0A.t2k-w0.5.mod(21):  Reading nostruct-align/1fp0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-31686/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp0A/nostruct-align/1fp0A.t2k-w0.5.mod (nostruct-align/1fp0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fp0A/nostruct-align/1fp0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.373869
/projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t2k-w0.5.mod(22):  Reading nostruct-align/1a53.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5508/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t2k-w0.5.mod (nostruct-align/1a53.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.377865
/projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t2k-w0.5.mod(21):  Reading nostruct-align/1cknA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2082/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t2k-w0.5.mod (nostruct-align/1cknA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.539877
/projects/compbio/experiments/models.97/pdb/1g/1g94A/nostruct-align/1g94A.t2k-w0.5.mod(22):  Reading nostruct-align/1g94A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g94A/nostruct-align/1g94A.t2k-w0.5.mod (nostruct-align/1g94A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g94A/nostruct-align/1g94A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.671864
/projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k-w0.5.mod(22):  Reading nostruct-align/1eyvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k-w0.5.mod (nostruct-align/1eyvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eyvA/nostruct-align/1eyvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.374876
/projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t2k-w0.5.mod(22):  Reading nostruct-align/1di2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2469/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t2k-w0.5.mod (nostruct-align/1di2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.023867
/projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t2k-w0.5.mod(21):  Reading nostruct-align/1a58.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-27692/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t2k-w0.5.mod (nostruct-align/1a58.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.796875
/projects/compbio/experiments/models.97/pdb/1a/1a3z/nostruct-align/1a3z.t2k-w0.5.mod(21):  Reading nostruct-align/1a3z.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5165/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3z/nostruct-align/1a3z.t2k-w0.5.mod (nostruct-align/1a3z.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3z/nostruct-align/1a3z.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.241871
/projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k-w0.5.mod(21):  Reading nostruct-align/2hlcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-22333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k-w0.5.mod (nostruct-align/2hlcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.327868
/projects/compbio/experiments/models.97/pdb/1a/1a59/nostruct-align/1a59.t2k-w0.5.mod(21):  Reading nostruct-align/1a59.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-26936/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a59/nostruct-align/1a59.t2k-w0.5.mod (nostruct-align/1a59.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a59/nostruct-align/1a59.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.227892
/projects/compbio/experiments/models.97/pdb/1e/1ee8A/nostruct-align/1ee8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ee8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15729/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee8A/nostruct-align/1ee8A.t2k-w0.5.mod (nostruct-align/1ee8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ee8A/nostruct-align/1ee8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.219870
/projects/compbio/experiments/models.97/pdb/1c/1crxA/nostruct-align/1crxA.t2k-w0.5.mod(21):  Reading nostruct-align/1crxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crxA/nostruct-align/1crxA.t2k-w0.5.mod (nostruct-align/1crxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1crxA/nostruct-align/1crxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.902903
/projects/compbio/experiments/models.97/pdb/1i/1i0aA/nostruct-align/1i0aA.t2k-w0.5.mod(22):  Reading nostruct-align/1i0aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0aA/nostruct-align/1i0aA.t2k-w0.5.mod (nostruct-align/1i0aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0aA/nostruct-align/1i0aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.163855
/projects/compbio/experiments/models.97/pdb/1q/1qc5A/nostruct-align/1qc5A.t2k-w0.5.mod(21):  Reading nostruct-align/1qc5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3254/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qc5A/nostruct-align/1qc5A.t2k-w0.5.mod (nostruct-align/1qc5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qc5A/nostruct-align/1qc5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.021912
/projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t2k-w0.5.mod(21):  Reading nostruct-align/1nhp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17015/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t2k-w0.5.mod (nostruct-align/1nhp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.320868
/projects/compbio/experiments/models.97/pdb/1o/1or3A/nostruct-align/1or3A.t2k-w0.5.mod(22):  Reading nostruct-align/1or3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1or3A/nostruct-align/1or3A.t2k-w0.5.mod (nostruct-align/1or3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1or3A/nostruct-align/1or3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.601887
/projects/compbio/experiments/models.97/pdb/1n/1nhs/nostruct-align/1nhs.t2k-w0.5.mod(22):  Reading nostruct-align/1nhs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nhs/nostruct-align/1nhs.t2k-w0.5.mod (nostruct-align/1nhs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nhs/nostruct-align/1nhs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.660864
/projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t2k-w0.5.mod(21):  Reading nostruct-align/2cdx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-3618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t2k-w0.5.mod (nostruct-align/2cdx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.965899
/projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t2k-w0.5.mod(22):  Reading nostruct-align/1qawF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-4002/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t2k-w0.5.mod (nostruct-align/1qawF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.848907
/projects/compbio/experiments/models.97/pdb/1e/1e8aA/nostruct-align/1e8aA.t2k-w0.5.mod(21):  Reading nostruct-align/1e8aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30451/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8aA/nostruct-align/1e8aA.t2k-w0.5.mod (nostruct-align/1e8aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8aA/nostruct-align/1e8aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.969885
/projects/compbio/experiments/models.97/pdb/1i/1i7kA/nostruct-align/1i7kA.t2k-w0.5.mod(21):  Reading nostruct-align/1i7kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-22953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7kA/nostruct-align/1i7kA.t2k-w0.5.mod (nostruct-align/1i7kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7kA/nostruct-align/1i7kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.390881
/projects/compbio/experiments/models.97/pdb/1h/1huqA/nostruct-align/1huqA.t2k-w0.5.mod(21):  Reading nostruct-align/1huqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-5698/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huqA/nostruct-align/1huqA.t2k-w0.5.mod (nostruct-align/1huqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1huqA/nostruct-align/1huqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.736864
/projects/compbio/experiments/models.97/pdb/1g/1gcoA/nostruct-align/1gcoA.t2k-w0.5.mod(21):  Reading nostruct-align/1gcoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcoA/nostruct-align/1gcoA.t2k-w0.5.mod (nostruct-align/1gcoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcoA/nostruct-align/1gcoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.711891
/projects/compbio/experiments/models.97/pdb/1e/1ermA/nostruct-align/1ermA.t2k-w0.5.mod(22):  Reading nostruct-align/1ermA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-25799/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ermA/nostruct-align/1ermA.t2k-w0.5.mod (nostruct-align/1ermA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ermA/nostruct-align/1ermA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.849892
/projects/compbio/experiments/models.97/pdb/1h/1ha3A/nostruct-align/1ha3A.t2k-w0.5.mod(21):  Reading nostruct-align/1ha3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7757/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha3A/nostruct-align/1ha3A.t2k-w0.5.mod (nostruct-align/1ha3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1ha3A/nostruct-align/1ha3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.153860
/projects/compbio/experiments/models.97/pdb/1f/1fnsA/nostruct-align/1fnsA.t2k-w0.5.mod(22):  Reading nostruct-align/1fnsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2397/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnsA/nostruct-align/1fnsA.t2k-w0.5.mod (nostruct-align/1fnsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnsA/nostruct-align/1fnsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.673899
/projects/compbio/experiments/models.97/pdb/1c/1czaN/nostruct-align/1czaN.t2k-w0.5.mod(22):  Reading nostruct-align/1czaN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32467/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czaN/nostruct-align/1czaN.t2k-w0.5.mod (nostruct-align/1czaN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czaN/nostruct-align/1czaN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.085867
/projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-w0.5.mod(22):  Reading nostruct-align/1a62.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6657/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-w0.5.mod (nostruct-align/1a62.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.729860
/projects/compbio/experiments/models.97/pdb/1f/1fp1D/nostruct-align/1fp1D.t2k-w0.5.mod(22):  Reading nostruct-align/1fp1D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-779/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp1D/nostruct-align/1fp1D.t2k-w0.5.mod (nostruct-align/1fp1D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fp1D/nostruct-align/1fp1D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.563898
/projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t2k-w0.5.mod(21):  Reading nostruct-align/1nif.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-12045/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t2k-w0.5.mod (nostruct-align/1nif.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.893875
/projects/compbio/experiments/models.97/pdb/1e/1eywA/nostruct-align/1eywA.t2k-w0.5.mod(22):  Reading nostruct-align/1eywA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eywA/nostruct-align/1eywA.t2k-w0.5.mod (nostruct-align/1eywA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eywA/nostruct-align/1eywA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.381905
/projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t2k-w0.5.mod(21):  Reading nostruct-align/1dguA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14896/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t2k-w0.5.mod (nostruct-align/1dguA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.829865
/projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t2k-w0.5.mod(21):  Reading nostruct-align/1a68.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9515/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t2k-w0.5.mod (nostruct-align/1a68.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.725891
/projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t2k-w0.5.mod(21):  Reading nostruct-align/1bvsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-7596/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t2k-w0.5.mod (nostruct-align/1bvsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.389854
/projects/compbio/experiments/models.97/pdb/1e/1ee9A/nostruct-align/1ee9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ee9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11203/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ee9A/nostruct-align/1ee9A.t2k-w0.5.mod (nostruct-align/1ee9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ee9A/nostruct-align/1ee9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.673897
/projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t2k-w0.5.mod(21):  Reading nostruct-align/351c.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-5482/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t2k-w0.5.mod (nostruct-align/351c.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.604910
/projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t2k-w0.5.mod(21):  Reading nostruct-align/1qaxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17381/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t2k-w0.5.mod (nostruct-align/1qaxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.068895
/projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t2k-w0.5.mod(21):  Reading nostruct-align/1uaaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-14223/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t2k-w0.5.mod (nostruct-align/1uaaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.685862
/projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t2k-w0.5.mod(22):  Reading nostruct-align/1ush.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t2k-w0.5.mod (nostruct-align/1ush.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.735905
/projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t2k-w0.5.mod(22):  Reading nostruct-align/1am9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t2k-w0.5.mod (nostruct-align/1am9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.191872
/projects/compbio/experiments/models.97/pdb/1e/1e8bA/nostruct-align/1e8bA.t2k-w0.5.mod(21):  Reading nostruct-align/1e8bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-26439/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8bA/nostruct-align/1e8bA.t2k-w0.5.mod (nostruct-align/1e8bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8bA/nostruct-align/1e8bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.476854
/projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t2k-w0.5.mod(21):  Reading nostruct-align/1gylA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t2k-w0.5.mod (nostruct-align/1gylA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.386869
/projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t2k-w0.5.mod(21):  Reading nostruct-align/1fgjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30075/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t2k-w0.5.mod (nostruct-align/1fgjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.430876
/projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t2k-w0.5.mod(21):  Reading nostruct-align/1a5j.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-17952/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t2k-w0.5.mod (nostruct-align/1a5j.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.133907
/projects/compbio/experiments/models.97/pdb/1j/1jh2A/nostruct-align/1jh2A.t2k-w0.5.mod(22):  Reading nostruct-align/1jh2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh2A/nostruct-align/1jh2A.t2k-w0.5.mod (nostruct-align/1jh2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jh2A/nostruct-align/1jh2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.413902
/projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t2k-w0.5.mod(21):  Reading nostruct-align/1hurA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-18567/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t2k-w0.5.mod (nostruct-align/1hurA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.795883
/projects/compbio/experiments/models.97/pdb/1g/1gcpA/nostruct-align/1gcpA.t2k-w0.5.mod(21):  Reading nostruct-align/1gcpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-5912/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcpA/nostruct-align/1gcpA.t2k-w0.5.mod (nostruct-align/1gcpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcpA/nostruct-align/1gcpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.431862
/projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-w0.5.mod(22):  Reading nostruct-align/1c1dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24429/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-w0.5.mod (nostruct-align/1c1dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1dA/nostruct-align/1c1dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.955881
/projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t2k-w0.5.mod(21):  Reading nostruct-align/1a5r.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-3556/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t2k-w0.5.mod (nostruct-align/1a5r.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.377888
/projects/compbio/experiments/models.97/pdb/1a/1a70/nostruct-align/1a70.t2k-w0.5.mod(21):  Reading nostruct-align/1a70.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a70/nostruct-align/1a70.t2k-w0.5.mod (nostruct-align/1a70.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a70/nostruct-align/1a70.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.118851
/projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-w0.5.mod(22):  Reading nostruct-align/1fp2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30160/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-w0.5.mod (nostruct-align/1fp2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fp2A/nostruct-align/1fp2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.836882
/projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t2k-w0.5.mod(22):  Reading nostruct-align/1a5t.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22833/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t2k-w0.5.mod (nostruct-align/1a5t.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.879860
/projects/compbio/experiments/models.97/pdb/1c/1c8nA/nostruct-align/1c8nA.t2k-w0.5.mod(22):  Reading nostruct-align/1c8nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2272/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8nA/nostruct-align/1c8nA.t2k-w0.5.mod (nostruct-align/1c8nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8nA/nostruct-align/1c8nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.081907
/projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t2k-w0.5.mod(22):  Reading nostruct-align/1a76.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t2k-w0.5.mod (nostruct-align/1a76.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.899860
/projects/compbio/experiments/models.97/pdb/1g/1g96A/nostruct-align/1g96A.t2k-w0.5.mod(21):  Reading nostruct-align/1g96A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1615/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g96A/nostruct-align/1g96A.t2k-w0.5.mod (nostruct-align/1g96A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g96A/nostruct-align/1g96A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.315903
/projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-w0.5.mod(21):  Reading nostruct-align/1d4tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25070/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-w0.5.mod (nostruct-align/1d4tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.436869
/projects/compbio/experiments/models.97/pdb/9g/9gafA/nostruct-align/9gafA.t2k-w0.5.mod(22):  Reading nostruct-align/9gafA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4660/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9g/9gafA/nostruct-align/9gafA.t2k-w0.5.mod (nostruct-align/9gafA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9g/9gafA/nostruct-align/9gafA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.595896
/projects/compbio/experiments/models.97/pdb/1b/1bx2B/nostruct-align/1bx2B.t2k-w0.5.mod(21):  Reading nostruct-align/1bx2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-26747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bx2B/nostruct-align/1bx2B.t2k-w0.5.mod (nostruct-align/1bx2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bx2B/nostruct-align/1bx2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.031876
/projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t2k-w0.5.mod(21):  Reading nostruct-align/2eiaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-7622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t2k-w0.5.mod (nostruct-align/2eiaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.369867
/projects/compbio/experiments/models.97/pdb/1c/1crzA/nostruct-align/1crzA.t2k-w0.5.mod(22):  Reading nostruct-align/1crzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crzA/nostruct-align/1crzA.t2k-w0.5.mod (nostruct-align/1crzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1crzA/nostruct-align/1crzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.194868
/projects/compbio/experiments/models.97/pdb/1i/1i0cA/nostruct-align/1i0cA.t2k-w0.5.mod(21):  Reading nostruct-align/1i0cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25364/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0cA/nostruct-align/1i0cA.t2k-w0.5.mod (nostruct-align/1i0cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0cA/nostruct-align/1i0cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.438852
/projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t2k-w0.5.mod(22):  Reading nostruct-align/1qc7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3163/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t2k-w0.5.mod (nostruct-align/1qc7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.891872
/projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-w0.5.mod(22):  Reading nostruct-align/1utg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-15029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-w0.5.mod (nostruct-align/1utg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.512875
/projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t2k-w0.5.mod(22):  Reading nostruct-align/1regX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25673/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t2k-w0.5.mod (nostruct-align/1regX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.958885
/projects/compbio/experiments/models.97/pdb/1e/1ekeA/nostruct-align/1ekeA.t2k-w0.5.mod(22):  Reading nostruct-align/1ekeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekeA/nostruct-align/1ekeA.t2k-w0.5.mod (nostruct-align/1ekeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekeA/nostruct-align/1ekeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.996906
/projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t2k-w0.5.mod(22):  Reading nostruct-align/1a6f.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t2k-w0.5.mod (nostruct-align/1a6f.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.603865
/projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t2k-w0.5.mod(21):  Reading nostruct-align/1tlfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-22672/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t2k-w0.5.mod (nostruct-align/1tlfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.854897
/projects/compbio/experiments/models.97/pdb/1e/1e8cA/nostruct-align/1e8cA.t2k-w0.5.mod(22):  Reading nostruct-align/1e8cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22806/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8cA/nostruct-align/1e8cA.t2k-w0.5.mod (nostruct-align/1e8cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8cA/nostruct-align/1e8cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.823889
/projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t2k-w0.5.mod(21):  Reading nostruct-align/1fgkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-14399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t2k-w0.5.mod (nostruct-align/1fgkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.438883
/projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-w0.5.mod(21):  Reading nostruct-align/1jfuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-w0.5.mod (nostruct-align/1jfuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfuA/nostruct-align/1jfuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.184887
/projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t2k-w0.5.mod(21):  Reading nostruct-align/1gab.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t2k-w0.5.mod (nostruct-align/1gab.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.877893
/projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t2k-w0.5.mod(21):  Reading nostruct-align/1a6l.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-11181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t2k-w0.5.mod (nostruct-align/1a6l.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.267910
/projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-w0.5.mod(22):  Reading nostruct-align/1hw1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2482/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-w0.5.mod (nostruct-align/1hw1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hw1A/nostruct-align/1hw1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.028894
/projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-w0.5.mod(22):  Reading nostruct-align/1a6m.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19583/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-w0.5.mod (nostruct-align/1a6m.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.102892
/projects/compbio/experiments/models.97/pdb/1g/1gcqA/nostruct-align/1gcqA.t2k-w0.5.mod(21):  Reading nostruct-align/1gcqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcqA/nostruct-align/1gcqA.t2k-w0.5.mod (nostruct-align/1gcqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcqA/nostruct-align/1gcqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.203871
/projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t2k-w0.5.mod(21):  Reading nostruct-align/1vdrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-7154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t2k-w0.5.mod (nostruct-align/1vdrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.969868
/projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t2k-w0.5.mod(21):  Reading nostruct-align/1r2fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-13755/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t2k-w0.5.mod (nostruct-align/1r2fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.727900
/projects/compbio/experiments/models.97/pdb/1g/1g0oA/nostruct-align/1g0oA.t2k-w0.5.mod(21):  Reading nostruct-align/1g0oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0oA/nostruct-align/1g0oA.t2k-w0.5.mod (nostruct-align/1g0oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0oA/nostruct-align/1g0oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.457903
/projects/compbio/experiments/models.97/pdb/1a/1a6o/nostruct-align/1a6o.t2k-w0.5.mod(21):  Reading nostruct-align/1a6o.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-28518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6o/nostruct-align/1a6o.t2k-w0.5.mod (nostruct-align/1a6o.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6o/nostruct-align/1a6o.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.811905
/projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-w0.5.mod(22):  Reading nostruct-align/1gcqC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-w0.5.mod (nostruct-align/1gcqC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcqC/nostruct-align/1gcqC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.391890
/projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t2k-w0.5.mod(22):  Reading nostruct-align/1a6q.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-7419/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t2k-w0.5.mod (nostruct-align/1a6q.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.866869
/projects/compbio/experiments/models.97/pdb/1a/1a80/nostruct-align/1a80.t2k-w0.5.mod(21):  Reading nostruct-align/1a80.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a80/nostruct-align/1a80.t2k-w0.5.mod (nostruct-align/1a80.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a80/nostruct-align/1a80.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.525892
/projects/compbio/experiments/models.97/pdb/1f/1fnuA/nostruct-align/1fnuA.t2k-w0.5.mod(22):  Reading nostruct-align/1fnuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fnuA/nostruct-align/1fnuA.t2k-w0.5.mod (nostruct-align/1fnuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fnuA/nostruct-align/1fnuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.863853
/projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-w0.5.mod(22):  Reading nostruct-align/1gai.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-w0.5.mod (nostruct-align/1gai.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.520857
/projects/compbio/experiments/models.97/pdb/1f/1fp3A/nostruct-align/1fp3A.t2k-w0.5.mod(22):  Reading nostruct-align/1fp3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1944/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp3A/nostruct-align/1fp3A.t2k-w0.5.mod (nostruct-align/1fp3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fp3A/nostruct-align/1fp3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.418894
/projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t2k-w0.5.mod(21):  Reading nostruct-align/1a6s.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-25987/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t2k-w0.5.mod (nostruct-align/1a6s.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.368868
/projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t2k-w0.5.mod(21):  Reading nostruct-align/1gal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-32540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t2k-w0.5.mod (nostruct-align/1gal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.828854
/projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t2k-w0.5.mod(21):  Reading nostruct-align/1ckqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7312/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t2k-w0.5.mod (nostruct-align/1ckqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.442894
/projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-w0.5.mod(22):  Reading nostruct-align/1nkd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-w0.5.mod (nostruct-align/1nkd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.725899
/projects/compbio/experiments/models.97/pdb/1c/1c8oA/nostruct-align/1c8oA.t2k-w0.5.mod(21):  Reading nostruct-align/1c8oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8oA/nostruct-align/1c8oA.t2k-w0.5.mod (nostruct-align/1c8oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8oA/nostruct-align/1c8oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.820908
/projects/compbio/experiments/models.97/pdb/1g/1g97A/nostruct-align/1g97A.t2k-w0.5.mod(21):  Reading nostruct-align/1g97A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g97A/nostruct-align/1g97A.t2k-w0.5.mod (nostruct-align/1g97A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g97A/nostruct-align/1g97A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.511852
/projects/compbio/experiments/models.97/pdb/1e/1eyyA/nostruct-align/1eyyA.t2k-w0.5.mod(21):  Reading nostruct-align/1eyyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15606/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyyA/nostruct-align/1eyyA.t2k-w0.5.mod (nostruct-align/1eyyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eyyA/nostruct-align/1eyyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.928881
/projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-w0.5.mod(22):  Reading nostruct-align/1dgwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27566/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-w0.5.mod (nostruct-align/1dgwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.726864
/projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t2k-w0.5.mod(21):  Reading nostruct-align/1a87.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-20265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t2k-w0.5.mod (nostruct-align/1a87.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.172911
/projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t2k-w0.5.mod(21):  Reading nostruct-align/1nkl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-21909/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t2k-w0.5.mod (nostruct-align/1nkl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.103889
/projects/compbio/experiments/models.97/pdb/1i/1icfA/nostruct-align/1icfA.t2k-w0.5.mod(21):  Reading nostruct-align/1icfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-15270/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icfA/nostruct-align/1icfA.t2k-w0.5.mod (nostruct-align/1icfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1icfA/nostruct-align/1icfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.136908
/projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-w0.5.mod(22):  Reading nostruct-align/1e29A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-w0.5.mod (nostruct-align/1e29A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e29A/nostruct-align/1e29A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.549866
/projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ct9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-19126/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t2k-w0.5.mod (nostruct-align/1ct9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.829868
/projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-w0.5.mod(22):  Reading nostruct-align/1i0dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13413/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-w0.5.mod (nostruct-align/1i0dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0dA/nostruct-align/1i0dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.355906
/projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t2k-w0.5.mod(21):  Reading nostruct-align/1icfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31257/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t2k-w0.5.mod (nostruct-align/1icfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.683857
/projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-w0.5.mod(21):  Reading nostruct-align/1qazA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28849/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-w0.5.mod (nostruct-align/1qazA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.623850
/projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-w0.5.mod(22):  Reading nostruct-align/1nkr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11660/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-w0.5.mod (nostruct-align/1nkr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.052893
/projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-w0.5.mod(21):  Reading nostruct-align/1hnjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26258/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-w0.5.mod (nostruct-align/1hnjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hnjA/nostruct-align/1hnjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.402851
/projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t2k-w0.5.mod(22):  Reading nostruct-align/1icfI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30133/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t2k-w0.5.mod (nostruct-align/1icfI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.355856
/projects/compbio/experiments/models.97/pdb/1e/1ekfA/nostruct-align/1ekfA.t2k-w0.5.mod(22):  Reading nostruct-align/1ekfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekfA/nostruct-align/1ekfA.t2k-w0.5.mod (nostruct-align/1ekfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekfA/nostruct-align/1ekfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.936903
/projects/compbio/experiments/models.97/pdb/1t/1tlgA/nostruct-align/1tlgA.t2k-w0.5.mod(22):  Reading nostruct-align/1tlgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-17060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tlgA/nostruct-align/1tlgA.t2k-w0.5.mod (nostruct-align/1tlgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tlgA/nostruct-align/1tlgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.869879
/projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t2k-w0.5.mod(21):  Reading nostruct-align/2bmhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5880/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t2k-w0.5.mod (nostruct-align/2bmhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.605885
/projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t2k-w0.5.mod(22):  Reading nostruct-align/1a7j.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1264/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t2k-w0.5.mod (nostruct-align/1a7j.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.035908
/projects/compbio/experiments/models.97/pdb/1j/1jfvA/nostruct-align/1jfvA.t2k-w0.5.mod(22):  Reading nostruct-align/1jfvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfvA/nostruct-align/1jfvA.t2k-w0.5.mod (nostruct-align/1jfvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfvA/nostruct-align/1jfvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.441879
/projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t2k-w0.5.mod(22):  Reading nostruct-align/1dvjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28753/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t2k-w0.5.mod (nostruct-align/1dvjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.568905
/projects/compbio/experiments/models.97/pdb/1d/1dvjC/nostruct-align/1dvjC.t2k-w0.5.mod(21):  Reading nostruct-align/1dvjC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-10140/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvjC/nostruct-align/1dvjC.t2k-w0.5.mod (nostruct-align/1dvjC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvjC/nostruct-align/1dvjC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.473900
/projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t2k-w0.5.mod(22):  Reading nostruct-align/1dgwX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8299/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t2k-w0.5.mod (nostruct-align/1dgwX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.891851
/projects/compbio/experiments/models.97/pdb/1i/1is8A/nostruct-align/1is8A.t2k-w0.5.mod(22):  Reading nostruct-align/1is8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5204/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1is8A/nostruct-align/1is8A.t2k-w0.5.mod (nostruct-align/1is8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1is8A/nostruct-align/1is8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.385872
/projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-w0.5.mod(22):  Reading nostruct-align/1iqzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6061/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-w0.5.mod (nostruct-align/1iqzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iqzA/nostruct-align/1iqzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.902870
/projects/compbio/experiments/models.97/pdb/1g/1gbg/nostruct-align/1gbg.t2k-w0.5.mod(22):  Reading nostruct-align/1gbg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17658/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gbg/nostruct-align/1gbg.t2k-w0.5.mod (nostruct-align/1gbg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gbg/nostruct-align/1gbg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.307905
/projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t2k-w0.5.mod(22):  Reading nostruct-align/1dgwY.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13300/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t2k-w0.5.mod (nostruct-align/1dgwY.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.846897
/projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t2k-w0.5.mod(21):  Reading nostruct-align/1bolA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-984/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t2k-w0.5.mod (nostruct-align/1bolA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.480894
/projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-w0.5.mod(21):  Reading nostruct-align/1a7s.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-24049/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-w0.5.mod (nostruct-align/1a7s.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.659901
/projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t2k-w0.5.mod(21):  Reading nostruct-align/1a91.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7702/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t2k-w0.5.mod (nostruct-align/1a91.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.188896
/projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t2k-w0.5.mod(21):  Reading nostruct-align/1qpmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-18247/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t2k-w0.5.mod (nostruct-align/1qpmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.667891
/projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t2k-w0.5.mod(21):  Reading nostruct-align/1azpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-15906/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t2k-w0.5.mod (nostruct-align/1azpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.770901
/projects/compbio/experiments/models.97/pdb/1c/1c8pA/nostruct-align/1c8pA.t2k-w0.5.mod(21):  Reading nostruct-align/1c8pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8pA/nostruct-align/1c8pA.t2k-w0.5.mod (nostruct-align/1c8pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8pA/nostruct-align/1c8pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.650854
/projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t2k-w0.5.mod(21):  Reading nostruct-align/1a7w.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t2k-w0.5.mod (nostruct-align/1a7w.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.546907
/projects/compbio/experiments/models.97/pdb/1e/1eyzA/nostruct-align/1eyzA.t2k-w0.5.mod(22):  Reading nostruct-align/1eyzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15923/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eyzA/nostruct-align/1eyzA.t2k-w0.5.mod (nostruct-align/1eyzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eyzA/nostruct-align/1eyzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.262877
/projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-w0.5.mod(22):  Reading nostruct-align/1k7cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-16082/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-w0.5.mod (nostruct-align/1k7cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k7cA/nostruct-align/1k7cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.896887
/projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k-w0.5.mod(22):  Reading nostruct-align/1di6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k-w0.5.mod (nostruct-align/1di6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.157869
/projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t2k-w0.5.mod(21):  Reading nostruct-align/1d4vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4436/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t2k-w0.5.mod (nostruct-align/1d4vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.490883
/projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-w0.5.mod(22):  Reading nostruct-align/1bx4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11093/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-w0.5.mod (nostruct-align/1bx4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.306900
/projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-w0.5.mod(21):  Reading nostruct-align/1gbs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-23551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-w0.5.mod (nostruct-align/1gbs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.103905
/projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t2k-w0.5.mod(21):  Reading nostruct-align/1d4vB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17090/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t2k-w0.5.mod (nostruct-align/1d4vB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.801889
/projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t2k-w0.5.mod(21):  Reading nostruct-align/3rabA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28125/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t2k-w0.5.mod (nostruct-align/3rabA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.890862
/projects/compbio/experiments/models.97/pdb/1q/1qc9A/nostruct-align/1qc9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qc9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-31077/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qc9A/nostruct-align/1qc9A.t2k-w0.5.mod (nostruct-align/1qc9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qc9A/nostruct-align/1qc9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.958885
/projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t2k-w0.5.mod(21):  Reading nostruct-align/1a8b.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t2k-w0.5.mod (nostruct-align/1a8b.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.263851
/projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t2k-w0.5.mod(22):  Reading nostruct-align/1nlr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28811/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t2k-w0.5.mod (nostruct-align/1nlr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.657907
/projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-w0.5.mod(22):  Reading nostruct-align/1nls.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2368/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-w0.5.mod (nostruct-align/1nls.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.780855
/projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-w0.5.mod(22):  Reading nostruct-align/1a8d.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-w0.5.mod (nostruct-align/1a8d.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.126881
/projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t2k-w0.5.mod(22):  Reading nostruct-align/1a8e.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27304/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t2k-w0.5.mod (nostruct-align/1a8e.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.800905
/projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-w0.5.mod(21):  Reading nostruct-align/1ekgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8608/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-w0.5.mod (nostruct-align/1ekgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekgA/nostruct-align/1ekgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.884865
/projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-w0.5.mod(22):  Reading nostruct-align/1ijqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14931/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-w0.5.mod (nostruct-align/1ijqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijqA/nostruct-align/1ijqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.924877
/projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t2k-w0.5.mod(21):  Reading nostruct-align/1a8h.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-8417/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t2k-w0.5.mod (nostruct-align/1a8h.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.230873
/projects/compbio/experiments/models.97/pdb/1i/1i7oA/nostruct-align/1i7oA.t2k-w0.5.mod(22):  Reading nostruct-align/1i7oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19773/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7oA/nostruct-align/1i7oA.t2k-w0.5.mod (nostruct-align/1i7oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7oA/nostruct-align/1i7oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.502872
/projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t2k-w0.5.mod(22):  Reading nostruct-align/1a8i.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-31970/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t2k-w0.5.mod (nostruct-align/1a8i.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.106897
/projects/compbio/experiments/models.97/pdb/1q/1qidA/nostruct-align/1qidA.t2k-w0.5.mod(22):  Reading nostruct-align/1qidA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qidA/nostruct-align/1qidA.t2k-w0.5.mod (nostruct-align/1qidA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qidA/nostruct-align/1qidA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.569860
/projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-w0.5.mod(21):  Reading nostruct-align/1gca.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-w0.5.mod (nostruct-align/1gca.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.001873
/projects/compbio/experiments/models.97/pdb/1f/1f4kA/nostruct-align/1f4kA.t2k-w0.5.mod(22):  Reading nostruct-align/1f4kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12687/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4kA/nostruct-align/1f4kA.t2k-w0.5.mod (nostruct-align/1f4kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f4kA/nostruct-align/1f4kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.252855
/projects/compbio/experiments/models.97/pdb/1j/1jfwA/nostruct-align/1jfwA.t2k-w0.5.mod(21):  Reading nostruct-align/1jfwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-17543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfwA/nostruct-align/1jfwA.t2k-w0.5.mod (nostruct-align/1jfwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfwA/nostruct-align/1jfwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.890860
/projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t2k-w0.5.mod(21):  Reading nostruct-align/1gcb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t2k-w0.5.mod (nostruct-align/1gcb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.475895
/projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t2k-w0.5.mod(22):  Reading nostruct-align/1dvkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t2k-w0.5.mod (nostruct-align/1dvkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.540869
/projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t2k-w0.5.mod(22):  Reading nostruct-align/1a8l.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12230/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t2k-w0.5.mod (nostruct-align/1a8l.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.353876
/projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t2k-w0.5.mod(21):  Reading nostruct-align/1huuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-16371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t2k-w0.5.mod (nostruct-align/1huuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.609875
/projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t2k-w0.5.mod(21):  Reading nostruct-align/1c1gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18833/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t2k-w0.5.mod (nostruct-align/1c1gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.310852
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Reading nostruct-align/7odcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod (nostruct-align/7odcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.318863
/projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-w0.5.mod(22):  Reading nostruct-align/1a8o.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-w0.5.mod (nostruct-align/1a8o.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.108892
/projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t2k-w0.5.mod(21):  Reading nostruct-align/1c1gB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-31031/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t2k-w0.5.mod (nostruct-align/1c1gB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.310852
/projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t2k-w0.5.mod(21):  Reading nostruct-align/1gcf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t2k-w0.5.mod (nostruct-align/1gcf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.438890
/projects/compbio/experiments/models.97/pdb/1a/1a8p/nostruct-align/1a8p.t2k-w0.5.mod(21):  Reading nostruct-align/1a8p.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23545/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8p/nostruct-align/1a8p.t2k-w0.5.mod (nostruct-align/1a8p.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8p/nostruct-align/1a8p.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.539886
/projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t2k-w0.5.mod(21):  Reading nostruct-align/1c1gC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-28409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t2k-w0.5.mod (nostruct-align/1c1gC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.376909
/projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t2k-w0.5.mod(21):  Reading nostruct-align/1a8q.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t2k-w0.5.mod (nostruct-align/1a8q.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.870865
/projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t2k-w0.5.mod(21):  Reading nostruct-align/1c1gD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t2k-w0.5.mod (nostruct-align/1c1gD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.376909
/projects/compbio/experiments/models.97/pdb/1b/1bomA/nostruct-align/1bomA.t2k-w0.5.mod(21):  Reading nostruct-align/1bomA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bomA/nostruct-align/1bomA.t2k-w0.5.mod (nostruct-align/1bomA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bomA/nostruct-align/1bomA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.514908
/projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t2k-w0.5.mod(21):  Reading nostruct-align/1spbP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-31218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t2k-w0.5.mod (nostruct-align/1spbP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.550911
/projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-w0.5.mod(22):  Reading nostruct-align/1gci.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16150/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-w0.5.mod (nostruct-align/1gci.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.529882
/projects/compbio/experiments/models.97/pdb/1a/1a8s/nostruct-align/1a8s.t2k-w0.5.mod(21):  Reading nostruct-align/1a8s.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8s/nostruct-align/1a8s.t2k-w0.5.mod (nostruct-align/1a8s.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8s/nostruct-align/1a8s.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.930862
/projects/compbio/experiments/models.97/pdb/1b/1bomB/nostruct-align/1bomB.t2k-w0.5.mod(21):  Reading nostruct-align/1bomB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-15008/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bomB/nostruct-align/1bomB.t2k-w0.5.mod (nostruct-align/1bomB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bomB/nostruct-align/1bomB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.930857
/projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t2k-w0.5.mod(21):  Reading nostruct-align/1azqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-32480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t2k-w0.5.mod (nostruct-align/1azqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.770901
/projects/compbio/experiments/models.97/pdb/1g/1g99A/nostruct-align/1g99A.t2k-w0.5.mod(22):  Reading nostruct-align/1g99A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-5243/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g99A/nostruct-align/1g99A.t2k-w0.5.mod (nostruct-align/1g99A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g99A/nostruct-align/1g99A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.521904
/projects/compbio/experiments/models.97/pdb/1d/1dgyA/nostruct-align/1dgyA.t2k-w0.5.mod(21):  Reading nostruct-align/1dgyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-22765/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgyA/nostruct-align/1dgyA.t2k-w0.5.mod (nostruct-align/1dgyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgyA/nostruct-align/1dgyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.979881
/projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t2k-w0.5.mod(22):  Reading nostruct-align/1a8y.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-3797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t2k-w0.5.mod (nostruct-align/1a8y.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.705875
/projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t2k-w0.5.mod(21):  Reading nostruct-align/1bvwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7541/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t2k-w0.5.mod (nostruct-align/1bvwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.238909
/projects/compbio/experiments/models.97/pdb/1a/1a31A/nostruct-align/1a31A.t2k-w0.5.mod(22):  Reading nostruct-align/1a31A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-17725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a31A/nostruct-align/1a31A.t2k-w0.5.mod (nostruct-align/1a31A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a31A/nostruct-align/1a31A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.889908
/projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t2k-w0.5.mod(21):  Reading nostruct-align/2cxbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21204/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t2k-w0.5.mod (nostruct-align/2cxbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.881863
/projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t2k-w0.5.mod(21):  Reading nostruct-align/1vsgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t2k-w0.5.mod (nostruct-align/1vsgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.673866
/projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t2k-w0.5.mod(22):  Reading nostruct-align/1czfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t2k-w0.5.mod (nostruct-align/1czfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.340874
/projects/compbio/experiments/models.97/pdb/1i/1i7pA/nostruct-align/1i7pA.t2k-w0.5.mod(22):  Reading nostruct-align/1i7pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7pA/nostruct-align/1i7pA.t2k-w0.5.mod (nostruct-align/1i7pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7pA/nostruct-align/1i7pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.004877
/projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t2k-w0.5.mod(21):  Reading nostruct-align/1gypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16043/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t2k-w0.5.mod (nostruct-align/1gypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.745899
/projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t2k-w0.5.mod(21):  Reading nostruct-align/1bhdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t2k-w0.5.mod (nostruct-align/1bhdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.817854
/projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-w0.5.mod(22):  Reading nostruct-align/1jh6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-w0.5.mod (nostruct-align/1jh6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jh6A/nostruct-align/1jh6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.387903
/projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-w0.5.mod(22):  Reading nostruct-align/1jfxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-w0.5.mod (nostruct-align/1jfxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfxA/nostruct-align/1jfxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.701908
/projects/compbio/experiments/models.97/pdb/1f/1f4lA/nostruct-align/1f4lA.t2k-w0.5.mod(22):  Reading nostruct-align/1f4lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-6057/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4lA/nostruct-align/1f4lA.t2k-w0.5.mod (nostruct-align/1f4lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f4lA/nostruct-align/1f4lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.151884
/projects/compbio/experiments/models.97/pdb/1g/1gdc/nostruct-align/1gdc.t2k-w0.5.mod(21):  Reading nostruct-align/1gdc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3345/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdc/nostruct-align/1gdc.t2k-w0.5.mod (nostruct-align/1gdc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gdc/nostruct-align/1gdc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.530882
/projects/compbio/experiments/models.97/pdb/1h/1huvA/nostruct-align/1huvA.t2k-w0.5.mod(22):  Reading nostruct-align/1huvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huvA/nostruct-align/1huvA.t2k-w0.5.mod (nostruct-align/1huvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1huvA/nostruct-align/1huvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.176903
/projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t2k-w0.5.mod(22):  Reading nostruct-align/1gctA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t2k-w0.5.mod (nostruct-align/1gctA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.512892
/projects/compbio/experiments/models.97/pdb/1g/1g0rA/nostruct-align/1g0rA.t2k-w0.5.mod(21):  Reading nostruct-align/1g0rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11539/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0rA/nostruct-align/1g0rA.t2k-w0.5.mod (nostruct-align/1g0rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0rA/nostruct-align/1g0rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.639856
/projects/compbio/experiments/models.97/pdb/1e/1et0A/nostruct-align/1et0A.t2k-w0.5.mod(22):  Reading nostruct-align/1et0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et0A/nostruct-align/1et0A.t2k-w0.5.mod (nostruct-align/1et0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1et0A/nostruct-align/1et0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.835876
/projects/compbio/experiments/models.97/pdb/1f/1fp6A/nostruct-align/1fp6A.t2k-w0.5.mod(22):  Reading nostruct-align/1fp6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19549/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fp6A/nostruct-align/1fp6A.t2k-w0.5.mod (nostruct-align/1fp6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fp6A/nostruct-align/1fp6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.698887
/projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t2k-w0.5.mod(22):  Reading nostruct-align/1qpoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t2k-w0.5.mod (nostruct-align/1qpoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.342878
/projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t2k-w0.5.mod(21):  Reading nostruct-align/1cktA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-25508/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t2k-w0.5.mod (nostruct-align/1cktA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.063904
/projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t2k-w0.5.mod(21):  Reading nostruct-align/1a9v.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-23762/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t2k-w0.5.mod (nostruct-align/1a9v.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.664875
/projects/compbio/experiments/models.97/pdb/1d/1dgzA/nostruct-align/1dgzA.t2k-w0.5.mod(21):  Reading nostruct-align/1dgzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6162/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dgzA/nostruct-align/1dgzA.t2k-w0.5.mod (nostruct-align/1dgzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dgzA/nostruct-align/1dgzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.413891
/projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t2k-w0.5.mod(21):  Reading nostruct-align/1d66A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17788/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t2k-w0.5.mod (nostruct-align/1d66A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.925886
/projects/compbio/experiments/models.97/pdb/1d/1d4xA/nostruct-align/1d4xA.t2k-w0.5.mod(21):  Reading nostruct-align/1d4xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29623/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4xA/nostruct-align/1d4xA.t2k-w0.5.mod (nostruct-align/1d4xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4xA/nostruct-align/1d4xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.702866
/projects/compbio/experiments/models.97/pdb/1f/1fvaA/nostruct-align/1fvaA.t2k-w0.5.mod(21):  Reading nostruct-align/1fvaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-31937/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvaA/nostruct-align/1fvaA.t2k-w0.5.mod (nostruct-align/1fvaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvaA/nostruct-align/1fvaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.545868
/projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-w0.5.mod(22):  Reading nostruct-align/1l3kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-4085/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-w0.5.mod (nostruct-align/1l3kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l3kA/nostruct-align/1l3kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.910891
/projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t2k-w0.5.mod(21):  Reading nostruct-align/1a1tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-16936/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t2k-w0.5.mod (nostruct-align/1a1tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.632853
/projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t2k-w0.5.mod(21):  Reading nostruct-align/1uxc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-6099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t2k-w0.5.mod (nostruct-align/1uxc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.061861
/projects/compbio/experiments/models.97/pdb/1i/1iciA/nostruct-align/1iciA.t2k-w0.5.mod(21):  Reading nostruct-align/1iciA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iciA/nostruct-align/1iciA.t2k-w0.5.mod (nostruct-align/1iciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iciA/nostruct-align/1iciA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.270893
/projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t2k-w0.5.mod(21):  Reading nostruct-align/1uxd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-26225/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t2k-w0.5.mod (nostruct-align/1uxd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.295908
/projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-w0.5.mod(22):  Reading nostruct-align/1d4xG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12223/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-w0.5.mod (nostruct-align/1d4xG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d4xG/nostruct-align/1d4xG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.988882
/projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t2k-w0.5.mod(21):  Reading nostruct-align/1nnt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-5239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t2k-w0.5.mod (nostruct-align/1nnt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.119900
/projects/compbio/experiments/models.97/pdb/1e/1e8gA/nostruct-align/1e8gA.t2k-w0.5.mod(22):  Reading nostruct-align/1e8gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8gA/nostruct-align/1e8gA.t2k-w0.5.mod (nostruct-align/1e8gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8gA/nostruct-align/1e8gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.887873
/projects/compbio/experiments/models.97/pdb/1i/1i7qA/nostruct-align/1i7qA.t2k-w0.5.mod(21):  Reading nostruct-align/1i7qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-4316/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7qA/nostruct-align/1i7qA.t2k-w0.5.mod (nostruct-align/1i7qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7qA/nostruct-align/1i7qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.752890
/projects/compbio/experiments/models.97/pdb/1i/1i7qB/nostruct-align/1i7qB.t2k-w0.5.mod(22):  Reading nostruct-align/1i7qB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30802/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7qB/nostruct-align/1i7qB.t2k-w0.5.mod (nostruct-align/1i7qB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7qB/nostruct-align/1i7qB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.760904
/projects/compbio/experiments/models.97/pdb/1h/1hw5A/nostruct-align/1hw5A.t2k-w0.5.mod(22):  Reading nostruct-align/1hw5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw5A/nostruct-align/1hw5A.t2k-w0.5.mod (nostruct-align/1hw5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hw5A/nostruct-align/1hw5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.784903
/projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t2k-w0.5.mod(21):  Reading nostruct-align/1cdkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-17776/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t2k-w0.5.mod (nostruct-align/1cdkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.068867
/projects/compbio/experiments/models.97/pdb/1g/1gcuA/nostruct-align/1gcuA.t2k-w0.5.mod(22):  Reading nostruct-align/1gcuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcuA/nostruct-align/1gcuA.t2k-w0.5.mod (nostruct-align/1gcuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcuA/nostruct-align/1gcuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.228897
/projects/compbio/experiments/models.97/pdb/1g/1g0sA/nostruct-align/1g0sA.t2k-w0.5.mod(22):  Reading nostruct-align/1g0sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-713/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0sA/nostruct-align/1g0sA.t2k-w0.5.mod (nostruct-align/1g0sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0sA/nostruct-align/1g0sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.494911
/projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k-w0.5.mod(22):  Reading nostruct-align/1et1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13706/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k-w0.5.mod (nostruct-align/1et1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1et1A/nostruct-align/1et1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.694889
/projects/compbio/experiments/models.97/pdb/1h/1ha9A/nostruct-align/1ha9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ha9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-27288/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha9A/nostruct-align/1ha9A.t2k-w0.5.mod (nostruct-align/1ha9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1ha9A/nostruct-align/1ha9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.121870
/projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t2k-w0.5.mod(21):  Reading nostruct-align/1booA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t2k-w0.5.mod (nostruct-align/1booA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.414885
/projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-w0.5.mod(22):  Reading nostruct-align/1uxy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28361/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-w0.5.mod (nostruct-align/1uxy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.057899
/projects/compbio/experiments/models.97/pdb/1q/1qppA/nostruct-align/1qppA.t2k-w0.5.mod(21):  Reading nostruct-align/1qppA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qppA/nostruct-align/1qppA.t2k-w0.5.mod (nostruct-align/1qppA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qppA/nostruct-align/1qppA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.183884
/projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t2k-w0.5.mod(21):  Reading nostruct-align/1noa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t2k-w0.5.mod (nostruct-align/1noa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.407881
/projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t2k-w0.5.mod(21):  Reading nostruct-align/1ckuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-16600/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t2k-w0.5.mod (nostruct-align/1ckuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.731867
/projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t2k-w0.5.mod(21):  Reading nostruct-align/1gen.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-15102/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t2k-w0.5.mod (nostruct-align/1gen.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.847872
/projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t2k-w0.5.mod(22):  Reading nostruct-align/1azsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27019/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t2k-w0.5.mod (nostruct-align/1azsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.398888
/projects/compbio/experiments/models.97/pdb/1a/1azsB/nostruct-align/1azsB.t2k-w0.5.mod(21):  Reading nostruct-align/1azsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10117/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azsB/nostruct-align/1azsB.t2k-w0.5.mod (nostruct-align/1azsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azsB/nostruct-align/1azsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.268906
/projects/compbio/experiments/models.97/pdb/2e/2eifA/nostruct-align/2eifA.t2k-w0.5.mod(22):  Reading nostruct-align/2eifA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-24739/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eifA/nostruct-align/2eifA.t2k-w0.5.mod (nostruct-align/2eifA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2eifA/nostruct-align/2eifA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.999895
/projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t2k-w0.5.mod(21):  Reading nostruct-align/1nom.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-22173/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t2k-w0.5.mod (nostruct-align/1nom.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.455870
/projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t2k-w0.5.mod(21):  Reading nostruct-align/1icjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28243/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t2k-w0.5.mod (nostruct-align/1icjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.372868
/projects/compbio/experiments/models.97/pdb/1i/1i0hA/nostruct-align/1i0hA.t2k-w0.5.mod(22):  Reading nostruct-align/1i0hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0hA/nostruct-align/1i0hA.t2k-w0.5.mod (nostruct-align/1i0hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0hA/nostruct-align/1i0hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.972870
/projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t2k-w0.5.mod(21):  Reading nostruct-align/1bvyF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-18220/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t2k-w0.5.mod (nostruct-align/1bvyF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.747856
/projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-w0.5.mod(22):  Reading nostruct-align/1kqrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22125/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-w0.5.mod (nostruct-align/1kqrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kqrA/nostruct-align/1kqrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.394855
/projects/compbio/experiments/models.97/pdb/1h/1hnnA/nostruct-align/1hnnA.t2k-w0.5.mod(22):  Reading nostruct-align/1hnnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnnA/nostruct-align/1hnnA.t2k-w0.5.mod (nostruct-align/1hnnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hnnA/nostruct-align/1hnnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.004854
/projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t2k-w0.5.mod(21):  Reading nostruct-align/2prgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-17721/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t2k-w0.5.mod (nostruct-align/2prgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.510889
/projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t2k-w0.5.mod(21):  Reading nostruct-align/1pmaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-11487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t2k-w0.5.mod (nostruct-align/1pmaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.550877
/projects/compbio/experiments/models.97/pdb/1e/1ekjA/nostruct-align/1ekjA.t2k-w0.5.mod(22):  Reading nostruct-align/1ekjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4576/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekjA/nostruct-align/1ekjA.t2k-w0.5.mod (nostruct-align/1ekjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekjA/nostruct-align/1ekjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.511881
/projects/compbio/experiments/models.97/pdb/1i/1ijtA/nostruct-align/1ijtA.t2k-w0.5.mod(22):  Reading nostruct-align/1ijtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17813/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijtA/nostruct-align/1ijtA.t2k-w0.5.mod (nostruct-align/1ijtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijtA/nostruct-align/1ijtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.129890
/projects/compbio/experiments/models.97/pdb/1e/1ekjB/nostruct-align/1ekjB.t2k-w0.5.mod(21):  Reading nostruct-align/1ekjB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-13804/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekjB/nostruct-align/1ekjB.t2k-w0.5.mod (nostruct-align/1ekjB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekjB/nostruct-align/1ekjB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.458908
/projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t2k-w0.5.mod(21):  Reading nostruct-align/2prgC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-17555/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t2k-w0.5.mod (nostruct-align/2prgC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.995859
/projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-w0.5.mod(22):  Reading nostruct-align/1nox.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25301/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-w0.5.mod (nostruct-align/1nox.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.724888
/projects/compbio/experiments/models.97/pdb/1j/1jfzA/nostruct-align/1jfzA.t2k-w0.5.mod(22):  Reading nostruct-align/1jfzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17974/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jfzA/nostruct-align/1jfzA.t2k-w0.5.mod (nostruct-align/1jfzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jfzA/nostruct-align/1jfzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.494860
/projects/compbio/experiments/models.97/pdb/1j/1jh8A/nostruct-align/1jh8A.t2k-w0.5.mod(22):  Reading nostruct-align/1jh8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28843/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jh8A/nostruct-align/1jh8A.t2k-w0.5.mod (nostruct-align/1jh8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jh8A/nostruct-align/1jh8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.503887
/projects/compbio/experiments/models.97/pdb/1h/1hw6A/nostruct-align/1hw6A.t2k-w0.5.mod(21):  Reading nostruct-align/1hw6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4213/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw6A/nostruct-align/1hw6A.t2k-w0.5.mod (nostruct-align/1hw6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hw6A/nostruct-align/1hw6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.025898
/projects/compbio/experiments/models.97/pdb/1h/1huxA/nostruct-align/1huxA.t2k-w0.5.mod(22):  Reading nostruct-align/1huxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16640/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huxA/nostruct-align/1huxA.t2k-w0.5.mod (nostruct-align/1huxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1huxA/nostruct-align/1huxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.533884
/projects/compbio/experiments/models.97/pdb/1g/1gcvA/nostruct-align/1gcvA.t2k-w0.5.mod(21):  Reading nostruct-align/1gcvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-27879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcvA/nostruct-align/1gcvA.t2k-w0.5.mod (nostruct-align/1gcvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcvA/nostruct-align/1gcvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.100897
/projects/compbio/experiments/models.97/pdb/1g/1gcvB/nostruct-align/1gcvB.t2k-w0.5.mod(21):  Reading nostruct-align/1gcvB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29106/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcvB/nostruct-align/1gcvB.t2k-w0.5.mod (nostruct-align/1gcvB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcvB/nostruct-align/1gcvB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.314865
/projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t2k-w0.5.mod(21):  Reading nostruct-align/2btvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-12529/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t2k-w0.5.mod (nostruct-align/2btvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.374886
/projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t2k-w0.5.mod(21):  Reading nostruct-align/1pmaP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30496/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t2k-w0.5.mod (nostruct-align/1pmaP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.810850
/projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t2k-w0.5.mod(21):  Reading nostruct-align/1hgeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17549/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t2k-w0.5.mod (nostruct-align/1hgeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.996897
/projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t2k-w0.5.mod(21):  Reading nostruct-align/1bvzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-7789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t2k-w0.5.mod (nostruct-align/1bvzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.600910
/projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t2k-w0.5.mod(21):  Reading nostruct-align/1hgeB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31008/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t2k-w0.5.mod (nostruct-align/1hgeB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.307863
/projects/compbio/experiments/models.97/pdb/1a/1af6A/nostruct-align/1af6A.t2k-w0.5.mod(21):  Reading nostruct-align/1af6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-14844/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af6A/nostruct-align/1af6A.t2k-w0.5.mod (nostruct-align/1af6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1af6A/nostruct-align/1af6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.479860
/projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-w0.5.mod(22):  Reading nostruct-align/1npk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27531/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-w0.5.mod (nostruct-align/1npk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.453897
/projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t2k-w0.5.mod(22):  Reading nostruct-align/1a34A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t2k-w0.5.mod (nostruct-align/1a34A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.750891
/projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t2k-w0.5.mod(21):  Reading nostruct-align/2yhx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-3651/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t2k-w0.5.mod (nostruct-align/2yhx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.001863
/projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t2k-w0.5.mod(21):  Reading nostruct-align/1griA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-22444/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t2k-w0.5.mod (nostruct-align/1griA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.903904
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Reading nostruct-align/1hnoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -36.946888
/projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t2k-w0.5.mod(21):  Reading nostruct-align/1bhgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t2k-w0.5.mod (nostruct-align/1bhgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.194897
/projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-w0.5.mod(21):  Reading nostruct-align/1b5eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11590/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-w0.5.mod (nostruct-align/1b5eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.189899
/projects/compbio/experiments/models.97/pdb/1d/1dvoA/nostruct-align/1dvoA.t2k-w0.5.mod(22):  Reading nostruct-align/1dvoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvoA/nostruct-align/1dvoA.t2k-w0.5.mod (nostruct-align/1dvoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvoA/nostruct-align/1dvoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.797884
/projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t2k-w0.5.mod(21):  Reading nostruct-align/1nfdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-29693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t2k-w0.5.mod (nostruct-align/1nfdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.559851
/projects/compbio/experiments/models.97/pdb/1h/1hw7A/nostruct-align/1hw7A.t2k-w0.5.mod(22):  Reading nostruct-align/1hw7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17252/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw7A/nostruct-align/1hw7A.t2k-w0.5.mod (nostruct-align/1hw7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hw7A/nostruct-align/1hw7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.763882
/projects/compbio/experiments/models.97/pdb/1g/1ge5A/nostruct-align/1ge5A.t2k-w0.5.mod(21):  Reading nostruct-align/1ge5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10961/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ge5A/nostruct-align/1ge5A.t2k-w0.5.mod (nostruct-align/1ge5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ge5A/nostruct-align/1ge5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.412878
/projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-w0.5.mod(22):  Reading nostruct-align/1c1kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-w0.5.mod (nostruct-align/1c1kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.691883
/projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t2k-w0.5.mod(21):  Reading nostruct-align/1db1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-13487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t2k-w0.5.mod (nostruct-align/1db1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.916868
/projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t2k-w0.5.mod(21):  Reading nostruct-align/2cmd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-8161/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t2k-w0.5.mod (nostruct-align/2cmd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.447872
/projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t2k-w0.5.mod(22):  Reading nostruct-align/1qr0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t2k-w0.5.mod (nostruct-align/1qr0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.227896
/projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-w0.5.mod(22):  Reading nostruct-align/1jndA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-w0.5.mod (nostruct-align/1jndA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jndA/nostruct-align/1jndA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.599905
/projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t2k-w0.5.mod(22):  Reading nostruct-align/1cm5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t2k-w0.5.mod (nostruct-align/1cm5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.097879
/projects/compbio/experiments/models.97/pdb/1c/1ckwA/nostruct-align/1ckwA.t2k-w0.5.mod(21):  Reading nostruct-align/1ckwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-13058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckwA/nostruct-align/1ckwA.t2k-w0.5.mod (nostruct-align/1ckwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckwA/nostruct-align/1ckwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.346853
/projects/compbio/experiments/models.97/pdb/4t/4tmkA/nostruct-align/4tmkA.t2k-w0.5.mod(21):  Reading nostruct-align/4tmkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4t/4tmkA/nostruct-align/4tmkA.t2k-w0.5.mod (nostruct-align/4tmkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4t/4tmkA/nostruct-align/4tmkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.731869
/projects/compbio/experiments/models.97/pdb/1c/1c8uA/nostruct-align/1c8uA.t2k-w0.5.mod(22):  Reading nostruct-align/1c8uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11082/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8uA/nostruct-align/1c8uA.t2k-w0.5.mod (nostruct-align/1c8uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8uA/nostruct-align/1c8uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.976898
/projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t2k-w0.5.mod(21):  Reading nostruct-align/1junA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17299/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t2k-w0.5.mod (nostruct-align/1junA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.427906
/projects/compbio/experiments/models.97/pdb/1d/1dofA/nostruct-align/1dofA.t2k-w0.5.mod(21):  Reading nostruct-align/1dofA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-9974/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dofA/nostruct-align/1dofA.t2k-w0.5.mod (nostruct-align/1dofA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dofA/nostruct-align/1dofA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.083887
/projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t2k-w0.5.mod(21):  Reading nostruct-align/1spgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-9347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t2k-w0.5.mod (nostruct-align/1spgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.055883
/projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t2k-w0.5.mod(21):  Reading nostruct-align/1spgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-7056/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t2k-w0.5.mod (nostruct-align/1spgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.319885
/projects/compbio/experiments/models.97/pdb/1i/1ijvA/nostruct-align/1ijvA.t2k-w0.5.mod(22):  Reading nostruct-align/1ijvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1620/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijvA/nostruct-align/1ijvA.t2k-w0.5.mod (nostruct-align/1ijvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijvA/nostruct-align/1ijvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.464890
/projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t2k-w0.5.mod(21):  Reading nostruct-align/1b5fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-5879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t2k-w0.5.mod (nostruct-align/1b5fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.805851
/projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k-w0.5.mod(22):  Reading nostruct-align/1f4pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11983/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k-w0.5.mod (nostruct-align/1f4pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f4pA/nostruct-align/1f4pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.888905
/projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t2k-w0.5.mod(21):  Reading nostruct-align/1dvpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26779/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t2k-w0.5.mod (nostruct-align/1dvpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.005856
/projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t2k-w0.5.mod(21):  Reading nostruct-align/1b5fB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-25336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t2k-w0.5.mod (nostruct-align/1b5fB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.116907
/projects/compbio/experiments/models.97/pdb/1h/1hw8A/nostruct-align/1hw8A.t2k-w0.5.mod(22):  Reading nostruct-align/1hw8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11186/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hw8A/nostruct-align/1hw8A.t2k-w0.5.mod (nostruct-align/1hw8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hw8A/nostruct-align/1hw8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.017870
/projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-w0.5.mod(22):  Reading nostruct-align/1lucA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-w0.5.mod (nostruct-align/1lucA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.237877
/projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t2k-w0.5.mod(22):  Reading nostruct-align/1c1lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4556/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t2k-w0.5.mod (nostruct-align/1c1lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.688873
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Reading nostruct-align/1lucB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod (nostruct-align/1lucB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.518864
/projects/compbio/experiments/models.97/pdb/1g/1g24A/nostruct-align/1g24A.t2k-w0.5.mod(21):  Reading nostruct-align/1g24A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-25864/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g24A/nostruct-align/1g24A.t2k-w0.5.mod (nostruct-align/1g24A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g24A/nostruct-align/1g24A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.890907
/projects/compbio/experiments/models.97/pdb/1q/1qpsA/nostruct-align/1qpsA.t2k-w0.5.mod(21):  Reading nostruct-align/1qpsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-535/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpsA/nostruct-align/1qpsA.t2k-w0.5.mod (nostruct-align/1qpsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpsA/nostruct-align/1qpsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.442894
/projects/compbio/experiments/models.97/pdb/1n/1nra/nostruct-align/1nra.t2k-w0.5.mod(21):  Reading nostruct-align/1nra.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24884/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nra/nostruct-align/1nra.t2k-w0.5.mod (nostruct-align/1nra.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nra/nostruct-align/1nra.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.018867
/projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t2k-w0.5.mod(21):  Reading nostruct-align/1ghj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-25595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t2k-w0.5.mod (nostruct-align/1ghj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.731909
/projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t2k-w0.5.mod(21):  Reading nostruct-align/1ghr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t2k-w0.5.mod (nostruct-align/1ghr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.511873
/projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t2k-w0.5.mod(21):  Reading nostruct-align/1a36A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-31464/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t2k-w0.5.mod (nostruct-align/1a36A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.551863
/projects/compbio/experiments/models.97/pdb/1e/1e1aA/nostruct-align/1e1aA.t2k-w0.5.mod(22):  Reading nostruct-align/1e1aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1aA/nostruct-align/1e1aA.t2k-w0.5.mod (nostruct-align/1e1aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e1aA/nostruct-align/1e1aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.675894
/projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ja1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-27623/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-w0.5.mod (nostruct-align/1ja1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1ja1A/nostruct-align/1ja1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.273899
/projects/compbio/experiments/models.97/pdb/1s/1sphA/nostruct-align/1sphA.t2k-w0.5.mod(21):  Reading nostruct-align/1sphA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sphA/nostruct-align/1sphA.t2k-w0.5.mod (nostruct-align/1sphA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sphA/nostruct-align/1sphA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.421902
/projects/compbio/experiments/models.97/pdb/1f/1f4qA/nostruct-align/1f4qA.t2k-w0.5.mod(21):  Reading nostruct-align/1f4qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-21941/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4qA/nostruct-align/1f4qA.t2k-w0.5.mod (nostruct-align/1f4qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f4qA/nostruct-align/1f4qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.363890
/projects/compbio/experiments/models.97/pdb/1g/1gib/nostruct-align/1gib.t2k-w0.5.mod(22):  Reading nostruct-align/1gib.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14022/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gib/nostruct-align/1gib.t2k-w0.5.mod (nostruct-align/1gib.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gib/nostruct-align/1gib.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.422861
/projects/compbio/experiments/models.97/pdb/2r/2ran/nostruct-align/2ran.t2k-w0.5.mod(22):  Reading nostruct-align/2ran.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23866/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2ran/nostruct-align/2ran.t2k-w0.5.mod (nostruct-align/2ran.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2ran/nostruct-align/2ran.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.944880
/projects/compbio/experiments/models.97/pdb/1g/1ge7A/nostruct-align/1ge7A.t2k-w0.5.mod(21):  Reading nostruct-align/1ge7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25539/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ge7A/nostruct-align/1ge7A.t2k-w0.5.mod (nostruct-align/1ge7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ge7A/nostruct-align/1ge7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.412878
/projects/compbio/experiments/models.97/pdb/1g/1gcyA/nostruct-align/1gcyA.t2k-w0.5.mod(22):  Reading nostruct-align/1gcyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12537/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gcyA/nostruct-align/1gcyA.t2k-w0.5.mod (nostruct-align/1gcyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gcyA/nostruct-align/1gcyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.705868
/projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t2k-w0.5.mod(22):  Reading nostruct-align/1repC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t2k-w0.5.mod (nostruct-align/1repC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.417883
/projects/compbio/experiments/models.97/pdb/1g/1g25A/nostruct-align/1g25A.t2k-w0.5.mod(21):  Reading nostruct-align/1g25A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15091/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g25A/nostruct-align/1g25A.t2k-w0.5.mod (nostruct-align/1g25A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g25A/nostruct-align/1g25A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.861870
/projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t2k-w0.5.mod(21):  Reading nostruct-align/1db3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t2k-w0.5.mod (nostruct-align/1db3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.934906
/projects/compbio/experiments/models.97/pdb/1c/1cm7A/nostruct-align/1cm7A.t2k-w0.5.mod(22):  Reading nostruct-align/1cm7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19234/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cm7A/nostruct-align/1cm7A.t2k-w0.5.mod (nostruct-align/1cm7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cm7A/nostruct-align/1cm7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.766911
/projects/compbio/experiments/models.97/pdb/1a/1azwA/nostruct-align/1azwA.t2k-w0.5.mod(22):  Reading nostruct-align/1azwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azwA/nostruct-align/1azwA.t2k-w0.5.mod (nostruct-align/1azwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azwA/nostruct-align/1azwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.869883
/projects/compbio/experiments/models.97/pdb/1n/1nsf/nostruct-align/1nsf.t2k-w0.5.mod(22):  Reading nostruct-align/1nsf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsf/nostruct-align/1nsf.t2k-w0.5.mod (nostruct-align/1nsf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nsf/nostruct-align/1nsf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.368889
/projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t2k-w0.5.mod(22):  Reading nostruct-align/1nsj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-3991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t2k-w0.5.mod (nostruct-align/1nsj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.300875
/projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t2k-w0.5.mod(21):  Reading nostruct-align/2pkaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-32703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t2k-w0.5.mod (nostruct-align/2pkaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.436907
/projects/compbio/experiments/models.97/pdb/2p/2pkaB/nostruct-align/2pkaB.t2k-w0.5.mod(22):  Reading nostruct-align/2pkaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17278/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pkaB/nostruct-align/2pkaB.t2k-w0.5.mod (nostruct-align/2pkaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pkaB/nostruct-align/2pkaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.439896
/projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t2k-w0.5.mod(21):  Reading nostruct-align/1csbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t2k-w0.5.mod (nostruct-align/1csbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.274895
/projects/compbio/experiments/models.97/pdb/1p/1p1p/nostruct-align/1p1p.t2k-w0.5.mod(22):  Reading nostruct-align/1p1p.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14257/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p1p/nostruct-align/1p1p.t2k-w0.5.mod (nostruct-align/1p1p.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1p1p/nostruct-align/1p1p.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.848909
/projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t2k-w0.5.mod(22):  Reading nostruct-align/2cblA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-2409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t2k-w0.5.mod (nostruct-align/2cblA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.224873
/projects/compbio/experiments/models.97/pdb/1i/1ijxA/nostruct-align/1ijxA.t2k-w0.5.mod(21):  Reading nostruct-align/1ijxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-8231/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijxA/nostruct-align/1ijxA.t2k-w0.5.mod (nostruct-align/1ijxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijxA/nostruct-align/1ijxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.134871
/projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t2k-w0.5.mod(21):  Reading nostruct-align/1bhjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-16946/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t2k-w0.5.mod (nostruct-align/1bhjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.988857
/projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-w0.5.mod(22):  Reading nostruct-align/1fi2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2296/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-w0.5.mod (nostruct-align/1fi2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fi2A/nostruct-align/1fi2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.920872
/projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-w0.5.mod(22):  Reading nostruct-align/1f60A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13958/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-w0.5.mod (nostruct-align/1f60A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f60A/nostruct-align/1f60A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.577879
/projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-w0.5.mod(22):  Reading nostruct-align/1f60B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13992/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-w0.5.mod (nostruct-align/1f60B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f60B/nostruct-align/1f60B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.101896
/projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t2k-w0.5.mod(21):  Reading nostruct-align/1reqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-27237/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t2k-w0.5.mod (nostruct-align/1reqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.499882
/projects/compbio/experiments/models.97/pdb/1g/1ge8A/nostruct-align/1ge8A.t2k-w0.5.mod(21):  Reading nostruct-align/1ge8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28316/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ge8A/nostruct-align/1ge8A.t2k-w0.5.mod (nostruct-align/1ge8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ge8A/nostruct-align/1ge8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.895870
/projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t2k-w0.5.mod(22):  Reading nostruct-align/1reqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22768/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t2k-w0.5.mod (nostruct-align/1reqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.283876
/projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t2k-w0.5.mod(21):  Reading nostruct-align/2cpb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t2k-w0.5.mod (nostruct-align/2cpb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.379898
/projects/compbio/experiments/models.97/pdb/1g/1g26A/nostruct-align/1g26A.t2k-w0.5.mod(21):  Reading nostruct-align/1g26A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29233/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g26A/nostruct-align/1g26A.t2k-w0.5.mod (nostruct-align/1g26A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g26A/nostruct-align/1g26A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.714886
/projects/compbio/experiments/models.97/pdb/1g/1g0xA/nostruct-align/1g0xA.t2k-w0.5.mod(21):  Reading nostruct-align/1g0xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16706/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0xA/nostruct-align/1g0xA.t2k-w0.5.mod (nostruct-align/1g0xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0xA/nostruct-align/1g0xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.847906
/projects/compbio/experiments/models.97/pdb/1e/1erxA/nostruct-align/1erxA.t2k-w0.5.mod(21):  Reading nostruct-align/1erxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-20717/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erxA/nostruct-align/1erxA.t2k-w0.5.mod (nostruct-align/1erxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1erxA/nostruct-align/1erxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.559898
/projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t2k-w0.5.mod(21):  Reading nostruct-align/1reqD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-554/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t2k-w0.5.mod (nostruct-align/1reqD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.168896
/projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t2k-w0.5.mod(21):  Reading nostruct-align/2cpl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-14142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t2k-w0.5.mod (nostruct-align/2cpl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.542866
/projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k-w0.5.mod(22):  Reading nostruct-align/1fvgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k-w0.5.mod (nostruct-align/1fvgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvgA/nostruct-align/1fvgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.491861
/projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t2k-w0.5.mod(21):  Reading nostruct-align/2cps.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21102/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t2k-w0.5.mod (nostruct-align/2cps.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.379898
/projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t2k-w0.5.mod(21):  Reading nostruct-align/1ntn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t2k-w0.5.mod (nostruct-align/1ntn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.157888
/projects/compbio/experiments/models.97/pdb/4s/4sbvA/nostruct-align/4sbvA.t2k-w0.5.mod(21):  Reading nostruct-align/4sbvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4s/4sbvA/nostruct-align/4sbvA.t2k-w0.5.mod (nostruct-align/4sbvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4s/4sbvA/nostruct-align/4sbvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.919895
/projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-w0.5.mod(22):  Reading nostruct-align/1hp1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-w0.5.mod (nostruct-align/1hp1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hp1A/nostruct-align/1hp1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.651880
/projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t2k-w0.5.mod(21):  Reading nostruct-align/1ntr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t2k-w0.5.mod (nostruct-align/1ntr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.815853
/projects/compbio/experiments/models.97/pdb/1i/1iraX/nostruct-align/1iraX.t2k-w0.5.mod(21):  Reading nostruct-align/1iraX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iraX/nostruct-align/1iraX.t2k-w0.5.mod (nostruct-align/1iraX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iraX/nostruct-align/1iraX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.848871
/projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-w0.5.mod(22):  Reading nostruct-align/1ijyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-w0.5.mod (nostruct-align/1ijyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ijyA/nostruct-align/1ijyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.037893
/projects/compbio/experiments/models.97/pdb/1i/1i7wA/nostruct-align/1i7wA.t2k-w0.5.mod(21):  Reading nostruct-align/1i7wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-28609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7wA/nostruct-align/1i7wA.t2k-w0.5.mod (nostruct-align/1i7wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7wA/nostruct-align/1i7wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.931890
/projects/compbio/experiments/models.97/pdb/1i/1i7wB/nostruct-align/1i7wB.t2k-w0.5.mod(22):  Reading nostruct-align/1i7wB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11864/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7wB/nostruct-align/1i7wB.t2k-w0.5.mod (nostruct-align/1i7wB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7wB/nostruct-align/1i7wB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.300892
/projects/compbio/experiments/models.97/pdb/1f/1f61A/nostruct-align/1f61A.t2k-w0.5.mod(21):  Reading nostruct-align/1f61A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f61A/nostruct-align/1f61A.t2k-w0.5.mod (nostruct-align/1f61A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f61A/nostruct-align/1f61A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.082884
/projects/compbio/experiments/models.97/pdb/1e/1et7A/nostruct-align/1et7A.t2k-w0.5.mod(21):  Reading nostruct-align/1et7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-1275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et7A/nostruct-align/1et7A.t2k-w0.5.mod (nostruct-align/1et7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1et7A/nostruct-align/1et7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.930910
/projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t2k-w0.5.mod(22):  Reading nostruct-align/1bouA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31635/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t2k-w0.5.mod (nostruct-align/1bouA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.857853
/projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t2k-w0.5.mod(22):  Reading nostruct-align/1bouB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-27573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t2k-w0.5.mod (nostruct-align/1bouB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.808895
/projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t2k-w0.5.mod(21):  Reading nostruct-align/1bq3B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-881/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t2k-w0.5.mod (nostruct-align/1bq3B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.650877
/projects/compbio/experiments/models.97/pdb/1q/1qr4A/nostruct-align/1qr4A.t2k-w0.5.mod(21):  Reading nostruct-align/1qr4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-32339/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr4A/nostruct-align/1qr4A.t2k-w0.5.mod (nostruct-align/1qr4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qr4A/nostruct-align/1qr4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.397884
/projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t2k-w0.5.mod(21):  Reading nostruct-align/1qr4B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-5595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t2k-w0.5.mod (nostruct-align/1qr4B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.192852
/projects/compbio/experiments/models.97/pdb/1c/1cm9A/nostruct-align/1cm9A.t2k-w0.5.mod(22):  Reading nostruct-align/1cm9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cm9A/nostruct-align/1cm9A.t2k-w0.5.mod (nostruct-align/1cm9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cm9A/nostruct-align/1cm9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.577904
/projects/compbio/experiments/models.97/pdb/3t/3thiA/nostruct-align/3thiA.t2k-w0.5.mod(22):  Reading nostruct-align/3thiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20066/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3t/3thiA/nostruct-align/3thiA.t2k-w0.5.mod (nostruct-align/3thiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3t/3thiA/nostruct-align/3thiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.736887
/projects/compbio/experiments/models.97/pdb/1g/1g0yI/nostruct-align/1g0yI.t2k-w0.5.mod(22):  Reading nostruct-align/1g0yI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g0yI/nostruct-align/1g0yI.t2k-w0.5.mod (nostruct-align/1g0yI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g0yI/nostruct-align/1g0yI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.607876
/projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t2k-w0.5.mod(21):  Reading nostruct-align/1gks.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-7783/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t2k-w0.5.mod (nostruct-align/1gks.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.095850
/projects/compbio/experiments/models.97/pdb/1i/1icpA/nostruct-align/1icpA.t2k-w0.5.mod(21):  Reading nostruct-align/1icpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-32362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icpA/nostruct-align/1icpA.t2k-w0.5.mod (nostruct-align/1icpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1icpA/nostruct-align/1icpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.009890
/projects/compbio/experiments/models.97/pdb/1e/1e1dA/nostruct-align/1e1dA.t2k-w0.5.mod(22):  Reading nostruct-align/1e1dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-19664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1dA/nostruct-align/1e1dA.t2k-w0.5.mod (nostruct-align/1e1dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e1dA/nostruct-align/1e1dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.212860
/projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t2k-w0.5.mod(21):  Reading nostruct-align/1babA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21589/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t2k-w0.5.mod (nostruct-align/1babA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.088898
/projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t2k-w0.5.mod(21):  Reading nostruct-align/1babB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19834/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t2k-w0.5.mod (nostruct-align/1babB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.281908
/projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t2k-w0.5.mod(21):  Reading nostruct-align/1gky.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-28530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t2k-w0.5.mod (nostruct-align/1gky.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.511896
/projects/compbio/experiments/models.97/pdb/1i/1il8A/nostruct-align/1il8A.t2k-w0.5.mod(21):  Reading nostruct-align/1il8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-13595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1il8A/nostruct-align/1il8A.t2k-w0.5.mod (nostruct-align/1il8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1il8A/nostruct-align/1il8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.501892
/projects/compbio/experiments/models.97/pdb/1c/1cznA/nostruct-align/1cznA.t2k-w0.5.mod(21):  Reading nostruct-align/1cznA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cznA/nostruct-align/1cznA.t2k-w0.5.mod (nostruct-align/1cznA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cznA/nostruct-align/1cznA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.538898
/projects/compbio/experiments/models.97/pdb/1i/1i7xB/nostruct-align/1i7xB.t2k-w0.5.mod(21):  Reading nostruct-align/1i7xB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-16456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i7xB/nostruct-align/1i7xB.t2k-w0.5.mod (nostruct-align/1i7xB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i7xB/nostruct-align/1i7xB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.631863
/projects/compbio/experiments/models.97/pdb/1f/1fi4A/nostruct-align/1fi4A.t2k-w0.5.mod(22):  Reading nostruct-align/1fi4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-5977/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fi4A/nostruct-align/1fi4A.t2k-w0.5.mod (nostruct-align/1fi4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fi4A/nostruct-align/1fi4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.950851
/projects/compbio/experiments/models.97/pdb/1f/1f62A/nostruct-align/1f62A.t2k-w0.5.mod(21):  Reading nostruct-align/1f62A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-21663/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f62A/nostruct-align/1f62A.t2k-w0.5.mod (nostruct-align/1f62A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f62A/nostruct-align/1f62A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.501892
/projects/compbio/experiments/models.97/pdb/1f/1f4tA/nostruct-align/1f4tA.t2k-w0.5.mod(21):  Reading nostruct-align/1f4tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-21371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f4tA/nostruct-align/1f4tA.t2k-w0.5.mod (nostruct-align/1f4tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f4tA/nostruct-align/1f4tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.886898
/projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t2k-w0.5.mod(22):  Reading nostruct-align/1swuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t2k-w0.5.mod (nostruct-align/1swuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.079905
/projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t2k-w0.5.mod(21):  Reading nostruct-align/1nfiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30778/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t2k-w0.5.mod (nostruct-align/1nfiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.484869
/projects/compbio/experiments/models.97/pdb/1e/1erzA/nostruct-align/1erzA.t2k-w0.5.mod(22):  Reading nostruct-align/1erzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14324/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1erzA/nostruct-align/1erzA.t2k-w0.5.mod (nostruct-align/1erzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1erzA/nostruct-align/1erzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.003853
/projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t2k-w0.5.mod(22):  Reading nostruct-align/1nfiE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28777/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t2k-w0.5.mod (nostruct-align/1nfiE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.680901
/projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t2k-w0.5.mod(22):  Reading nostruct-align/2crd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-9191/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t2k-w0.5.mod (nostruct-align/2crd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.248896
/projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t2k-w0.5.mod(21):  Reading nostruct-align/1sayA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-19523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t2k-w0.5.mod (nostruct-align/1sayA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.650885
/projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t2k-w0.5.mod(21):  Reading nostruct-align/1bovA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-13041/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t2k-w0.5.mod (nostruct-align/1bovA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.437904
/projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t2k-w0.5.mod(21):  Reading nostruct-align/1glm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31149/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t2k-w0.5.mod (nostruct-align/1glm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.028889
/projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t2k-w0.5.mod(21):  Reading nostruct-align/1gln.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-17194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t2k-w0.5.mod (nostruct-align/1gln.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.746893
/projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t2k-w0.5.mod(22):  Reading nostruct-align/1c8zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12883/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t2k-w0.5.mod (nostruct-align/1c8zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.416901
/projects/compbio/experiments/models.97/pdb/2c/2cro/nostruct-align/2cro.t2k-w0.5.mod(22):  Reading nostruct-align/2cro.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27989/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cro/nostruct-align/2cro.t2k-w0.5.mod (nostruct-align/2cro.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cro/nostruct-align/2cro.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.236895
/projects/compbio/experiments/models.97/pdb/1f/1fviA/nostruct-align/1fviA.t2k-w0.5.mod(22):  Reading nostruct-align/1fviA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24114/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fviA/nostruct-align/1fviA.t2k-w0.5.mod (nostruct-align/1fviA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fviA/nostruct-align/1fviA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.255861
/projects/compbio/experiments/models.97/pdb/1g/1g291/nostruct-align/1g291.t2k-w0.5.mod(21):  Reading nostruct-align/1g291.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-12829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g291/nostruct-align/1g291.t2k-w0.5.mod (nostruct-align/1g291.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g291/nostruct-align/1g291.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.148911
/projects/compbio/experiments/models.97/pdb/1r/1rtfB/nostruct-align/1rtfB.t2k-w0.5.mod(21):  Reading nostruct-align/1rtfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rtfB/nostruct-align/1rtfB.t2k-w0.5.mod (nostruct-align/1rtfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rtfB/nostruct-align/1rtfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.142866
/projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t2k-w0.5.mod(22):  Reading nostruct-align/2reb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15368/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t2k-w0.5.mod (nostruct-align/2reb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.077868
/projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t2k-w0.5.mod(21):  Reading nostruct-align/1cseE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-20427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t2k-w0.5.mod (nostruct-align/1cseE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.928875
/projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t2k-w0.5.mod(21):  Reading nostruct-align/1dokA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-26169/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t2k-w0.5.mod (nostruct-align/1dokA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.621901
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Reading nostruct-align/1hnuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -36.519886
/projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k-w0.5.mod(22):  Reading nostruct-align/1cseI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19959/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k-w0.5.mod (nostruct-align/1cseI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.030851
/projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-w0.5.mod(22):  Reading nostruct-align/1ekqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-w0.5.mod (nostruct-align/1ekqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekqA/nostruct-align/1ekqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.381893
/projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t2k-w0.5.mod(22):  Reading nostruct-align/1cf1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8605/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t2k-w0.5.mod (nostruct-align/1cf1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.117861
/projects/compbio/experiments/models.97/pdb/1k/1kcfA/nostruct-align/1kcfA.t2k-w0.5.mod(22):  Reading nostruct-align/1kcfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22233/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcfA/nostruct-align/1kcfA.t2k-w0.5.mod (nostruct-align/1kcfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kcfA/nostruct-align/1kcfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.692863
/projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t2k-w0.5.mod(21):  Reading nostruct-align/1et9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-24824/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t2k-w0.5.mod (nostruct-align/1et9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.504856
/projects/compbio/experiments/models.97/pdb/1k/1k0dA/nostruct-align/1k0dA.t2k-w0.5.mod(22):  Reading nostruct-align/1k0dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17800/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0dA/nostruct-align/1k0dA.t2k-w0.5.mod (nostruct-align/1k0dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k0dA/nostruct-align/1k0dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.188854
/projects/compbio/experiments/models.97/pdb/1i/1irdA/nostruct-align/1irdA.t2k-w0.5.mod(22):  Reading nostruct-align/1irdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7149/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irdA/nostruct-align/1irdA.t2k-w0.5.mod (nostruct-align/1irdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irdA/nostruct-align/1irdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.071852
/projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t2k-w0.5.mod(21):  Reading nostruct-align/1obpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-28644/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t2k-w0.5.mod (nostruct-align/1obpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.908892
/projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-w0.5.mod(22):  Reading nostruct-align/1irdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-w0.5.mod (nostruct-align/1irdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irdB/nostruct-align/1irdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.666859
/projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t2k-w0.5.mod(22):  Reading nostruct-align/1bowA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t2k-w0.5.mod (nostruct-align/1bowA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.507864
/projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t2k-w0.5.mod(22):  Reading nostruct-align/1qr6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-6863/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t2k-w0.5.mod (nostruct-align/1qr6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.172903
/projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t2k-w0.5.mod(22):  Reading nostruct-align/1qpxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t2k-w0.5.mod (nostruct-align/1qpxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.287907
/projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t2k-w0.5.mod(21):  Reading nostruct-align/1nmtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-11727/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t2k-w0.5.mod (nostruct-align/1nmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.328869
/projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t2k-w0.5.mod(21):  Reading nostruct-align/1edhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23871/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t2k-w0.5.mod (nostruct-align/1edhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.935883
/projects/compbio/experiments/models.97/pdb/1i/1icrA/nostruct-align/1icrA.t2k-w0.5.mod(21):  Reading nostruct-align/1icrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-21706/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1icrA/nostruct-align/1icrA.t2k-w0.5.mod (nostruct-align/1icrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1icrA/nostruct-align/1icrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.976894
/projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t2k-w0.5.mod(21):  Reading nostruct-align/1qbeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t2k-w0.5.mod (nostruct-align/1qbeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.920883
/projects/compbio/experiments/models.97/pdb/2s/2sniI/nostruct-align/2sniI.t2k-w0.5.mod(21):  Reading nostruct-align/2sniI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-5608/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sniI/nostruct-align/2sniI.t2k-w0.5.mod (nostruct-align/2sniI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sniI/nostruct-align/2sniI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.890911
/projects/compbio/experiments/models.97/pdb/1h/1hp4A/nostruct-align/1hp4A.t2k-w0.5.mod(21):  Reading nostruct-align/1hp4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp4A/nostruct-align/1hp4A.t2k-w0.5.mod (nostruct-align/1hp4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hp4A/nostruct-align/1hp4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.833900
/projects/compbio/experiments/models.97/pdb/1e/1ekrA/nostruct-align/1ekrA.t2k-w0.5.mod(22):  Reading nostruct-align/1ekrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26064/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekrA/nostruct-align/1ekrA.t2k-w0.5.mod (nostruct-align/1ekrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekrA/nostruct-align/1ekrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.353909
/projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-w0.5.mod(22):  Reading nostruct-align/1czpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-29608/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-w0.5.mod (nostruct-align/1czpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.106876
/projects/compbio/experiments/models.97/pdb/1e/1e8pA/nostruct-align/1e8pA.t2k-w0.5.mod(21):  Reading nostruct-align/1e8pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-18621/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8pA/nostruct-align/1e8pA.t2k-w0.5.mod (nostruct-align/1e8pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8pA/nostruct-align/1e8pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.641863
/projects/compbio/experiments/models.97/pdb/1f/1fgxA/nostruct-align/1fgxA.t2k-w0.5.mod(21):  Reading nostruct-align/1fgxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23802/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgxA/nostruct-align/1fgxA.t2k-w0.5.mod (nostruct-align/1fgxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fgxA/nostruct-align/1fgxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.943905
/projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t2k-w0.5.mod(21):  Reading nostruct-align/1nfkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-13399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t2k-w0.5.mod (nostruct-align/1nfkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.140881
/projects/compbio/experiments/models.97/pdb/1c/1cdtA/nostruct-align/1cdtA.t2k-w0.5.mod(21):  Reading nostruct-align/1cdtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdtA/nostruct-align/1cdtA.t2k-w0.5.mod (nostruct-align/1cdtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdtA/nostruct-align/1cdtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.953897
/projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t2k-w0.5.mod(21):  Reading nostruct-align/1gnd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-13409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t2k-w0.5.mod (nostruct-align/1gnd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.573898
/projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t2k-w0.5.mod(21):  Reading nostruct-align/3nll.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-9048/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t2k-w0.5.mod (nostruct-align/3nll.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.680866
/projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t2k-w0.5.mod(21):  Reading nostruct-align/2ctb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-26481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t2k-w0.5.mod (nostruct-align/2ctb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.001879
/projects/compbio/experiments/models.97/pdb/1g/1gnf/nostruct-align/1gnf.t2k-w0.5.mod(21):  Reading nostruct-align/1gnf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-31498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnf/nostruct-align/1gnf.t2k-w0.5.mod (nostruct-align/1gnf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gnf/nostruct-align/1gnf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.485891
/projects/compbio/experiments/models.97/pdb/1k/1k0eA/nostruct-align/1k0eA.t2k-w0.5.mod(22):  Reading nostruct-align/1k0eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6199/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0eA/nostruct-align/1k0eA.t2k-w0.5.mod (nostruct-align/1k0eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k0eA/nostruct-align/1k0eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.542883
/projects/compbio/experiments/models.97/pdb/2e/2e2c/nostruct-align/2e2c.t2k-w0.5.mod(21):  Reading nostruct-align/2e2c.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29614/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2e2c/nostruct-align/2e2c.t2k-w0.5.mod (nostruct-align/2e2c.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2e2c/nostruct-align/2e2c.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.836855
/projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t2k-w0.5.mod(22):  Reading nostruct-align/2ctc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22565/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t2k-w0.5.mod (nostruct-align/2ctc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.885880
/projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t2k-w0.5.mod(21):  Reading nostruct-align/1qr7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-31001/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t2k-w0.5.mod (nostruct-align/1qr7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.867853
/projects/compbio/experiments/models.97/pdb/1f/1foaA/nostruct-align/1foaA.t2k-w0.5.mod(21):  Reading nostruct-align/1foaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-2756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1foaA/nostruct-align/1foaA.t2k-w0.5.mod (nostruct-align/1foaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1foaA/nostruct-align/1foaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.481871
/projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t2k-w0.5.mod(22):  Reading nostruct-align/1nxb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t2k-w0.5.mod (nostruct-align/1nxb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.154863
/projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-w0.5.mod (nostruct-align/1g8eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8eA/nostruct-align/1g8eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.525873
/projects/compbio/experiments/models.97/pdb/1e/1ezeA/nostruct-align/1ezeA.t2k-w0.5.mod(21):  Reading nostruct-align/1ezeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-7649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezeA/nostruct-align/1ezeA.t2k-w0.5.mod (nostruct-align/1ezeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezeA/nostruct-align/1ezeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.243860
/projects/compbio/experiments/models.97/pdb/1c/1cf2O/nostruct-align/1cf2O.t2k-w0.5.mod(21):  Reading nostruct-align/1cf2O.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29726/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf2O/nostruct-align/1cf2O.t2k-w0.5.mod (nostruct-align/1cf2O.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cf2O/nostruct-align/1cf2O.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.142872
/projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t2k-w0.5.mod(21):  Reading nostruct-align/3gcb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-14413/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t2k-w0.5.mod (nostruct-align/3gcb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.308895
/projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-w0.5.mod(22):  Reading nostruct-align/1fvkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10468/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-w0.5.mod (nostruct-align/1fvkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.553856
/projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t2k-w0.5.mod(21):  Reading nostruct-align/3nn9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-5729/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t2k-w0.5.mod (nostruct-align/3nn9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.636896
/projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t2k-w0.5.mod(21):  Reading nostruct-align/1csgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-27862/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t2k-w0.5.mod (nostruct-align/1csgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.579905
/projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t2k-w0.5.mod(21):  Reading nostruct-align/1rthA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24346/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t2k-w0.5.mod (nostruct-align/1rthA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.366892
/projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ks9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7605/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-w0.5.mod (nostruct-align/1ks9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ks9A/nostruct-align/1ks9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.196880
/projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-w0.5.mod(22):  Reading nostruct-align/1vsrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13421/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-w0.5.mod (nostruct-align/1vsrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.303864
/projects/compbio/experiments/models.97/pdb/1q/1qbfA/nostruct-align/1qbfA.t2k-w0.5.mod(21):  Reading nostruct-align/1qbfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-24438/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbfA/nostruct-align/1qbfA.t2k-w0.5.mod (nostruct-align/1qbfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbfA/nostruct-align/1qbfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.114910
/projects/compbio/experiments/models.97/pdb/1h/1hp5A/nostruct-align/1hp5A.t2k-w0.5.mod(21):  Reading nostruct-align/1hp5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-13718/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp5A/nostruct-align/1hp5A.t2k-w0.5.mod (nostruct-align/1hp5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hp5A/nostruct-align/1hp5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.486906
/projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t2k-w0.5.mod(21):  Reading nostruct-align/2rgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1592/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t2k-w0.5.mod (nostruct-align/2rgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.882881
/projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t2k-w0.5.mod(21):  Reading nostruct-align/1czqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t2k-w0.5.mod (nostruct-align/1czqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.203899
/projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t2k-w0.5.mod(21):  Reading nostruct-align/1qipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-22873/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t2k-w0.5.mod (nostruct-align/1qipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.946907
/projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k-w0.5.mod(22):  Reading nostruct-align/1fgyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20790/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k-w0.5.mod (nostruct-align/1fgyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fgyA/nostruct-align/1fgyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.677891
/projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t2k-w0.5.mod(21):  Reading nostruct-align/2er7E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-26315/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t2k-w0.5.mod (nostruct-align/2er7E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.543873
/projects/compbio/experiments/models.97/pdb/1a/1au1A/nostruct-align/1au1A.t2k-w0.5.mod(21):  Reading nostruct-align/1au1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15451/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1au1A/nostruct-align/1au1A.t2k-w0.5.mod (nostruct-align/1au1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1au1A/nostruct-align/1au1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.763903
/projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t2k-w0.5.mod(21):  Reading nostruct-align/1gof.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-28998/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t2k-w0.5.mod (nostruct-align/1gof.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.669870
/projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t2k-w0.5.mod(22):  Reading nostruct-align/1xdtR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t2k-w0.5.mod (nostruct-align/1xdtR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.558910
/projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t2k-w0.5.mod(21):  Reading nostruct-align/1goh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5919/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t2k-w0.5.mod (nostruct-align/1goh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.943876
/projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t2k-w0.5.mod(21):  Reading nostruct-align/1qpzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29833/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t2k-w0.5.mod (nostruct-align/1qpzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.067881
/projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t2k-w0.5.mod(21):  Reading nostruct-align/1dx5I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-29066/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t2k-w0.5.mod (nostruct-align/1dx5I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.800907
/projects/compbio/experiments/models.97/pdb/1g/1g8fA/nostruct-align/1g8fA.t2k-w0.5.mod(21):  Reading nostruct-align/1g8fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-26808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8fA/nostruct-align/1g8fA.t2k-w0.5.mod (nostruct-align/1g8fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8fA/nostruct-align/1g8fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.571907
/projects/compbio/experiments/models.97/pdb/1e/1ezfA/nostruct-align/1ezfA.t2k-w0.5.mod(22):  Reading nostruct-align/1ezfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4970/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezfA/nostruct-align/1ezfA.t2k-w0.5.mod (nostruct-align/1ezfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezfA/nostruct-align/1ezfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.272869
/projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-w0.5.mod(22):  Reading nostruct-align/1i0rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-w0.5.mod (nostruct-align/1i0rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0rA/nostruct-align/1i0rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.039907
/projects/compbio/experiments/models.97/pdb/2g/2gwxA/nostruct-align/2gwxA.t2k-w0.5.mod(21):  Reading nostruct-align/2gwxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31780/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gwxA/nostruct-align/2gwxA.t2k-w0.5.mod (nostruct-align/2gwxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gwxA/nostruct-align/2gwxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.784866
/projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t2k-w0.5.mod(22):  Reading nostruct-align/1gox.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3736/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t2k-w0.5.mod (nostruct-align/1gox.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.563892
/projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k-w0.5.mod(21):  Reading nostruct-align/8tlnE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-28672/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k-w0.5.mod (nostruct-align/8tlnE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.573860
/projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t2k-w0.5.mod(21):  Reading nostruct-align/2rhe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17631/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t2k-w0.5.mod (nostruct-align/2rhe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.706890
/projects/compbio/experiments/models.97/pdb/1w/1wwaX/nostruct-align/1wwaX.t2k-w0.5.mod(21):  Reading nostruct-align/1wwaX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-32515/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wwaX/nostruct-align/1wwaX.t2k-w0.5.mod (nostruct-align/1wwaX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wwaX/nostruct-align/1wwaX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.725901
/projects/compbio/experiments/models.97/pdb/1e/1ektA/nostruct-align/1ektA.t2k-w0.5.mod(21):  Reading nostruct-align/1ektA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ektA/nostruct-align/1ektA.t2k-w0.5.mod (nostruct-align/1ektA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ektA/nostruct-align/1ektA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.027866
/projects/compbio/experiments/models.97/pdb/1e/1em2A/nostruct-align/1em2A.t2k-w0.5.mod(22):  Reading nostruct-align/1em2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1585/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1em2A/nostruct-align/1em2A.t2k-w0.5.mod (nostruct-align/1em2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1em2A/nostruct-align/1em2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.073912
/projects/compbio/experiments/models.97/pdb/1e/1e8rA/nostruct-align/1e8rA.t2k-w0.5.mod(21):  Reading nostruct-align/1e8rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8rA/nostruct-align/1e8rA.t2k-w0.5.mod (nostruct-align/1e8rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8rA/nostruct-align/1e8rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.657907
/projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t2k-w0.5.mod(21):  Reading nostruct-align/1gpb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-32372/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t2k-w0.5.mod (nostruct-align/1gpb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.858870
/projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t2k-w0.5.mod(22):  Reading nostruct-align/1gpc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29680/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t2k-w0.5.mod (nostruct-align/1gpc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.692858
/projects/compbio/experiments/models.97/pdb/1f/1f66C/nostruct-align/1f66C.t2k-w0.5.mod(21):  Reading nostruct-align/1f66C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-31917/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f66C/nostruct-align/1f66C.t2k-w0.5.mod (nostruct-align/1f66C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f66C/nostruct-align/1f66C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.791882
/projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t2k-w0.5.mod(21):  Reading nostruct-align/1cf4B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-32602/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t2k-w0.5.mod (nostruct-align/1cf4B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.888859
/projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-w0.5.mod(22):  Reading nostruct-align/4ubpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-w0.5.mod (nostruct-align/4ubpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.259911
/projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-w0.5.mod(22):  Reading nostruct-align/4ubpB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5289/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-w0.5.mod (nostruct-align/4ubpB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.920893
/projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k-w0.5.mod(22):  Reading nostruct-align/4ubpC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29402/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k-w0.5.mod (nostruct-align/4ubpC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.941885
/projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t2k-w0.5.mod(21):  Reading nostruct-align/1gpl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-23344/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t2k-w0.5.mod (nostruct-align/1gpl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.739853
/projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-w0.5.mod(22):  Reading nostruct-align/1ezgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4075/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-w0.5.mod (nostruct-align/1ezgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezgA/nostruct-align/1ezgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.302906
/projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t2k-w0.5.mod(22):  Reading nostruct-align/1gpr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28236/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t2k-w0.5.mod (nostruct-align/1gpr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.336887
/projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t2k-w0.5.mod(21):  Reading nostruct-align/1gps.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17031/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t2k-w0.5.mod (nostruct-align/1gps.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.677887
/projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t2k-w0.5.mod(21):  Reading nostruct-align/1gpt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-17293/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t2k-w0.5.mod (nostruct-align/1gpt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.703875
/projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-w0.5.mod(22):  Reading nostruct-align/1vcc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-w0.5.mod (nostruct-align/1vcc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.382881
/projects/compbio/experiments/models.97/pdb/1i/1i21A/nostruct-align/1i21A.t2k-w0.5.mod(22):  Reading nostruct-align/1i21A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i21A/nostruct-align/1i21A.t2k-w0.5.mod (nostruct-align/1i21A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i21A/nostruct-align/1i21A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.230898
/projects/compbio/experiments/models.97/pdb/1i/1i0sA/nostruct-align/1i0sA.t2k-w0.5.mod(21):  Reading nostruct-align/1i0sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1729/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0sA/nostruct-align/1i0sA.t2k-w0.5.mod (nostruct-align/1i0sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0sA/nostruct-align/1i0sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.011902
/projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t2k-w0.5.mod(21):  Reading nostruct-align/1qbhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t2k-w0.5.mod (nostruct-align/1qbhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.748909
/projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ja9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13875/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-w0.5.mod (nostruct-align/1ja9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1ja9A/nostruct-align/1ja9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.297876
/projects/compbio/experiments/models.97/pdb/1w/1wwbX/nostruct-align/1wwbX.t2k-w0.5.mod(21):  Reading nostruct-align/1wwbX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21714/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wwbX/nostruct-align/1wwbX.t2k-w0.5.mod (nostruct-align/1wwbX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wwbX/nostruct-align/1wwbX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.774902
/projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t2k-w0.5.mod(21):  Reading nostruct-align/1alkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22875/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t2k-w0.5.mod (nostruct-align/1alkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.643877
/projects/compbio/experiments/models.97/pdb/1p/1pmlA/nostruct-align/1pmlA.t2k-w0.5.mod(21):  Reading nostruct-align/1pmlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-23137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmlA/nostruct-align/1pmlA.t2k-w0.5.mod (nostruct-align/1pmlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmlA/nostruct-align/1pmlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.122908
/projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t2k-w0.5.mod(21):  Reading nostruct-align/1czsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-4335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t2k-w0.5.mod (nostruct-align/1czsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.942875
/projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k-w0.5.mod(22):  Reading nostruct-align/1mjhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k-w0.5.mod (nostruct-align/1mjhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.664873
/projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t2k-w0.5.mod(22):  Reading nostruct-align/1mjhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t2k-w0.5.mod (nostruct-align/1mjhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.674860
/projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t2k-w0.5.mod(21):  Reading nostruct-align/1dx7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-10585/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t2k-w0.5.mod (nostruct-align/1dx7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.353886
/projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t2k-w0.5.mod(22):  Reading nostruct-align/4pgaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22600/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t2k-w0.5.mod (nostruct-align/4pgaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.722883
/projects/compbio/experiments/models.97/pdb/1h/1hvbA/nostruct-align/1hvbA.t2k-w0.5.mod(22):  Reading nostruct-align/1hvbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2422/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvbA/nostruct-align/1hvbA.t2k-w0.5.mod (nostruct-align/1hvbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hvbA/nostruct-align/1hvbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.307903
/projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t2k-w0.5.mod(21):  Reading nostruct-align/1cdwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-32071/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t2k-w0.5.mod (nostruct-align/1cdwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.502865
/projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t2k-w0.5.mod(22):  Reading nostruct-align/1wwcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t2k-w0.5.mod (nostruct-align/1wwcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.048910
/projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t2k-w0.5.mod(21):  Reading nostruct-align/1ptvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1896/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t2k-w0.5.mod (nostruct-align/1ptvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.429863
/projects/compbio/experiments/models.97/pdb/1f/1fvnA/nostruct-align/1fvnA.t2k-w0.5.mod(22):  Reading nostruct-align/1fvnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1749/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvnA/nostruct-align/1fvnA.t2k-w0.5.mod (nostruct-align/1fvnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvnA/nostruct-align/1fvnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.212893
/projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t2k-w0.5.mod(21):  Reading nostruct-align/1uwoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-1192/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t2k-w0.5.mod (nostruct-align/1uwoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.495893
/projects/compbio/experiments/models.97/pdb/1c/1csjA/nostruct-align/1csjA.t2k-w0.5.mod(22):  Reading nostruct-align/1csjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-12435/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csjA/nostruct-align/1csjA.t2k-w0.5.mod (nostruct-align/1csjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1csjA/nostruct-align/1csjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.538864
/projects/compbio/experiments/models.97/pdb/1q/1qbiA/nostruct-align/1qbiA.t2k-w0.5.mod(21):  Reading nostruct-align/1qbiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-4449/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbiA/nostruct-align/1qbiA.t2k-w0.5.mod (nostruct-align/1qbiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbiA/nostruct-align/1qbiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.814865
/projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t2k-w0.5.mod(21):  Reading nostruct-align/1i16.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-2642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t2k-w0.5.mod (nostruct-align/1i16.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.476862
/projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t2k-w0.5.mod(21):  Reading nostruct-align/2cy3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-6136/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t2k-w0.5.mod (nostruct-align/2cy3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.559904
/projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t2k-w0.5.mod(21):  Reading nostruct-align/1cztA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t2k-w0.5.mod (nostruct-align/1cztA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.233883
/projects/compbio/experiments/models.97/pdb/1e/1e8tA/nostruct-align/1e8tA.t2k-w0.5.mod(21):  Reading nostruct-align/1e8tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-32004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8tA/nostruct-align/1e8tA.t2k-w0.5.mod (nostruct-align/1e8tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8tA/nostruct-align/1e8tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.252869
/projects/compbio/experiments/models.97/pdb/1q/1qisA/nostruct-align/1qisA.t2k-w0.5.mod(21):  Reading nostruct-align/1qisA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-5645/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qisA/nostruct-align/1qisA.t2k-w0.5.mod (nostruct-align/1qisA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qisA/nostruct-align/1qisA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.692905
/projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k-w0.5.mod(22):  Reading nostruct-align/1k0iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k-w0.5.mod (nostruct-align/1k0iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k0iA/nostruct-align/1k0iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.585901
/projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t2k-w0.5.mod(22):  Reading nostruct-align/1grj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14531/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t2k-w0.5.mod (nostruct-align/1grj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.733889
/projects/compbio/experiments/models.97/pdb/1f/1foeA/nostruct-align/1foeA.t2k-w0.5.mod(22):  Reading nostruct-align/1foeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29846/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1foeA/nostruct-align/1foeA.t2k-w0.5.mod (nostruct-align/1foeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1foeA/nostruct-align/1foeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.672871
/projects/compbio/experiments/models.97/pdb/1g/1g8iA/nostruct-align/1g8iA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4232/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8iA/nostruct-align/1g8iA.t2k-w0.5.mod (nostruct-align/1g8iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8iA/nostruct-align/1g8iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.691864
/projects/compbio/experiments/models.97/pdb/1e/1eziA/nostruct-align/1eziA.t2k-w0.5.mod(22):  Reading nostruct-align/1eziA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25307/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eziA/nostruct-align/1eziA.t2k-w0.5.mod (nostruct-align/1eziA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eziA/nostruct-align/1eziA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.165892
/projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t2k-w0.5.mod(21):  Reading nostruct-align/1nubA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-21948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t2k-w0.5.mod (nostruct-align/1nubA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.935900
/projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t2k-w0.5.mod(21):  Reading nostruct-align/1cskA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-6273/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t2k-w0.5.mod (nostruct-align/1cskA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.697861
/projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t2k-w0.5.mod(22):  Reading nostruct-align/1edmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t2k-w0.5.mod (nostruct-align/1edmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.907871
/projects/compbio/experiments/models.97/pdb/1i/1i0uA/nostruct-align/1i0uA.t2k-w0.5.mod(21):  Reading nostruct-align/1i0uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-4985/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0uA/nostruct-align/1i0uA.t2k-w0.5.mod (nostruct-align/1i0uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0uA/nostruct-align/1i0uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.753880
/projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t2k-w0.5.mod(21):  Reading nostruct-align/1qbjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-26648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t2k-w0.5.mod (nostruct-align/1qbjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.938885
/projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t2k-w0.5.mod(21):  Reading nostruct-align/1grx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12524/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t2k-w0.5.mod (nostruct-align/1grx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.249851
/projects/compbio/experiments/models.97/pdb/1e/1e8uA/nostruct-align/1e8uA.t2k-w0.5.mod(22):  Reading nostruct-align/1e8uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3307/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8uA/nostruct-align/1e8uA.t2k-w0.5.mod (nostruct-align/1e8uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8uA/nostruct-align/1e8uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.191851
/projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t2k-w0.5.mod(22):  Reading nostruct-align/1b5qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-29913/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t2k-w0.5.mod (nostruct-align/1b5qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.894890
/projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t2k-w0.5.mod(22):  Reading nostruct-align/1gsa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t2k-w0.5.mod (nostruct-align/1gsa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.455853
/projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t2k-w0.5.mod(21):  Reading nostruct-align/1i1b.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16803/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t2k-w0.5.mod (nostruct-align/1i1b.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.286869
/projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t2k-w0.5.mod(21):  Reading nostruct-align/1cf7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-19859/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t2k-w0.5.mod (nostruct-align/1cf7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.406864
/projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t2k-w0.5.mod(22):  Reading nostruct-align/1cf7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t2k-w0.5.mod (nostruct-align/1cf7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.243893
/projects/compbio/experiments/models.97/pdb/4c/4cms/nostruct-align/4cms.t2k-w0.5.mod(21):  Reading nostruct-align/4cms.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-12641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4c/4cms/nostruct-align/4cms.t2k-w0.5.mod (nostruct-align/4cms.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4c/4cms/nostruct-align/4cms.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.852875
/projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t2k-w0.5.mod(21):  Reading nostruct-align/1rtm1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27395/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t2k-w0.5.mod (nostruct-align/1rtm1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.898890
/projects/compbio/experiments/models.97/pdb/1f/1fofA/nostruct-align/1fofA.t2k-w0.5.mod(21):  Reading nostruct-align/1fofA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7338/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fofA/nostruct-align/1fofA.t2k-w0.5.mod (nostruct-align/1fofA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fofA/nostruct-align/1fofA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.011858
/projects/compbio/experiments/models.97/pdb/1g/1gklA/nostruct-align/1gklA.t2k-w0.5.mod(22):  Reading nostruct-align/1gklA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26255/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gklA/nostruct-align/1gklA.t2k-w0.5.mod (nostruct-align/1gklA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gklA/nostruct-align/1gklA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.671892
/projects/compbio/experiments/models.97/pdb/1g/1g8jA/nostruct-align/1g8jA.t2k-w0.5.mod(21):  Reading nostruct-align/1g8jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-13960/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8jA/nostruct-align/1g8jA.t2k-w0.5.mod (nostruct-align/1g8jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8jA/nostruct-align/1g8jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.156885
/projects/compbio/experiments/models.97/pdb/1e/1ezjA/nostruct-align/1ezjA.t2k-w0.5.mod(22):  Reading nostruct-align/1ezjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19996/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezjA/nostruct-align/1ezjA.t2k-w0.5.mod (nostruct-align/1ezjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezjA/nostruct-align/1ezjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.017874
/projects/compbio/experiments/models.97/pdb/1g/1g8jB/nostruct-align/1g8jB.t2k-w0.5.mod(21):  Reading nostruct-align/1g8jB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19753/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8jB/nostruct-align/1g8jB.t2k-w0.5.mod (nostruct-align/1g8jB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8jB/nostruct-align/1g8jB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.249874
/projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-w0.5.mod(22):  Reading nostruct-align/1k92A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9557/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-w0.5.mod (nostruct-align/1k92A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k92A/nostruct-align/1k92A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.747850
/projects/compbio/experiments/models.97/pdb/1w/1whsA/nostruct-align/1whsA.t2k-w0.5.mod(22):  Reading nostruct-align/1whsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23887/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whsA/nostruct-align/1whsA.t2k-w0.5.mod (nostruct-align/1whsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1whsA/nostruct-align/1whsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.467876
/projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t2k-w0.5.mod(21):  Reading nostruct-align/2cyp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-9615/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t2k-w0.5.mod (nostruct-align/2cyp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.515896
/projects/compbio/experiments/models.97/pdb/1w/1whsB/nostruct-align/1whsB.t2k-w0.5.mod(22):  Reading nostruct-align/1whsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-21699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whsB/nostruct-align/1whsB.t2k-w0.5.mod (nostruct-align/1whsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1whsB/nostruct-align/1whsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.630861
/projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-w0.5.mod(22):  Reading nostruct-align/1i0vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-w0.5.mod (nostruct-align/1i0vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i0vA/nostruct-align/1i0vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.688875
/projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t2k-w0.5.mod(22):  Reading nostruct-align/1qbkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-28001/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t2k-w0.5.mod (nostruct-align/1qbkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.978910
/projects/compbio/experiments/models.97/pdb/1d/1dorA/nostruct-align/1dorA.t2k-w0.5.mod(21):  Reading nostruct-align/1dorA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-4856/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dorA/nostruct-align/1dorA.t2k-w0.5.mod (nostruct-align/1dorA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dorA/nostruct-align/1dorA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.828867
/projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t2k-w0.5.mod(21):  Reading nostruct-align/2kaiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-30674/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t2k-w0.5.mod (nostruct-align/2kaiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.437874
/projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t2k-w0.5.mod(21):  Reading nostruct-align/1bhtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-23129/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t2k-w0.5.mod (nostruct-align/1bhtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.484873
/projects/compbio/experiments/models.97/pdb/1h/1hi0P/nostruct-align/1hi0P.t2k-w0.5.mod(21):  Reading nostruct-align/1hi0P.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9919/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hi0P/nostruct-align/1hi0P.t2k-w0.5.mod (nostruct-align/1hi0P.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hi0P/nostruct-align/1hi0P.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.183861
/projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t2k-w0.5.mod(21):  Reading nostruct-align/1qk3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14464/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t2k-w0.5.mod (nostruct-align/1qk3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.009897
/projects/compbio/experiments/models.97/pdb/1j/1jggA/nostruct-align/1jggA.t2k-w0.5.mod(22):  Reading nostruct-align/1jggA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jggA/nostruct-align/1jggA.t2k-w0.5.mod (nostruct-align/1jggA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jggA/nostruct-align/1jggA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.319872
/projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t2k-w0.5.mod(21):  Reading nostruct-align/1cdzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t2k-w0.5.mod (nostruct-align/1cdzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.989889
/projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t2k-w0.5.mod(21):  Reading nostruct-align/1ttbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18118/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t2k-w0.5.mod (nostruct-align/1ttbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.298891
/projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t2k-w0.5.mod(21):  Reading nostruct-align/1obwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16537/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t2k-w0.5.mod (nostruct-align/1obwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.126865
/projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t2k-w0.5.mod(21):  Reading nostruct-align/2rn2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-17511/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t2k-w0.5.mod (nostruct-align/2rn2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.366898
/projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-w0.5.mod(22):  Reading nostruct-align/1gkmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14746/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-w0.5.mod (nostruct-align/1gkmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gkmA/nostruct-align/1gkmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.297884
/projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-w0.5.mod(22):  Reading nostruct-align/1kjwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-18509/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-w0.5.mod (nostruct-align/1kjwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kjwA/nostruct-align/1kjwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.962870
/projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-7213/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-w0.5.mod (nostruct-align/1g8kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8kA/nostruct-align/1g8kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.530863
/projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k-w0.5.mod(21):  Reading nostruct-align/1g8kB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-24967/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k-w0.5.mod (nostruct-align/1g8kB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8kB/nostruct-align/1g8kB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.987875
/projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t2k-w0.5.mod(22):  Reading nostruct-align/1whtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31472/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t2k-w0.5.mod (nostruct-align/1whtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.315903
/projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t2k-w0.5.mod(22):  Reading nostruct-align/1whtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t2k-w0.5.mod (nostruct-align/1whtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.727903
/projects/compbio/experiments/models.97/pdb/1e/1edoA/nostruct-align/1edoA.t2k-w0.5.mod(21):  Reading nostruct-align/1edoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-27500/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edoA/nostruct-align/1edoA.t2k-w0.5.mod (nostruct-align/1edoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edoA/nostruct-align/1edoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.179869
/projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k-w0.5.mod(22):  Reading nostruct-align/1jw9B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16795/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k-w0.5.mod (nostruct-align/1jw9B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jw9B/nostruct-align/1jw9B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.185902
/projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t2k-w0.5.mod(21):  Reading nostruct-align/1csmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-2179/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t2k-w0.5.mod (nostruct-align/1csmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.312897
/projects/compbio/experiments/models.97/pdb/1i/1i25A/nostruct-align/1i25A.t2k-w0.5.mod(21):  Reading nostruct-align/1i25A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i25A/nostruct-align/1i25A.t2k-w0.5.mod (nostruct-align/1i25A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i25A/nostruct-align/1i25A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.520866
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Reading nostruct-align/1dosA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod (nostruct-align/1dosA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.229860
/projects/compbio/experiments/models.97/pdb/1v/1vgh/nostruct-align/1vgh.t2k-w0.5.mod(21):  Reading nostruct-align/1vgh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vgh/nostruct-align/1vgh.t2k-w0.5.mod (nostruct-align/1vgh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vgh/nostruct-align/1vgh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.979853
/projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t2k-w0.5.mod(22):  Reading nostruct-align/1b71A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5606/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t2k-w0.5.mod (nostruct-align/1b71A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.210873
/projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t2k-w0.5.mod(21):  Reading nostruct-align/1qk4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21230/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t2k-w0.5.mod (nostruct-align/1qk4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.967894
/projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t2k-w0.5.mod(21):  Reading nostruct-align/1cf9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-30787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t2k-w0.5.mod (nostruct-align/1cf9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.790909
/projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t2k-w0.5.mod(21):  Reading nostruct-align/1asyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t2k-w0.5.mod (nostruct-align/1asyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.354876
/projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t2k-w0.5.mod(21):  Reading nostruct-align/1au7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-14328/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t2k-w0.5.mod (nostruct-align/1au7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.038857
/projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t2k-w0.5.mod(22):  Reading nostruct-align/1c1yB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11509/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t2k-w0.5.mod (nostruct-align/1c1yB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.405888
/projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t2k-w0.5.mod(22):  Reading nostruct-align/1fohA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t2k-w0.5.mod (nostruct-align/1fohA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.601852
/projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-w0.5.mod(22):  Reading nostruct-align/1jnrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-31242/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-w0.5.mod (nostruct-align/1jnrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jnrA/nostruct-align/1jnrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.636898
/projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k-w0.5.mod(22):  Reading nostruct-align/1jnrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k-w0.5.mod (nostruct-align/1jnrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jnrB/nostruct-align/1jnrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.420877
/projects/compbio/experiments/models.97/pdb/1g/1g8lA/nostruct-align/1g8lA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13566/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8lA/nostruct-align/1g8lA.t2k-w0.5.mod (nostruct-align/1g8lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8lA/nostruct-align/1g8lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.106911
/projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-w0.5.mod(22):  Reading nostruct-align/1k94A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7439/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-w0.5.mod (nostruct-align/1k94A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k94A/nostruct-align/1k94A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.839863
/projects/compbio/experiments/models.97/pdb/1h/1hi2A/nostruct-align/1hi2A.t2k-w0.5.mod(21):  Reading nostruct-align/1hi2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28301/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hi2A/nostruct-align/1hi2A.t2k-w0.5.mod (nostruct-align/1hi2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hi2A/nostruct-align/1hi2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.104887
/projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-w0.5.mod(22):  Reading nostruct-align/1h4rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-w0.5.mod (nostruct-align/1h4rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h4rA/nostruct-align/1h4rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.401892
/projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k-w0.5.mod(21):  Reading nostruct-align/7fd1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29812/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k-w0.5.mod (nostruct-align/7fd1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.404852
/projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t2k-w0.5.mod(21):  Reading nostruct-align/1gw4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t2k-w0.5.mod (nostruct-align/1gw4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.592854
/projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-w0.5.mod(22):  Reading nostruct-align/1vhh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4096/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-w0.5.mod (nostruct-align/1vhh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.062887
/projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t2k-w0.5.mod(22):  Reading nostruct-align/1spuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t2k-w0.5.mod (nostruct-align/1spuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.914850
/projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t2k-w0.5.mod(21):  Reading nostruct-align/1a9nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20059/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t2k-w0.5.mod (nostruct-align/1a9nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.891857
/projects/compbio/experiments/models.97/pdb/1e/1ekzA/nostruct-align/1ekzA.t2k-w0.5.mod(21):  Reading nostruct-align/1ekzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2960/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ekzA/nostruct-align/1ekzA.t2k-w0.5.mod (nostruct-align/1ekzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ekzA/nostruct-align/1ekzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.515892
/projects/compbio/experiments/models.97/pdb/1e/1e8xA/nostruct-align/1e8xA.t2k-w0.5.mod(21):  Reading nostruct-align/1e8xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-32507/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8xA/nostruct-align/1e8xA.t2k-w0.5.mod (nostruct-align/1e8xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8xA/nostruct-align/1e8xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.498886
/projects/compbio/experiments/models.97/pdb/9l/9ldtA/nostruct-align/9ldtA.t2k-w0.5.mod(22):  Reading nostruct-align/9ldtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-29156/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9l/9ldtA/nostruct-align/9ldtA.t2k-w0.5.mod (nostruct-align/9ldtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9l/9ldtA/nostruct-align/9ldtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.731901
/projects/compbio/experiments/models.97/pdb/1i/1i8aA/nostruct-align/1i8aA.t2k-w0.5.mod(22):  Reading nostruct-align/1i8aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8aA/nostruct-align/1i8aA.t2k-w0.5.mod (nostruct-align/1i8aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8aA/nostruct-align/1i8aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.601852
/projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t2k-w0.5.mod(21):  Reading nostruct-align/1bj4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-22752/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t2k-w0.5.mod (nostruct-align/1bj4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.545902
/projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t2k-w0.5.mod(22):  Reading nostruct-align/1b5tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t2k-w0.5.mod (nostruct-align/1b5tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.264891
/projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t2k-w0.5.mod(21):  Reading nostruct-align/1b72A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14379/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t2k-w0.5.mod (nostruct-align/1b72A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.105873
/projects/compbio/experiments/models.97/pdb/1b/1b72B/nostruct-align/1b72B.t2k-w0.5.mod(21):  Reading nostruct-align/1b72B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b72B/nostruct-align/1b72B.t2k-w0.5.mod (nostruct-align/1b72B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b72B/nostruct-align/1b72B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.613855
/projects/compbio/experiments/models.97/pdb/1g/1gdeA/nostruct-align/1gdeA.t2k-w0.5.mod(22):  Reading nostruct-align/1gdeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13143/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdeA/nostruct-align/1gdeA.t2k-w0.5.mod (nostruct-align/1gdeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gdeA/nostruct-align/1gdeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.105886
/projects/compbio/experiments/models.97/pdb/1g/1g1cA/nostruct-align/1g1cA.t2k-w0.5.mod(22):  Reading nostruct-align/1g1cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-23034/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1cA/nostruct-align/1g1cA.t2k-w0.5.mod (nostruct-align/1g1cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1cA/nostruct-align/1g1cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.584911
/projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t2k-w0.5.mod(21):  Reading nostruct-align/1aszB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-9707/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t2k-w0.5.mod (nostruct-align/1aszB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.415869
/projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-w0.5.mod(22):  Reading nostruct-align/1k0mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24536/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-w0.5.mod (nostruct-align/1k0mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k0mA/nostruct-align/1k0mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.694857
/projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t2k-w0.5.mod(21):  Reading nostruct-align/1daaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t2k-w0.5.mod (nostruct-align/1daaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.030903
/projects/compbio/experiments/models.97/pdb/4c/4cpv/nostruct-align/4cpv.t2k-w0.5.mod(21):  Reading nostruct-align/4cpv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4c/4cpv/nostruct-align/4cpv.t2k-w0.5.mod (nostruct-align/4cpv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4c/4cpv/nostruct-align/4cpv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.995886
/projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t2k-w0.5.mod(21):  Reading nostruct-align/1cleA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-19218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t2k-w0.5.mod (nostruct-align/1cleA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.650875
/projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-w0.5.mod (nostruct-align/1g8mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8mA/nostruct-align/1g8mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.258907
/projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-w0.5.mod(22):  Reading nostruct-align/1gvp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-w0.5.mod (nostruct-align/1gvp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.964880
/projects/compbio/experiments/models.97/pdb/1k/1k7wA/nostruct-align/1k7wA.t2k-w0.5.mod(22):  Reading nostruct-align/1k7wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k7wA/nostruct-align/1k7wA.t2k-w0.5.mod (nostruct-align/1k7wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k7wA/nostruct-align/1k7wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.056908
/projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t2k-w0.5.mod(22):  Reading nostruct-align/6cel.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t2k-w0.5.mod (nostruct-align/6cel.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.975899
/projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t2k-w0.5.mod(21):  Reading nostruct-align/1dhkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-8102/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t2k-w0.5.mod (nostruct-align/1dhkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.704903
/projects/compbio/experiments/models.97/pdb/1h/1h61A/nostruct-align/1h61A.t2k-w0.5.mod(22):  Reading nostruct-align/1h61A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h61A/nostruct-align/1h61A.t2k-w0.5.mod (nostruct-align/1h61A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h61A/nostruct-align/1h61A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.000854
/projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t2k-w0.5.mod(22):  Reading nostruct-align/1vib.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t2k-w0.5.mod (nostruct-align/1vib.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.109903
/projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k-w0.5.mod(21):  Reading nostruct-align/1edqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-7169/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k-w0.5.mod (nostruct-align/1edqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.712904
/projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ie9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4302/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-w0.5.mod (nostruct-align/1ie9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ie9A/nostruct-align/1ie9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.658897
/projects/compbio/experiments/models.97/pdb/1e/1e1oA/nostruct-align/1e1oA.t2k-w0.5.mod(21):  Reading nostruct-align/1e1oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-2484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1oA/nostruct-align/1e1oA.t2k-w0.5.mod (nostruct-align/1e1oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e1oA/nostruct-align/1e1oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.508854
/projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t2k-w0.5.mod(22):  Reading nostruct-align/1vid.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2214/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t2k-w0.5.mod (nostruct-align/1vid.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.665909
/projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-w0.5.mod(22):  Reading nostruct-align/1vie.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1153/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-w0.5.mod (nostruct-align/1vie.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.732897
/projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-w0.5.mod(22):  Reading nostruct-align/1i27A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-w0.5.mod (nostruct-align/1i27A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i27A/nostruct-align/1i27A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.487885
/projects/compbio/experiments/models.97/pdb/1v/1vif/nostruct-align/1vif.t2k-w0.5.mod(22):  Reading nostruct-align/1vif.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8771/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vif/nostruct-align/1vif.t2k-w0.5.mod (nostruct-align/1vif.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vif/nostruct-align/1vif.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.732897
/projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t2k-w0.5.mod(21):  Reading nostruct-align/1vig.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-28735/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t2k-w0.5.mod (nostruct-align/1vig.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.711878
/projects/compbio/experiments/models.97/pdb/1d/1dq3A/nostruct-align/1dq3A.t2k-w0.5.mod(22):  Reading nostruct-align/1dq3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dq3A/nostruct-align/1dq3A.t2k-w0.5.mod (nostruct-align/1dq3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dq3A/nostruct-align/1dq3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.590878
/projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t2k-w0.5.mod(21):  Reading nostruct-align/1vih.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-7840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t2k-w0.5.mod (nostruct-align/1vih.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.711878
/projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t2k-w0.5.mod(21):  Reading nostruct-align/1vii.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-6406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t2k-w0.5.mod (nostruct-align/1vii.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.508884
/projects/compbio/experiments/models.97/pdb/1e/1em9A/nostruct-align/1em9A.t2k-w0.5.mod(22):  Reading nostruct-align/1em9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1em9A/nostruct-align/1em9A.t2k-w0.5.mod (nostruct-align/1em9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1em9A/nostruct-align/1em9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.351871
/projects/compbio/experiments/models.97/pdb/1c/1czyA/nostruct-align/1czyA.t2k-w0.5.mod(22):  Reading nostruct-align/1czyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czyA/nostruct-align/1czyA.t2k-w0.5.mod (nostruct-align/1czyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czyA/nostruct-align/1czyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.150873
/projects/compbio/experiments/models.97/pdb/1e/1e8yA/nostruct-align/1e8yA.t2k-w0.5.mod(22):  Reading nostruct-align/1e8yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e8yA/nostruct-align/1e8yA.t2k-w0.5.mod (nostruct-align/1e8yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e8yA/nostruct-align/1e8yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.933886
/projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t2k-w0.5.mod(22):  Reading nostruct-align/1vin.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t2k-w0.5.mod (nostruct-align/1vin.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.443907
/projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t2k-w0.5.mod(21):  Reading nostruct-align/1b73A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7539/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t2k-w0.5.mod (nostruct-align/1b73A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.287868
/projects/compbio/experiments/models.97/pdb/1c/1czyC/nostruct-align/1czyC.t2k-w0.5.mod(21):  Reading nostruct-align/1czyC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czyC/nostruct-align/1czyC.t2k-w0.5.mod (nostruct-align/1czyC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czyC/nostruct-align/1czyC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.777863
/projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t2k-w0.5.mod(21):  Reading nostruct-align/1qk6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-29228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t2k-w0.5.mod (nostruct-align/1qk6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.163876
/projects/compbio/experiments/models.97/pdb/1j/1jgjA/nostruct-align/1jgjA.t2k-w0.5.mod(21):  Reading nostruct-align/1jgjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-25830/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jgjA/nostruct-align/1jgjA.t2k-w0.5.mod (nostruct-align/1jgjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jgjA/nostruct-align/1jgjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.661875
/projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t2k-w0.5.mod(21):  Reading nostruct-align/1nftA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-17496/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t2k-w0.5.mod (nostruct-align/1nftA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.292887
/projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-w0.5.mod(22):  Reading nostruct-align/3nul.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-w0.5.mod (nostruct-align/3nul.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.911896
/projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t2k-w0.5.mod(22):  Reading nostruct-align/1dabA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t2k-w0.5.mod (nostruct-align/1dabA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.864859
/projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t2k-w0.5.mod(21):  Reading nostruct-align/1xsoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t2k-w0.5.mod (nostruct-align/1xsoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.917898
/projects/compbio/experiments/models.97/pdb/3b/3bdpA/nostruct-align/3bdpA.t2k-w0.5.mod(21):  Reading nostruct-align/3bdpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-28724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bdpA/nostruct-align/3bdpA.t2k-w0.5.mod (nostruct-align/3bdpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3b/3bdpA/nostruct-align/3bdpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.113876
/projects/compbio/experiments/models.97/pdb/1h/1hgvA/nostruct-align/1hgvA.t2k-w0.5.mod(22):  Reading nostruct-align/1hgvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23092/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgvA/nostruct-align/1hgvA.t2k-w0.5.mod (nostruct-align/1hgvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hgvA/nostruct-align/1hgvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.340853
/projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-w0.5.mod(22):  Reading nostruct-align/1fx2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13140/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-w0.5.mod (nostruct-align/1fx2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fx2A/nostruct-align/1fx2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.212875
/projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t2k-w0.5.mod(22):  Reading nostruct-align/1pfiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2984/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t2k-w0.5.mod (nostruct-align/1pfiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.649897
/projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t2k-w0.5.mod(21):  Reading nostruct-align/5cytR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-15982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t2k-w0.5.mod (nostruct-align/5cytR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.306856
/projects/compbio/experiments/models.97/pdb/1f/1fb6A/nostruct-align/1fb6A.t2k-w0.5.mod(22):  Reading nostruct-align/1fb6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30605/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fb6A/nostruct-align/1fb6A.t2k-w0.5.mod (nostruct-align/1fb6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fb6A/nostruct-align/1fb6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.548891
/projects/compbio/experiments/models.97/pdb/1d/1dovA/nostruct-align/1dovA.t2k-w0.5.mod(21):  Reading nostruct-align/1dovA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dovA/nostruct-align/1dovA.t2k-w0.5.mod (nostruct-align/1dovA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dovA/nostruct-align/1dovA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.982895
/projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t2k-w0.5.mod(22):  Reading nostruct-align/1mjoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-1181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t2k-w0.5.mod (nostruct-align/1mjoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.288902
/projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t2k-w0.5.mod(22):  Reading nostruct-align/1b74A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t2k-w0.5.mod (nostruct-align/1b74A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.211874
/projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t2k-w0.5.mod(21):  Reading nostruct-align/1qk7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20710/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t2k-w0.5.mod (nostruct-align/1qk7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.270899
/projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t2k-w0.5.mod(21):  Reading nostruct-align/1vjs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-11445/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t2k-w0.5.mod (nostruct-align/1vjs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.691862
/projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-w0.5.mod(22):  Reading nostruct-align/1kcqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-w0.5.mod (nostruct-align/1kcqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kcqA/nostruct-align/1kcqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.303852
/projects/compbio/experiments/models.97/pdb/1g/1g1eB/nostruct-align/1g1eB.t2k-w0.5.mod(21):  Reading nostruct-align/1g1eB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-27843/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1eB/nostruct-align/1g1eB.t2k-w0.5.mod (nostruct-align/1g1eB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1eB/nostruct-align/1g1eB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.677868
/projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t2k-w0.5.mod(21):  Reading nostruct-align/1vjw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9852/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t2k-w0.5.mod (nostruct-align/1vjw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.216908
/projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t2k-w0.5.mod(21):  Reading nostruct-align/1fokA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-6329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t2k-w0.5.mod (nostruct-align/1fokA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.553907
/projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-w0.5.mod(22):  Reading nostruct-align/1oaa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15050/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-w0.5.mod (nostruct-align/1oaa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.372881
/projects/compbio/experiments/models.97/pdb/1j/1jp3A/nostruct-align/1jp3A.t2k-w0.5.mod(22):  Reading nostruct-align/1jp3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jp3A/nostruct-align/1jp3A.t2k-w0.5.mod (nostruct-align/1jp3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jp3A/nostruct-align/1jp3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.907888
/projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t2k-w0.5.mod(21):  Reading nostruct-align/2eboA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t2k-w0.5.mod (nostruct-align/2eboA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.126867
/projects/compbio/experiments/models.97/pdb/1k/1kl9A/nostruct-align/1kl9A.t2k-w0.5.mod(22):  Reading nostruct-align/1kl9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kl9A/nostruct-align/1kl9A.t2k-w0.5.mod (nostruct-align/1kl9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kl9A/nostruct-align/1kl9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.098890
/projects/compbio/experiments/models.97/pdb/1g/1g8oA/nostruct-align/1g8oA.t2k-w0.5.mod(21):  Reading nostruct-align/1g8oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-6454/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8oA/nostruct-align/1g8oA.t2k-w0.5.mod (nostruct-align/1g8oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8oA/nostruct-align/1g8oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.330889
/projects/compbio/experiments/models.97/pdb/1h/1h4uA/nostruct-align/1h4uA.t2k-w0.5.mod(21):  Reading nostruct-align/1h4uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-24813/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4uA/nostruct-align/1h4uA.t2k-w0.5.mod (nostruct-align/1h4uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h4uA/nostruct-align/1h4uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.753893
/projects/compbio/experiments/models.97/pdb/1f/1fx3A/nostruct-align/1fx3A.t2k-w0.5.mod(22):  Reading nostruct-align/1fx3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx3A/nostruct-align/1fx3A.t2k-w0.5.mod (nostruct-align/1fx3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fx3A/nostruct-align/1fx3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.354895
/projects/compbio/experiments/models.97/pdb/1f/1fvuA/nostruct-align/1fvuA.t2k-w0.5.mod(21):  Reading nostruct-align/1fvuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6964/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvuA/nostruct-align/1fvuA.t2k-w0.5.mod (nostruct-align/1fvuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvuA/nostruct-align/1fvuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.973852
/projects/compbio/experiments/models.97/pdb/1f/1fx3B/nostruct-align/1fx3B.t2k-w0.5.mod(21):  Reading nostruct-align/1fx3B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-27810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx3B/nostruct-align/1fx3B.t2k-w0.5.mod (nostruct-align/1fx3B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fx3B/nostruct-align/1fx3B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.543871
/projects/compbio/experiments/models.97/pdb/1f/1fvuB/nostruct-align/1fvuB.t2k-w0.5.mod(21):  Reading nostruct-align/1fvuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-21266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvuB/nostruct-align/1fvuB.t2k-w0.5.mod (nostruct-align/1fvuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvuB/nostruct-align/1fvuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.180902
/projects/compbio/experiments/models.97/pdb/1e/1edsA/nostruct-align/1edsA.t2k-w0.5.mod(21):  Reading nostruct-align/1edsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-16396/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edsA/nostruct-align/1edsA.t2k-w0.5.mod (nostruct-align/1edsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edsA/nostruct-align/1edsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.545912
/projects/compbio/experiments/models.97/pdb/1e/1ef1A/nostruct-align/1ef1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ef1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20345/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef1A/nostruct-align/1ef1A.t2k-w0.5.mod (nostruct-align/1ef1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ef1A/nostruct-align/1ef1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.540901
/projects/compbio/experiments/models.97/pdb/1e/1ef1C/nostruct-align/1ef1C.t2k-w0.5.mod(22):  Reading nostruct-align/1ef1C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef1C/nostruct-align/1ef1C.t2k-w0.5.mod (nostruct-align/1ef1C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ef1C/nostruct-align/1ef1C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.480881
/projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-w0.5.mod(22):  Reading nostruct-align/1dowA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22727/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-w0.5.mod (nostruct-align/1dowA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dowA/nostruct-align/1dowA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.352875
/projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k-w0.5.mod(22):  Reading nostruct-align/1dowB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27184/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k-w0.5.mod (nostruct-align/1dowB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dowB/nostruct-align/1dowB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.742872
/projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-w0.5.mod(21):  Reading nostruct-align/1yacA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28287/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-w0.5.mod (nostruct-align/1yacA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.352869
/projects/compbio/experiments/models.97/pdb/1e/1e1qG/nostruct-align/1e1qG.t2k-w0.5.mod(21):  Reading nostruct-align/1e1qG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22709/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e1qG/nostruct-align/1e1qG.t2k-w0.5.mod (nostruct-align/1e1qG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e1qG/nostruct-align/1e1qG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.660873
/projects/compbio/experiments/models.97/pdb/1t/1tetH/nostruct-align/1tetH.t2k-w0.5.mod(21):  Reading nostruct-align/1tetH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-12572/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tetH/nostruct-align/1tetH.t2k-w0.5.mod (nostruct-align/1tetH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tetH/nostruct-align/1tetH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.488907
/projects/compbio/experiments/models.97/pdb/1i/1i8dA/nostruct-align/1i8dA.t2k-w0.5.mod(22):  Reading nostruct-align/1i8dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8dA/nostruct-align/1i8dA.t2k-w0.5.mod (nostruct-align/1i8dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8dA/nostruct-align/1i8dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.663877
/projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t2k-w0.5.mod(21):  Reading nostruct-align/1tetL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-7844/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t2k-w0.5.mod (nostruct-align/1tetL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.334852
/projects/compbio/experiments/models.97/pdb/1q/1qk8A/nostruct-align/1qk8A.t2k-w0.5.mod(21):  Reading nostruct-align/1qk8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-26004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk8A/nostruct-align/1qk8A.t2k-w0.5.mod (nostruct-align/1qk8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qk8A/nostruct-align/1qk8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.717896
/projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t2k-w0.5.mod(21):  Reading nostruct-align/1gya.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t2k-w0.5.mod (nostruct-align/1gya.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.204866
/projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t2k-w0.5.mod(21):  Reading nostruct-align/1gdhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-23743/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t2k-w0.5.mod (nostruct-align/1gdhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.134863
/projects/compbio/experiments/models.97/pdb/1e/1esfA/nostruct-align/1esfA.t2k-w0.5.mod(21):  Reading nostruct-align/1esfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-10691/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esfA/nostruct-align/1esfA.t2k-w0.5.mod (nostruct-align/1esfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1esfA/nostruct-align/1esfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.506887
/projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-w0.5.mod(22):  Reading nostruct-align/1jp4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-w0.5.mod (nostruct-align/1jp4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jp4A/nostruct-align/1jp4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.080875
/projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t2k-w0.5.mod(22):  Reading nostruct-align/2trcP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t2k-w0.5.mod (nostruct-align/2trcP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.820894
/projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t2k-w0.5.mod(21):  Reading nostruct-align/1c9fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t2k-w0.5.mod (nostruct-align/1c9fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.864874
/projects/compbio/experiments/models.97/pdb/1g/1g8pA/nostruct-align/1g8pA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8913/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8pA/nostruct-align/1g8pA.t2k-w0.5.mod (nostruct-align/1g8pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8pA/nostruct-align/1g8pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.482882
/projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t2k-w0.5.mod(21):  Reading nostruct-align/1hgxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-30809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t2k-w0.5.mod (nostruct-align/1hgxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.753878
/projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t2k-w0.5.mod(21):  Reading nostruct-align/1pfkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25250/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t2k-w0.5.mod (nostruct-align/1pfkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.888870
/projects/compbio/experiments/models.97/pdb/1h/1h4vB/nostruct-align/1h4vB.t2k-w0.5.mod(22):  Reading nostruct-align/1h4vB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30143/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4vB/nostruct-align/1h4vB.t2k-w0.5.mod (nostruct-align/1h4vB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h4vB/nostruct-align/1h4vB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.896856
/projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-w0.5.mod(22):  Reading nostruct-align/1e30A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-19156/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-w0.5.mod (nostruct-align/1e30A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e30A/nostruct-align/1e30A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.514877
/projects/compbio/experiments/models.97/pdb/1q/1qbqA/nostruct-align/1qbqA.t2k-w0.5.mod(22):  Reading nostruct-align/1qbqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23566/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbqA/nostruct-align/1qbqA.t2k-w0.5.mod (nostruct-align/1qbqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbqA/nostruct-align/1qbqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.920877
/projects/compbio/experiments/models.97/pdb/1o/1obr/nostruct-align/1obr.t2k-w0.5.mod(21):  Reading nostruct-align/1obr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5278/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1obr/nostruct-align/1obr.t2k-w0.5.mod (nostruct-align/1obr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1obr/nostruct-align/1obr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.000874
/projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t2k-w0.5.mod(21):  Reading nostruct-align/1an2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-2701/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t2k-w0.5.mod (nostruct-align/1an2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.845854
/projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t2k-w0.5.mod(22):  Reading nostruct-align/4dpvZ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t2k-w0.5.mod (nostruct-align/4dpvZ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.023880
/projects/compbio/experiments/models.97/pdb/1k/1kyoA/nostruct-align/1kyoA.t2k-w0.5.mod(22):  Reading nostruct-align/1kyoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30779/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kyoA/nostruct-align/1kyoA.t2k-w0.5.mod (nostruct-align/1kyoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kyoA/nostruct-align/1kyoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.895891
/projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qk9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16264/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t2k-w0.5.mod (nostruct-align/1qk9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.268908
/projects/compbio/experiments/models.97/pdb/1f/1f5aA/nostruct-align/1f5aA.t2k-w0.5.mod(22):  Reading nostruct-align/1f5aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6633/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5aA/nostruct-align/1f5aA.t2k-w0.5.mod (nostruct-align/1f5aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5aA/nostruct-align/1f5aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.736893
/projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t2k-w0.5.mod(21):  Reading nostruct-align/5nn9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-27704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t2k-w0.5.mod (nostruct-align/5nn9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.663870
/projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t2k-w0.5.mod(22):  Reading nostruct-align/1vls.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9828/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t2k-w0.5.mod (nostruct-align/1vls.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.503904
/projects/compbio/experiments/models.97/pdb/1e/1esgA/nostruct-align/1esgA.t2k-w0.5.mod(21):  Reading nostruct-align/1esgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7712/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esgA/nostruct-align/1esgA.t2k-w0.5.mod (nostruct-align/1esgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1esgA/nostruct-align/1esgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.054903
/projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k-w0.5.mod(22):  Reading nostruct-align/1irqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k-w0.5.mod (nostruct-align/1irqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irqA/nostruct-align/1irqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.691893
/projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t2k-w0.5.mod(22):  Reading nostruct-align/1wapA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t2k-w0.5.mod (nostruct-align/1wapA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.860863
/projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t2k-w0.5.mod(22):  Reading nostruct-align/1cliA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32147/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t2k-w0.5.mod (nostruct-align/1cliA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.138874
/projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19068/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-w0.5.mod (nostruct-align/1g8qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8qA/nostruct-align/1g8qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.409880
/projects/compbio/experiments/models.97/pdb/1h/1h4wA/nostruct-align/1h4wA.t2k-w0.5.mod(22):  Reading nostruct-align/1h4wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4wA/nostruct-align/1h4wA.t2k-w0.5.mod (nostruct-align/1h4wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h4wA/nostruct-align/1h4wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.808880
/projects/compbio/experiments/models.97/pdb/1h/1h65A/nostruct-align/1h65A.t2k-w0.5.mod(22):  Reading nostruct-align/1h65A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h65A/nostruct-align/1h65A.t2k-w0.5.mod (nostruct-align/1h65A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h65A/nostruct-align/1h65A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.581907
/projects/compbio/experiments/models.97/pdb/1e/1eduA/nostruct-align/1eduA.t2k-w0.5.mod(22):  Reading nostruct-align/1eduA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1219/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eduA/nostruct-align/1eduA.t2k-w0.5.mod (nostruct-align/1eduA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eduA/nostruct-align/1eduA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.016870
/projects/compbio/experiments/models.97/pdb/2m/2madH/nostruct-align/2madH.t2k-w0.5.mod(22):  Reading nostruct-align/2madH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-25639/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2madH/nostruct-align/2madH.t2k-w0.5.mod (nostruct-align/2madH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2madH/nostruct-align/2madH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.426872
/projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-w0.5.mod(22):  Reading nostruct-align/3chbD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15203/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-w0.5.mod (nostruct-align/3chbD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.172861
/projects/compbio/experiments/models.97/pdb/1i/1i8fA/nostruct-align/1i8fA.t2k-w0.5.mod(22):  Reading nostruct-align/1i8fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14980/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8fA/nostruct-align/1i8fA.t2k-w0.5.mod (nostruct-align/1i8fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8fA/nostruct-align/1i8fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.963884
/projects/compbio/experiments/models.97/pdb/1k/1kypA/nostruct-align/1kypA.t2k-w0.5.mod(22):  Reading nostruct-align/1kypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kypA/nostruct-align/1kypA.t2k-w0.5.mod (nostruct-align/1kypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kypA/nostruct-align/1kypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.188898
/projects/compbio/experiments/models.97/pdb/1f/1fhdA/nostruct-align/1fhdA.t2k-w0.5.mod(21):  Reading nostruct-align/1fhdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhdA/nostruct-align/1fhdA.t2k-w0.5.mod (nostruct-align/1fhdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fhdA/nostruct-align/1fhdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.308893
/projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t2k-w0.5.mod(22):  Reading nostruct-align/1b77A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t2k-w0.5.mod (nostruct-align/1b77A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.870907
/projects/compbio/experiments/models.97/pdb/1k/1k0rA/nostruct-align/1k0rA.t2k-w0.5.mod(22):  Reading nostruct-align/1k0rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-20021/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k0rA/nostruct-align/1k0rA.t2k-w0.5.mod (nostruct-align/1k0rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k0rA/nostruct-align/1k0rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.130852
/projects/compbio/experiments/models.97/pdb/1k/1k20A/nostruct-align/1k20A.t2k-w0.5.mod(22):  Reading nostruct-align/1k20A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1227/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k20A/nostruct-align/1k20A.t2k-w0.5.mod (nostruct-align/1k20A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k20A/nostruct-align/1k20A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.344887
/projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23912/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t2k-w0.5.mod (nostruct-align/1qqeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.400875
/projects/compbio/experiments/models.97/pdb/1f/1fonA/nostruct-align/1fonA.t2k-w0.5.mod(21):  Reading nostruct-align/1fonA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31827/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fonA/nostruct-align/1fonA.t2k-w0.5.mod (nostruct-align/1fonA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fonA/nostruct-align/1fonA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.186897
/projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t2k-w0.5.mod(21):  Reading nostruct-align/1dhpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-9189/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t2k-w0.5.mod (nostruct-align/1dhpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.036877
/projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t2k-w0.5.mod(21):  Reading nostruct-align/1d5nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24794/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t2k-w0.5.mod (nostruct-align/1d5nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.016865
/projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-w0.5.mod(22):  Reading nostruct-align/1h4xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-w0.5.mod (nostruct-align/1h4xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h4xA/nostruct-align/1h4xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.176865
/projects/compbio/experiments/models.97/pdb/1e/1edvA/nostruct-align/1edvA.t2k-w0.5.mod(21):  Reading nostruct-align/1edvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-14025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edvA/nostruct-align/1edvA.t2k-w0.5.mod (nostruct-align/1edvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edvA/nostruct-align/1edvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.643869
/projects/compbio/experiments/models.97/pdb/1e/1ef4A/nostruct-align/1ef4A.t2k-w0.5.mod(21):  Reading nostruct-align/1ef4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12784/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef4A/nostruct-align/1ef4A.t2k-w0.5.mod (nostruct-align/1ef4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ef4A/nostruct-align/1ef4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.597910
/projects/compbio/experiments/models.97/pdb/1v/1vnc/nostruct-align/1vnc.t2k-w0.5.mod(21):  Reading nostruct-align/1vnc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vnc/nostruct-align/1vnc.t2k-w0.5.mod (nostruct-align/1vnc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vnc/nostruct-align/1vnc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.934883
/projects/compbio/experiments/models.97/pdb/1e/1e32A/nostruct-align/1e32A.t2k-w0.5.mod(21):  Reading nostruct-align/1e32A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-25894/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e32A/nostruct-align/1e32A.t2k-w0.5.mod (nostruct-align/1e32A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e32A/nostruct-align/1e32A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.552864
/projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t2k-w0.5.mod(22):  Reading nostruct-align/1nukA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8632/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t2k-w0.5.mod (nostruct-align/1nukA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.347878
/projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t2k-w0.5.mod(22):  Reading nostruct-align/3inkC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t2k-w0.5.mod (nostruct-align/3inkC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.541887
/projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-w0.5.mod(22):  Reading nostruct-align/1qd1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22340/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-w0.5.mod (nostruct-align/1qd1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.347866
/projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-w0.5.mod(22):  Reading nostruct-align/1dozA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5301/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-w0.5.mod (nostruct-align/1dozA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.596857
/projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k-w0.5.mod(22):  Reading nostruct-align/1b0b.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k-w0.5.mod (nostruct-align/1b0b.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.274866
/projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t2k-w0.5.mod(21):  Reading nostruct-align/1an4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16090/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t2k-w0.5.mod (nostruct-align/1an4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.743870
/projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t2k-w0.5.mod(21):  Reading nostruct-align/1alvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-6165/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t2k-w0.5.mod (nostruct-align/1alvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.557901
/projects/compbio/experiments/models.97/pdb/1j/1jnxX/nostruct-align/1jnxX.t2k-w0.5.mod(22):  Reading nostruct-align/1jnxX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7349/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnxX/nostruct-align/1jnxX.t2k-w0.5.mod (nostruct-align/1jnxX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jnxX/nostruct-align/1jnxX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.396906
/projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t2k-w0.5.mod(22):  Reading nostruct-align/1b78A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-19727/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t2k-w0.5.mod (nostruct-align/1b78A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.097902
/projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-w0.5.mod(22):  Reading nostruct-align/1vns.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30781/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-w0.5.mod (nostruct-align/1vns.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.075891
/projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t2k-w0.5.mod(21):  Reading nostruct-align/1rfbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t2k-w0.5.mod (nostruct-align/1rfbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.670887
/projects/compbio/experiments/models.97/pdb/1g/1g1iA/nostruct-align/1g1iA.t2k-w0.5.mod(22):  Reading nostruct-align/1g1iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-23175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1iA/nostruct-align/1g1iA.t2k-w0.5.mod (nostruct-align/1g1iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1iA/nostruct-align/1g1iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.209858
/projects/compbio/experiments/models.97/pdb/1e/1esiA/nostruct-align/1esiA.t2k-w0.5.mod(21):  Reading nostruct-align/1esiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25262/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esiA/nostruct-align/1esiA.t2k-w0.5.mod (nostruct-align/1esiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1esiA/nostruct-align/1esiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.255852
/projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t2k-w0.5.mod(21):  Reading nostruct-align/1irsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17077/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t2k-w0.5.mod (nostruct-align/1irsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.014900
/projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19549/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-w0.5.mod (nostruct-align/1qqfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqfA/nostruct-align/1qqfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.364910
/projects/compbio/experiments/models.97/pdb/1j/1jnyA/nostruct-align/1jnyA.t2k-w0.5.mod(22):  Reading nostruct-align/1jnyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jnyA/nostruct-align/1jnyA.t2k-w0.5.mod (nostruct-align/1jnyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jnyA/nostruct-align/1jnyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.032888
/projects/compbio/experiments/models.97/pdb/1v/1vp9/nostruct-align/1vp9.t2k-w0.5.mod(22):  Reading nostruct-align/1vp9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-29714/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vp9/nostruct-align/1vp9.t2k-w0.5.mod (nostruct-align/1vp9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vp9/nostruct-align/1vp9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.608873
/projects/compbio/experiments/models.97/pdb/1o/1oef/nostruct-align/1oef.t2k-w0.5.mod(21):  Reading nostruct-align/1oef.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oef/nostruct-align/1oef.t2k-w0.5.mod (nostruct-align/1oef.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oef/nostruct-align/1oef.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.923893
/projects/compbio/experiments/models.97/pdb/1h/1hi9A/nostruct-align/1hi9A.t2k-w0.5.mod(22):  Reading nostruct-align/1hi9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6184/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hi9A/nostruct-align/1hi9A.t2k-w0.5.mod (nostruct-align/1hi9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hi9A/nostruct-align/1hi9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.167898
/projects/compbio/experiments/models.97/pdb/1f/1fvyA/nostruct-align/1fvyA.t2k-w0.5.mod(21):  Reading nostruct-align/1fvyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvyA/nostruct-align/1fvyA.t2k-w0.5.mod (nostruct-align/1fvyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvyA/nostruct-align/1fvyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.454865
/projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-w0.5.mod(21):  Reading nostruct-align/1nulA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-26045/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-w0.5.mod (nostruct-align/1nulA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.999878
/projects/compbio/experiments/models.97/pdb/1o/1oen/nostruct-align/1oen.t2k-w0.5.mod(22):  Reading nostruct-align/1oen.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-5317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oen/nostruct-align/1oen.t2k-w0.5.mod (nostruct-align/1oen.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oen/nostruct-align/1oen.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.657885
/projects/compbio/experiments/models.97/pdb/1b/1b1a/nostruct-align/1b1a.t2k-w0.5.mod(21):  Reading nostruct-align/1b1a.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-16563/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1a/nostruct-align/1b1a.t2k-w0.5.mod (nostruct-align/1b1a.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b1a/nostruct-align/1b1a.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.134859
/projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t2k-w0.5.mod(21):  Reading nostruct-align/1yagA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-31740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t2k-w0.5.mod (nostruct-align/1yagA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.676865
/projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t2k-w0.5.mod(21):  Reading nostruct-align/1vom.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-14751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t2k-w0.5.mod (nostruct-align/1vom.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.200903
/projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t2k-w0.5.mod(21):  Reading nostruct-align/1yagG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-3371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t2k-w0.5.mod (nostruct-align/1yagG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.993881
/projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t2k-w0.5.mod(22):  Reading nostruct-align/1b79A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-18487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t2k-w0.5.mod (nostruct-align/1b79A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.812878
/projects/compbio/experiments/models.97/pdb/1j/1j4nA/nostruct-align/1j4nA.t2k-w0.5.mod(22):  Reading nostruct-align/1j4nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13242/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j4nA/nostruct-align/1j4nA.t2k-w0.5.mod (nostruct-align/1j4nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j4nA/nostruct-align/1j4nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.915871
/projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t2k-w0.5.mod(21):  Reading nostruct-align/3pbgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-29108/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t2k-w0.5.mod (nostruct-align/3pbgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.335875
/projects/compbio/experiments/models.97/pdb/1g/1g1jA/nostruct-align/1g1jA.t2k-w0.5.mod(22):  Reading nostruct-align/1g1jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11577/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1jA/nostruct-align/1g1jA.t2k-w0.5.mod (nostruct-align/1g1jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1jA/nostruct-align/1g1jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.209858
/projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-w0.5.mod(22):  Reading nostruct-align/1it2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3165/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-w0.5.mod (nostruct-align/1it2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1it2A/nostruct-align/1it2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.239870
/projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12723/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t2k-w0.5.mod (nostruct-align/1qqgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.589853
/projects/compbio/experiments/models.97/pdb/1g/1g8tA/nostruct-align/1g8tA.t2k-w0.5.mod(21):  Reading nostruct-align/1g8tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-27371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8tA/nostruct-align/1g8tA.t2k-w0.5.mod (nostruct-align/1g8tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8tA/nostruct-align/1g8tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.240900
/projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-w0.5.mod(22):  Reading nostruct-align/1dj0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-w0.5.mod (nostruct-align/1dj0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dj0A/nostruct-align/1dj0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.242897
/projects/compbio/experiments/models.97/pdb/1h/1h68A/nostruct-align/1h68A.t2k-w0.5.mod(22):  Reading nostruct-align/1h68A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8914/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h68A/nostruct-align/1h68A.t2k-w0.5.mod (nostruct-align/1h68A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h68A/nostruct-align/1h68A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.864859
/projects/compbio/experiments/models.97/pdb/1f/1fx8A/nostruct-align/1fx8A.t2k-w0.5.mod(22):  Reading nostruct-align/1fx8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16384/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fx8A/nostruct-align/1fx8A.t2k-w0.5.mod (nostruct-align/1fx8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fx8A/nostruct-align/1fx8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.094885
/projects/compbio/experiments/models.97/pdb/1f/1fvzA/nostruct-align/1fvzA.t2k-w0.5.mod(22):  Reading nostruct-align/1fvzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-1139/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fvzA/nostruct-align/1fvzA.t2k-w0.5.mod (nostruct-align/1fvzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fvzA/nostruct-align/1fvzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.687889
/projects/compbio/experiments/models.97/pdb/1e/1edxA/nostruct-align/1edxA.t2k-w0.5.mod(21):  Reading nostruct-align/1edxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edxA/nostruct-align/1edxA.t2k-w0.5.mod (nostruct-align/1edxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edxA/nostruct-align/1edxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.819883
/projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t2k-w0.5.mod(21):  Reading nostruct-align/1vpc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-5374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t2k-w0.5.mod (nostruct-align/1vpc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.188906
/projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t2k-w0.5.mod(21):  Reading nostruct-align/1idaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27046/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t2k-w0.5.mod (nostruct-align/1idaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.416857
/projects/compbio/experiments/models.97/pdb/1b/1b00A/nostruct-align/1b00A.t2k-w0.5.mod(21):  Reading nostruct-align/1b00A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5714/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b00A/nostruct-align/1b00A.t2k-w0.5.mod (nostruct-align/1b00A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b00A/nostruct-align/1b00A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.076902
/projects/compbio/experiments/models.97/pdb/1v/1vpi/nostruct-align/1vpi.t2k-w0.5.mod(21):  Reading nostruct-align/1vpi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-3933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpi/nostruct-align/1vpi.t2k-w0.5.mod (nostruct-align/1vpi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vpi/nostruct-align/1vpi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.046904
/projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t2k-w0.5.mod(21):  Reading nostruct-align/1ofv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-14617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t2k-w0.5.mod (nostruct-align/1ofv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.509909
/projects/compbio/experiments/models.97/pdb/1f/1fhgA/nostruct-align/1fhgA.t2k-w0.5.mod(21):  Reading nostruct-align/1fhgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28522/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhgA/nostruct-align/1fhgA.t2k-w0.5.mod (nostruct-align/1fhgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fhgA/nostruct-align/1fhgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.819855
/projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k-w0.5.mod(22):  Reading nostruct-align/3grs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-27423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k-w0.5.mod (nostruct-align/3grs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.770885
/projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t2k-w0.5.mod(21):  Reading nostruct-align/1c2aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-16097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t2k-w0.5.mod (nostruct-align/1c2aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.906872
/projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-w0.5.mod(22):  Reading nostruct-align/1vpt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-23182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-w0.5.mod (nostruct-align/1vpt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vpt/nostruct-align/1vpt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.721895
/projects/compbio/experiments/models.97/pdb/1g/1g1kA/nostruct-align/1g1kA.t2k-w0.5.mod(21):  Reading nostruct-align/1g1kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-2436/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1kA/nostruct-align/1g1kA.t2k-w0.5.mod (nostruct-align/1g1kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1kA/nostruct-align/1g1kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.125883
/projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t2k-w0.5.mod(21):  Reading nostruct-align/1vpu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6190/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t2k-w0.5.mod (nostruct-align/1vpu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.488873
/projects/compbio/experiments/models.97/pdb/3g/3grx/nostruct-align/3grx.t2k-w0.5.mod(21):  Reading nostruct-align/3grx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18411/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3g/3grx/nostruct-align/3grx.t2k-w0.5.mod (nostruct-align/3grx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3g/3grx/nostruct-align/3grx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.017893
/projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t2k-w0.5.mod (nostruct-align/1qqhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.328886
/projects/compbio/experiments/models.97/pdb/1g/1gm5A/nostruct-align/1gm5A.t2k-w0.5.mod(21):  Reading nostruct-align/1gm5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-15502/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gm5A/nostruct-align/1gm5A.t2k-w0.5.mod (nostruct-align/1gm5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gm5A/nostruct-align/1gm5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.307888
/projects/compbio/experiments/models.97/pdb/1c/1c9kA/nostruct-align/1c9kA.t2k-w0.5.mod(22):  Reading nostruct-align/1c9kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25667/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9kA/nostruct-align/1c9kA.t2k-w0.5.mod (nostruct-align/1c9kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c9kA/nostruct-align/1c9kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.211866
/projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t2k-w0.5.mod(21):  Reading nostruct-align/1c9kB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-7335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t2k-w0.5.mod (nostruct-align/1c9kB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.889879
/projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t2k-w0.5.mod(21):  Reading nostruct-align/1vqb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-21365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t2k-w0.5.mod (nostruct-align/1vqb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.273874
/projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t2k-w0.5.mod(21):  Reading nostruct-align/1yaiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26972/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t2k-w0.5.mod (nostruct-align/1yaiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.267902
/projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t2k-w0.5.mod(21):  Reading nostruct-align/1an7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-18508/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t2k-w0.5.mod (nostruct-align/1an7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.069864
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Reading nostruct-align/2dubE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -37.439899
/projects/compbio/experiments/models.97/pdb/1i/1i8jA/nostruct-align/1i8jA.t2k-w0.5.mod(21):  Reading nostruct-align/1i8jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-24345/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8jA/nostruct-align/1i8jA.t2k-w0.5.mod (nostruct-align/1i8jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8jA/nostruct-align/1i8jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.803886
/projects/compbio/experiments/models.97/pdb/1f/1f5fA/nostruct-align/1f5fA.t2k-w0.5.mod(21):  Reading nostruct-align/1f5fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26072/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5fA/nostruct-align/1f5fA.t2k-w0.5.mod (nostruct-align/1f5fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5fA/nostruct-align/1f5fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.276852
/projects/compbio/experiments/models.97/pdb/1k/1k24A/nostruct-align/1k24A.t2k-w0.5.mod(22):  Reading nostruct-align/1k24A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20098/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k24A/nostruct-align/1k24A.t2k-w0.5.mod (nostruct-align/1k24A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k24A/nostruct-align/1k24A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.201855
/projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t2k-w0.5.mod(21):  Reading nostruct-align/2tysA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-28178/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t2k-w0.5.mod (nostruct-align/2tysA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.487911
/projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t2k-w0.5.mod(22):  Reading nostruct-align/2tysB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-19483/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t2k-w0.5.mod (nostruct-align/2tysB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.564911
/projects/compbio/experiments/models.97/pdb/1f/1fq0A/nostruct-align/1fq0A.t2k-w0.5.mod(21):  Reading nostruct-align/1fq0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-27557/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fq0A/nostruct-align/1fq0A.t2k-w0.5.mod (nostruct-align/1fq0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fq0A/nostruct-align/1fq0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.857859
/projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t2k-w0.5.mod(21):  Reading nostruct-align/1b54.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-6947/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t2k-w0.5.mod (nostruct-align/1b54.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.482903
/projects/compbio/experiments/models.97/pdb/1g/1gkxA/nostruct-align/1gkxA.t2k-w0.5.mod(21):  Reading nostruct-align/1gkxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-11791/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkxA/nostruct-align/1gkxA.t2k-w0.5.mod (nostruct-align/1gkxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gkxA/nostruct-align/1gkxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.686888
/projects/compbio/experiments/models.97/pdb/21/21bi/nostruct-align/21bi.t2k-w0.5.mod(22):  Reading nostruct-align/21bi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-28860/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/21/21bi/nostruct-align/21bi.t2k-w0.5.mod (nostruct-align/21bi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/21/21bi/nostruct-align/21bi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.322868
/projects/compbio/experiments/models.97/pdb/1e/1ezvA/nostruct-align/1ezvA.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16249/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvA/nostruct-align/1ezvA.t2k-w0.5.mod (nostruct-align/1ezvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvA/nostruct-align/1ezvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.589895
/projects/compbio/experiments/models.97/pdb/1e/1ezvB/nostruct-align/1ezvB.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-15860/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvB/nostruct-align/1ezvB.t2k-w0.5.mod (nostruct-align/1ezvB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvB/nostruct-align/1ezvB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.474859
/projects/compbio/experiments/models.97/pdb/1e/1ezvC/nostruct-align/1ezvC.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-22431/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvC/nostruct-align/1ezvC.t2k-w0.5.mod (nostruct-align/1ezvC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvC/nostruct-align/1ezvC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.577868
/projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t2k-w0.5.mod(22):  Reading nostruct-align/1d5rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t2k-w0.5.mod (nostruct-align/1d5rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.675871
/projects/compbio/experiments/models.97/pdb/1e/1ezvD/nostruct-align/1ezvD.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28946/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvD/nostruct-align/1ezvD.t2k-w0.5.mod (nostruct-align/1ezvD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvD/nostruct-align/1ezvD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.283892
/projects/compbio/experiments/models.97/pdb/1e/1ezvF/nostruct-align/1ezvF.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13932/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvF/nostruct-align/1ezvF.t2k-w0.5.mod (nostruct-align/1ezvF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvF/nostruct-align/1ezvF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.891859
/projects/compbio/experiments/models.97/pdb/1e/1edzA/nostruct-align/1edzA.t2k-w0.5.mod(21):  Reading nostruct-align/1edzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-13645/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edzA/nostruct-align/1edzA.t2k-w0.5.mod (nostruct-align/1edzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edzA/nostruct-align/1edzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.551880
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Reading nostruct-align/1ef8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -38.102890
/projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t2k-w0.5.mod(21):  Reading nostruct-align/1forL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-17507/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t2k-w0.5.mod (nostruct-align/1forL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.627895
/projects/compbio/experiments/models.97/pdb/1e/1ezvG/nostruct-align/1ezvG.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1544/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvG/nostruct-align/1ezvG.t2k-w0.5.mod (nostruct-align/1ezvG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvG/nostruct-align/1ezvG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.600910
/projects/compbio/experiments/models.97/pdb/1e/1ezvH/nostruct-align/1ezvH.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-6072/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvH/nostruct-align/1ezvH.t2k-w0.5.mod (nostruct-align/1ezvH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvH/nostruct-align/1ezvH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.137861
/projects/compbio/experiments/models.97/pdb/1e/1ezvI/nostruct-align/1ezvI.t2k-w0.5.mod(22):  Reading nostruct-align/1ezvI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31215/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezvI/nostruct-align/1ezvI.t2k-w0.5.mod (nostruct-align/1ezvI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezvI/nostruct-align/1ezvI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.293900
/projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t2k-w0.5.mod(21):  Reading nostruct-align/1qd5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-23703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t2k-w0.5.mod (nostruct-align/1qd5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.825857
/projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t2k-w0.5.mod(22):  Reading nostruct-align/3ullA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10254/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t2k-w0.5.mod (nostruct-align/3ullA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.940857
/projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t2k-w0.5.mod(21):  Reading nostruct-align/5p21.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-22545/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t2k-w0.5.mod (nostruct-align/5p21.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.279884
/projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t2k-w0.5.mod(21):  Reading nostruct-align/2kauA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t2k-w0.5.mod (nostruct-align/2kauA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.098879
/projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k-w0.5.mod(21):  Reading nostruct-align/1a9xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-26958/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k-w0.5.mod (nostruct-align/1a9xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.027864
/projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t2k-w0.5.mod(21):  Reading nostruct-align/2kauB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-3505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t2k-w0.5.mod (nostruct-align/2kauB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.673883
/projects/compbio/experiments/models.97/pdb/1b/1b4g/nostruct-align/1b4g.t2k-w0.5.mod(22):  Reading nostruct-align/1b4g.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5457/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b4g/nostruct-align/1b4g.t2k-w0.5.mod (nostruct-align/1b4g.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b4g/nostruct-align/1b4g.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.128874
/projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k-w0.5.mod(22):  Reading nostruct-align/1a9xB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-12890/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k-w0.5.mod (nostruct-align/1a9xB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.450895
/projects/compbio/experiments/models.97/pdb/1i/1i8kA/nostruct-align/1i8kA.t2k-w0.5.mod(22):  Reading nostruct-align/1i8kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8kA/nostruct-align/1i8kA.t2k-w0.5.mod (nostruct-align/1i8kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8kA/nostruct-align/1i8kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.835884
/projects/compbio/experiments/models.97/pdb/1i/1i8kB/nostruct-align/1i8kB.t2k-w0.5.mod(22):  Reading nostruct-align/1i8kB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30658/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8kB/nostruct-align/1i8kB.t2k-w0.5.mod (nostruct-align/1i8kB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8kB/nostruct-align/1i8kB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.636868
/projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t2k-w0.5.mod(21):  Reading nostruct-align/2knt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t2k-w0.5.mod (nostruct-align/2knt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.441896
/projects/compbio/experiments/models.97/pdb/1j/1jgsA/nostruct-align/1jgsA.t2k-w0.5.mod(22):  Reading nostruct-align/1jgsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-21455/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jgsA/nostruct-align/1jgsA.t2k-w0.5.mod (nostruct-align/1jgsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jgsA/nostruct-align/1jgsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.086861
/projects/compbio/experiments/models.97/pdb/3f/3fruA/nostruct-align/3fruA.t2k-w0.5.mod(21):  Reading nostruct-align/3fruA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3f/3fruA/nostruct-align/3fruA.t2k-w0.5.mod (nostruct-align/3fruA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3f/3fruA/nostruct-align/3fruA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.714884
/projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t2k-w0.5.mod(22):  Reading nostruct-align/1gdoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t2k-w0.5.mod (nostruct-align/1gdoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.348866
/projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t2k-w0.5.mod(21):  Reading nostruct-align/1ceeB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26610/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t2k-w0.5.mod (nostruct-align/1ceeB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.427876
/projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t2k-w0.5.mod(21):  Reading nostruct-align/1gdoB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-6809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t2k-w0.5.mod (nostruct-align/1gdoB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.154907
/projects/compbio/experiments/models.97/pdb/1e/1esmA/nostruct-align/1esmA.t2k-w0.5.mod(22):  Reading nostruct-align/1esmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esmA/nostruct-align/1esmA.t2k-w0.5.mod (nostruct-align/1esmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1esmA/nostruct-align/1esmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.137896
/projects/compbio/experiments/models.97/pdb/1q/1qqjA/nostruct-align/1qqjA.t2k-w0.5.mod(21):  Reading nostruct-align/1qqjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-28648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqjA/nostruct-align/1qqjA.t2k-w0.5.mod (nostruct-align/1qqjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqjA/nostruct-align/1qqjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.452890
/projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t2k-w0.5.mod(21):  Reading nostruct-align/1b64.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-21550/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t2k-w0.5.mod (nostruct-align/1b64.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.218870
/projects/compbio/experiments/models.97/pdb/1g/1gm7A/nostruct-align/1gm7A.t2k-w0.5.mod(22):  Reading nostruct-align/1gm7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24511/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gm7A/nostruct-align/1gm7A.t2k-w0.5.mod (nostruct-align/1gm7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gm7A/nostruct-align/1gm7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.213898
/projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t2k-w0.5.mod(21):  Reading nostruct-align/1fosE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-21578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t2k-w0.5.mod (nostruct-align/1fosE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.151897
/projects/compbio/experiments/models.97/pdb/1g/1gm7B/nostruct-align/1gm7B.t2k-w0.5.mod(22):  Reading nostruct-align/1gm7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31987/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gm7B/nostruct-align/1gm7B.t2k-w0.5.mod (nostruct-align/1gm7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gm7B/nostruct-align/1gm7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.096870
/projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t2k-w0.5.mod(21):  Reading nostruct-align/1fosF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-24652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t2k-w0.5.mod (nostruct-align/1fosF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.814886
/projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t2k-w0.5.mod(21):  Reading nostruct-align/1tme1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-32484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t2k-w0.5.mod (nostruct-align/1tme1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.968901
/projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-w0.5.mod(22):  Reading nostruct-align/1ezwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16205/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-w0.5.mod (nostruct-align/1ezwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ezwA/nostruct-align/1ezwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.963902
/projects/compbio/experiments/models.97/pdb/1b/1bwsA/nostruct-align/1bwsA.t2k-w0.5.mod(21):  Reading nostruct-align/1bwsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-11051/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwsA/nostruct-align/1bwsA.t2k-w0.5.mod (nostruct-align/1bwsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bwsA/nostruct-align/1bwsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.487881
/projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t2k-w0.5.mod(21):  Reading nostruct-align/1by1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t2k-w0.5.mod (nostruct-align/1by1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.474873
/projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t2k-w0.5.mod(22):  Reading nostruct-align/1lghA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29032/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t2k-w0.5.mod (nostruct-align/1lghA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.432884
/projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t2k-w0.5.mod(22):  Reading nostruct-align/1ha1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t2k-w0.5.mod (nostruct-align/1ha1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.256910
/projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t2k-w0.5.mod(22):  Reading nostruct-align/1lghB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-26118/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t2k-w0.5.mod (nostruct-align/1lghB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.222866
/projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t2k-w0.5.mod(21):  Reading nostruct-align/1vsd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-20590/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t2k-w0.5.mod (nostruct-align/1vsd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.381901
/projects/compbio/experiments/models.97/pdb/1b/1bawA/nostruct-align/1bawA.t2k-w0.5.mod(21):  Reading nostruct-align/1bawA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-27939/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bawA/nostruct-align/1bawA.t2k-w0.5.mod (nostruct-align/1bawA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bawA/nostruct-align/1bawA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.320898
/projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t2k-w0.5.mod(21):  Reading nostruct-align/1bc5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-11619/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t2k-w0.5.mod (nostruct-align/1bc5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.121910
/projects/compbio/experiments/models.97/pdb/1q/1qd6C/nostruct-align/1qd6C.t2k-w0.5.mod(22):  Reading nostruct-align/1qd6C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14930/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd6C/nostruct-align/1qd6C.t2k-w0.5.mod (nostruct-align/1qd6C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qd6C/nostruct-align/1qd6C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.684885
/projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t2k-w0.5.mod(22):  Reading nostruct-align/1ois.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3560/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t2k-w0.5.mod (nostruct-align/1ois.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.976912
/projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t2k-w0.5.mod(21):  Reading nostruct-align/1an9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-23822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t2k-w0.5.mod (nostruct-align/1an9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.508909
/projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t2k-w0.5.mod(21):  Reading nostruct-align/1iknA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-31454/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t2k-w0.5.mod (nostruct-align/1iknA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.719875
/projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t2k-w0.5.mod(21):  Reading nostruct-align/1qjaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-14723/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t2k-w0.5.mod (nostruct-align/1qjaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.545870
/projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t2k-w0.5.mod(21):  Reading nostruct-align/1iknD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-27226/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t2k-w0.5.mod (nostruct-align/1iknD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.190910
/projects/compbio/experiments/models.97/pdb/1j/1jgtA/nostruct-align/1jgtA.t2k-w0.5.mod(22):  Reading nostruct-align/1jgtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jgtA/nostruct-align/1jgtA.t2k-w0.5.mod (nostruct-align/1jgtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jgtA/nostruct-align/1jgtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.283884
/projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t2k-w0.5.mod(22):  Reading nostruct-align/1b5l.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2103/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t2k-w0.5.mod (nostruct-align/1b5l.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.634851
/projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-w0.5.mod(22):  Reading nostruct-align/1hx0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23525/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-w0.5.mod (nostruct-align/1hx0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hx0A/nostruct-align/1hx0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.735901
/projects/compbio/experiments/models.97/pdb/6c/6cpa/nostruct-align/6cpa.t2k-w0.5.mod(21):  Reading nostruct-align/6cpa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-20109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6c/6cpa/nostruct-align/6cpa.t2k-w0.5.mod (nostruct-align/6cpa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6c/6cpa/nostruct-align/6cpa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.813908
/projects/compbio/experiments/models.97/pdb/1k/1k26A/nostruct-align/1k26A.t2k-w0.5.mod(22):  Reading nostruct-align/1k26A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6866/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k26A/nostruct-align/1k26A.t2k-w0.5.mod (nostruct-align/1k26A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k26A/nostruct-align/1k26A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.232899
/projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t2k-w0.5.mod(21):  Reading nostruct-align/1occG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-18590/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t2k-w0.5.mod (nostruct-align/1occG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.211880
/projects/compbio/experiments/models.97/pdb/1g/1gkzA/nostruct-align/1gkzA.t2k-w0.5.mod(22):  Reading nostruct-align/1gkzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gkzA/nostruct-align/1gkzA.t2k-w0.5.mod (nostruct-align/1gkzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gkzA/nostruct-align/1gkzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.322905
/projects/compbio/experiments/models.97/pdb/1k/1kkcA/nostruct-align/1kkcA.t2k-w0.5.mod(22):  Reading nostruct-align/1kkcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-21237/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkcA/nostruct-align/1kkcA.t2k-w0.5.mod (nostruct-align/1kkcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kkcA/nostruct-align/1kkcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.892860
/projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-w0.5.mod(22):  Reading nostruct-align/1d5tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-w0.5.mod (nostruct-align/1d5tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d5tA/nostruct-align/1d5tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.271902
/projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t2k-w0.5.mod(21):  Reading nostruct-align/1tmf4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t2k-w0.5.mod (nostruct-align/1tmf4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.424856
/projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t2k-w0.5.mod(21):  Reading nostruct-align/1mykA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-10555/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t2k-w0.5.mod (nostruct-align/1mykA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.499880
/projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t2k-w0.5.mod(21):  Reading nostruct-align/1aerA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-2452/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t2k-w0.5.mod (nostruct-align/1aerA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.384851
/projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t2k-w0.5.mod(21):  Reading nostruct-align/1pfsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t2k-w0.5.mod (nostruct-align/1pfsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.942879
/projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-w0.5.mod(22):  Reading nostruct-align/1a2pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-7745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-w0.5.mod (nostruct-align/1a2pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.661894
/projects/compbio/experiments/models.97/pdb/1f/1faaA/nostruct-align/1faaA.t2k-w0.5.mod(21):  Reading nostruct-align/1faaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23037/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faaA/nostruct-align/1faaA.t2k-w0.5.mod (nostruct-align/1faaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1faaA/nostruct-align/1faaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.840910
/projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t2k-w0.5.mod(22):  Reading nostruct-align/1b04A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18252/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t2k-w0.5.mod (nostruct-align/1b04A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.356863
/projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-w0.5.mod(22):  Reading nostruct-align/1b6a.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-w0.5.mod (nostruct-align/1b6a.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.141893
/projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t2k-w0.5.mod(21):  Reading nostruct-align/1b6e.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17941/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t2k-w0.5.mod (nostruct-align/1b6e.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.578865
/projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t2k-w0.5.mod(21):  Reading nostruct-align/4rnpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-10182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t2k-w0.5.mod (nostruct-align/4rnpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.967907
/projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k-w0.5.mod(22):  Reading nostruct-align/1b6g.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k-w0.5.mod (nostruct-align/1b6g.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.986910
/projects/compbio/experiments/models.97/pdb/1q/1qjbA/nostruct-align/1qjbA.t2k-w0.5.mod(22):  Reading nostruct-align/1qjbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-13733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjbA/nostruct-align/1qjbA.t2k-w0.5.mod (nostruct-align/1qjbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjbA/nostruct-align/1qjbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.511856
/projects/compbio/experiments/models.97/pdb/1v/1vtp/nostruct-align/1vtp.t2k-w0.5.mod(21):  Reading nostruct-align/1vtp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19884/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vtp/nostruct-align/1vtp.t2k-w0.5.mod (nostruct-align/1vtp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vtp/nostruct-align/1vtp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.064894
/projects/compbio/experiments/models.97/pdb/1h/1hx1B/nostruct-align/1hx1B.t2k-w0.5.mod(22):  Reading nostruct-align/1hx1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2686/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx1B/nostruct-align/1hx1B.t2k-w0.5.mod (nostruct-align/1hx1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hx1B/nostruct-align/1hx1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.077883
/projects/compbio/experiments/models.97/pdb/1h/1hae/nostruct-align/1hae.t2k-w0.5.mod(21):  Reading nostruct-align/1hae.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hae/nostruct-align/1hae.t2k-w0.5.mod (nostruct-align/1hae.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hae/nostruct-align/1hae.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.946892
/projects/compbio/experiments/models.97/pdb/1j/1jguH/nostruct-align/1jguH.t2k-w0.5.mod(22):  Reading nostruct-align/1jguH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5785/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jguH/nostruct-align/1jguH.t2k-w0.5.mod (nostruct-align/1jguH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jguH/nostruct-align/1jguH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.638859
/projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t2k-w0.5.mod(21):  Reading nostruct-align/1vtx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-24029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t2k-w0.5.mod (nostruct-align/1vtx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.461905
/projects/compbio/experiments/models.97/pdb/1f/1fouA/nostruct-align/1fouA.t2k-w0.5.mod(21):  Reading nostruct-align/1fouA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-26898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fouA/nostruct-align/1fouA.t2k-w0.5.mod (nostruct-align/1fouA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fouA/nostruct-align/1fouA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.332857
/projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t2k-w0.5.mod(21):  Reading nostruct-align/2lefA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9462/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t2k-w0.5.mod (nostruct-align/2lefA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.389877
/projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t2k-w0.5.mod(21):  Reading nostruct-align/1b6u.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-23245/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t2k-w0.5.mod (nostruct-align/1b6u.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.517851
/projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t2k-w0.5.mod(21):  Reading nostruct-align/1clqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-9837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t2k-w0.5.mod (nostruct-align/1clqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.696878
/projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-w0.5.mod(22):  Reading nostruct-align/1c9oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-w0.5.mod (nostruct-align/1c9oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.188873
/projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t2k-w0.5.mod(22):  Reading nostruct-align/1han.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20575/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t2k-w0.5.mod (nostruct-align/1han.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.743881
/projects/compbio/experiments/models.97/pdb/1g/1g8yA/nostruct-align/1g8yA.t2k-w0.5.mod(22):  Reading nostruct-align/1g8yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1499/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g8yA/nostruct-align/1g8yA.t2k-w0.5.mod (nostruct-align/1g8yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g8yA/nostruct-align/1g8yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.610857
/projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t2k-w0.5.mod(21):  Reading nostruct-align/1har.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-30682/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t2k-w0.5.mod (nostruct-align/1har.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.082891
/projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t2k-w0.5.mod(21):  Reading nostruct-align/1by3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-15002/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t2k-w0.5.mod (nostruct-align/1by3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.945904
/projects/compbio/experiments/models.97/pdb/1e/1e39A/nostruct-align/1e39A.t2k-w0.5.mod(22):  Reading nostruct-align/1e39A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e39A/nostruct-align/1e39A.t2k-w0.5.mod (nostruct-align/1e39A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e39A/nostruct-align/1e39A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.872875
/projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-w0.5.mod(21):  Reading nostruct-align/5nul.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20632/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-w0.5.mod (nostruct-align/5nul.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.228903
/projects/compbio/experiments/models.97/pdb/1i/1i1dA/nostruct-align/1i1dA.t2k-w0.5.mod(21):  Reading nostruct-align/1i1dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-24697/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1dA/nostruct-align/1i1dA.t2k-w0.5.mod (nostruct-align/1i1dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1dA/nostruct-align/1i1dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.282890
/projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t2k-w0.5.mod(21):  Reading nostruct-align/1qbzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t2k-w0.5.mod (nostruct-align/1qbzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.540882
/projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t2k-w0.5.mod(21):  Reading nostruct-align/1qbzC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27338/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t2k-w0.5.mod (nostruct-align/1qbzC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.284901
/projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-w0.5.mod(22):  Reading nostruct-align/1ikpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-w0.5.mod (nostruct-align/1ikpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ikpA/nostruct-align/1ikpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.730879
/projects/compbio/experiments/models.97/pdb/1i/1i8nA/nostruct-align/1i8nA.t2k-w0.5.mod(22):  Reading nostruct-align/1i8nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8nA/nostruct-align/1i8nA.t2k-w0.5.mod (nostruct-align/1i8nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8nA/nostruct-align/1i8nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.438866
/projects/compbio/experiments/models.97/pdb/1q/1qjcA/nostruct-align/1qjcA.t2k-w0.5.mod(22):  Reading nostruct-align/1qjcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9373/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjcA/nostruct-align/1qjcA.t2k-w0.5.mod (nostruct-align/1qjcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjcA/nostruct-align/1qjcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.312876
/projects/compbio/experiments/models.97/pdb/1m/1mcpL/nostruct-align/1mcpL.t2k-w0.5.mod(21):  Reading nostruct-align/1mcpL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-4357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mcpL/nostruct-align/1mcpL.t2k-w0.5.mod (nostruct-align/1mcpL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mcpL/nostruct-align/1mcpL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.153856
/projects/compbio/experiments/models.97/pdb/1f/1f5jA/nostruct-align/1f5jA.t2k-w0.5.mod(21):  Reading nostruct-align/1f5jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29464/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5jA/nostruct-align/1f5jA.t2k-w0.5.mod (nostruct-align/1f5jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5jA/nostruct-align/1f5jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.232906
/projects/compbio/experiments/models.97/pdb/1h/1hx2A/nostruct-align/1hx2A.t2k-w0.5.mod(21):  Reading nostruct-align/1hx2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-11771/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx2A/nostruct-align/1hx2A.t2k-w0.5.mod (nostruct-align/1hx2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hx2A/nostruct-align/1hx2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.825891
/projects/compbio/experiments/models.97/pdb/1g/1g1pA/nostruct-align/1g1pA.t2k-w0.5.mod(22):  Reading nostruct-align/1g1pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1pA/nostruct-align/1g1pA.t2k-w0.5.mod (nostruct-align/1g1pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1pA/nostruct-align/1g1pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.456905
/projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t2k-w0.5.mod(21):  Reading nostruct-align/1hbg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t2k-w0.5.mod (nostruct-align/1hbg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.742907
/projects/compbio/experiments/models.97/pdb/1h/1hb6A/nostruct-align/1hb6A.t2k-w0.5.mod(22):  Reading nostruct-align/1hb6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13018/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hb6A/nostruct-align/1hb6A.t2k-w0.5.mod (nostruct-align/1hb6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hb6A/nostruct-align/1hb6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.225870
/projects/compbio/experiments/models.97/pdb/1k/1k28D/nostruct-align/1k28D.t2k-w0.5.mod(22):  Reading nostruct-align/1k28D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6519/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k28D/nostruct-align/1k28D.t2k-w0.5.mod (nostruct-align/1k28D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k28D/nostruct-align/1k28D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.739893
/projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t2k-w0.5.mod(21):  Reading nostruct-align/1danH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-28410/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t2k-w0.5.mod (nostruct-align/1danH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.184877
/projects/compbio/experiments/models.97/pdb/1k/1kkeA/nostruct-align/1kkeA.t2k-w0.5.mod(22):  Reading nostruct-align/1kkeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16723/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkeA/nostruct-align/1kkeA.t2k-w0.5.mod (nostruct-align/1kkeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kkeA/nostruct-align/1kkeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.274858
/projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t2k-w0.5.mod(21):  Reading nostruct-align/1hbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-31857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t2k-w0.5.mod (nostruct-align/1hbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.684858
/projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t2k-w0.5.mod(21):  Reading nostruct-align/1hbq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12854/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t2k-w0.5.mod (nostruct-align/1hbq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.479856
/projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t2k-w0.5.mod(22):  Reading nostruct-align/3stdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4607/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t2k-w0.5.mod (nostruct-align/3stdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.028906
/projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t2k-w0.5.mod(21):  Reading nostruct-align/1gseA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-2058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t2k-w0.5.mod (nostruct-align/1gseA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.676889
/projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t2k-w0.5.mod(22):  Reading nostruct-align/1bazA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25146/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t2k-w0.5.mod (nostruct-align/1bazA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.437864
/projects/compbio/experiments/models.97/pdb/1b/1b06A/nostruct-align/1b06A.t2k-w0.5.mod(21):  Reading nostruct-align/1b06A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-8961/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b06A/nostruct-align/1b06A.t2k-w0.5.mod (nostruct-align/1b06A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b06A/nostruct-align/1b06A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.956903
/projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qd9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5059/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t2k-w0.5.mod (nostruct-align/1qd9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.257877
/projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t2k-w0.5.mod(22):  Reading nostruct-align/1bc8C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10191/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t2k-w0.5.mod (nostruct-align/1bc8C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.013910
/projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t2k-w0.5.mod(21):  Reading nostruct-align/1danT.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-31400/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t2k-w0.5.mod (nostruct-align/1danT.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.477879
/projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t2k-w0.5.mod(21):  Reading nostruct-align/1danU.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9159/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t2k-w0.5.mod (nostruct-align/1danU.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.359909
/projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-w0.5.mod(22):  Reading nostruct-align/2arcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-26692/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-w0.5.mod (nostruct-align/2arcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.314859
/projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t2k-w0.5.mod(21):  Reading nostruct-align/2arcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4803/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t2k-w0.5.mod (nostruct-align/2arcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.322874
/projects/compbio/experiments/models.97/pdb/1e/1e9eA/nostruct-align/1e9eA.t2k-w0.5.mod(22):  Reading nostruct-align/1e9eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13678/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9eA/nostruct-align/1e9eA.t2k-w0.5.mod (nostruct-align/1e9eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9eA/nostruct-align/1e9eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.633892
/projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k-w0.5.mod(22):  Reading nostruct-align/1i8oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k-w0.5.mod (nostruct-align/1i8oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8oA/nostruct-align/1i8oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.986864
/projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t2k-w0.5.mod(21):  Reading nostruct-align/1qjdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-28754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t2k-w0.5.mod (nostruct-align/1qjdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.190874
/projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t2k-w0.5.mod(21):  Reading nostruct-align/1hcb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-2928/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t2k-w0.5.mod (nostruct-align/1hcb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.456871
/projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-w0.5.mod(22):  Reading nostruct-align/1dwkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-w0.5.mod (nostruct-align/1dwkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dwkA/nostruct-align/1dwkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.548882
/projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t2k-w0.5.mod(21):  Reading nostruct-align/1hcc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t2k-w0.5.mod (nostruct-align/1hcc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.614906
/projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t2k-w0.5.mod(21):  Reading nostruct-align/1hcd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-22980/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t2k-w0.5.mod (nostruct-align/1hcd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.732862
/projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t2k-w0.5.mod(21):  Reading nostruct-align/1hce.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-29757/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t2k-w0.5.mod (nostruct-align/1hce.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.732862
/projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t2k-w0.5.mod(21):  Reading nostruct-align/1hcl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-7801/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t2k-w0.5.mod (nostruct-align/1hcl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.230904
/projects/compbio/experiments/models.97/pdb/1c/1c9qA/nostruct-align/1c9qA.t2k-w0.5.mod(21):  Reading nostruct-align/1c9qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-14055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9qA/nostruct-align/1c9qA.t2k-w0.5.mod (nostruct-align/1c9qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c9qA/nostruct-align/1c9qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.450888
/projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t2k-w0.5.mod(22):  Reading nostruct-align/1dj7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10974/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t2k-w0.5.mod (nostruct-align/1dj7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.837900
/projects/compbio/experiments/models.97/pdb/35/35c8H/nostruct-align/35c8H.t2k-w0.5.mod(21):  Reading nostruct-align/35c8H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18205/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/35/35c8H/nostruct-align/35c8H.t2k-w0.5.mod (nostruct-align/35c8H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/35/35c8H/nostruct-align/35c8H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.444874
/projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t2k-w0.5.mod(22):  Reading nostruct-align/1dj7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t2k-w0.5.mod (nostruct-align/1dj7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.580866
/projects/compbio/experiments/models.97/pdb/1b/1bwwA/nostruct-align/1bwwA.t2k-w0.5.mod(21):  Reading nostruct-align/1bwwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwwA/nostruct-align/1bwwA.t2k-w0.5.mod (nostruct-align/1bwwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bwwA/nostruct-align/1bwwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.949902
/projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t2k-w0.5.mod(21):  Reading nostruct-align/1by5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t2k-w0.5.mod (nostruct-align/1by5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.746851
/projects/compbio/experiments/models.97/pdb/1h/1hcv/nostruct-align/1hcv.t2k-w0.5.mod(21):  Reading nostruct-align/1hcv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcv/nostruct-align/1hcv.t2k-w0.5.mod (nostruct-align/1hcv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcv/nostruct-align/1hcv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.600864
/projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t2k-w0.5.mod(21):  Reading nostruct-align/1omn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-29351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t2k-w0.5.mod (nostruct-align/1omn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.016876
/projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t2k-w0.5.mod(21):  Reading nostruct-align/1fadA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18134/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t2k-w0.5.mod (nostruct-align/1fadA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.928864
/projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t2k-w0.5.mod(21):  Reading nostruct-align/1omp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-25013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t2k-w0.5.mod (nostruct-align/1omp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.846888
/projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t2k-w0.5.mod(21):  Reading nostruct-align/1hcz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t2k-w0.5.mod (nostruct-align/1hcz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.273867
/projects/compbio/experiments/models.97/pdb/1h/1hvvA/nostruct-align/1hvvA.t2k-w0.5.mod(21):  Reading nostruct-align/1hvvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8442/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvvA/nostruct-align/1hvvA.t2k-w0.5.mod (nostruct-align/1hvvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hvvA/nostruct-align/1hvvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.645884
/projects/compbio/experiments/models.97/pdb/8c/8cho/nostruct-align/8cho.t2k-w0.5.mod(21):  Reading nostruct-align/8cho.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8c/8cho/nostruct-align/8cho.t2k-w0.5.mod (nostruct-align/8cho.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8c/8cho/nostruct-align/8cho.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.138851
/projects/compbio/experiments/models.97/pdb/1g/1gdtA/nostruct-align/1gdtA.t2k-w0.5.mod(21):  Reading nostruct-align/1gdtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16823/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdtA/nostruct-align/1gdtA.t2k-w0.5.mod (nostruct-align/1gdtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gdtA/nostruct-align/1gdtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.543905
/projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t2k-w0.5.mod(21):  Reading nostruct-align/1dapA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-7888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t2k-w0.5.mod (nostruct-align/1dapA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.963871
/projects/compbio/experiments/models.97/pdb/1h/1hdj/nostruct-align/1hdj.t2k-w0.5.mod(21):  Reading nostruct-align/1hdj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-8632/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdj/nostruct-align/1hdj.t2k-w0.5.mod (nostruct-align/1hdj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdj/nostruct-align/1hdj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.883900
/projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t2k-w0.5.mod(21):  Reading nostruct-align/1onc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t2k-w0.5.mod (nostruct-align/1onc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.033850
/projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t2k-w0.5.mod(21):  Reading nostruct-align/1hdp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t2k-w0.5.mod (nostruct-align/1hdp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.520853
/projects/compbio/experiments/models.97/pdb/1d/1dj8A/nostruct-align/1dj8A.t2k-w0.5.mod(22):  Reading nostruct-align/1dj8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27535/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dj8A/nostruct-align/1dj8A.t2k-w0.5.mod (nostruct-align/1dj8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dj8A/nostruct-align/1dj8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.865885
/projects/compbio/experiments/models.97/pdb/2h/2hmiA/nostruct-align/2hmiA.t2k-w0.5.mod(21):  Reading nostruct-align/2hmiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-25414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmiA/nostruct-align/2hmiA.t2k-w0.5.mod (nostruct-align/2hmiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hmiA/nostruct-align/2hmiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.402876
/projects/compbio/experiments/models.97/pdb/1h/1hdr/nostruct-align/1hdr.t2k-w0.5.mod(21):  Reading nostruct-align/1hdr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdr/nostruct-align/1hdr.t2k-w0.5.mod (nostruct-align/1hdr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdr/nostruct-align/1hdr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.820881
/projects/compbio/experiments/models.97/pdb/1b/1by6A/nostruct-align/1by6A.t2k-w0.5.mod(21):  Reading nostruct-align/1by6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-31224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by6A/nostruct-align/1by6A.t2k-w0.5.mod (nostruct-align/1by6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1by6A/nostruct-align/1by6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.305872
/projects/compbio/experiments/models.97/pdb/1i/1idiA/nostruct-align/1idiA.t2k-w0.5.mod(21):  Reading nostruct-align/1idiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-32357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idiA/nostruct-align/1idiA.t2k-w0.5.mod (nostruct-align/1idiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1idiA/nostruct-align/1idiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.285900
/projects/compbio/experiments/models.97/pdb/1f/1faeA/nostruct-align/1faeA.t2k-w0.5.mod(22):  Reading nostruct-align/1faeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11438/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faeA/nostruct-align/1faeA.t2k-w0.5.mod (nostruct-align/1faeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1faeA/nostruct-align/1faeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.507895
/projects/compbio/experiments/models.97/pdb/6c/6cts/nostruct-align/6cts.t2k-w0.5.mod(21):  Reading nostruct-align/6cts.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-25910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6c/6cts/nostruct-align/6cts.t2k-w0.5.mod (nostruct-align/6cts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6c/6cts/nostruct-align/6cts.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.197876
/projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t2k-w0.5.mod(22):  Reading nostruct-align/1qqp1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t2k-w0.5.mod (nostruct-align/1qqp1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.291883
/projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t2k-w0.5.mod(22):  Reading nostruct-align/1qqp2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t2k-w0.5.mod (nostruct-align/1qqp2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.608864
/projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t2k-w0.5.mod(22):  Reading nostruct-align/1qqp3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12535/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t2k-w0.5.mod (nostruct-align/1qqp3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.997883
/projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t2k-w0.5.mod(22):  Reading nostruct-align/1qqp4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-4322/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t2k-w0.5.mod (nostruct-align/1qqp4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.224867
/projects/compbio/experiments/models.97/pdb/1o/1ont/nostruct-align/1ont.t2k-w0.5.mod(22):  Reading nostruct-align/1ont.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3951/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ont/nostruct-align/1ont.t2k-w0.5.mod (nostruct-align/1ont.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ont/nostruct-align/1ont.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.182886
/projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-w0.5.mod(21):  Reading nostruct-align/1e9gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-w0.5.mod (nostruct-align/1e9gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9gA/nostruct-align/1e9gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.851891
/projects/compbio/experiments/models.97/pdb/1e/1e9gB/nostruct-align/1e9gB.t2k-w0.5.mod(22):  Reading nostruct-align/1e9gB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9gB/nostruct-align/1e9gB.t2k-w0.5.mod (nostruct-align/1e9gB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9gB/nostruct-align/1e9gB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.730864
/projects/compbio/experiments/models.97/pdb/1f/1fhoA/nostruct-align/1fhoA.t2k-w0.5.mod(21):  Reading nostruct-align/1fhoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-10986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhoA/nostruct-align/1fhoA.t2k-w0.5.mod (nostruct-align/1fhoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fhoA/nostruct-align/1fhoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.461851
/projects/compbio/experiments/models.97/pdb/1f/1f5mA/nostruct-align/1f5mA.t2k-w0.5.mod(22):  Reading nostruct-align/1f5mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1721/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5mA/nostruct-align/1f5mA.t2k-w0.5.mod (nostruct-align/1f5mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5mA/nostruct-align/1f5mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.845871
/projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t2k-w0.5.mod(21):  Reading nostruct-align/1b6cB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-17784/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t2k-w0.5.mod (nostruct-align/1b6cB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.929899
/projects/compbio/experiments/models.97/pdb/1f/1f5mB/nostruct-align/1f5mB.t2k-w0.5.mod(21):  Reading nostruct-align/1f5mB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8119/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5mB/nostruct-align/1f5mB.t2k-w0.5.mod (nostruct-align/1f5mB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5mB/nostruct-align/1f5mB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.223877
/projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t2k-w0.5.mod(22):  Reading nostruct-align/1atiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-24727/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t2k-w0.5.mod (nostruct-align/1atiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.961855
/projects/compbio/experiments/models.97/pdb/1g/1g1sA/nostruct-align/1g1sA.t2k-w0.5.mod(22):  Reading nostruct-align/1g1sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12794/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1sA/nostruct-align/1g1sA.t2k-w0.5.mod (nostruct-align/1g1sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1sA/nostruct-align/1g1sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.787857
/projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t2k-w0.5.mod(22):  Reading nostruct-align/1g31A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t2k-w0.5.mod (nostruct-align/1g31A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.438887
/projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t2k-w0.5.mod(21):  Reading nostruct-align/1atiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-30201/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t2k-w0.5.mod (nostruct-align/1atiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.618906
/projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-w0.5.mod(22):  Reading nostruct-align/1eu1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-w0.5.mod (nostruct-align/1eu1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eu1A/nostruct-align/1eu1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.333889
/projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t2k-w0.5.mod(21):  Reading nostruct-align/2dkb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t2k-w0.5.mod (nostruct-align/2dkb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.608850
/projects/compbio/experiments/models.97/pdb/1d/1daqA/nostruct-align/1daqA.t2k-w0.5.mod(21):  Reading nostruct-align/1daqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13653/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1daqA/nostruct-align/1daqA.t2k-w0.5.mod (nostruct-align/1daqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1daqA/nostruct-align/1daqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.348888
/projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t2k-w0.5.mod(22):  Reading nostruct-align/1bpoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25721/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t2k-w0.5.mod (nostruct-align/1bpoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.733900
/projects/compbio/experiments/models.97/pdb/1j/1jobA/nostruct-align/1jobA.t2k-w0.5.mod(22):  Reading nostruct-align/1jobA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-7574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jobA/nostruct-align/1jobA.t2k-w0.5.mod (nostruct-align/1jobA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jobA/nostruct-align/1jobA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.879908
/projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t2k-w0.5.mod(21):  Reading nostruct-align/1rmvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t2k-w0.5.mod (nostruct-align/1rmvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.219885
/projects/compbio/experiments/models.97/pdb/1c/1cn3F/nostruct-align/1cn3F.t2k-w0.5.mod(22):  Reading nostruct-align/1cn3F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cn3F/nostruct-align/1cn3F.t2k-w0.5.mod (nostruct-align/1cn3F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cn3F/nostruct-align/1cn3F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.909903
/projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t2k-w0.5.mod(21):  Reading nostruct-align/1mypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1678/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t2k-w0.5.mod (nostruct-align/1mypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.884911
/projects/compbio/experiments/models.97/pdb/1d/1d5yA/nostruct-align/1d5yA.t2k-w0.5.mod(21):  Reading nostruct-align/1d5yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-19139/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d5yA/nostruct-align/1d5yA.t2k-w0.5.mod (nostruct-align/1d5yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d5yA/nostruct-align/1d5yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.477888
/projects/compbio/experiments/models.97/pdb/1m/1mypB/nostruct-align/1mypB.t2k-w0.5.mod(21):  Reading nostruct-align/1mypB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-27787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mypB/nostruct-align/1mypB.t2k-w0.5.mod (nostruct-align/1mypB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mypB/nostruct-align/1mypB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.880894
/projects/compbio/experiments/models.97/pdb/1h/1h5bA/nostruct-align/1h5bA.t2k-w0.5.mod(21):  Reading nostruct-align/1h5bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5bA/nostruct-align/1h5bA.t2k-w0.5.mod (nostruct-align/1h5bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h5bA/nostruct-align/1h5bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.193874
/projects/compbio/experiments/models.97/pdb/1y/1ypcI/nostruct-align/1ypcI.t2k-w0.5.mod(21):  Reading nostruct-align/1ypcI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-6763/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ypcI/nostruct-align/1ypcI.t2k-w0.5.mod (nostruct-align/1ypcI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ypcI/nostruct-align/1ypcI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.912909
/projects/compbio/experiments/models.97/pdb/1t/1tfaA/nostruct-align/1tfaA.t2k-w0.5.mod(21):  Reading nostruct-align/1tfaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-8053/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfaA/nostruct-align/1tfaA.t2k-w0.5.mod (nostruct-align/1tfaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfaA/nostruct-align/1tfaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.311882
/projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t2k-w0.5.mod(21):  Reading nostruct-align/1hev.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t2k-w0.5.mod (nostruct-align/1hev.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.504879
/projects/compbio/experiments/models.97/pdb/1i/1i1hA/nostruct-align/1i1hA.t2k-w0.5.mod(22):  Reading nostruct-align/1i1hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2599/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1hA/nostruct-align/1i1hA.t2k-w0.5.mod (nostruct-align/1i1hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1hA/nostruct-align/1i1hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.058901
/projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t2k-w0.5.mod(21):  Reading nostruct-align/1mctA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16403/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t2k-w0.5.mod (nostruct-align/1mctA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.198868
/projects/compbio/experiments/models.97/pdb/1f/1fafA/nostruct-align/1fafA.t2k-w0.5.mod(21):  Reading nostruct-align/1fafA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-27387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fafA/nostruct-align/1fafA.t2k-w0.5.mod (nostruct-align/1fafA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fafA/nostruct-align/1fafA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.972872
/projects/compbio/experiments/models.97/pdb/1k/1krrA/nostruct-align/1krrA.t2k-w0.5.mod(22):  Reading nostruct-align/1krrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13519/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1krrA/nostruct-align/1krrA.t2k-w0.5.mod (nostruct-align/1krrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1krrA/nostruct-align/1krrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.698904
/projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t2k-w0.5.mod(22):  Reading nostruct-align/8atcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t2k-w0.5.mod (nostruct-align/8atcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.159903
/projects/compbio/experiments/models.97/pdb/1w/1wpoA/nostruct-align/1wpoA.t2k-w0.5.mod(22):  Reading nostruct-align/1wpoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14027/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wpoA/nostruct-align/1wpoA.t2k-w0.5.mod (nostruct-align/1wpoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wpoA/nostruct-align/1wpoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.319872
/projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t2k-w0.5.mod(22):  Reading nostruct-align/1wpoB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10658/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t2k-w0.5.mod (nostruct-align/1wpoB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.166887
/projects/compbio/experiments/models.97/pdb/1e/1eljA/nostruct-align/1eljA.t2k-w0.5.mod(22):  Reading nostruct-align/1eljA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-7929/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eljA/nostruct-align/1eljA.t2k-w0.5.mod (nostruct-align/1eljA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eljA/nostruct-align/1eljA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.789862
/projects/compbio/experiments/models.97/pdb/1i/1im2A/nostruct-align/1im2A.t2k-w0.5.mod(22):  Reading nostruct-align/1im2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im2A/nostruct-align/1im2A.t2k-w0.5.mod (nostruct-align/1im2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1im2A/nostruct-align/1im2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.823904
/projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k-w0.5.mod(21):  Reading nostruct-align/1mctI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k-w0.5.mod (nostruct-align/1mctI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.985865
/projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-w0.5.mod(22):  Reading nostruct-align/1iktA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31353/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-w0.5.mod (nostruct-align/1iktA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iktA/nostruct-align/1iktA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.737869
/projects/compbio/experiments/models.97/pdb/1q/1qjgA/nostruct-align/1qjgA.t2k-w0.5.mod(22):  Reading nostruct-align/1qjgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-20230/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjgA/nostruct-align/1qjgA.t2k-w0.5.mod (nostruct-align/1qjgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjgA/nostruct-align/1qjgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.105875
/projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-w0.5.mod(22):  Reading nostruct-align/1f5nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-518929/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-w0.5.mod (nostruct-align/1f5nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5nA/nostruct-align/1f5nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.555891
/projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t2k-w0.5.mod(21):  Reading nostruct-align/1dwnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18189/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t2k-w0.5.mod (nostruct-align/1dwnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.750851
/projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-w0.5.mod(22):  Reading nostruct-align/1hx6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16410/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-w0.5.mod (nostruct-align/1hx6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hx6A/nostruct-align/1hx6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.412899
/projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t2k-w0.5.mod(21):  Reading nostruct-align/1hfc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-15253/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t2k-w0.5.mod (nostruct-align/1hfc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.167866
/projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t2k-w0.5.mod(21):  Reading nostruct-align/1celA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-18777/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t2k-w0.5.mod (nostruct-align/1celA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.940865
/projects/compbio/experiments/models.97/pdb/1g/1gdvA/nostruct-align/1gdvA.t2k-w0.5.mod(21):  Reading nostruct-align/1gdvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-2263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gdvA/nostruct-align/1gdvA.t2k-w0.5.mod (nostruct-align/1gdvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gdvA/nostruct-align/1gdvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.179893
/projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k-w0.5.mod(22):  Reading nostruct-align/1g1tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k-w0.5.mod (nostruct-align/1g1tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1tA/nostruct-align/1g1tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.702909
/projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t2k-w0.5.mod(21):  Reading nostruct-align/1hfh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-16303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t2k-w0.5.mod (nostruct-align/1hfh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.234873
/projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t2k-w0.5.mod(21):  Reading nostruct-align/1hfi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-28627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t2k-w0.5.mod (nostruct-align/1hfi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.814890
/projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t2k-w0.5.mod(21):  Reading nostruct-align/2ae2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t2k-w0.5.mod (nostruct-align/2ae2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.103855
/projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-567/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-w0.5.mod (nostruct-align/1qqqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqqA/nostruct-align/1qqqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.450874
/projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t2k-w0.5.mod(22):  Reading nostruct-align/1opc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12996/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t2k-w0.5.mod (nostruct-align/1opc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.959898
/projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-w0.5.mod(22):  Reading nostruct-align/1opd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12411/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-w0.5.mod (nostruct-align/1opd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.083891
/projects/compbio/experiments/models.97/pdb/1c/1cn4C/nostruct-align/1cn4C.t2k-w0.5.mod(21):  Reading nostruct-align/1cn4C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-17412/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cn4C/nostruct-align/1cn4C.t2k-w0.5.mod (nostruct-align/1cn4C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cn4C/nostruct-align/1cn4C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.281883
/projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t2k-w0.5.mod(21):  Reading nostruct-align/2dln.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29392/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t2k-w0.5.mod (nostruct-align/2dln.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.447878
/projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t2k-w0.5.mod(22):  Reading nostruct-align/1bwzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8088/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t2k-w0.5.mod (nostruct-align/1bwzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.153873
/projects/compbio/experiments/models.97/pdb/1h/1hfs/nostruct-align/1hfs.t2k-w0.5.mod(21):  Reading nostruct-align/1hfs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-28414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfs/nostruct-align/1hfs.t2k-w0.5.mod (nostruct-align/1hfs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfs/nostruct-align/1hfs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.327892
/projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t2k-w0.5.mod(21):  Reading nostruct-align/1fwcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-16502/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t2k-w0.5.mod (nostruct-align/1fwcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.098879
/projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t2k-w0.5.mod(21):  Reading nostruct-align/487dL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t2k-w0.5.mod (nostruct-align/487dL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.365870
/projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t2k-w0.5.mod(21):  Reading nostruct-align/1fwcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-16734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t2k-w0.5.mod (nostruct-align/1fwcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.673883
/projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t2k-w0.5.mod(22):  Reading nostruct-align/1a2vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-25703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t2k-w0.5.mod (nostruct-align/1a2vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.414865
/projects/compbio/experiments/models.97/pdb/1c/1clvI/nostruct-align/1clvI.t2k-w0.5.mod(22):  Reading nostruct-align/1clvI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clvI/nostruct-align/1clvI.t2k-w0.5.mod (nostruct-align/1clvI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1clvI/nostruct-align/1clvI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.199850
/projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t2k-w0.5.mod(22):  Reading nostruct-align/1fwcC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25931/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t2k-w0.5.mod (nostruct-align/1fwcC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.103905
/projects/compbio/experiments/models.97/pdb/1h/1hfx/nostruct-align/1hfx.t2k-w0.5.mod(21):  Reading nostruct-align/1hfx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-6709/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hfx/nostruct-align/1hfx.t2k-w0.5.mod (nostruct-align/1hfx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hfx/nostruct-align/1hfx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.944910
/projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t2k-w0.5.mod(21):  Reading nostruct-align/1opp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t2k-w0.5.mod (nostruct-align/1opp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.441898
/projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t2k-w0.5.mod(22):  Reading nostruct-align/1opr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t2k-w0.5.mod (nostruct-align/1opr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.293863
/projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t2k-w0.5.mod(21):  Reading nostruct-align/1pnbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-12225/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t2k-w0.5.mod (nostruct-align/1pnbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.027880
/projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-w0.5.mod(22):  Reading nostruct-align/1elkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19765/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-w0.5.mod (nostruct-align/1elkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.059887
/projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t2k-w0.5.mod(21):  Reading nostruct-align/1pnbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-14878/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t2k-w0.5.mod (nostruct-align/1pnbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.591896
/projects/compbio/experiments/models.97/pdb/1i/1im3D/nostruct-align/1im3D.t2k-w0.5.mod(22):  Reading nostruct-align/1im3D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21476/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im3D/nostruct-align/1im3D.t2k-w0.5.mod (nostruct-align/1im3D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1im3D/nostruct-align/1im3D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.995878
/projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t2k-w0.5.mod(21):  Reading nostruct-align/1opy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-26619/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t2k-w0.5.mod (nostruct-align/1opy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.934898
/projects/compbio/experiments/models.97/pdb/1g/1g33A/nostruct-align/1g33A.t2k-w0.5.mod(22):  Reading nostruct-align/1g33A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g33A/nostruct-align/1g33A.t2k-w0.5.mod (nostruct-align/1g33A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g33A/nostruct-align/1g33A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.284872
/projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t2k-w0.5.mod(21):  Reading nostruct-align/6prcC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3635/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t2k-w0.5.mod (nostruct-align/6prcC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.926882
/projects/compbio/experiments/models.97/pdb/1i/1i1iP/nostruct-align/1i1iP.t2k-w0.5.mod(22):  Reading nostruct-align/1i1iP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21382/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1iP/nostruct-align/1i1iP.t2k-w0.5.mod (nostruct-align/1i1iP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1iP/nostruct-align/1i1iP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.366909
/projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-w0.5.mod(21):  Reading nostruct-align/1eu3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-23666/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-w0.5.mod (nostruct-align/1eu3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eu3A/nostruct-align/1eu3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.222895
/projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-w0.5.mod(22):  Reading nostruct-align/1dc1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-24927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-w0.5.mod (nostruct-align/1dc1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dc1A/nostruct-align/1dc1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.739866
/projects/compbio/experiments/models.97/pdb/2g/2gd1O/nostruct-align/2gd1O.t2k-w0.5.mod(21):  Reading nostruct-align/2gd1O.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gd1O/nostruct-align/2gd1O.t2k-w0.5.mod (nostruct-align/2gd1O.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gd1O/nostruct-align/2gd1O.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.506893
/projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t2k-w0.5.mod(22):  Reading nostruct-align/1qs0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t2k-w0.5.mod (nostruct-align/1qs0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.858881
/projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-769/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t2k-w0.5.mod (nostruct-align/1qqrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.664881
/projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t2k-w0.5.mod(22):  Reading nostruct-align/6prcH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-24890/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t2k-w0.5.mod (nostruct-align/6prcH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.433903
/projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t2k-w0.5.mod(22):  Reading nostruct-align/1qs0B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t2k-w0.5.mod (nostruct-align/1qs0B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.808878
/projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t2k-w0.5.mod(21):  Reading nostruct-align/1c9uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19979/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t2k-w0.5.mod (nostruct-align/1c9uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.322872
/projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t2k-w0.5.mod(21):  Reading nostruct-align/6prcL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t2k-w0.5.mod (nostruct-align/6prcL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.700897
/projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t2k-w0.5.mod(21):  Reading nostruct-align/6prcM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-22524/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t2k-w0.5.mod (nostruct-align/6prcM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.604870
/projects/compbio/experiments/models.97/pdb/1p/1pfzA/nostruct-align/1pfzA.t2k-w0.5.mod(21):  Reading nostruct-align/1pfzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9153/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfzA/nostruct-align/1pfzA.t2k-w0.5.mod (nostruct-align/1pfzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pfzA/nostruct-align/1pfzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.734907
/projects/compbio/experiments/models.97/pdb/1j/1jvnA/nostruct-align/1jvnA.t2k-w0.5.mod(22):  Reading nostruct-align/1jvnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jvnA/nostruct-align/1jvnA.t2k-w0.5.mod (nostruct-align/1jvnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jvnA/nostruct-align/1jvnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.546909
/projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-w0.5.mod(22):  Reading nostruct-align/1i1jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-w0.5.mod (nostruct-align/1i1jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1jA/nostruct-align/1i1jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.953873
/projects/compbio/experiments/models.97/pdb/1j/1jb0A/nostruct-align/1jb0A.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0A/nostruct-align/1jb0A.t2k-w0.5.mod (nostruct-align/1jb0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0A/nostruct-align/1jb0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.713860
/projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t2k-w0.5.mod(21):  Reading nostruct-align/1yasA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30909/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t2k-w0.5.mod (nostruct-align/1yasA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.808857
/projects/compbio/experiments/models.97/pdb/1j/1jb0C/nostruct-align/1jb0C.t2k-w0.5.mod(21):  Reading nostruct-align/1jb0C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28558/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0C/nostruct-align/1jb0C.t2k-w0.5.mod (nostruct-align/1jb0C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0C/nostruct-align/1jb0C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.489861
/projects/compbio/experiments/models.97/pdb/1j/1jb0D/nostruct-align/1jb0D.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0D/nostruct-align/1jb0D.t2k-w0.5.mod (nostruct-align/1jb0D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0D/nostruct-align/1jb0D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.539862
/projects/compbio/experiments/models.97/pdb/1j/1jb0E/nostruct-align/1jb0E.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0E/nostruct-align/1jb0E.t2k-w0.5.mod (nostruct-align/1jb0E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0E/nostruct-align/1jb0E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.829899
/projects/compbio/experiments/models.97/pdb/1j/1jb0F/nostruct-align/1jb0F.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0F/nostruct-align/1jb0F.t2k-w0.5.mod (nostruct-align/1jb0F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0F/nostruct-align/1jb0F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.875887
/projects/compbio/experiments/models.97/pdb/1i/1im4A/nostruct-align/1im4A.t2k-w0.5.mod(21):  Reading nostruct-align/1im4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-6157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im4A/nostruct-align/1im4A.t2k-w0.5.mod (nostruct-align/1im4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1im4A/nostruct-align/1im4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.695898
/projects/compbio/experiments/models.97/pdb/1i/1i8tA/nostruct-align/1i8tA.t2k-w0.5.mod(21):  Reading nostruct-align/1i8tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15149/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i8tA/nostruct-align/1i8tA.t2k-w0.5.mod (nostruct-align/1i8tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i8tA/nostruct-align/1i8tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.207853
/projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t2k-w0.5.mod(21):  Reading nostruct-align/1bihA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-19480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t2k-w0.5.mod (nostruct-align/1bihA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -35.454861
/projects/compbio/experiments/models.97/pdb/1j/1jb0I/nostruct-align/1jb0I.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31514/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0I/nostruct-align/1jb0I.t2k-w0.5.mod (nostruct-align/1jb0I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0I/nostruct-align/1jb0I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.734875
/projects/compbio/experiments/models.97/pdb/1j/1jb0J/nostruct-align/1jb0J.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0J.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0J/nostruct-align/1jb0J.t2k-w0.5.mod (nostruct-align/1jb0J.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0J/nostruct-align/1jb0J.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.877893
/projects/compbio/experiments/models.97/pdb/1j/1jb0K/nostruct-align/1jb0K.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0K.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21681/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0K/nostruct-align/1jb0K.t2k-w0.5.mod (nostruct-align/1jb0K.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0K/nostruct-align/1jb0K.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.280869
/projects/compbio/experiments/models.97/pdb/1j/1jb0L/nostruct-align/1jb0L.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0L.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5342/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0L/nostruct-align/1jb0L.t2k-w0.5.mod (nostruct-align/1jb0L.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0L/nostruct-align/1jb0L.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.126904
/projects/compbio/experiments/models.97/pdb/1j/1jb0M/nostruct-align/1jb0M.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0M.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3872/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0M/nostruct-align/1jb0M.t2k-w0.5.mod (nostruct-align/1jb0M.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0M/nostruct-align/1jb0M.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.384859
/projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t2k-w0.5.mod(22):  Reading nostruct-align/1atlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t2k-w0.5.mod (nostruct-align/1atlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.748890
/projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t2k-w0.5.mod(21):  Reading nostruct-align/1br0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7184/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t2k-w0.5.mod (nostruct-align/1br0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.621874
/projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-w0.5.mod(22):  Reading nostruct-align/1qs1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2637/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-w0.5.mod (nostruct-align/1qs1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.729853
/projects/compbio/experiments/models.97/pdb/1q/1qqsA/nostruct-align/1qqsA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-17455/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqsA/nostruct-align/1qqsA.t2k-w0.5.mod (nostruct-align/1qqsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqsA/nostruct-align/1qqsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.632860
/projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-w0.5.mod(22):  Reading nostruct-align/1orc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-w0.5.mod (nostruct-align/1orc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.210907
/projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t2k-w0.5.mod(21):  Reading nostruct-align/1clxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-20144/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t2k-w0.5.mod (nostruct-align/1clxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.326900
/projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t2k-w0.5.mod(21):  Reading nostruct-align/8fabA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24738/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t2k-w0.5.mod (nostruct-align/8fabA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.670876
/projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t2k-w0.5.mod(21):  Reading nostruct-align/2masA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-26241/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t2k-w0.5.mod (nostruct-align/2masA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.010897
/projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t2k-w0.5.mod(21):  Reading nostruct-align/8fabB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-824/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t2k-w0.5.mod (nostruct-align/8fabB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.266890
/projects/compbio/experiments/models.97/pdb/1j/1jb0X/nostruct-align/1jb0X.t2k-w0.5.mod(22):  Reading nostruct-align/1jb0X.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19261/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb0X/nostruct-align/1jb0X.t2k-w0.5.mod (nostruct-align/1jb0X.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb0X/nostruct-align/1jb0X.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.337887
/projects/compbio/experiments/models.97/pdb/2s/2sodB/nostruct-align/2sodB.t2k-w0.5.mod(21):  Reading nostruct-align/2sodB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-8747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sodB/nostruct-align/2sodB.t2k-w0.5.mod (nostruct-align/2sodB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sodB/nostruct-align/2sodB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.461870
/projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t2k-w0.5.mod(21):  Reading nostruct-align/1glaF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-17650/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t2k-w0.5.mod (nostruct-align/1glaF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.740852
/projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t2k-w0.5.mod(22):  Reading nostruct-align/1a2xB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t2k-w0.5.mod (nostruct-align/1a2xB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.652882
/projects/compbio/experiments/models.97/pdb/1c/1ctaA/nostruct-align/1ctaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ctaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-9567/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctaA/nostruct-align/1ctaA.t2k-w0.5.mod (nostruct-align/1ctaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctaA/nostruct-align/1ctaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.804861
/projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t2k-w0.5.mod(22):  Reading nostruct-align/1e2aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24560/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t2k-w0.5.mod (nostruct-align/1e2aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.577871
/projects/compbio/experiments/models.97/pdb/1i/1i1kA/nostruct-align/1i1kA.t2k-w0.5.mod(21):  Reading nostruct-align/1i1kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25016/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1kA/nostruct-align/1i1kA.t2k-w0.5.mod (nostruct-align/1i1kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1kA/nostruct-align/1i1kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.747852
/projects/compbio/experiments/models.97/pdb/1j/1jb1A/nostruct-align/1jb1A.t2k-w0.5.mod(22):  Reading nostruct-align/1jb1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21738/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb1A/nostruct-align/1jb1A.t2k-w0.5.mod (nostruct-align/1jb1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb1A/nostruct-align/1jb1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.891903
/projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t2k-w0.5.mod(22):  Reading nostruct-align/1dpgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11241/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t2k-w0.5.mod (nostruct-align/1dpgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.530855
/projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k-w0.5.mod(22):  Reading nostruct-align/1im5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k-w0.5.mod (nostruct-align/1im5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1im5A/nostruct-align/1im5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.264879
/projects/compbio/experiments/models.97/pdb/1e/1e9kA/nostruct-align/1e9kA.t2k-w0.5.mod(21):  Reading nostruct-align/1e9kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-7530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9kA/nostruct-align/1e9kA.t2k-w0.5.mod (nostruct-align/1e9kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9kA/nostruct-align/1e9kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.707869
/projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-w0.5.mod(22):  Reading nostruct-align/2sak.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-w0.5.mod (nostruct-align/2sak.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.581898
/projects/compbio/experiments/models.97/pdb/1f/1f5qB/nostruct-align/1f5qB.t2k-w0.5.mod(21):  Reading nostruct-align/1f5qB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8512/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5qB/nostruct-align/1f5qB.t2k-w0.5.mod (nostruct-align/1f5qB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5qB/nostruct-align/1f5qB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.759903
/projects/compbio/experiments/models.97/pdb/2n/2nllA/nostruct-align/2nllA.t2k-w0.5.mod(21):  Reading nostruct-align/2nllA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-7105/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nllA/nostruct-align/2nllA.t2k-w0.5.mod (nostruct-align/2nllA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nllA/nostruct-align/2nllA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.332897
/projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t2k-w0.5.mod(21):  Reading nostruct-align/2nllB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t2k-w0.5.mod (nostruct-align/2nllB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.635857
/projects/compbio/experiments/models.97/pdb/1e/1eswA/nostruct-align/1eswA.t2k-w0.5.mod(22):  Reading nostruct-align/1eswA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18844/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eswA/nostruct-align/1eswA.t2k-w0.5.mod (nostruct-align/1eswA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eswA/nostruct-align/1eswA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.806889
/projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t2k-w0.5.mod(21):  Reading nostruct-align/2sas.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-2858/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t2k-w0.5.mod (nostruct-align/2sas.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.393860
/projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t2k-w0.5.mod(21):  Reading nostruct-align/1aa0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26635/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t2k-w0.5.mod (nostruct-align/1aa0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.980862
/projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t2k-w0.5.mod(21):  Reading nostruct-align/1qs2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t2k-w0.5.mod (nostruct-align/1qs2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.871859
/projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t2k-w0.5.mod(22):  Reading nostruct-align/1qqtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t2k-w0.5.mod (nostruct-align/1qqtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.377901
/projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t2k-w0.5.mod(21):  Reading nostruct-align/1osa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-32558/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t2k-w0.5.mod (nostruct-align/1osa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.434872
/projects/compbio/experiments/models.97/pdb/1j/1jofA/nostruct-align/1jofA.t2k-w0.5.mod(22):  Reading nostruct-align/1jofA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25730/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jofA/nostruct-align/1jofA.t2k-w0.5.mod (nostruct-align/1jofA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jofA/nostruct-align/1jofA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.885876
/projects/compbio/experiments/models.97/pdb/1a/1aa2/nostruct-align/1aa2.t2k-w0.5.mod(22):  Reading nostruct-align/1aa2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-31081/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa2/nostruct-align/1aa2.t2k-w0.5.mod (nostruct-align/1aa2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aa2/nostruct-align/1aa2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.850872
/projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t2k-w0.5.mod(21):  Reading nostruct-align/2matA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7520/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t2k-w0.5.mod (nostruct-align/2matA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.115864
/projects/compbio/experiments/models.97/pdb/1a/1aa6/nostruct-align/1aa6.t2k-w0.5.mod(22):  Reading nostruct-align/1aa6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa6/nostruct-align/1aa6.t2k-w0.5.mod (nostruct-align/1aa6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aa6/nostruct-align/1aa6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.941906
/projects/compbio/experiments/models.97/pdb/1h/1hip/nostruct-align/1hip.t2k-w0.5.mod(21):  Reading nostruct-align/1hip.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hip/nostruct-align/1hip.t2k-w0.5.mod (nostruct-align/1hip.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hip/nostruct-align/1hip.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.715878
/projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ag9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t2k-w0.5.mod (nostruct-align/1ag9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.972872
/projects/compbio/experiments/models.97/pdb/1a/1a2yA/nostruct-align/1a2yA.t2k-w0.5.mod(21):  Reading nostruct-align/1a2yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2yA/nostruct-align/1a2yA.t2k-w0.5.mod (nostruct-align/1a2yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a2yA/nostruct-align/1a2yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.908897
/projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t2k-w0.5.mod(21):  Reading nostruct-align/1a2yB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-32123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t2k-w0.5.mod (nostruct-align/1a2yB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.714886
/projects/compbio/experiments/models.97/pdb/1j/1jb2A/nostruct-align/1jb2A.t2k-w0.5.mod(22):  Reading nostruct-align/1jb2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22801/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb2A/nostruct-align/1jb2A.t2k-w0.5.mod (nostruct-align/1jb2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb2A/nostruct-align/1jb2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.284863
/projects/compbio/experiments/models.97/pdb/1h/1hq0A/nostruct-align/1hq0A.t2k-w0.5.mod(22):  Reading nostruct-align/1hq0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20767/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq0A/nostruct-align/1hq0A.t2k-w0.5.mod (nostruct-align/1hq0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hq0A/nostruct-align/1hq0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.055912
/projects/compbio/experiments/models.97/pdb/1e/1e9lA/nostruct-align/1e9lA.t2k-w0.5.mod(21):  Reading nostruct-align/1e9lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14418/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9lA/nostruct-align/1e9lA.t2k-w0.5.mod (nostruct-align/1e9lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9lA/nostruct-align/1e9lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.031891
/projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t2k-w0.5.mod(22):  Reading nostruct-align/1mkaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t2k-w0.5.mod (nostruct-align/1mkaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.632891
/projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t2k-w0.5.mod(21):  Reading nostruct-align/1qjkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20214/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t2k-w0.5.mod (nostruct-align/1qjkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.681856
/projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-w0.5.mod(22):  Reading nostruct-align/1fj2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14042/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-w0.5.mod (nostruct-align/1fj2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fj2A/nostruct-align/1fj2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.563875
/projects/compbio/experiments/models.97/pdb/1j/1jvpP/nostruct-align/1jvpP.t2k-w0.5.mod(22):  Reading nostruct-align/1jvpP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21653/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jvpP/nostruct-align/1jvpP.t2k-w0.5.mod (nostruct-align/1jvpP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jvpP/nostruct-align/1jvpP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.418907
/projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t2k-w0.5.mod(21):  Reading nostruct-align/1vtmP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24507/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t2k-w0.5.mod (nostruct-align/1vtmP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.985859
/projects/compbio/experiments/models.97/pdb/1e/1esxA/nostruct-align/1esxA.t2k-w0.5.mod(21):  Reading nostruct-align/1esxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-23889/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1esxA/nostruct-align/1esxA.t2k-w0.5.mod (nostruct-align/1esxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1esxA/nostruct-align/1esxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.856899
/projects/compbio/experiments/models.97/pdb/1k/1k1aA/nostruct-align/1k1aA.t2k-w0.5.mod(22):  Reading nostruct-align/1k1aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-18296/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1aA/nostruct-align/1k1aA.t2k-w0.5.mod (nostruct-align/1k1aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k1aA/nostruct-align/1k1aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.785877
/projects/compbio/experiments/models.97/pdb/1i/1isaA/nostruct-align/1isaA.t2k-w0.5.mod(21):  Reading nostruct-align/1isaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-15344/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1isaA/nostruct-align/1isaA.t2k-w0.5.mod (nostruct-align/1isaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1isaA/nostruct-align/1isaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.259880
/projects/compbio/experiments/models.97/pdb/1g/1g1xC/nostruct-align/1g1xC.t2k-w0.5.mod(22):  Reading nostruct-align/1g1xC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g1xC/nostruct-align/1g1xC.t2k-w0.5.mod (nostruct-align/1g1xC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g1xC/nostruct-align/1g1xC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.684860
/projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-w0.5.mod(22):  Reading nostruct-align/1d02A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-w0.5.mod (nostruct-align/1d02A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.263870
/projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t2k-w0.5.mod(21):  Reading nostruct-align/2dpg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t2k-w0.5.mod (nostruct-align/2dpg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.635893
/projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t2k-w0.5.mod(21):  Reading nostruct-align/1ab3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14823/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t2k-w0.5.mod (nostruct-align/1ab3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.975864
/projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t2k-w0.5.mod(21):  Reading nostruct-align/1ab4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25348/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t2k-w0.5.mod (nostruct-align/1ab4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.158852
/projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t2k-w0.5.mod(21):  Reading nostruct-align/1hjp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-18480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t2k-w0.5.mod (nostruct-align/1hjp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.641909
/projects/compbio/experiments/models.97/pdb/1k/1k8kA/nostruct-align/1k8kA.t2k-w0.5.mod(22):  Reading nostruct-align/1k8kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19670/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kA/nostruct-align/1k8kA.t2k-w0.5.mod (nostruct-align/1k8kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8kA/nostruct-align/1k8kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.251875
/projects/compbio/experiments/models.97/pdb/1k/1k8kB/nostruct-align/1k8kB.t2k-w0.5.mod(22):  Reading nostruct-align/1k8kB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-22004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kB/nostruct-align/1k8kB.t2k-w0.5.mod (nostruct-align/1k8kB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8kB/nostruct-align/1k8kB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.188858
/projects/compbio/experiments/models.97/pdb/1k/1k8kC/nostruct-align/1k8kC.t2k-w0.5.mod(22):  Reading nostruct-align/1k8kC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-10307/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kC/nostruct-align/1k8kC.t2k-w0.5.mod (nostruct-align/1k8kC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8kC/nostruct-align/1k8kC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.117886
/projects/compbio/experiments/models.97/pdb/1k/1k8kD/nostruct-align/1k8kD.t2k-w0.5.mod(22):  Reading nostruct-align/1k8kD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21039/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kD/nostruct-align/1k8kD.t2k-w0.5.mod (nostruct-align/1k8kD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8kD/nostruct-align/1k8kD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.307858
/projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t2k-w0.5.mod(21):  Reading nostruct-align/1glcG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-32165/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t2k-w0.5.mod (nostruct-align/1glcG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.201857
/projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t2k-w0.5.mod(22):  Reading nostruct-align/1a2zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-1777/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t2k-w0.5.mod (nostruct-align/1a2zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.849890
/projects/compbio/experiments/models.97/pdb/4r/4rxn/nostruct-align/4rxn.t2k-w0.5.mod(21):  Reading nostruct-align/4rxn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29922/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rxn/nostruct-align/4rxn.t2k-w0.5.mod (nostruct-align/4rxn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4r/4rxn/nostruct-align/4rxn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.061895
/projects/compbio/experiments/models.97/pdb/1k/1k8kE/nostruct-align/1k8kE.t2k-w0.5.mod(22):  Reading nostruct-align/1k8kE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kE/nostruct-align/1k8kE.t2k-w0.5.mod (nostruct-align/1k8kE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8kE/nostruct-align/1k8kE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.176895
/projects/compbio/experiments/models.97/pdb/1k/1k8kF/nostruct-align/1k8kF.t2k-w0.5.mod(22):  Reading nostruct-align/1k8kF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kF/nostruct-align/1k8kF.t2k-w0.5.mod (nostruct-align/1k8kF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8kF/nostruct-align/1k8kF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.493906
/projects/compbio/experiments/models.97/pdb/1g/1gsmA/nostruct-align/1gsmA.t2k-w0.5.mod(22):  Reading nostruct-align/1gsmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8799/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gsmA/nostruct-align/1gsmA.t2k-w0.5.mod (nostruct-align/1gsmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gsmA/nostruct-align/1gsmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.380861
/projects/compbio/experiments/models.97/pdb/1k/1k8kG/nostruct-align/1k8kG.t2k-w0.5.mod(22):  Reading nostruct-align/1k8kG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24907/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8kG/nostruct-align/1k8kG.t2k-w0.5.mod (nostruct-align/1k8kG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8kG/nostruct-align/1k8kG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.302900
/projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-w0.5.mod(22):  Reading nostruct-align/1jb3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-w0.5.mod (nostruct-align/1jb3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb3A/nostruct-align/1jb3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.490879
/projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t2k-w0.5.mod(21):  Reading nostruct-align/1aab.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-25325/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t2k-w0.5.mod (nostruct-align/1aab.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.939857
/projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-w0.5.mod(22):  Reading nostruct-align/1hq1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11926/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-w0.5.mod (nostruct-align/1hq1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hq1A/nostruct-align/1hq1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.958851
/projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t2k-w0.5.mod(21):  Reading nostruct-align/1aac.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-6928/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t2k-w0.5.mod (nostruct-align/1aac.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.811853
/projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t2k-w0.5.mod(21):  Reading nostruct-align/1aaf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-9628/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t2k-w0.5.mod (nostruct-align/1aaf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.635864
/projects/compbio/experiments/models.97/pdb/1e/1e9mA/nostruct-align/1e9mA.t2k-w0.5.mod(21):  Reading nostruct-align/1e9mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9mA/nostruct-align/1e9mA.t2k-w0.5.mod (nostruct-align/1e9mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9mA/nostruct-align/1e9mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.589901
/projects/compbio/experiments/models.97/pdb/1f/1fhuA/nostruct-align/1fhuA.t2k-w0.5.mod(22):  Reading nostruct-align/1fhuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7767/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fhuA/nostruct-align/1fhuA.t2k-w0.5.mod (nostruct-align/1fhuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fhuA/nostruct-align/1fhuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.071861
/projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t2k-w0.5.mod(21):  Reading nostruct-align/1aaj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-29841/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t2k-w0.5.mod (nostruct-align/1aaj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.025862
/projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t2k-w0.5.mod(21):  Reading nostruct-align/1hka.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t2k-w0.5.mod (nostruct-align/1hka.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.566883
/projects/compbio/experiments/models.97/pdb/1f/1f5sA/nostruct-align/1f5sA.t2k-w0.5.mod(21):  Reading nostruct-align/1f5sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-11135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5sA/nostruct-align/1f5sA.t2k-w0.5.mod (nostruct-align/1f5sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5sA/nostruct-align/1f5sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.493883
/projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t2k-w0.5.mod(21):  Reading nostruct-align/1ceqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-32418/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t2k-w0.5.mod (nostruct-align/1ceqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.751871
/projects/compbio/experiments/models.97/pdb/1a/1ac0/nostruct-align/1ac0.t2k-w0.5.mod(21):  Reading nostruct-align/1ac0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-5524/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ac0/nostruct-align/1ac0.t2k-w0.5.mod (nostruct-align/1ac0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ac0/nostruct-align/1ac0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.516882
/projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t2k-w0.5.mod(21):  Reading nostruct-align/1qqvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-22126/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t2k-w0.5.mod (nostruct-align/1qqvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.778852
/projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t2k-w0.5.mod(21):  Reading nostruct-align/1xtcC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-7266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t2k-w0.5.mod (nostruct-align/1xtcC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.230873
/projects/compbio/experiments/models.97/pdb/1p/1pa2A/nostruct-align/1pa2A.t2k-w0.5.mod(22):  Reading nostruct-align/1pa2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6220/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pa2A/nostruct-align/1pa2A.t2k-w0.5.mod (nostruct-align/1pa2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pa2A/nostruct-align/1pa2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.422876
/projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t2k-w0.5.mod(21):  Reading nostruct-align/1ac5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-524/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t2k-w0.5.mod (nostruct-align/1ac5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.816906
/projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t2k-w0.5.mod(22):  Reading nostruct-align/1a49A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16850/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t2k-w0.5.mod (nostruct-align/1a49A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.177860
/projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t2k-w0.5.mod(21):  Reading nostruct-align/1ctdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23126/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t2k-w0.5.mod (nostruct-align/1ctdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.804861
/projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k-w0.5.mod(22):  Reading nostruct-align/1i1nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19849/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k-w0.5.mod (nostruct-align/1i1nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1nA/nostruct-align/1i1nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.002876
/projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-w0.5.mod(22):  Reading nostruct-align/1aba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-w0.5.mod (nostruct-align/1aba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.403854
/projects/compbio/experiments/models.97/pdb/1d/1dpjA/nostruct-align/1dpjA.t2k-w0.5.mod(21):  Reading nostruct-align/1dpjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpjA/nostruct-align/1dpjA.t2k-w0.5.mod (nostruct-align/1dpjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpjA/nostruct-align/1dpjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.460871
/projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k-w0.5.mod(22):  Reading nostruct-align/1dpjB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30738/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k-w0.5.mod (nostruct-align/1dpjB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpjB/nostruct-align/1dpjB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.613857
/projects/compbio/experiments/models.97/pdb/1i/1im8A/nostruct-align/1im8A.t2k-w0.5.mod(22):  Reading nostruct-align/1im8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2774/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1im8A/nostruct-align/1im8A.t2k-w0.5.mod (nostruct-align/1im8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1im8A/nostruct-align/1im8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.441908
/projects/compbio/experiments/models.97/pdb/1t/1tmqB/nostruct-align/1tmqB.t2k-w0.5.mod(22):  Reading nostruct-align/1tmqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmqB/nostruct-align/1tmqB.t2k-w0.5.mod (nostruct-align/1tmqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tmqB/nostruct-align/1tmqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.580872
/projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t2k-w0.5.mod(21):  Reading nostruct-align/9wgaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-8500/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t2k-w0.5.mod (nostruct-align/9wgaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.933903
/projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t2k-w0.5.mod(21):  Reading nostruct-align/1mkcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-24046/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t2k-w0.5.mod (nostruct-align/1mkcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.206877
/projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t2k-w0.5.mod(21):  Reading nostruct-align/1hlb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25419/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t2k-w0.5.mod (nostruct-align/1hlb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.864874
/projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t2k-w0.5.mod(21):  Reading nostruct-align/1dwtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-12740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t2k-w0.5.mod (nostruct-align/1dwtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.201893
/projects/compbio/experiments/models.97/pdb/1c/1c2pA/nostruct-align/1c2pA.t2k-w0.5.mod(22):  Reading nostruct-align/1c2pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2pA/nostruct-align/1c2pA.t2k-w0.5.mod (nostruct-align/1c2pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c2pA/nostruct-align/1c2pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.242855
/projects/compbio/experiments/models.97/pdb/1g/1g38A/nostruct-align/1g38A.t2k-w0.5.mod(22):  Reading nostruct-align/1g38A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-791/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g38A/nostruct-align/1g38A.t2k-w0.5.mod (nostruct-align/1g38A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g38A/nostruct-align/1g38A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.958908
/projects/compbio/experiments/models.97/pdb/1e/1eu8A/nostruct-align/1eu8A.t2k-w0.5.mod(21):  Reading nostruct-align/1eu8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14843/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eu8A/nostruct-align/1eu8A.t2k-w0.5.mod (nostruct-align/1eu8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eu8A/nostruct-align/1eu8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.993862
/projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t2k-w0.5.mod(21):  Reading nostruct-align/1iscA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31396/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t2k-w0.5.mod (nostruct-align/1iscA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.237894
/projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t2k-w0.5.mod(22):  Reading nostruct-align/1ad2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15444/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t2k-w0.5.mod (nostruct-align/1ad2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.242897
/projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t2k-w0.5.mod(21):  Reading nostruct-align/2nsyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15532/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t2k-w0.5.mod (nostruct-align/2nsyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.014875
/projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k-w0.5.mod(22):  Reading nostruct-align/2dri.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19161/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k-w0.5.mod (nostruct-align/2dri.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.592863
/projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t2k-w0.5.mod(21):  Reading nostruct-align/1np1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t2k-w0.5.mod (nostruct-align/1np1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.441893
/projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t2k-w0.5.mod(21):  Reading nostruct-align/1abv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1102/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t2k-w0.5.mod (nostruct-align/1abv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.187862
/projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t2k-w0.5.mod(21):  Reading nostruct-align/3vtk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-16901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t2k-w0.5.mod (nostruct-align/3vtk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.514894
/projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-w0.5.mod(22):  Reading nostruct-align/1kkoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-w0.5.mod (nostruct-align/1kkoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kkoA/nostruct-align/1kkoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.872871
/projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t2k-w0.5.mod(21):  Reading nostruct-align/1ad6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-26090/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t2k-w0.5.mod (nostruct-align/1ad6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.342901
/projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t2k-w0.5.mod(21):  Reading nostruct-align/1abz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-1108/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t2k-w0.5.mod (nostruct-align/1abz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.556864
/projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t2k-w0.5.mod(22):  Reading nostruct-align/2hmqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12716/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t2k-w0.5.mod (nostruct-align/2hmqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.958862
/projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t2k-w0.5.mod(21):  Reading nostruct-align/2pldA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-12124/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t2k-w0.5.mod (nostruct-align/2pldA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.693911
/projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-w0.5.mod(22):  Reading nostruct-align/1gsoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14663/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-w0.5.mod (nostruct-align/1gsoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.541882
/projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t2k-w0.5.mod(21):  Reading nostruct-align/1aca.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26823/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t2k-w0.5.mod (nostruct-align/1aca.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.150896
/projects/compbio/experiments/models.97/pdb/1h/1hq3A/nostruct-align/1hq3A.t2k-w0.5.mod(22):  Reading nostruct-align/1hq3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13839/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3A/nostruct-align/1hq3A.t2k-w0.5.mod (nostruct-align/1hq3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hq3A/nostruct-align/1hq3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.536882
/projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t2k-w0.5.mod(22):  Reading nostruct-align/1acc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32606/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t2k-w0.5.mod (nostruct-align/1acc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.870855
/projects/compbio/experiments/models.97/pdb/1h/1hq3B/nostruct-align/1hq3B.t2k-w0.5.mod(22):  Reading nostruct-align/1hq3B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3B/nostruct-align/1hq3B.t2k-w0.5.mod (nostruct-align/1hq3B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hq3B/nostruct-align/1hq3B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.328888
/projects/compbio/experiments/models.97/pdb/1h/1hq3C/nostruct-align/1hq3C.t2k-w0.5.mod(22):  Reading nostruct-align/1hq3C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-22708/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3C/nostruct-align/1hq3C.t2k-w0.5.mod (nostruct-align/1hq3C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hq3C/nostruct-align/1hq3C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.541887
/projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t2k-w0.5.mod(21):  Reading nostruct-align/1acf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-23529/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t2k-w0.5.mod (nostruct-align/1acf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.162874
/projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t2k-w0.5.mod(21):  Reading nostruct-align/1elqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11812/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t2k-w0.5.mod (nostruct-align/1elqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.416882
/projects/compbio/experiments/models.97/pdb/1h/1hq3D/nostruct-align/1hq3D.t2k-w0.5.mod(21):  Reading nostruct-align/1hq3D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-30112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq3D/nostruct-align/1hq3D.t2k-w0.5.mod (nostruct-align/1hq3D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hq3D/nostruct-align/1hq3D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.796879
/projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-w0.5.mod(22):  Reading nostruct-align/2trxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-w0.5.mod (nostruct-align/2trxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.872879
/projects/compbio/experiments/models.97/pdb/1a/1aci/nostruct-align/1aci.t2k-w0.5.mod(21):  Reading nostruct-align/1aci.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-8711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aci/nostruct-align/1aci.t2k-w0.5.mod (nostruct-align/1aci.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aci/nostruct-align/1aci.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.847853
/projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t2k-w0.5.mod(21):  Reading nostruct-align/1hma.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16545/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t2k-w0.5.mod (nostruct-align/1hma.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.393875
/projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-w0.5.mod(22):  Reading nostruct-align/3vub.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-w0.5.mod (nostruct-align/3vub.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.188890
/projects/compbio/experiments/models.97/pdb/1h/1hme/nostruct-align/1hme.t2k-w0.5.mod(21):  Reading nostruct-align/1hme.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-23802/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hme/nostruct-align/1hme.t2k-w0.5.mod (nostruct-align/1hme.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hme/nostruct-align/1hme.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.509851
/projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t2k-w0.5.mod(21):  Reading nostruct-align/1acp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t2k-w0.5.mod (nostruct-align/1acp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.870855
/projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t2k-w0.5.mod(22):  Reading nostruct-align/1bpwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t2k-w0.5.mod (nostruct-align/1bpwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.383881
/projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t2k-w0.5.mod(21):  Reading nostruct-align/1rh2F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-19649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t2k-w0.5.mod (nostruct-align/1rh2F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.133883
/projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t2k-w0.5.mod(21):  Reading nostruct-align/1hml.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t2k-w0.5.mod (nostruct-align/1hml.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.943851
/projects/compbio/experiments/models.97/pdb/1a/1acw/nostruct-align/1acw.t2k-w0.5.mod(21):  Reading nostruct-align/1acw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-5282/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acw/nostruct-align/1acw.t2k-w0.5.mod (nostruct-align/1acw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1acw/nostruct-align/1acw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.022863
/projects/compbio/experiments/models.97/pdb/1a/1acx/nostruct-align/1acx.t2k-w0.5.mod(21):  Reading nostruct-align/1acx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-30945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acx/nostruct-align/1acx.t2k-w0.5.mod (nostruct-align/1acx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1acx/nostruct-align/1acx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.817871
/projects/compbio/experiments/models.97/pdb/1a/1ae7/nostruct-align/1ae7.t2k-w0.5.mod(21):  Reading nostruct-align/1ae7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-9284/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ae7/nostruct-align/1ae7.t2k-w0.5.mod (nostruct-align/1ae7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ae7/nostruct-align/1ae7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.075871
/projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t2k-w0.5.mod(21):  Reading nostruct-align/1acz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-25481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t2k-w0.5.mod (nostruct-align/1acz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.516882
/projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t2k-w0.5.mod(21):  Reading nostruct-align/1hms.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2289/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t2k-w0.5.mod (nostruct-align/1hms.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.248905
/projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t2k-w0.5.mod(21):  Reading nostruct-align/1hmt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-28495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t2k-w0.5.mod (nostruct-align/1hmt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.202890
/projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t2k-w0.5.mod(21):  Reading nostruct-align/2pleA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-12360/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t2k-w0.5.mod (nostruct-align/2pleA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.688866
/projects/compbio/experiments/models.97/pdb/1i/1idrA/nostruct-align/1idrA.t2k-w0.5.mod(22):  Reading nostruct-align/1idrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idrA/nostruct-align/1idrA.t2k-w0.5.mod (nostruct-align/1idrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1idrA/nostruct-align/1idrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.559889
/projects/compbio/experiments/models.97/pdb/1j/1jx2B/nostruct-align/1jx2B.t2k-w0.5.mod(22):  Reading nostruct-align/1jx2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jx2B/nostruct-align/1jx2B.t2k-w0.5.mod (nostruct-align/1jx2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jx2B/nostruct-align/1jx2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.023890
/projects/compbio/experiments/models.97/pdb/1e/1e2fA/nostruct-align/1e2fA.t2k-w0.5.mod(21):  Reading nostruct-align/1e2fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12304/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2fA/nostruct-align/1e2fA.t2k-w0.5.mod (nostruct-align/1e2fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2fA/nostruct-align/1e2fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.936895
/projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t2k-w0.5.mod(21):  Reading nostruct-align/2sfa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-18029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t2k-w0.5.mod (nostruct-align/2sfa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.871897
/projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t2k-w0.5.mod(22):  Reading nostruct-align/1hmy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-23321/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t2k-w0.5.mod (nostruct-align/1hmy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.526867
/projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t2k-w0.5.mod(21):  Reading nostruct-align/1add.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-21914/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t2k-w0.5.mod (nostruct-align/1add.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.464905
/projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t2k-w0.5.mod(21):  Reading nostruct-align/1elrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-32705/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t2k-w0.5.mod (nostruct-align/1elrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.098883
/projects/compbio/experiments/models.97/pdb/1b/1binA/nostruct-align/1binA.t2k-w0.5.mod(22):  Reading nostruct-align/1binA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6267/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1binA/nostruct-align/1binA.t2k-w0.5.mod (nostruct-align/1binA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1binA/nostruct-align/1binA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.604874
/projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-w0.5.mod(22):  Reading nostruct-align/1f74A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31249/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-w0.5.mod (nostruct-align/1f74A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f74A/nostruct-align/1f74A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.534885
/projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-w0.5.mod(21):  Reading nostruct-align/1f5vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6410/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-w0.5.mod (nostruct-align/1f5vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5vA/nostruct-align/1f5vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.377865
/projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t2k-w0.5.mod(21):  Reading nostruct-align/1cg2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-27127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t2k-w0.5.mod (nostruct-align/1cg2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.660854
/projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t2k-w0.5.mod(21):  Reading nostruct-align/1c2rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t2k-w0.5.mod (nostruct-align/1c2rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.676884
/projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t2k-w0.5.mod(21):  Reading nostruct-align/1adn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17744/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t2k-w0.5.mod (nostruct-align/1adn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.963865
/projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t2k-w0.5.mod(21):  Reading nostruct-align/1hnf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1534/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t2k-w0.5.mod (nostruct-align/1hnf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.012871
/projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-w0.5.mod(22):  Reading nostruct-align/1k1eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-w0.5.mod (nostruct-align/1k1eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k1eA/nostruct-align/1k1eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.634857
/projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t2k-w0.5.mod(22):  Reading nostruct-align/1mroA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29200/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t2k-w0.5.mod (nostruct-align/1mroA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.187889
/projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t2k-w0.5.mod(21):  Reading nostruct-align/1adr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10308/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t2k-w0.5.mod (nostruct-align/1adr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.043879
/projects/compbio/experiments/models.97/pdb/1d/1dazC/nostruct-align/1dazC.t2k-w0.5.mod(22):  Reading nostruct-align/1dazC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18288/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dazC/nostruct-align/1dazC.t2k-w0.5.mod (nostruct-align/1dazC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dazC/nostruct-align/1dazC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.022882
/projects/compbio/experiments/models.97/pdb/1q/1qqyA/nostruct-align/1qqyA.t2k-w0.5.mod(21):  Reading nostruct-align/1qqyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-20425/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qqyA/nostruct-align/1qqyA.t2k-w0.5.mod (nostruct-align/1qqyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qqyA/nostruct-align/1qqyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.109894
/projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t2k-w0.5.mod(21):  Reading nostruct-align/1oxa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2976/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t2k-w0.5.mod (nostruct-align/1oxa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.191874
/projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t2k-w0.5.mod(21):  Reading nostruct-align/1mroB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-18787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t2k-w0.5.mod (nostruct-align/1mroB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.308851
/projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t2k-w0.5.mod(22):  Reading nostruct-align/1ads.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14549/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t2k-w0.5.mod (nostruct-align/1ads.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.751905
/projects/compbio/experiments/models.97/pdb/1a/1adt/nostruct-align/1adt.t2k-w0.5.mod(22):  Reading nostruct-align/1adt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adt/nostruct-align/1adt.t2k-w0.5.mod (nostruct-align/1adt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1adt/nostruct-align/1adt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.259863
/projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t2k-w0.5.mod(21):  Reading nostruct-align/1mroC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-8817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t2k-w0.5.mod (nostruct-align/1mroC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.168854
/projects/compbio/experiments/models.97/pdb/1a/1af3/nostruct-align/1af3.t2k-w0.5.mod(22):  Reading nostruct-align/1af3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-4643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af3/nostruct-align/1af3.t2k-w0.5.mod (nostruct-align/1af3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1af3/nostruct-align/1af3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.110903
/projects/compbio/experiments/models.97/pdb/1a/1af5/nostruct-align/1af5.t2k-w0.5.mod(21):  Reading nostruct-align/1af5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-25637/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af5/nostruct-align/1af5.t2k-w0.5.mod (nostruct-align/1af5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1af5/nostruct-align/1af5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.532854
/projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t2k-w0.5.mod(21):  Reading nostruct-align/1adx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-7636/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t2k-w0.5.mod (nostruct-align/1adx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.559910
/projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t2k-w0.5.mod(22):  Reading nostruct-align/1af7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17872/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t2k-w0.5.mod (nostruct-align/1af7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.862907
/projects/compbio/experiments/models.97/pdb/1a/1af8/nostruct-align/1af8.t2k-w0.5.mod(21):  Reading nostruct-align/1af8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-25033/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1af8/nostruct-align/1af8.t2k-w0.5.mod (nostruct-align/1af8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1af8/nostruct-align/1af8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.918900
/projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t2k-w0.5.mod(21):  Reading nostruct-align/1hnr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-4139/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t2k-w0.5.mod (nostruct-align/1hnr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.710854
/projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t2k-w0.5.mod(22):  Reading nostruct-align/1bxaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10372/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t2k-w0.5.mod (nostruct-align/1bxaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.672859
/projects/compbio/experiments/models.97/pdb/1l/1li5A/nostruct-align/1li5A.t2k-w0.5.mod(22):  Reading nostruct-align/1li5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1li5A/nostruct-align/1li5A.t2k-w0.5.mod (nostruct-align/1li5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1li5A/nostruct-align/1li5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.531860
/projects/compbio/experiments/models.97/pdb/1f/1fwkA/nostruct-align/1fwkA.t2k-w0.5.mod(21):  Reading nostruct-align/1fwkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-15352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwkA/nostruct-align/1fwkA.t2k-w0.5.mod (nostruct-align/1fwkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwkA/nostruct-align/1fwkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.436893
/projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t2k-w0.5.mod(21):  Reading nostruct-align/1d6aB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-24973/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t2k-w0.5.mod (nostruct-align/1d6aB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.404858
/projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t2k-w0.5.mod(21):  Reading nostruct-align/1wab.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2630/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t2k-w0.5.mod (nostruct-align/1wab.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.639862
/projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t2k-w0.5.mod(22):  Reading nostruct-align/2dtr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26826/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t2k-w0.5.mod (nostruct-align/2dtr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.594912
/projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t2k-w0.5.mod(21):  Reading nostruct-align/1if1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-549/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t2k-w0.5.mod (nostruct-align/1if1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.387899
/projects/compbio/experiments/models.97/pdb/1i/1idsA/nostruct-align/1idsA.t2k-w0.5.mod(21):  Reading nostruct-align/1idsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idsA/nostruct-align/1idsA.t2k-w0.5.mod (nostruct-align/1idsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1idsA/nostruct-align/1idsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.877855
/projects/compbio/experiments/models.97/pdb/1e/1e2gA/nostruct-align/1e2gA.t2k-w0.5.mod(21):  Reading nostruct-align/1e2gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-4238/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2gA/nostruct-align/1e2gA.t2k-w0.5.mod (nostruct-align/1e2gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2gA/nostruct-align/1e2gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.067911
/projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t2k-w0.5.mod(21):  Reading nostruct-align/1wad.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-7639/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t2k-w0.5.mod (nostruct-align/1wad.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.069880
/projects/compbio/experiments/models.97/pdb/1i/1i1qA/nostruct-align/1i1qA.t2k-w0.5.mod(22):  Reading nostruct-align/1i1qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1302/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1qA/nostruct-align/1i1qA.t2k-w0.5.mod (nostruct-align/1i1qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1qA/nostruct-align/1i1qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.493864
/projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t2k-w0.5.mod(22):  Reading nostruct-align/2sga.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-6114/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t2k-w0.5.mod (nostruct-align/2sga.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.055859
/projects/compbio/experiments/models.97/pdb/1i/1i1qB/nostruct-align/1i1qB.t2k-w0.5.mod(21):  Reading nostruct-align/1i1qB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1qB/nostruct-align/1i1qB.t2k-w0.5.mod (nostruct-align/1i1qB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1qB/nostruct-align/1i1qB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.120905
/projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k-w0.5.mod(21):  Reading nostruct-align/1faoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-29776/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k-w0.5.mod (nostruct-align/1faoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1faoA/nostruct-align/1faoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.596903
/projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t2k-w0.5.mod(21):  Reading nostruct-align/1ubpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3337/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t2k-w0.5.mod (nostruct-align/1ubpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.240875
/projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t2k-w0.5.mod(21):  Reading nostruct-align/1ordA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-3868/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t2k-w0.5.mod (nostruct-align/1ordA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.825890
/projects/compbio/experiments/models.97/pdb/1j/1jb7A/nostruct-align/1jb7A.t2k-w0.5.mod(22):  Reading nostruct-align/1jb7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-16186/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb7A/nostruct-align/1jb7A.t2k-w0.5.mod (nostruct-align/1jb7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb7A/nostruct-align/1jb7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.925896
/projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t2k-w0.5.mod(21):  Reading nostruct-align/1ubpB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8761/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t2k-w0.5.mod (nostruct-align/1ubpB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.895889
/projects/compbio/experiments/models.97/pdb/1j/1jb7B/nostruct-align/1jb7B.t2k-w0.5.mod(21):  Reading nostruct-align/1jb7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21637/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb7B/nostruct-align/1jb7B.t2k-w0.5.mod (nostruct-align/1jb7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb7B/nostruct-align/1jb7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.550890
/projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t2k-w0.5.mod(21):  Reading nostruct-align/1hp8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t2k-w0.5.mod (nostruct-align/1hp8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.573874
/projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t2k-w0.5.mod(22):  Reading nostruct-align/1ubpC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30713/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t2k-w0.5.mod (nostruct-align/1ubpC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.406897
/projects/compbio/experiments/models.97/pdb/1h/1howA/nostruct-align/1howA.t2k-w0.5.mod(22):  Reading nostruct-align/1howA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-11157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1howA/nostruct-align/1howA.t2k-w0.5.mod (nostruct-align/1howA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1howA/nostruct-align/1howA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.440901
/projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t2k-w0.5.mod(22):  Reading nostruct-align/2pspA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t2k-w0.5.mod (nostruct-align/2pspA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.157883
/projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-w0.5.mod(22):  Reading nostruct-align/1qjpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3597/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-w0.5.mod (nostruct-align/1qjpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjpA/nostruct-align/1qjpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.936859
/projects/compbio/experiments/models.97/pdb/1f/1fj7A/nostruct-align/1fj7A.t2k-w0.5.mod(21):  Reading nostruct-align/1fj7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-13006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fj7A/nostruct-align/1fj7A.t2k-w0.5.mod (nostruct-align/1fj7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fj7A/nostruct-align/1fj7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.174887
/projects/compbio/experiments/models.97/pdb/1f/1f75A/nostruct-align/1f75A.t2k-w0.5.mod(21):  Reading nostruct-align/1f75A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10621/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f75A/nostruct-align/1f75A.t2k-w0.5.mod (nostruct-align/1f75A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f75A/nostruct-align/1f75A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.211895
/projects/compbio/experiments/models.97/pdb/1f/1f5wA/nostruct-align/1f5wA.t2k-w0.5.mod(21):  Reading nostruct-align/1f5wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5wA/nostruct-align/1f5wA.t2k-w0.5.mod (nostruct-align/1f5wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5wA/nostruct-align/1f5wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.160887
/projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-w0.5.mod(22):  Reading nostruct-align/1dy5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-w0.5.mod (nostruct-align/1dy5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.023869
/projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-w0.5.mod(22):  Reading nostruct-align/2nlrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29128/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-w0.5.mod (nostruct-align/2nlrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.657907
/projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t2k-w0.5.mod(21):  Reading nostruct-align/1nglA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18615/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t2k-w0.5.mod (nostruct-align/1nglA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.878862
/projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t2k-w0.5.mod(21):  Reading nostruct-align/1ceuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-15593/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t2k-w0.5.mod (nostruct-align/1ceuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.178888
/projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t2k-w0.5.mod(21):  Reading nostruct-align/1av1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13068/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t2k-w0.5.mod (nostruct-align/1av1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.569908
/projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t2k-w0.5.mod(22):  Reading nostruct-align/1hoe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-14718/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t2k-w0.5.mod (nostruct-align/1hoe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.600899
/projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t2k-w0.5.mod(21):  Reading nostruct-align/2kinA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t2k-w0.5.mod (nostruct-align/2kinA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.420881
/projects/compbio/experiments/models.97/pdb/1k/1k1fA/nostruct-align/1k1fA.t2k-w0.5.mod(22):  Reading nostruct-align/1k1fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k1fA/nostruct-align/1k1fA.t2k-w0.5.mod (nostruct-align/1k1fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k1fA/nostruct-align/1k1fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.848850
/projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t2k-w0.5.mod(21):  Reading nostruct-align/2kinB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3155/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t2k-w0.5.mod (nostruct-align/2kinB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.400890
/projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t2k-w0.5.mod(21):  Reading nostruct-align/1zeiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-14540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t2k-w0.5.mod (nostruct-align/1zeiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.083899
/projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t2k-w0.5.mod(22):  Reading nostruct-align/1aep.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t2k-w0.5.mod (nostruct-align/1aep.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.888851
/projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t2k-w0.5.mod(21):  Reading nostruct-align/2ohxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-20667/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t2k-w0.5.mod (nostruct-align/2ohxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.501875
/projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t2k-w0.5.mod(22):  Reading nostruct-align/1bpyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-10733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t2k-w0.5.mod (nostruct-align/1bpyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.395864
/projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t2k-w0.5.mod(21):  Reading nostruct-align/1ocrC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-6165/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t2k-w0.5.mod (nostruct-align/1ocrC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.530878
/projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t2k-w0.5.mod(21):  Reading nostruct-align/1oya.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-28815/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t2k-w0.5.mod (nostruct-align/1oya.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.326881
/projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t2k-w0.5.mod(21):  Reading nostruct-align/1ocrD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t2k-w0.5.mod (nostruct-align/1ocrD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.153875
/projects/compbio/experiments/models.97/pdb/1a/1ag2/nostruct-align/1ag2.t2k-w0.5.mod(21):  Reading nostruct-align/1ag2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-25993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag2/nostruct-align/1ag2.t2k-w0.5.mod (nostruct-align/1ag2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ag2/nostruct-align/1ag2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.555906
/projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t2k-w0.5.mod(21):  Reading nostruct-align/1oyc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-6668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t2k-w0.5.mod (nostruct-align/1oyc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.343885
/projects/compbio/experiments/models.97/pdb/3t/3timA/nostruct-align/3timA.t2k-w0.5.mod(21):  Reading nostruct-align/3timA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-4269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3t/3timA/nostruct-align/3timA.t2k-w0.5.mod (nostruct-align/3timA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3t/3timA/nostruct-align/3timA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.888861
/projects/compbio/experiments/models.97/pdb/1n/1np4A/nostruct-align/1np4A.t2k-w0.5.mod(21):  Reading nostruct-align/1np4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10262/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1np4A/nostruct-align/1np4A.t2k-w0.5.mod (nostruct-align/1np4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1np4A/nostruct-align/1np4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.559898
/projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t2k-w0.5.mod(21):  Reading nostruct-align/1ag4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t2k-w0.5.mod (nostruct-align/1ag4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.522854
/projects/compbio/experiments/models.97/pdb/1a/1aew/nostruct-align/1aew.t2k-w0.5.mod(21):  Reading nostruct-align/1aew.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7826/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aew/nostruct-align/1aew.t2k-w0.5.mod (nostruct-align/1aew.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aew/nostruct-align/1aew.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.034855
/projects/compbio/experiments/models.97/pdb/1a/1ag6/nostruct-align/1ag6.t2k-w0.5.mod(21):  Reading nostruct-align/1ag6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag6/nostruct-align/1ag6.t2k-w0.5.mod (nostruct-align/1ag6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ag6/nostruct-align/1ag6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.076887
/projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t2k-w0.5.mod(22):  Reading nostruct-align/1ag7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22221/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t2k-w0.5.mod (nostruct-align/1ag7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.529858
/projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t2k-w0.5.mod(22):  Reading nostruct-align/2dnjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8613/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t2k-w0.5.mod (nostruct-align/2dnjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.538887
/projects/compbio/experiments/models.97/pdb/1h/1hhnA/nostruct-align/1hhnA.t2k-w0.5.mod(21):  Reading nostruct-align/1hhnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10791/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hhnA/nostruct-align/1hhnA.t2k-w0.5.mod (nostruct-align/1hhnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hhnA/nostruct-align/1hhnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.817873
/projects/compbio/experiments/models.97/pdb/1d/1d6bA/nostruct-align/1d6bA.t2k-w0.5.mod(21):  Reading nostruct-align/1d6bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-6881/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6bA/nostruct-align/1d6bA.t2k-w0.5.mod (nostruct-align/1d6bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d6bA/nostruct-align/1d6bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.138887
/projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k-w0.5.mod(21):  Reading nostruct-align/1wba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23396/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k-w0.5.mod (nostruct-align/1wba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.295853
/projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-w0.5.mod(22):  Reading nostruct-align/1jx4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14567/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-w0.5.mod (nostruct-align/1jx4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jx4A/nostruct-align/1jx4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.357906
/projects/compbio/experiments/models.97/pdb/1e/1eejA/nostruct-align/1eejA.t2k-w0.5.mod(22):  Reading nostruct-align/1eejA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15889/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eejA/nostruct-align/1eejA.t2k-w0.5.mod (nostruct-align/1eejA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eejA/nostruct-align/1eejA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.378895
/projects/compbio/experiments/models.97/pdb/1i/1i1rB/nostruct-align/1i1rB.t2k-w0.5.mod(21):  Reading nostruct-align/1i1rB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10536/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i1rB/nostruct-align/1i1rB.t2k-w0.5.mod (nostruct-align/1i1rB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i1rB/nostruct-align/1i1rB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.032906
/projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t2k-w0.5.mod(21):  Reading nostruct-align/1pnkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-23320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t2k-w0.5.mod (nostruct-align/1pnkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.165894
/projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k-w0.5.mod(22):  Reading nostruct-align/1en2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k-w0.5.mod (nostruct-align/1en2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1en2A/nostruct-align/1en2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.247887
/projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t2k-w0.5.mod(21):  Reading nostruct-align/1pnkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-18263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t2k-w0.5.mod (nostruct-align/1pnkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.871897
/projects/compbio/experiments/models.97/pdb/1e/1e9rA/nostruct-align/1e9rA.t2k-w0.5.mod(22):  Reading nostruct-align/1e9rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20428/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9rA/nostruct-align/1e9rA.t2k-w0.5.mod (nostruct-align/1e9rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9rA/nostruct-align/1e9rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.147861
/projects/compbio/experiments/models.97/pdb/1a/1afi/nostruct-align/1afi.t2k-w0.5.mod(21):  Reading nostruct-align/1afi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-29496/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afi/nostruct-align/1afi.t2k-w0.5.mod (nostruct-align/1afi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1afi/nostruct-align/1afi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.760855
/projects/compbio/experiments/models.97/pdb/1f/1f5xA/nostruct-align/1f5xA.t2k-w0.5.mod(21):  Reading nostruct-align/1f5xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-7935/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5xA/nostruct-align/1f5xA.t2k-w0.5.mod (nostruct-align/1f5xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5xA/nostruct-align/1f5xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.617882
/projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t2k-w0.5.mod(21):  Reading nostruct-align/1afp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15054/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t2k-w0.5.mod (nostruct-align/1afp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.901873
/projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t2k-w0.5.mod(21):  Reading nostruct-align/1hph.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-4496/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t2k-w0.5.mod (nostruct-align/1hph.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.904886
/projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k-w0.5.mod(21):  Reading nostruct-align/1hpi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-31606/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k-w0.5.mod (nostruct-align/1hpi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.315893
/projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t2k-w0.5.mod(21):  Reading nostruct-align/1ah1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t2k-w0.5.mod (nostruct-align/1ah1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.959896
/projects/compbio/experiments/models.97/pdb/8r/8rucA/nostruct-align/8rucA.t2k-w0.5.mod(22):  Reading nostruct-align/8rucA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-26991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8r/8rucA/nostruct-align/8rucA.t2k-w0.5.mod (nostruct-align/8rucA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8r/8rucA/nostruct-align/8rucA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.658911
/projects/compbio/experiments/models.97/pdb/1a/1ah6/nostruct-align/1ah6.t2k-w0.5.mod(22):  Reading nostruct-align/1ah6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22492/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah6/nostruct-align/1ah6.t2k-w0.5.mod (nostruct-align/1ah6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ah6/nostruct-align/1ah6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.234879
/projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-w0.5.mod(22):  Reading nostruct-align/1ah7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6349/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-w0.5.mod (nostruct-align/1ah7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.746904
/projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t2k-w0.5.mod(21):  Reading nostruct-align/1ah9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-17408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t2k-w0.5.mod (nostruct-align/1ah9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.293909
/projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k-w0.5.mod(22):  Reading nostruct-align/3caoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k-w0.5.mod (nostruct-align/3caoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3caoA/nostruct-align/3caoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.195850
/projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t2k-w0.5.mod(21):  Reading nostruct-align/8rucI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-26320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t2k-w0.5.mod (nostruct-align/8rucI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.527866
/projects/compbio/experiments/models.97/pdb/1i/1i31A/nostruct-align/1i31A.t2k-w0.5.mod(22):  Reading nostruct-align/1i31A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i31A/nostruct-align/1i31A.t2k-w0.5.mod (nostruct-align/1i31A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i31A/nostruct-align/1i31A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.791904
/projects/compbio/experiments/models.97/pdb/1j/1jb9A/nostruct-align/1jb9A.t2k-w0.5.mod(21):  Reading nostruct-align/1jb9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19572/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jb9A/nostruct-align/1jb9A.t2k-w0.5.mod (nostruct-align/1jb9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jb9A/nostruct-align/1jb9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.849899
/projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t2k-w0.5.mod(21):  Reading nostruct-align/1hpy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17134/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t2k-w0.5.mod (nostruct-align/1hpy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.694889
/projects/compbio/experiments/models.97/pdb/3l/3lynA/nostruct-align/3lynA.t2k-w0.5.mod(21):  Reading nostruct-align/3lynA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3l/3lynA/nostruct-align/3lynA.t2k-w0.5.mod (nostruct-align/3lynA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3l/3lynA/nostruct-align/3lynA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.979908
/projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-w0.5.mod(22):  Reading nostruct-align/1eluA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-w0.5.mod (nostruct-align/1eluA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eluA/nostruct-align/1eluA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.296856
/projects/compbio/experiments/models.97/pdb/1e/1eluB/nostruct-align/1eluB.t2k-w0.5.mod(22):  Reading nostruct-align/1eluB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-21482/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eluB/nostruct-align/1eluB.t2k-w0.5.mod (nostruct-align/1eluB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eluB/nostruct-align/1eluB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.334898
/projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t2k-w0.5.mod(21):  Reading nostruct-align/1agg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15076/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t2k-w0.5.mod (nostruct-align/1agg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.131870
/projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ql0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25682/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-w0.5.mod (nostruct-align/1ql0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1ql0A/nostruct-align/1ql0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.671852
/projects/compbio/experiments/models.97/pdb/1a/1agi/nostruct-align/1agi.t2k-w0.5.mod(21):  Reading nostruct-align/1agi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-8400/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agi/nostruct-align/1agi.t2k-w0.5.mod (nostruct-align/1agi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agi/nostruct-align/1agi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.007856
/projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t2k-w0.5.mod(21):  Reading nostruct-align/2sil.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-16378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t2k-w0.5.mod (nostruct-align/2sil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.071865
/projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k-w0.5.mod(22):  Reading nostruct-align/1jhdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30621/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k-w0.5.mod (nostruct-align/1jhdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jhdA/nostruct-align/1jhdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.815910
/projects/compbio/experiments/models.97/pdb/1f/1f5yA/nostruct-align/1f5yA.t2k-w0.5.mod(21):  Reading nostruct-align/1f5yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-24054/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f5yA/nostruct-align/1f5yA.t2k-w0.5.mod (nostruct-align/1f5yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f5yA/nostruct-align/1f5yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.119864
/projects/compbio/experiments/models.97/pdb/1a/1afb1/nostruct-align/1afb1.t2k-w0.5.mod(22):  Reading nostruct-align/1afb1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-29414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afb1/nostruct-align/1afb1.t2k-w0.5.mod (nostruct-align/1afb1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1afb1/nostruct-align/1afb1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.431890
/projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k-w0.5.mod(21):  Reading nostruct-align/1cg5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-32168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k-w0.5.mod (nostruct-align/1cg5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.052895
/projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t2k-w0.5.mod(21):  Reading nostruct-align/1c2uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9273/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t2k-w0.5.mod (nostruct-align/1c2uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.612860
/projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k-w0.5.mod(22):  Reading nostruct-align/1cg5B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27499/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k-w0.5.mod (nostruct-align/1cg5B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.326860
/projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t2k-w0.5.mod(21):  Reading nostruct-align/1vfaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15193/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t2k-w0.5.mod (nostruct-align/1vfaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.712858
/projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t2k-w0.5.mod(21):  Reading nostruct-align/1octC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-17091/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t2k-w0.5.mod (nostruct-align/1octC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.196911
/projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t2k-w0.5.mod(21):  Reading nostruct-align/1hqi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t2k-w0.5.mod (nostruct-align/1hqi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.707869
/projects/compbio/experiments/models.97/pdb/1d/1d09B/nostruct-align/1d09B.t2k-w0.5.mod(22):  Reading nostruct-align/1d09B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23411/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d09B/nostruct-align/1d09B.t2k-w0.5.mod (nostruct-align/1d09B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d09B/nostruct-align/1d09B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.704851
/projects/compbio/experiments/models.97/pdb/1a/1agt/nostruct-align/1agt.t2k-w0.5.mod(21):  Reading nostruct-align/1agt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16192/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agt/nostruct-align/1agt.t2k-w0.5.mod (nostruct-align/1agt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agt/nostruct-align/1agt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.295881
/projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t2k-w0.5.mod(22):  Reading nostruct-align/1cewI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t2k-w0.5.mod (nostruct-align/1cewI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.527855
/projects/compbio/experiments/models.97/pdb/1k/1kktA/nostruct-align/1kktA.t2k-w0.5.mod(22):  Reading nostruct-align/1kktA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-4472/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kktA/nostruct-align/1kktA.t2k-w0.5.mod (nostruct-align/1kktA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kktA/nostruct-align/1kktA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.208860
/projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t2k-w0.5.mod(21):  Reading nostruct-align/1agx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-12474/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t2k-w0.5.mod (nostruct-align/1agx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.040909
/projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t2k-w0.5.mod(21):  Reading nostruct-align/1difA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-7518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t2k-w0.5.mod (nostruct-align/1difA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.533880
/projects/compbio/experiments/models.97/pdb/1k/1k8rB/nostruct-align/1k8rB.t2k-w0.5.mod(22):  Reading nostruct-align/1k8rB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-5333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8rB/nostruct-align/1k8rB.t2k-w0.5.mod (nostruct-align/1k8rB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8rB/nostruct-align/1k8rB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.345863
/projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t2k-w0.5.mod(21):  Reading nostruct-align/1bxdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t2k-w0.5.mod (nostruct-align/1bxdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.646879
/projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-w0.5.mod(22):  Reading nostruct-align/1jx6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-8178/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-w0.5.mod (nostruct-align/1jx6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jx6A/nostruct-align/1jx6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.346897
/projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k-w0.5.mod(21):  Reading nostruct-align/1bbhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-27534/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k-w0.5.mod (nostruct-align/1bbhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.254889
/projects/compbio/experiments/models.97/pdb/1q/1qciA/nostruct-align/1qciA.t2k-w0.5.mod(21):  Reading nostruct-align/1qciA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-29994/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qciA/nostruct-align/1qciA.t2k-w0.5.mod (nostruct-align/1qciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qciA/nostruct-align/1qciA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.565874
/projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t2k-w0.5.mod(21):  Reading nostruct-align/1dppA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-15264/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t2k-w0.5.mod (nostruct-align/1dppA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.356865
/projects/compbio/experiments/models.97/pdb/1h/1hq8A/nostruct-align/1hq8A.t2k-w0.5.mod(21):  Reading nostruct-align/1hq8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hq8A/nostruct-align/1hq8A.t2k-w0.5.mod (nostruct-align/1hq8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hq8A/nostruct-align/1hq8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.766890
/projects/compbio/experiments/models.97/pdb/1h/1hozA/nostruct-align/1hozA.t2k-w0.5.mod(22):  Reading nostruct-align/1hozA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31284/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hozA/nostruct-align/1hozA.t2k-w0.5.mod (nostruct-align/1hozA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hozA/nostruct-align/1hozA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.725882
/projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k-w0.5.mod(21):  Reading nostruct-align/1elvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6790/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k-w0.5.mod (nostruct-align/1elvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1elvA/nostruct-align/1elvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.864862
/projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t2k-w0.5.mod(21):  Reading nostruct-align/1ql1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8560/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t2k-w0.5.mod (nostruct-align/1ql1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.649897
/projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t2k-w0.5.mod(22):  Reading nostruct-align/1hra.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t2k-w0.5.mod (nostruct-align/1hra.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.633894
/projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t2k-w0.5.mod(21):  Reading nostruct-align/1ahl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-14899/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t2k-w0.5.mod (nostruct-align/1ahl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.655851
/projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k-w0.5.mod(21):  Reading nostruct-align/1c44A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-28416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k-w0.5.mod (nostruct-align/1c44A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c44A/nostruct-align/1c44A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.275862
/projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t2k-w0.5.mod(21):  Reading nostruct-align/1ahm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t2k-w0.5.mod (nostruct-align/1ahm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.720881
/projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t2k-w0.5.mod(21):  Reading nostruct-align/1hre.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-8043/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t2k-w0.5.mod (nostruct-align/1hre.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.010860
/projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t2k-w0.5.mod(21):  Reading nostruct-align/1vfbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-16978/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t2k-w0.5.mod (nostruct-align/1vfbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.943893
/projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-w0.5.mod(22):  Reading nostruct-align/1aho.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-5643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-w0.5.mod (nostruct-align/1aho.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.030897
/projects/compbio/experiments/models.97/pdb/1i/1isiA/nostruct-align/1isiA.t2k-w0.5.mod(22):  Reading nostruct-align/1isiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1isiA/nostruct-align/1isiA.t2k-w0.5.mod (nostruct-align/1isiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1isiA/nostruct-align/1isiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.583891
/projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t2k-w0.5.mod(21):  Reading nostruct-align/2dgcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-28857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t2k-w0.5.mod (nostruct-align/2dgcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.663864
/projects/compbio/experiments/models.97/pdb/1a/1aj0/nostruct-align/1aj0.t2k-w0.5.mod(21):  Reading nostruct-align/1aj0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj0/nostruct-align/1aj0.t2k-w0.5.mod (nostruct-align/1aj0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aj0/nostruct-align/1aj0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.672871
/projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t2k-w0.5.mod(21):  Reading nostruct-align/1aj2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-30078/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t2k-w0.5.mod (nostruct-align/1aj2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.488855
/projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t2k-w0.5.mod(21):  Reading nostruct-align/1aj3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-10120/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t2k-w0.5.mod (nostruct-align/1aj3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.351898
/projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t2k-w0.5.mod(22):  Reading nostruct-align/1cmaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8564/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t2k-w0.5.mod (nostruct-align/1cmaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.299908
/projects/compbio/experiments/models.97/pdb/1r/1rnbA/nostruct-align/1rnbA.t2k-w0.5.mod(22):  Reading nostruct-align/1rnbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11282/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rnbA/nostruct-align/1rnbA.t2k-w0.5.mod (nostruct-align/1rnbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rnbA/nostruct-align/1rnbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.652855
/projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t2k-w0.5.mod(21):  Reading nostruct-align/1aj6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t2k-w0.5.mod (nostruct-align/1aj6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.618870
/projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t2k-w0.5.mod(21):  Reading nostruct-align/1hrq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8047/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t2k-w0.5.mod (nostruct-align/1hrq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.731867
/projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t2k-w0.5.mod(22):  Reading nostruct-align/1bxeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28663/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t2k-w0.5.mod (nostruct-align/1bxeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.892893
/projects/compbio/experiments/models.97/pdb/1f/1fwoA/nostruct-align/1fwoA.t2k-w0.5.mod(21):  Reading nostruct-align/1fwoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-15759/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwoA/nostruct-align/1fwoA.t2k-w0.5.mod (nostruct-align/1fwoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwoA/nostruct-align/1fwoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.960875
/projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-w0.5.mod(22):  Reading nostruct-align/1a3aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26237/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-w0.5.mod (nostruct-align/1a3aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.054855
/projects/compbio/experiments/models.97/pdb/1e/1eemA/nostruct-align/1eemA.t2k-w0.5.mod(21):  Reading nostruct-align/1eemA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-1036/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eemA/nostruct-align/1eemA.t2k-w0.5.mod (nostruct-align/1eemA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eemA/nostruct-align/1eemA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.565897
/projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-w0.5.mod(22):  Reading nostruct-align/1e2kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-w0.5.mod (nostruct-align/1e2kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2kA/nostruct-align/1e2kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.323898
/projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t2k-w0.5.mod(21):  Reading nostruct-align/1a3aC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-7763/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t2k-w0.5.mod (nostruct-align/1a3aC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.731869
/projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t2k-w0.5.mod(21):  Reading nostruct-align/1fc1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-6683/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t2k-w0.5.mod (nostruct-align/1fc1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.658867
/projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k-w0.5.mod(22):  Reading nostruct-align/1aie.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k-w0.5.mod (nostruct-align/1aie.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.611851
/projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-w0.5.mod(22):  Reading nostruct-align/1elwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24694/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-w0.5.mod (nostruct-align/1elwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.945898
/projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t2k-w0.5.mod(21):  Reading nostruct-align/2fnbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-10620/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t2k-w0.5.mod (nostruct-align/2fnbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.205858
/projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-w0.5.mod(22):  Reading nostruct-align/1jhfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-w0.5.mod (nostruct-align/1jhfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jhfA/nostruct-align/1jhfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.239866
/projects/compbio/experiments/models.97/pdb/1d/1dy9A/nostruct-align/1dy9A.t2k-w0.5.mod(22):  Reading nostruct-align/1dy9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5356/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dy9A/nostruct-align/1dy9A.t2k-w0.5.mod (nostruct-align/1dy9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dy9A/nostruct-align/1dy9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.580900
/projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-w0.5.mod(22):  Reading nostruct-align/1wer.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6580/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-w0.5.mod (nostruct-align/1wer.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.880882
/projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t2k-w0.5.mod(22):  Reading nostruct-align/1ail.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-1640/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t2k-w0.5.mod (nostruct-align/1ail.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.763866
/projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t2k-w0.5.mod(21):  Reading nostruct-align/1aim.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-12565/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t2k-w0.5.mod (nostruct-align/1aim.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.613901
/projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t2k-w0.5.mod(21):  Reading nostruct-align/1air.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t2k-w0.5.mod (nostruct-align/1air.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.021873
/projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-w0.5.mod(22):  Reading nostruct-align/1ak0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14121/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-w0.5.mod (nostruct-align/1ak0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.682856
/projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t2k-w0.5.mod(21):  Reading nostruct-align/1ak1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-22343/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t2k-w0.5.mod (nostruct-align/1ak1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.917877
/projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t2k-w0.5.mod(21):  Reading nostruct-align/1aiu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-24730/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t2k-w0.5.mod (nostruct-align/1aiu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.315910
/projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t2k-w0.5.mod(21):  Reading nostruct-align/1hsm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-18086/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t2k-w0.5.mod (nostruct-align/1hsm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.651907
/projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t2k-w0.5.mod(22):  Reading nostruct-align/1cmbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28315/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t2k-w0.5.mod (nostruct-align/1cmbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.299908
/projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t2k-w0.5.mod(21):  Reading nostruct-align/1aiw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-14925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t2k-w0.5.mod (nostruct-align/1aiw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.956877
/projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t2k-w0.5.mod(22):  Reading nostruct-align/1ak5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t2k-w0.5.mod (nostruct-align/1ak5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.347910
/projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t2k-w0.5.mod(21):  Reading nostruct-align/1ak7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-21926/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t2k-w0.5.mod (nostruct-align/1ak7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.053877
/projects/compbio/experiments/models.97/pdb/1k/1k8tA/nostruct-align/1k8tA.t2k-w0.5.mod(22):  Reading nostruct-align/1k8tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19806/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8tA/nostruct-align/1k8tA.t2k-w0.5.mod (nostruct-align/1k8tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8tA/nostruct-align/1k8tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.986910
/projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t2k-w0.5.mod(21):  Reading nostruct-align/1hsq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-31789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t2k-w0.5.mod (nostruct-align/1hsq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.693853
/projects/compbio/experiments/models.97/pdb/1h/1hsr/nostruct-align/1hsr.t2k-w0.5.mod(22):  Reading nostruct-align/1hsr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23767/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsr/nostruct-align/1hsr.t2k-w0.5.mod (nostruct-align/1hsr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hsr/nostruct-align/1hsr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.698893
/projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t2k-w0.5.mod(21):  Reading nostruct-align/2lbd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-15667/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t2k-w0.5.mod (nostruct-align/2lbd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.131905
/projects/compbio/experiments/models.97/pdb/1h/1h5pA/nostruct-align/1h5pA.t2k-w0.5.mod(21):  Reading nostruct-align/1h5pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-30215/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5pA/nostruct-align/1h5pA.t2k-w0.5.mod (nostruct-align/1h5pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h5pA/nostruct-align/1h5pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.672853
/projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t2k-w0.5.mod(21):  Reading nostruct-align/1eta1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-24822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t2k-w0.5.mod (nostruct-align/1eta1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.252869
/projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t2k-w0.5.mod(21):  Reading nostruct-align/1qckA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t2k-w0.5.mod (nostruct-align/1qckA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.036863
/projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t2k-w0.5.mod(21):  Reading nostruct-align/1fc2C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21902/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t2k-w0.5.mod (nostruct-align/1fc2C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.764887
/projects/compbio/experiments/models.97/pdb/1f/1fc2D/nostruct-align/1fc2D.t2k-w0.5.mod(21):  Reading nostruct-align/1fc2D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-4629/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc2D/nostruct-align/1fc2D.t2k-w0.5.mod (nostruct-align/1fc2D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fc2D/nostruct-align/1fc2D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.388905
/projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t2k-w0.5.mod(21):  Reading nostruct-align/2at2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-27399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t2k-w0.5.mod (nostruct-align/2at2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.917889
/projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t2k-w0.5.mod(21):  Reading nostruct-align/2lbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t2k-w0.5.mod (nostruct-align/2lbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.223883
/projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-w0.5.mod(21):  Reading nostruct-align/2sli.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-24612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-w0.5.mod (nostruct-align/2sli.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.672897
/projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t2k-w0.5.mod(21):  Reading nostruct-align/1b6rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t2k-w0.5.mod (nostruct-align/1b6rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.789886
/projects/compbio/experiments/models.97/pdb/1q/1ql3A/nostruct-align/1ql3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ql3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-10044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1ql3A/nostruct-align/1ql3A.t2k-w0.5.mod (nostruct-align/1ql3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1ql3A/nostruct-align/1ql3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.281910
/projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t2k-w0.5.mod(21):  Reading nostruct-align/1hta.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-30793/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t2k-w0.5.mod (nostruct-align/1hta.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.425873
/projects/compbio/experiments/models.97/pdb/1f/1f00I/nostruct-align/1f00I.t2k-w0.5.mod(22):  Reading nostruct-align/1f00I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f00I/nostruct-align/1f00I.t2k-w0.5.mod (nostruct-align/1f00I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f00I/nostruct-align/1f00I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.352888
/projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t2k-w0.5.mod(22):  Reading nostruct-align/1ajj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-26708/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t2k-w0.5.mod (nostruct-align/1ajj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.031883
/projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-w0.5.mod(22):  Reading nostruct-align/1jhgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19938/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-w0.5.mod (nostruct-align/1jhgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.805872
/projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t2k-w0.5.mod(21):  Reading nostruct-align/1cezA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-8668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t2k-w0.5.mod (nostruct-align/1cezA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.138908
/projects/compbio/experiments/models.97/pdb/1g/1g2aA/nostruct-align/1g2aA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5226/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2aA/nostruct-align/1g2aA.t2k-w0.5.mod (nostruct-align/1g2aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2aA/nostruct-align/1g2aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.375856
/projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t2k-w0.5.mod(21):  Reading nostruct-align/1tubA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t2k-w0.5.mod (nostruct-align/1tubA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.615856
/projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t2k-w0.5.mod(21):  Reading nostruct-align/2sn3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-17538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t2k-w0.5.mod (nostruct-align/2sn3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.417912
/projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-w0.5.mod(22):  Reading nostruct-align/1al3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-w0.5.mod (nostruct-align/1al3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.144882
/projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-w0.5.mod(22):  Reading nostruct-align/1cmcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21608/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-w0.5.mod (nostruct-align/1cmcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmcA/nostruct-align/1cmcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.299908
/projects/compbio/experiments/models.97/pdb/1y/1yprA/nostruct-align/1yprA.t2k-w0.5.mod(21):  Reading nostruct-align/1yprA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-28757/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yprA/nostruct-align/1yprA.t2k-w0.5.mod (nostruct-align/1yprA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yprA/nostruct-align/1yprA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.211891
/projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t2k-w0.5.mod(21):  Reading nostruct-align/1htn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-20110/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t2k-w0.5.mod (nostruct-align/1htn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.384882
/projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t2k-w0.5.mod(22):  Reading nostruct-align/1htp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t2k-w0.5.mod (nostruct-align/1htp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.985901
/projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-w0.5.mod(22):  Reading nostruct-align/1k8uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-w0.5.mod (nostruct-align/1k8uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8uA/nostruct-align/1k8uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.382891
/projects/compbio/experiments/models.97/pdb/1h/1hhsA/nostruct-align/1hhsA.t2k-w0.5.mod(22):  Reading nostruct-align/1hhsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hhsA/nostruct-align/1hhsA.t2k-w0.5.mod (nostruct-align/1hhsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hhsA/nostruct-align/1hhsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.076906
/projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t2k-w0.5.mod(21):  Reading nostruct-align/1d6gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t2k-w0.5.mod (nostruct-align/1d6gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.224865
/projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t2k-w0.5.mod(22):  Reading nostruct-align/1diiC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t2k-w0.5.mod (nostruct-align/1diiC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.763876
/projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-w0.5.mod(21):  Reading nostruct-align/1h5qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-12711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-w0.5.mod (nostruct-align/1h5qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h5qA/nostruct-align/1h5qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.234879
/projects/compbio/experiments/models.97/pdb/1f/1fwqA/nostruct-align/1fwqA.t2k-w0.5.mod(21):  Reading nostruct-align/1fwqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwqA/nostruct-align/1fwqA.t2k-w0.5.mod (nostruct-align/1fwqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwqA/nostruct-align/1fwqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.648882
/projects/compbio/experiments/models.97/pdb/1e/1eeoA/nostruct-align/1eeoA.t2k-w0.5.mod(21):  Reading nostruct-align/1eeoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-5901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eeoA/nostruct-align/1eeoA.t2k-w0.5.mod (nostruct-align/1eeoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eeoA/nostruct-align/1eeoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.410873
/projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t2k-w0.5.mod(21):  Reading nostruct-align/1tfpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-22712/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t2k-w0.5.mod (nostruct-align/1tfpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.353893
/projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t2k-w0.5.mod(21):  Reading nostruct-align/1etb1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-27810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t2k-w0.5.mod (nostruct-align/1etb1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.379877
/projects/compbio/experiments/models.97/pdb/1f/1fc3A/nostruct-align/1fc3A.t2k-w0.5.mod(22):  Reading nostruct-align/1fc3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27436/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc3A/nostruct-align/1fc3A.t2k-w0.5.mod (nostruct-align/1fc3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fc3A/nostruct-align/1fc3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.488903
/projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t2k-w0.5.mod(22):  Reading nostruct-align/1dpsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26252/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t2k-w0.5.mod (nostruct-align/1dpsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.267859
/projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t2k-w0.5.mod(21):  Reading nostruct-align/1amoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-32622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t2k-w0.5.mod (nostruct-align/1amoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.695887
/projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t2k-w0.5.mod(21):  Reading nostruct-align/1dpsD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14701/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t2k-w0.5.mod (nostruct-align/1dpsD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.833889
/projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t2k-w0.5.mod(21):  Reading nostruct-align/1elyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-2837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t2k-w0.5.mod (nostruct-align/1elyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.358871
/projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t2k-w0.5.mod(21):  Reading nostruct-align/1en7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12847/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t2k-w0.5.mod (nostruct-align/1en7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.195879
/projects/compbio/experiments/models.97/pdb/2o/2oatA/nostruct-align/2oatA.t2k-w0.5.mod(21):  Reading nostruct-align/2oatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2oatA/nostruct-align/2oatA.t2k-w0.5.mod (nostruct-align/2oatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2oatA/nostruct-align/2oatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.551903
/projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t2k-w0.5.mod(21):  Reading nostruct-align/1tmzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-1255/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t2k-w0.5.mod (nostruct-align/1tmzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.698851
/projects/compbio/experiments/models.97/pdb/1b/1b6sA/nostruct-align/1b6sA.t2k-w0.5.mod(22):  Reading nostruct-align/1b6sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6sA/nostruct-align/1b6sA.t2k-w0.5.mod (nostruct-align/1b6sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6sA/nostruct-align/1b6sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.400898
/projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t2k-w0.5.mod(22):  Reading nostruct-align/2mprA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t2k-w0.5.mod (nostruct-align/2mprA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.075891
/projects/compbio/experiments/models.97/pdb/1q/1qjvA/nostruct-align/1qjvA.t2k-w0.5.mod(22):  Reading nostruct-align/1qjvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29695/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjvA/nostruct-align/1qjvA.t2k-w0.5.mod (nostruct-align/1qjvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjvA/nostruct-align/1qjvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.148855
/projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28862/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-w0.5.mod (nostruct-align/1g2bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2bA/nostruct-align/1g2bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.484863
/projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-w0.5.mod(22):  Reading nostruct-align/1ako.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-19862/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-w0.5.mod (nostruct-align/1ako.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.558907
/projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t2k-w0.5.mod(21):  Reading nostruct-align/1akr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-25486/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t2k-w0.5.mod (nostruct-align/1akr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.790871
/projects/compbio/experiments/models.97/pdb/1j/1jq0A/nostruct-align/1jq0A.t2k-w0.5.mod(22):  Reading nostruct-align/1jq0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20190/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq0A/nostruct-align/1jq0A.t2k-w0.5.mod (nostruct-align/1jq0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jq0A/nostruct-align/1jq0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.607855
/projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t2k-w0.5.mod(22):  Reading nostruct-align/1am2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31705/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t2k-w0.5.mod (nostruct-align/1am2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.156898
/projects/compbio/experiments/models.97/pdb/1g/1g9lA/nostruct-align/1g9lA.t2k-w0.5.mod(21):  Reading nostruct-align/1g9lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25023/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9lA/nostruct-align/1g9lA.t2k-w0.5.mod (nostruct-align/1g9lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g9lA/nostruct-align/1g9lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.266863
/projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t2k-w0.5.mod(22):  Reading nostruct-align/1vmoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t2k-w0.5.mod (nostruct-align/1vmoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.954876
/projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t2k-w0.5.mod(21):  Reading nostruct-align/1aky.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-2920/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t2k-w0.5.mod (nostruct-align/1aky.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.956888
/projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t2k-w0.5.mod(21):  Reading nostruct-align/1akz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t2k-w0.5.mod (nostruct-align/1akz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.320906
/projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t2k-w0.5.mod(21):  Reading nostruct-align/2hmzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8624/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t2k-w0.5.mod (nostruct-align/2hmzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.023882
/projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-w0.5.mod(22):  Reading nostruct-align/1h70A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-w0.5.mod (nostruct-align/1h70A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h70A/nostruct-align/1h70A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.327869
/projects/compbio/experiments/models.97/pdb/1f/1fwrA/nostruct-align/1fwrA.t2k-w0.5.mod(21):  Reading nostruct-align/1fwrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-16893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwrA/nostruct-align/1fwrA.t2k-w0.5.mod (nostruct-align/1fwrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwrA/nostruct-align/1fwrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.842903
/projects/compbio/experiments/models.97/pdb/3a/3aprE/nostruct-align/3aprE.t2k-w0.5.mod(21):  Reading nostruct-align/3aprE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-6251/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3a/3aprE/nostruct-align/3aprE.t2k-w0.5.mod (nostruct-align/3aprE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3a/3aprE/nostruct-align/3aprE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.942888
/projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t2k-w0.5.mod(22):  Reading nostruct-align/1huw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-5470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t2k-w0.5.mod (nostruct-align/1huw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.701878
/projects/compbio/experiments/models.97/pdb/1f/1fc4A/nostruct-align/1fc4A.t2k-w0.5.mod(22):  Reading nostruct-align/1fc4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc4A/nostruct-align/1fc4A.t2k-w0.5.mod (nostruct-align/1fc4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fc4A/nostruct-align/1fc4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.642889
/projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k-w0.5.mod(21):  Reading nostruct-align/1dptA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12088/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k-w0.5.mod (nostruct-align/1dptA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.324873
/projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-w0.5.mod(22):  Reading nostruct-align/1whi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32176/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-w0.5.mod (nostruct-align/1whi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.733879
/projects/compbio/experiments/models.97/pdb/1e/1e9xA/nostruct-align/1e9xA.t2k-w0.5.mod(21):  Reading nostruct-align/1e9xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-8963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e9xA/nostruct-align/1e9xA.t2k-w0.5.mod (nostruct-align/1e9xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e9xA/nostruct-align/1e9xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.386898
/projects/compbio/experiments/models.97/pdb/1i/1i9aA/nostruct-align/1i9aA.t2k-w0.5.mod(22):  Reading nostruct-align/1i9aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-17876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9aA/nostruct-align/1i9aA.t2k-w0.5.mod (nostruct-align/1i9aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i9aA/nostruct-align/1i9aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.303875
/projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t2k-w0.5.mod(22):  Reading nostruct-align/1who.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21683/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t2k-w0.5.mod (nostruct-align/1who.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.171860
/projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t2k-w0.5.mod(21):  Reading nostruct-align/1b6tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t2k-w0.5.mod (nostruct-align/1b6tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.285858
/projects/compbio/experiments/models.97/pdb/1k/1kzkA/nostruct-align/1kzkA.t2k-w0.5.mod(22):  Reading nostruct-align/1kzkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23871/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzkA/nostruct-align/1kzkA.t2k-w0.5.mod (nostruct-align/1kzkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kzkA/nostruct-align/1kzkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.044867
/projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t2k-w0.5.mod(21):  Reading nostruct-align/1qjwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-2116/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t2k-w0.5.mod (nostruct-align/1qjwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.414862
/projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t2k-w0.5.mod(21):  Reading nostruct-align/1hvc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t2k-w0.5.mod (nostruct-align/1hvc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.346870
/projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t2k-w0.5.mod(21):  Reading nostruct-align/1hvd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-4641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t2k-w0.5.mod (nostruct-align/1hvd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.199852
/projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t2k-w0.5.mod(21):  Reading nostruct-align/6rxn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-26667/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t2k-w0.5.mod (nostruct-align/6rxn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.799896
/projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-w0.5.mod(21):  Reading nostruct-align/1atzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10471/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-w0.5.mod (nostruct-align/1atzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.279860
/projects/compbio/experiments/models.97/pdb/1k/1kdoA/nostruct-align/1kdoA.t2k-w0.5.mod(22):  Reading nostruct-align/1kdoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdoA/nostruct-align/1kdoA.t2k-w0.5.mod (nostruct-align/1kdoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kdoA/nostruct-align/1kdoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.047869
/projects/compbio/experiments/models.97/pdb/1g/1g2cA/nostruct-align/1g2cA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4731/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cA/nostruct-align/1g2cA.t2k-w0.5.mod (nostruct-align/1g2cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2cA/nostruct-align/1g2cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.073883
/projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t2k-w0.5.mod(21):  Reading nostruct-align/1atzB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-7616/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t2k-w0.5.mod (nostruct-align/1atzB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.989883
/projects/compbio/experiments/models.97/pdb/1g/1g2cB/nostruct-align/1g2cB.t2k-w0.5.mod(22):  Reading nostruct-align/1g2cB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5919/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cB/nostruct-align/1g2cB.t2k-w0.5.mod (nostruct-align/1g2cB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2cB/nostruct-align/1g2cB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.070873
/projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t2k-w0.5.mod(21):  Reading nostruct-align/1alq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-5970/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t2k-w0.5.mod (nostruct-align/1alq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.588902
/projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t2k-w0.5.mod(22):  Reading nostruct-align/2sns.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28053/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t2k-w0.5.mod (nostruct-align/2sns.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.085907
/projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t2k-w0.5.mod(21):  Reading nostruct-align/2snv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-5137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t2k-w0.5.mod (nostruct-align/2snv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.649878
/projects/compbio/experiments/models.97/pdb/1f/1f02T/nostruct-align/1f02T.t2k-w0.5.mod(22):  Reading nostruct-align/1f02T.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29811/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f02T/nostruct-align/1f02T.t2k-w0.5.mod (nostruct-align/1f02T.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f02T/nostruct-align/1f02T.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.795902
/projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t2k-w0.5.mod(22):  Reading nostruct-align/1alu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25190/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t2k-w0.5.mod (nostruct-align/1alu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.053900
/projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t2k-w0.5.mod(21):  Reading nostruct-align/1yptA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13502/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t2k-w0.5.mod (nostruct-align/1yptA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.370867
/projects/compbio/experiments/models.97/pdb/1g/1g2cI/nostruct-align/1g2cI.t2k-w0.5.mod(21):  Reading nostruct-align/1g2cI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17611/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cI/nostruct-align/1g2cI.t2k-w0.5.mod (nostruct-align/1g2cI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2cI/nostruct-align/1g2cI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.017891
/projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t2k-w0.5.mod(22):  Reading nostruct-align/2rslA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t2k-w0.5.mod (nostruct-align/2rslA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.886900
/projects/compbio/experiments/models.97/pdb/1g/1g2cK/nostruct-align/1g2cK.t2k-w0.5.mod(21):  Reading nostruct-align/1g2cK.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cK/nostruct-align/1g2cK.t2k-w0.5.mod (nostruct-align/1g2cK.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2cK/nostruct-align/1g2cK.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.006851
/projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t2k-w0.5.mod(21):  Reading nostruct-align/1aly.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t2k-w0.5.mod (nostruct-align/1aly.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.393904
/projects/compbio/experiments/models.97/pdb/1k/1k8wA/nostruct-align/1k8wA.t2k-w0.5.mod(22):  Reading nostruct-align/1k8wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-1323/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k8wA/nostruct-align/1k8wA.t2k-w0.5.mod (nostruct-align/1k8wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k8wA/nostruct-align/1k8wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.320864
/projects/compbio/experiments/models.97/pdb/1g/1g2cL/nostruct-align/1g2cL.t2k-w0.5.mod(21):  Reading nostruct-align/1g2cL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5614/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cL/nostruct-align/1g2cL.t2k-w0.5.mod (nostruct-align/1g2cL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2cL/nostruct-align/1g2cL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.213903
/projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t2k-w0.5.mod(21):  Reading nostruct-align/1an8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-22177/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t2k-w0.5.mod (nostruct-align/1an8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.099873
/projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t2k-w0.5.mod(22):  Reading nostruct-align/1bxiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32016/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t2k-w0.5.mod (nostruct-align/1bxiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.021862
/projects/compbio/experiments/models.97/pdb/1g/1g2cO/nostruct-align/1g2cO.t2k-w0.5.mod(21):  Reading nostruct-align/1g2cO.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1511/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cO/nostruct-align/1g2cO.t2k-w0.5.mod (nostruct-align/1g2cO.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2cO/nostruct-align/1g2cO.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.994892
/projects/compbio/experiments/models.97/pdb/1f/1fwsA/nostruct-align/1fwsA.t2k-w0.5.mod(21):  Reading nostruct-align/1fwsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwsA/nostruct-align/1fwsA.t2k-w0.5.mod (nostruct-align/1fwsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwsA/nostruct-align/1fwsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.791882
/projects/compbio/experiments/models.97/pdb/1e/1eeqA/nostruct-align/1eeqA.t2k-w0.5.mod(22):  Reading nostruct-align/1eeqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eeqA/nostruct-align/1eeqA.t2k-w0.5.mod (nostruct-align/1eeqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eeqA/nostruct-align/1eeqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.046890
/projects/compbio/experiments/models.97/pdb/1g/1g9mG/nostruct-align/1g9mG.t2k-w0.5.mod(22):  Reading nostruct-align/1g9mG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-30511/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9mG/nostruct-align/1g9mG.t2k-w0.5.mod (nostruct-align/1g9mG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g9mG/nostruct-align/1g9mG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.830893
/projects/compbio/experiments/models.97/pdb/1g/1g2cQ/nostruct-align/1g2cQ.t2k-w0.5.mod(21):  Reading nostruct-align/1g2cQ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-1377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2cQ/nostruct-align/1g2cQ.t2k-w0.5.mod (nostruct-align/1g2cQ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2cQ/nostruct-align/1g2cQ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.985905
/projects/compbio/experiments/models.97/pdb/1i/1i37A/nostruct-align/1i37A.t2k-w0.5.mod(21):  Reading nostruct-align/1i37A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30326/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i37A/nostruct-align/1i37A.t2k-w0.5.mod (nostruct-align/1i37A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i37A/nostruct-align/1i37A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.042881
/projects/compbio/experiments/models.97/pdb/1q/1qcnA/nostruct-align/1qcnA.t2k-w0.5.mod(22):  Reading nostruct-align/1qcnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-4063/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcnA/nostruct-align/1qcnA.t2k-w0.5.mod (nostruct-align/1qcnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcnA/nostruct-align/1qcnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.001886
/projects/compbio/experiments/models.97/pdb/1d/1dpuA/nostruct-align/1dpuA.t2k-w0.5.mod(21):  Reading nostruct-align/1dpuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-25957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpuA/nostruct-align/1dpuA.t2k-w0.5.mod (nostruct-align/1dpuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpuA/nostruct-align/1dpuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.927868
/projects/compbio/experiments/models.97/pdb/1a/1amb/nostruct-align/1amb.t2k-w0.5.mod(21):  Reading nostruct-align/1amb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amb/nostruct-align/1amb.t2k-w0.5.mod (nostruct-align/1amb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amb/nostruct-align/1amb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.707909
/projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k-w0.5.mod(21):  Reading nostruct-align/2ccyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3923/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k-w0.5.mod (nostruct-align/2ccyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.044903
/projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t2k-w0.5.mod(21):  Reading nostruct-align/2ltnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t2k-w0.5.mod (nostruct-align/2ltnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.842911
/projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t2k-w0.5.mod(21):  Reading nostruct-align/2ltnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-32492/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t2k-w0.5.mod (nostruct-align/2ltnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.658897
/projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-w0.5.mod(21):  Reading nostruct-align/1amf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-32443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-w0.5.mod (nostruct-align/1amf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.713863
/projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t2k-w0.5.mod(21):  Reading nostruct-align/1mknA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26190/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t2k-w0.5.mod (nostruct-align/1mknA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.046909
/projects/compbio/experiments/models.97/pdb/1i/1i9bA/nostruct-align/1i9bA.t2k-w0.5.mod(22):  Reading nostruct-align/1i9bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24315/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9bA/nostruct-align/1i9bA.t2k-w0.5.mod (nostruct-align/1i9bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i9bA/nostruct-align/1i9bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.604902
/projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t2k-w0.5.mod(21):  Reading nostruct-align/1bk5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-30441/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t2k-w0.5.mod (nostruct-align/1bk5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.362854
/projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t2k-w0.5.mod(21):  Reading nostruct-align/2leu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t2k-w0.5.mod (nostruct-align/2leu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.649899
/projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t2k-w0.5.mod(21):  Reading nostruct-align/1amj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-25632/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t2k-w0.5.mod (nostruct-align/1amj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.237869
/projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-w0.5.mod(22):  Reading nostruct-align/1jhjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-2782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-w0.5.mod (nostruct-align/1jhjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jhjA/nostruct-align/1jhjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.551882
/projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t2k-w0.5.mod(21):  Reading nostruct-align/1amk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16014/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t2k-w0.5.mod (nostruct-align/1amk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.975908
/projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t2k-w0.5.mod(21):  Reading nostruct-align/1aml.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-11418/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t2k-w0.5.mod (nostruct-align/1aml.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.317900
/projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t2k-w0.5.mod(22):  Reading nostruct-align/1amm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-10533/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t2k-w0.5.mod (nostruct-align/1amm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.082870
/projects/compbio/experiments/models.97/pdb/1g/1gefA/nostruct-align/1gefA.t2k-w0.5.mod(22):  Reading nostruct-align/1gefA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29493/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gefA/nostruct-align/1gefA.t2k-w0.5.mod (nostruct-align/1gefA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gefA/nostruct-align/1gefA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.519897
/projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t2k-w0.5.mod(21):  Reading nostruct-align/1wit.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-32011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t2k-w0.5.mod (nostruct-align/1wit.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.569851
/projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t2k-w0.5.mod(21):  Reading nostruct-align/1amp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t2k-w0.5.mod (nostruct-align/1amp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.113869
/projects/compbio/experiments/models.97/pdb/1j/1jq2A/nostruct-align/1jq2A.t2k-w0.5.mod(21):  Reading nostruct-align/1jq2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-11446/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq2A/nostruct-align/1jq2A.t2k-w0.5.mod (nostruct-align/1jq2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jq2A/nostruct-align/1jq2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.961876
/projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t2k-w0.5.mod(21):  Reading nostruct-align/1jotA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-3818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t2k-w0.5.mod (nostruct-align/1jotA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.079853
/projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t2k-w0.5.mod(21):  Reading nostruct-align/1amx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19633/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t2k-w0.5.mod (nostruct-align/1amx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.742905
/projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t2k-w0.5.mod(21):  Reading nostruct-align/2lfb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18971/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t2k-w0.5.mod (nostruct-align/2lfb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.274872
/projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t2k-w0.5.mod(22):  Reading nostruct-align/1d6jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-3997/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t2k-w0.5.mod (nostruct-align/1d6jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.726894
/projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t2k-w0.5.mod(21):  Reading nostruct-align/3ncmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1217/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t2k-w0.5.mod (nostruct-align/3ncmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.246866
/projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t2k-w0.5.mod(22):  Reading nostruct-align/1eerA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t2k-w0.5.mod (nostruct-align/1eerA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.213863
/projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-w0.5.mod(22):  Reading nostruct-align/1h72C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23831/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-w0.5.mod (nostruct-align/1h72C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h72C/nostruct-align/1h72C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.420906
/projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t2k-w0.5.mod(22):  Reading nostruct-align/1eerB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10697/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t2k-w0.5.mod (nostruct-align/1eerB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.119879
/projects/compbio/experiments/models.97/pdb/6d/6dfr/nostruct-align/6dfr.t2k-w0.5.mod(21):  Reading nostruct-align/6dfr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30169/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6d/6dfr/nostruct-align/6dfr.t2k-w0.5.mod (nostruct-align/6dfr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6d/6dfr/nostruct-align/6dfr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.894909
/projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k-w0.5.mod(22):  Reading nostruct-align/1fc6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9633/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k-w0.5.mod (nostruct-align/1fc6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fc6A/nostruct-align/1fc6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.173899
/projects/compbio/experiments/models.97/pdb/1a/1ao0A/nostruct-align/1ao0A.t2k-w0.5.mod(21):  Reading nostruct-align/1ao0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-27556/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ao0A/nostruct-align/1ao0A.t2k-w0.5.mod (nostruct-align/1ao0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ao0A/nostruct-align/1ao0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.248878
/projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k-w0.5.mod(21):  Reading nostruct-align/1anf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9707/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k-w0.5.mod (nostruct-align/1anf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.100853
/projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t2k-w0.5.mod(21):  Reading nostruct-align/1bk6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-16188/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t2k-w0.5.mod (nostruct-align/1bk6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.390850
/projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t2k-w0.5.mod(21):  Reading nostruct-align/2lh2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26149/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t2k-w0.5.mod (nostruct-align/2lh2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.567858
/projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t2k-w0.5.mod(21):  Reading nostruct-align/2spo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-19503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t2k-w0.5.mod (nostruct-align/2spo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.108879
/projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t2k-w0.5.mod(21):  Reading nostruct-align/2azaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t2k-w0.5.mod (nostruct-align/2azaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.016901
/projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k-w0.5.mod(21):  Reading nostruct-align/1gegA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-24715/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k-w0.5.mod (nostruct-align/1gegA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gegA/nostruct-align/1gegA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.243866
/projects/compbio/experiments/models.97/pdb/1e/1eteA/nostruct-align/1eteA.t2k-w0.5.mod(22):  Reading nostruct-align/1eteA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1738/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eteA/nostruct-align/1eteA.t2k-w0.5.mod (nostruct-align/1eteA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eteA/nostruct-align/1eteA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.805872
/projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t2k-w0.5.mod(21):  Reading nostruct-align/1ap0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t2k-w0.5.mod (nostruct-align/1ap0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.838903
/projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t2k-w0.5.mod(21):  Reading nostruct-align/1fpkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-21631/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t2k-w0.5.mod (nostruct-align/1fpkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.786869
/projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t2k-w0.5.mod(21):  Reading nostruct-align/1ans.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-26675/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t2k-w0.5.mod (nostruct-align/1ans.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.821867
/projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t2k-w0.5.mod(21):  Reading nostruct-align/1paa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-12889/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t2k-w0.5.mod (nostruct-align/1paa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.625895
/projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t2k-w0.5.mod(22):  Reading nostruct-align/1anv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-892/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t2k-w0.5.mod (nostruct-align/1anv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.140896
/projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-w0.5.mod(22):  Reading nostruct-align/1hxn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-w0.5.mod (nostruct-align/1hxn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.160881
/projects/compbio/experiments/models.97/pdb/1g/1g9oA/nostruct-align/1g9oA.t2k-w0.5.mod(22):  Reading nostruct-align/1g9oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9oA/nostruct-align/1g9oA.t2k-w0.5.mod (nostruct-align/1g9oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g9oA/nostruct-align/1g9oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.212896
/projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t2k-w0.5.mod(21):  Reading nostruct-align/1ap7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-24527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t2k-w0.5.mod (nostruct-align/1ap7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.576889
/projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t2k-w0.5.mod(21):  Reading nostruct-align/1ap8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t2k-w0.5.mod (nostruct-align/1ap8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.489885
/projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t2k-w0.5.mod(21):  Reading nostruct-align/1pah.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16092/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t2k-w0.5.mod (nostruct-align/1pah.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.934877
/projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t2k-w0.5.mod(21):  Reading nostruct-align/1bxkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-22743/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t2k-w0.5.mod (nostruct-align/1bxkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.777910
/projects/compbio/experiments/models.97/pdb/1f/1fwuA/nostruct-align/1fwuA.t2k-w0.5.mod(22):  Reading nostruct-align/1fwuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25555/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwuA/nostruct-align/1fwuA.t2k-w0.5.mod (nostruct-align/1fwuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwuA/nostruct-align/1fwuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.541872
/projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-w0.5.mod(22):  Reading nostruct-align/1h5uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-w0.5.mod (nostruct-align/1h5uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h5uA/nostruct-align/1h5uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.440868
/projects/compbio/experiments/models.97/pdb/1a/1a3gA/nostruct-align/1a3gA.t2k-w0.5.mod(21):  Reading nostruct-align/1a3gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-398/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3gA/nostruct-align/1a3gA.t2k-w0.5.mod (nostruct-align/1a3gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3gA/nostruct-align/1a3gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.384897
/projects/compbio/experiments/models.97/pdb/1e/1eesA/nostruct-align/1eesA.t2k-w0.5.mod(21):  Reading nostruct-align/1eesA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-28638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eesA/nostruct-align/1eesA.t2k-w0.5.mod (nostruct-align/1eesA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eesA/nostruct-align/1eesA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.187899
/projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t2k-w0.5.mod(22):  Reading nostruct-align/1ctqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23284/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t2k-w0.5.mod (nostruct-align/1ctqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.537880
/projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t2k-w0.5.mod(21):  Reading nostruct-align/1eesB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-5551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t2k-w0.5.mod (nostruct-align/1eesB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.042873
/projects/compbio/experiments/models.97/pdb/1g/1gu9A/nostruct-align/1gu9A.t2k-w0.5.mod(22):  Reading nostruct-align/1gu9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gu9A/nostruct-align/1gu9A.t2k-w0.5.mod (nostruct-align/1gu9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gu9A/nostruct-align/1gu9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.167852
/projects/compbio/experiments/models.97/pdb/1i/1i39A/nostruct-align/1i39A.t2k-w0.5.mod(21):  Reading nostruct-align/1i39A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20447/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i39A/nostruct-align/1i39A.t2k-w0.5.mod (nostruct-align/1i39A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i39A/nostruct-align/1i39A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.225861
/projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t2k-w0.5.mod(22):  Reading nostruct-align/1aoa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20162/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t2k-w0.5.mod (nostruct-align/1aoa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.067904
/projects/compbio/experiments/models.97/pdb/2t/2tscA/nostruct-align/2tscA.t2k-w0.5.mod(22):  Reading nostruct-align/2tscA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20990/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tscA/nostruct-align/2tscA.t2k-w0.5.mod (nostruct-align/2tscA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tscA/nostruct-align/2tscA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.382868
/projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t2k-w0.5.mod(21):  Reading nostruct-align/1bk7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-17199/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t2k-w0.5.mod (nostruct-align/1bk7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.588869
/projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t2k-w0.5.mod(21):  Reading nostruct-align/1paz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t2k-w0.5.mod (nostruct-align/1paz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.856874
/projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t2k-w0.5.mod(22):  Reading nostruct-align/1aol.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9735/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t2k-w0.5.mod (nostruct-align/1aol.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.352858
/projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t2k-w0.5.mod(21):  Reading nostruct-align/1wkt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24996/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t2k-w0.5.mod (nostruct-align/1wkt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.326904
/projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t2k-w0.5.mod(21):  Reading nostruct-align/1aoo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-16847/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t2k-w0.5.mod (nostruct-align/1aoo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.291893
/projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k-w0.5.mod(22):  Reading nostruct-align/1aop.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k-w0.5.mod (nostruct-align/1aop.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.284906
/projects/compbio/experiments/models.97/pdb/1g/1g2fC/nostruct-align/1g2fC.t2k-w0.5.mod(22):  Reading nostruct-align/1g2fC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2fC/nostruct-align/1g2fC.t2k-w0.5.mod (nostruct-align/1g2fC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2fC/nostruct-align/1g2fC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -37.803890
/projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t2k-w0.5.mod(21):  Reading nostruct-align/2shkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-12588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t2k-w0.5.mod (nostruct-align/2shkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.653866
/projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t2k-w0.5.mod(21):  Reading nostruct-align/1sceA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-21127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t2k-w0.5.mod (nostruct-align/1sceA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.540880
/projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t2k-w0.5.mod(21):  Reading nostruct-align/1bqbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-28554/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t2k-w0.5.mod (nostruct-align/1bqbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.454878
/projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t2k-w0.5.mod(21):  Reading nostruct-align/1pba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-6594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t2k-w0.5.mod (nostruct-align/1pba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.181889
/projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t2k-w0.5.mod(22):  Reading nostruct-align/1pbe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t2k-w0.5.mod (nostruct-align/1pbe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.744900
/projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t2k-w0.5.mod(21):  Reading nostruct-align/2lhb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-4593/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t2k-w0.5.mod (nostruct-align/2lhb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.379866
/projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t2k-w0.5.mod(21):  Reading nostruct-align/1aoy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4297/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t2k-w0.5.mod (nostruct-align/1aoy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.144875
/projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-w0.5.mod(22):  Reading nostruct-align/1hyp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21074/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-w0.5.mod (nostruct-align/1hyp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.532909
/projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t2k-w0.5.mod(21):  Reading nostruct-align/3adk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-27394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t2k-w0.5.mod (nostruct-align/3adk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.749907
/projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t2k-w0.5.mod(21):  Reading nostruct-align/1hyt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-14576/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t2k-w0.5.mod (nostruct-align/1hyt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.513901
/projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-w0.5.mod(22):  Reading nostruct-align/1eg2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-w0.5.mod (nostruct-align/1eg2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eg2A/nostruct-align/1eg2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.630901
/projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t2k-w0.5.mod(21):  Reading nostruct-align/1rusA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23506/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t2k-w0.5.mod (nostruct-align/1rusA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.360889
/projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t2k-w0.5.mod(21):  Reading nostruct-align/1pbn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t2k-w0.5.mod (nostruct-align/1pbn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.675852
/projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t2k-w0.5.mod(21):  Reading nostruct-align/1bbpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t2k-w0.5.mod (nostruct-align/1bbpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.610909
/projects/compbio/experiments/models.97/pdb/1f/1fazA/nostruct-align/1fazA.t2k-w0.5.mod(22):  Reading nostruct-align/1fazA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32312/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fazA/nostruct-align/1fazA.t2k-w0.5.mod (nostruct-align/1fazA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fazA/nostruct-align/1fazA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.513872
/projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t2k-w0.5.mod(21):  Reading nostruct-align/1pbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-28034/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t2k-w0.5.mod (nostruct-align/1pbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.102884
/projects/compbio/experiments/models.97/pdb/1f/1f06A/nostruct-align/1f06A.t2k-w0.5.mod(22):  Reading nostruct-align/1f06A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f06A/nostruct-align/1f06A.t2k-w0.5.mod (nostruct-align/1f06A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f06A/nostruct-align/1f06A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.963871
/projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t2k-w0.5.mod(21):  Reading nostruct-align/1apa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-28720/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t2k-w0.5.mod (nostruct-align/1apa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.422876
/projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t2k-w0.5.mod(21):  Reading nostruct-align/1jacA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-1760/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t2k-w0.5.mod (nostruct-align/1jacA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.466858
/projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t2k-w0.5.mod(22):  Reading nostruct-align/5csmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t2k-w0.5.mod (nostruct-align/5csmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.301886
/projects/compbio/experiments/models.97/pdb/1j/1jacC/nostruct-align/1jacC.t2k-w0.5.mod(21):  Reading nostruct-align/1jacC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-27175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jacC/nostruct-align/1jacC.t2k-w0.5.mod (nostruct-align/1jacC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jacC/nostruct-align/1jacC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.466858
/projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t2k-w0.5.mod(21):  Reading nostruct-align/2ercA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-21235/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t2k-w0.5.mod (nostruct-align/2ercA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.087868
/projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t2k-w0.5.mod(21):  Reading nostruct-align/1apf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-31952/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t2k-w0.5.mod (nostruct-align/1apf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.647888
/projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t2k-w0.5.mod(22):  Reading nostruct-align/1pbv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3392/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t2k-w0.5.mod (nostruct-align/1pbv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.522892
/projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t2k-w0.5.mod(21):  Reading nostruct-align/1apj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25231/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t2k-w0.5.mod (nostruct-align/1apj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.287897
/projects/compbio/experiments/models.97/pdb/1f/1f6aB/nostruct-align/1f6aB.t2k-w0.5.mod(21):  Reading nostruct-align/1f6aB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6aB/nostruct-align/1f6aB.t2k-w0.5.mod (nostruct-align/1f6aB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6aB/nostruct-align/1f6aB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.682911
/projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t2k-w0.5.mod(21):  Reading nostruct-align/1apo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-12911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t2k-w0.5.mod (nostruct-align/1apo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.413857
/projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t2k-w0.5.mod(21):  Reading nostruct-align/1apq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11596/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t2k-w0.5.mod (nostruct-align/1apq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.828863
/projects/compbio/experiments/models.97/pdb/1s/1scfA/nostruct-align/1scfA.t2k-w0.5.mod(22):  Reading nostruct-align/1scfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31223/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scfA/nostruct-align/1scfA.t2k-w0.5.mod (nostruct-align/1scfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1scfA/nostruct-align/1scfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.965868
/projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-w0.5.mod(21):  Reading nostruct-align/1bqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-1937/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-w0.5.mod (nostruct-align/1bqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.164862
/projects/compbio/experiments/models.97/pdb/1q/1qrdA/nostruct-align/1qrdA.t2k-w0.5.mod(21):  Reading nostruct-align/1qrdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrdA/nostruct-align/1qrdA.t2k-w0.5.mod (nostruct-align/1qrdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qrdA/nostruct-align/1qrdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.940880
/projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t2k-w0.5.mod(21):  Reading nostruct-align/1aps.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-24359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t2k-w0.5.mod (nostruct-align/1aps.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.885851
/projects/compbio/experiments/models.97/pdb/1j/1jq5A/nostruct-align/1jq5A.t2k-w0.5.mod(22):  Reading nostruct-align/1jq5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jq5A/nostruct-align/1jq5A.t2k-w0.5.mod (nostruct-align/1jq5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jq5A/nostruct-align/1jq5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.732855
/projects/compbio/experiments/models.97/pdb/1c/1cmiA/nostruct-align/1cmiA.t2k-w0.5.mod(22):  Reading nostruct-align/1cmiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-379/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmiA/nostruct-align/1cmiA.t2k-w0.5.mod (nostruct-align/1cmiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmiA/nostruct-align/1cmiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.079887
/projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t2k-w0.5.mod(21):  Reading nostruct-align/2rspA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-2003/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t2k-w0.5.mod (nostruct-align/2rspA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.719898
/projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t2k-w0.5.mod(21):  Reading nostruct-align/1pce.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-32151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t2k-w0.5.mod (nostruct-align/1pce.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.062908
/projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t2k-w0.5.mod(21):  Reading nostruct-align/2rspB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-27816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t2k-w0.5.mod (nostruct-align/2rspB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.691879
/projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t2k-w0.5.mod(21):  Reading nostruct-align/1dioA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-20267/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t2k-w0.5.mod (nostruct-align/1dioA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.103874
/projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k-w0.5.mod(21):  Reading nostruct-align/1pch.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20826/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k-w0.5.mod (nostruct-align/1pch.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.218851
/projects/compbio/experiments/models.97/pdb/1d/1d6mA/nostruct-align/1d6mA.t2k-w0.5.mod(21):  Reading nostruct-align/1d6mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-9927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6mA/nostruct-align/1d6mA.t2k-w0.5.mod (nostruct-align/1d6mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d6mA/nostruct-align/1d6mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.661877
/projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t2k-w0.5.mod(21):  Reading nostruct-align/1dioB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1195/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t2k-w0.5.mod (nostruct-align/1dioB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.686855
/projects/compbio/experiments/models.97/pdb/1h/1h5wA/nostruct-align/1h5wA.t2k-w0.5.mod(22):  Reading nostruct-align/1h5wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8843/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h5wA/nostruct-align/1h5wA.t2k-w0.5.mod (nostruct-align/1h5wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h5wA/nostruct-align/1h5wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.401894
/projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-w0.5.mod(22):  Reading nostruct-align/1h75A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10820/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-w0.5.mod (nostruct-align/1h75A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h75A/nostruct-align/1h75A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.560907
/projects/compbio/experiments/models.97/pdb/1e/1eeuA/nostruct-align/1eeuA.t2k-w0.5.mod(21):  Reading nostruct-align/1eeuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30848/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eeuA/nostruct-align/1eeuA.t2k-w0.5.mod (nostruct-align/1eeuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eeuA/nostruct-align/1eeuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.817896
/projects/compbio/experiments/models.97/pdb/1e/1eg3A/nostruct-align/1eg3A.t2k-w0.5.mod(22):  Reading nostruct-align/1eg3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-9036/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg3A/nostruct-align/1eg3A.t2k-w0.5.mod (nostruct-align/1eg3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eg3A/nostruct-align/1eg3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.636904
/projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t2k-w0.5.mod(21):  Reading nostruct-align/1pcl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t2k-w0.5.mod (nostruct-align/1pcl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.019884
/projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t2k-w0.5.mod(21):  Reading nostruct-align/1dioG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t2k-w0.5.mod (nostruct-align/1dioG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.413855
/projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t2k-w0.5.mod(21):  Reading nostruct-align/2u1a.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-26639/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t2k-w0.5.mod (nostruct-align/2u1a.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.758858
/projects/compbio/experiments/models.97/pdb/2m/2minA/nostruct-align/2minA.t2k-w0.5.mod(21):  Reading nostruct-align/2minA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-23744/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2minA/nostruct-align/2minA.t2k-w0.5.mod (nostruct-align/2minA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2minA/nostruct-align/2minA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.936857
/projects/compbio/experiments/models.97/pdb/2m/2minB/nostruct-align/2minB.t2k-w0.5.mod(21):  Reading nostruct-align/2minB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-30981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2minB/nostruct-align/2minB.t2k-w0.5.mod (nostruct-align/2minB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2minB/nostruct-align/2minB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.880871
/projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-7562/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t2k-w0.5.mod (nostruct-align/1qcrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.106897
/projects/compbio/experiments/models.97/pdb/1j/1jadA/nostruct-align/1jadA.t2k-w0.5.mod(22):  Reading nostruct-align/1jadA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jadA/nostruct-align/1jadA.t2k-w0.5.mod (nostruct-align/1jadA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jadA/nostruct-align/1jadA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.401901
/projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-15232/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t2k-w0.5.mod (nostruct-align/1qcrC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.745852
/projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t2k-w0.5.mod(22):  Reading nostruct-align/1aqb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t2k-w0.5.mod (nostruct-align/1aqb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.582890
/projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-7003/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t2k-w0.5.mod (nostruct-align/1qcrD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.730909
/projects/compbio/experiments/models.97/pdb/1p/1pcs/nostruct-align/1pcs.t2k-w0.5.mod(21):  Reading nostruct-align/1pcs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pcs/nostruct-align/1pcs.t2k-w0.5.mod (nostruct-align/1pcs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pcs/nostruct-align/1pcs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.994892
/projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t2k-w0.5.mod(22):  Reading nostruct-align/1amuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-10430/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t2k-w0.5.mod (nostruct-align/1amuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.040892
/projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-28260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t2k-w0.5.mod (nostruct-align/1qcrF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.099886
/projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1717/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t2k-w0.5.mod (nostruct-align/1qcrG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.670856
/projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22990/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t2k-w0.5.mod (nostruct-align/1qcrH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.156866
/projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-14224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t2k-w0.5.mod (nostruct-align/1qcrJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.310875
/projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t2k-w0.5.mod(21):  Reading nostruct-align/1b87A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-19886/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t2k-w0.5.mod (nostruct-align/1b87A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.330862
/projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-w0.5.mod(22):  Reading nostruct-align/1f6bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8607/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-w0.5.mod (nostruct-align/1f6bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6bA/nostruct-align/1f6bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.384901
/projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t2k-w0.5.mod(22):  Reading nostruct-align/2liv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12311/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t2k-w0.5.mod (nostruct-align/2liv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.312874
/projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t2k-w0.5.mod(21):  Reading nostruct-align/1qcrK.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11065/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t2k-w0.5.mod (nostruct-align/1qcrK.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.257885
/projects/compbio/experiments/models.97/pdb/1j/1jhnA/nostruct-align/1jhnA.t2k-w0.5.mod(22):  Reading nostruct-align/1jhnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jhnA/nostruct-align/1jhnA.t2k-w0.5.mod (nostruct-align/1jhnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jhnA/nostruct-align/1jhnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.329859
/projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t2k-w0.5.mod(21):  Reading nostruct-align/1aqm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-4631/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t2k-w0.5.mod (nostruct-align/1aqm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.668888
/projects/compbio/experiments/models.97/pdb/1g/1g2hA/nostruct-align/1g2hA.t2k-w0.5.mod(21):  Reading nostruct-align/1g2hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13823/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2hA/nostruct-align/1g2hA.t2k-w0.5.mod (nostruct-align/1g2hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2hA/nostruct-align/1g2hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.457893
/projects/compbio/experiments/models.97/pdb/1d/1dbfA/nostruct-align/1dbfA.t2k-w0.5.mod(22):  Reading nostruct-align/1dbfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2245/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbfA/nostruct-align/1dbfA.t2k-w0.5.mod (nostruct-align/1dbfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbfA/nostruct-align/1dbfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.048904
/projects/compbio/experiments/models.97/pdb/1k/1k30A/nostruct-align/1k30A.t2k-w0.5.mod(22):  Reading nostruct-align/1k30A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k30A/nostruct-align/1k30A.t2k-w0.5.mod (nostruct-align/1k30A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k30A/nostruct-align/1k30A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.714870
/projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-w0.5.mod(22):  Reading nostruct-align/1qreA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-w0.5.mod (nostruct-align/1qreA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.632864
/projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t2k-w0.5.mod(22):  Reading nostruct-align/1pda.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t2k-w0.5.mod (nostruct-align/1pda.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.675863
/projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t2k-w0.5.mod(21):  Reading nostruct-align/1aqt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-4203/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t2k-w0.5.mod (nostruct-align/1aqt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.870880
/projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t2k-w0.5.mod(21):  Reading nostruct-align/1pdc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-6497/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t2k-w0.5.mod (nostruct-align/1pdc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.598864
/projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t2k-w0.5.mod(21):  Reading nostruct-align/1dipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20761/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t2k-w0.5.mod (nostruct-align/1dipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.498911
/projects/compbio/experiments/models.97/pdb/1h/1hj8A/nostruct-align/1hj8A.t2k-w0.5.mod(22):  Reading nostruct-align/1hj8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hj8A/nostruct-align/1hj8A.t2k-w0.5.mod (nostruct-align/1hj8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hj8A/nostruct-align/1hj8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.417902
/projects/compbio/experiments/models.97/pdb/1b/1bxnA/nostruct-align/1bxnA.t2k-w0.5.mod(21):  Reading nostruct-align/1bxnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxnA/nostruct-align/1bxnA.t2k-w0.5.mod (nostruct-align/1bxnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxnA/nostruct-align/1bxnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.900852
/projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t2k-w0.5.mod(21):  Reading nostruct-align/1dipB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16225/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t2k-w0.5.mod (nostruct-align/1dipB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.498911
/projects/compbio/experiments/models.97/pdb/1f/1fwxA/nostruct-align/1fwxA.t2k-w0.5.mod(22):  Reading nostruct-align/1fwxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21581/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwxA/nostruct-align/1fwxA.t2k-w0.5.mod (nostruct-align/1fwxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwxA/nostruct-align/1fwxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.772900
/projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-w0.5.mod(22):  Reading nostruct-align/4eugA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5531/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-w0.5.mod (nostruct-align/4eugA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.325869
/projects/compbio/experiments/models.97/pdb/1c/1cv2A/nostruct-align/1cv2A.t2k-w0.5.mod(21):  Reading nostruct-align/1cv2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2440/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cv2A/nostruct-align/1cv2A.t2k-w0.5.mod (nostruct-align/1cv2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cv2A/nostruct-align/1cv2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.282883
/projects/compbio/experiments/models.97/pdb/1e/1e2tA/nostruct-align/1e2tA.t2k-w0.5.mod(22):  Reading nostruct-align/1e2tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-7619/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2tA/nostruct-align/1e2tA.t2k-w0.5.mod (nostruct-align/1e2tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2tA/nostruct-align/1e2tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.811857
/projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-w0.5.mod(21):  Reading nostruct-align/1e42A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-w0.5.mod (nostruct-align/1e42A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e42A/nostruct-align/1e42A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.945908
/projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t2k-w0.5.mod(21):  Reading nostruct-align/1mdiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-18329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t2k-w0.5.mod (nostruct-align/1mdiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.472858
/projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k-w0.5.mod(22):  Reading nostruct-align/1bd0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k-w0.5.mod (nostruct-align/1bd0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.538893
/projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t2k-w0.5.mod(22):  Reading nostruct-align/1qcsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t2k-w0.5.mod (nostruct-align/1qcsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.445904
/projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-w0.5.mod(21):  Reading nostruct-align/1pdo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-27573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-w0.5.mod (nostruct-align/1pdo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.268908
/projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t2k-w0.5.mod(21):  Reading nostruct-align/2std.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-7453/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t2k-w0.5.mod (nostruct-align/2std.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.039871
/projects/compbio/experiments/models.97/pdb/1f/1f08A/nostruct-align/1f08A.t2k-w0.5.mod(22):  Reading nostruct-align/1f08A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23853/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f08A/nostruct-align/1f08A.t2k-w0.5.mod (nostruct-align/1f08A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f08A/nostruct-align/1f08A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.747879
/projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-w0.5.mod(22):  Reading nostruct-align/1arb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-11492/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-w0.5.mod (nostruct-align/1arb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.989899
/projects/compbio/experiments/models.97/pdb/1h/1hpcA/nostruct-align/1hpcA.t2k-w0.5.mod(22):  Reading nostruct-align/1hpcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19093/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpcA/nostruct-align/1hpcA.t2k-w0.5.mod (nostruct-align/1hpcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hpcA/nostruct-align/1hpcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.989910
/projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t2k-w0.5.mod(21):  Reading nostruct-align/1pdr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-13352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t2k-w0.5.mod (nostruct-align/1pdr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.811888
/projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t2k-w0.5.mod(21):  Reading nostruct-align/1dr8B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-7526/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t2k-w0.5.mod (nostruct-align/1dr8B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.797876
/projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t2k-w0.5.mod(21):  Reading nostruct-align/1ard.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-31553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t2k-w0.5.mod (nostruct-align/1ard.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.187855
/projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t2k-w0.5.mod(21):  Reading nostruct-align/2bi6H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29102/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t2k-w0.5.mod (nostruct-align/2bi6H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.580873
/projects/compbio/experiments/models.97/pdb/1i/1i9gA/nostruct-align/1i9gA.t2k-w0.5.mod(22):  Reading nostruct-align/1i9gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9gA/nostruct-align/1i9gA.t2k-w0.5.mod (nostruct-align/1i9gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i9gA/nostruct-align/1i9gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.189880
/projects/compbio/experiments/models.97/pdb/1p/1pdz/nostruct-align/1pdz.t2k-w0.5.mod(22):  Reading nostruct-align/1pdz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pdz/nostruct-align/1pdz.t2k-w0.5.mod (nostruct-align/1pdz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pdz/nostruct-align/1pdz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.982901
/projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t2k-w0.5.mod(21):  Reading nostruct-align/1ark.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-9902/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t2k-w0.5.mod (nostruct-align/1ark.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.528854
/projects/compbio/experiments/models.97/pdb/1g/1g2iA/nostruct-align/1g2iA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2iA/nostruct-align/1g2iA.t2k-w0.5.mod (nostruct-align/1g2iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2iA/nostruct-align/1g2iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.221870
/projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t2k-w0.5.mod(22):  Reading nostruct-align/1dbgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t2k-w0.5.mod (nostruct-align/1dbgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.105904
/projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t2k-w0.5.mod(22):  Reading nostruct-align/1at0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11564/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t2k-w0.5.mod (nostruct-align/1at0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.416855
/projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k-w0.5.mod(22):  Reading nostruct-align/1ars.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14614/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k-w0.5.mod (nostruct-align/1ars.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ars/nostruct-align/1ars.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.849876
/projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-w0.5.mod(22):  Reading nostruct-align/1fpoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12410/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-w0.5.mod (nostruct-align/1fpoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fpoA/nostruct-align/1fpoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.409895
/projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t2k-w0.5.mod(22):  Reading nostruct-align/1pea.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28169/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t2k-w0.5.mod (nostruct-align/1pea.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.613855
/projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t2k-w0.5.mod(22):  Reading nostruct-align/1art.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t2k-w0.5.mod (nostruct-align/1art.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.727900
/projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t2k-w0.5.mod(22):  Reading nostruct-align/2stv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19863/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t2k-w0.5.mod (nostruct-align/2stv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.627869
/projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t2k-w0.5.mod(21):  Reading nostruct-align/1joyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t2k-w0.5.mod (nostruct-align/1joyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.173882
/projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t2k-w0.5.mod(22):  Reading nostruct-align/1aru.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22375/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t2k-w0.5.mod (nostruct-align/1aru.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.626877
/projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t2k-w0.5.mod(21):  Reading nostruct-align/1arv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t2k-w0.5.mod (nostruct-align/1arv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.736889
/projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t2k-w0.5.mod(21):  Reading nostruct-align/1c25.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-28798/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t2k-w0.5.mod (nostruct-align/1c25.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.938862
/projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t2k-w0.5.mod(21):  Reading nostruct-align/1cmkE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-30044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t2k-w0.5.mod (nostruct-align/1cmkE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.799868
/projects/compbio/experiments/models.97/pdb/1h/1hj9A/nostruct-align/1hj9A.t2k-w0.5.mod(22):  Reading nostruct-align/1hj9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hj9A/nostruct-align/1hj9A.t2k-w0.5.mod (nostruct-align/1hj9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hj9A/nostruct-align/1hj9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.450874
/projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t2k-w0.5.mod(21):  Reading nostruct-align/1peh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-749/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t2k-w0.5.mod (nostruct-align/1peh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.705885
/projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t2k-w0.5.mod(22):  Reading nostruct-align/1bxoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1689/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t2k-w0.5.mod (nostruct-align/1bxoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.860891
/projects/compbio/experiments/models.97/pdb/1p/1pei/nostruct-align/1pei.t2k-w0.5.mod(21):  Reading nostruct-align/1pei.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10476/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pei/nostruct-align/1pei.t2k-w0.5.mod (nostruct-align/1pei.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pei/nostruct-align/1pei.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.907885
/projects/compbio/experiments/models.97/pdb/1f/1fy7A/nostruct-align/1fy7A.t2k-w0.5.mod(22):  Reading nostruct-align/1fy7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9796/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fy7A/nostruct-align/1fy7A.t2k-w0.5.mod (nostruct-align/1fy7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fy7A/nostruct-align/1fy7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.843904
/projects/compbio/experiments/models.97/pdb/1f/1fwyA/nostruct-align/1fwyA.t2k-w0.5.mod(21):  Reading nostruct-align/1fwyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fwyA/nostruct-align/1fwyA.t2k-w0.5.mod (nostruct-align/1fwyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fwyA/nostruct-align/1fwyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.353886
/projects/compbio/experiments/models.97/pdb/1e/1eg5A/nostruct-align/1eg5A.t2k-w0.5.mod(22):  Reading nostruct-align/1eg5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-28380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg5A/nostruct-align/1eg5A.t2k-w0.5.mod (nostruct-align/1eg5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eg5A/nostruct-align/1eg5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.954882
/projects/compbio/experiments/models.97/pdb/1e/1e2uA/nostruct-align/1e2uA.t2k-w0.5.mod(22):  Reading nostruct-align/1e2uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12262/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2uA/nostruct-align/1e2uA.t2k-w0.5.mod (nostruct-align/1e2uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2uA/nostruct-align/1e2uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.099880
/projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-w0.5.mod(21):  Reading nostruct-align/1e43A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-24430/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-w0.5.mod (nostruct-align/1e43A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e43A/nostruct-align/1e43A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.451899
/projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t2k-w0.5.mod(21):  Reading nostruct-align/1wod.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-20372/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t2k-w0.5.mod (nostruct-align/1wod.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.594854
/projects/compbio/experiments/models.97/pdb/1d/1dr9A/nostruct-align/1dr9A.t2k-w0.5.mod(21):  Reading nostruct-align/1dr9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-1768/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dr9A/nostruct-align/1dr9A.t2k-w0.5.mod (nostruct-align/1dr9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dr9A/nostruct-align/1dr9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.154896
/projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t2k-w0.5.mod(22):  Reading nostruct-align/1ash.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5130/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t2k-w0.5.mod (nostruct-align/1ash.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.676908
/projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t2k-w0.5.mod(21):  Reading nostruct-align/1pex.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-7244/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t2k-w0.5.mod (nostruct-align/1pex.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.500856
/projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t2k-w0.5.mod(22):  Reading nostruct-align/1b89A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2440/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t2k-w0.5.mod (nostruct-align/1b89A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.337908
/projects/compbio/experiments/models.97/pdb/1f/1f6dA/nostruct-align/1f6dA.t2k-w0.5.mod(22):  Reading nostruct-align/1f6dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14238/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6dA/nostruct-align/1f6dA.t2k-w0.5.mod (nostruct-align/1f6dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6dA/nostruct-align/1f6dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.523909
/projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t2k-w0.5.mod(21):  Reading nostruct-align/3pcgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-9415/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t2k-w0.5.mod (nostruct-align/3pcgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.718906
/projects/compbio/experiments/models.97/pdb/1p/1pvaA/nostruct-align/1pvaA.t2k-w0.5.mod(21):  Reading nostruct-align/1pvaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-2645/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvaA/nostruct-align/1pvaA.t2k-w0.5.mod (nostruct-align/1pvaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvaA/nostruct-align/1pvaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.464899
/projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t2k-w0.5.mod(21):  Reading nostruct-align/1bbt1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-16113/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t2k-w0.5.mod (nostruct-align/1bbt1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.549894
/projects/compbio/experiments/models.97/pdb/1k/1k32A/nostruct-align/1k32A.t2k-w0.5.mod(22):  Reading nostruct-align/1k32A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-31699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k32A/nostruct-align/1k32A.t2k-w0.5.mod (nostruct-align/1k32A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k32A/nostruct-align/1k32A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.588902
/projects/compbio/experiments/models.97/pdb/1d/1dbhA/nostruct-align/1dbhA.t2k-w0.5.mod(22):  Reading nostruct-align/1dbhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-2290/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbhA/nostruct-align/1dbhA.t2k-w0.5.mod (nostruct-align/1dbhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbhA/nostruct-align/1dbhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.645899
/projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t2k-w0.5.mod(21):  Reading nostruct-align/1bbt3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-21456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t2k-w0.5.mod (nostruct-align/1bbt3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.904894
/projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t2k-w0.5.mod(22):  Reading nostruct-align/1ass.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24603/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t2k-w0.5.mod (nostruct-align/1ass.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.175856
/projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t2k-w0.5.mod(21):  Reading nostruct-align/1ast.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t2k-w0.5.mod (nostruct-align/1ast.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.456903
/projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t2k-w0.5.mod(21):  Reading nostruct-align/1asu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-3984/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t2k-w0.5.mod (nostruct-align/1asu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.975895
/projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t2k-w0.5.mod(21):  Reading nostruct-align/3pcgM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-2570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t2k-w0.5.mod (nostruct-align/3pcgM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.004850
/projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t2k-w0.5.mod(21):  Reading nostruct-align/1asx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-29911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t2k-w0.5.mod (nostruct-align/1asx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.068897
/projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-w0.5.mod(22):  Reading nostruct-align/1dk0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4429/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-w0.5.mod (nostruct-align/1dk0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dk0A/nostruct-align/1dk0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.077860
/projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t2k-w0.5.mod(22):  Reading nostruct-align/2ebn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-10043/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t2k-w0.5.mod (nostruct-align/2ebn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.256910
/projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-w0.5.mod(21):  Reading nostruct-align/1eexA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9451/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-w0.5.mod (nostruct-align/1eexA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eexA/nostruct-align/1eexA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.479877
/projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-w0.5.mod(22):  Reading nostruct-align/1eexB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-w0.5.mod (nostruct-align/1eexB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eexB/nostruct-align/1eexB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.938862
/projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ieaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t2k-w0.5.mod (nostruct-align/1ieaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.658876
/projects/compbio/experiments/models.97/pdb/1e/1e44B/nostruct-align/1e44B.t2k-w0.5.mod(22):  Reading nostruct-align/1e44B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5545/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e44B/nostruct-align/1e44B.t2k-w0.5.mod (nostruct-align/1e44B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e44B/nostruct-align/1e44B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.615911
/projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-w0.5.mod(22):  Reading nostruct-align/1qe3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11710/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-w0.5.mod (nostruct-align/1qe3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qe3A/nostruct-align/1qe3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.301851
/projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t2k-w0.5.mod(22):  Reading nostruct-align/1pfo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26110/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t2k-w0.5.mod (nostruct-align/1pfo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.317879
/projects/compbio/experiments/models.97/pdb/1k/1ksiA/nostruct-align/1ksiA.t2k-w0.5.mod(22):  Reading nostruct-align/1ksiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ksiA/nostruct-align/1ksiA.t2k-w0.5.mod (nostruct-align/1ksiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ksiA/nostruct-align/1ksiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.507856
/projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t2k-w0.5.mod(21):  Reading nostruct-align/1b10A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-18126/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t2k-w0.5.mod (nostruct-align/1b10A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.465879
/projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t2k-w0.5.mod(22):  Reading nostruct-align/1ksiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-10471/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t2k-w0.5.mod (nostruct-align/1ksiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.026854
/projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t2k-w0.5.mod(21):  Reading nostruct-align/1ata.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25769/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t2k-w0.5.mod (nostruct-align/1ata.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.997890
/projects/compbio/experiments/models.97/pdb/1b/1bd2D/nostruct-align/1bd2D.t2k-w0.5.mod(21):  Reading nostruct-align/1bd2D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd2D/nostruct-align/1bd2D.t2k-w0.5.mod (nostruct-align/1bd2D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bd2D/nostruct-align/1bd2D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.616888
/projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-w0.5.mod(22):  Reading nostruct-align/1eexG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-w0.5.mod (nostruct-align/1eexG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eexG/nostruct-align/1eexG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.481895
/projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t2k-w0.5.mod(21):  Reading nostruct-align/1a3lH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-16928/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t2k-w0.5.mod (nostruct-align/1a3lH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.366905
/projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ao6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-20803/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t2k-w0.5.mod (nostruct-align/1ao6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.127901
/projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t2k-w0.5.mod(21):  Reading nostruct-align/1pft.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13722/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t2k-w0.5.mod (nostruct-align/1pft.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.300880
/projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t2k-w0.5.mod(21):  Reading nostruct-align/1a3lL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2851/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t2k-w0.5.mod (nostruct-align/1a3lL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.382864
/projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-w0.5.mod(22):  Reading nostruct-align/1atg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-w0.5.mod (nostruct-align/1atg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.182907
/projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k-w0.5.mod(22):  Reading nostruct-align/1dxeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27397/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k-w0.5.mod (nostruct-align/1dxeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxeA/nostruct-align/1dxeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.400873
/projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t2k-w0.5.mod(21):  Reading nostruct-align/3pchA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-14852/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t2k-w0.5.mod (nostruct-align/3pchA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.781853
/projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-w0.5.mod(22):  Reading nostruct-align/1isuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-w0.5.mod (nostruct-align/1isuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.118868
/projects/compbio/experiments/models.97/pdb/1d/1dbiA/nostruct-align/1dbiA.t2k-w0.5.mod(21):  Reading nostruct-align/1dbiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-26632/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbiA/nostruct-align/1dbiA.t2k-w0.5.mod (nostruct-align/1dbiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbiA/nostruct-align/1dbiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.734869
/projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t2k-w0.5.mod(21):  Reading nostruct-align/2shpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-2377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t2k-w0.5.mod (nostruct-align/2shpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.575874
/projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t2k-w0.5.mod(22):  Reading nostruct-align/1scjB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-5144/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t2k-w0.5.mod (nostruct-align/1scjB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.614891
/projects/compbio/experiments/models.97/pdb/1f/1fpqA/nostruct-align/1fpqA.t2k-w0.5.mod(22):  Reading nostruct-align/1fpqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpqA/nostruct-align/1fpqA.t2k-w0.5.mod (nostruct-align/1fpqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fpqA/nostruct-align/1fpqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.120880
/projects/compbio/experiments/models.97/pdb/1a/1av3/nostruct-align/1av3.t2k-w0.5.mod(22):  Reading nostruct-align/1av3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-24326/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1av3/nostruct-align/1av3.t2k-w0.5.mod (nostruct-align/1av3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1av3/nostruct-align/1av3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.825878
/projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t2k-w0.5.mod(21):  Reading nostruct-align/2ech.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-31596/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t2k-w0.5.mod (nostruct-align/2ech.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.835901
/projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t2k-w0.5.mod(21):  Reading nostruct-align/3pchM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t2k-w0.5.mod (nostruct-align/3pchM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.059891
/projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t2k-w0.5.mod(21):  Reading nostruct-align/1atx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19541/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t2k-w0.5.mod (nostruct-align/1atx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.260860
/projects/compbio/experiments/models.97/pdb/1g/1g9uA/nostruct-align/1g9uA.t2k-w0.5.mod(22):  Reading nostruct-align/1g9uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-23019/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9uA/nostruct-align/1g9uA.t2k-w0.5.mod (nostruct-align/1g9uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g9uA/nostruct-align/1g9uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -46.893860
/projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t2k-w0.5.mod(21):  Reading nostruct-align/3aig.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t2k-w0.5.mod (nostruct-align/3aig.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.296906
/projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t2k-w0.5.mod(21):  Reading nostruct-align/1aty.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16585/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t2k-w0.5.mod (nostruct-align/1aty.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.091906
/projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t2k-w0.5.mod(21):  Reading nostruct-align/7ahlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-8561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t2k-w0.5.mod (nostruct-align/7ahlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.226902
/projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t2k-w0.5.mod(21):  Reading nostruct-align/1afoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t2k-w0.5.mod (nostruct-align/1afoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.440866
/projects/compbio/experiments/models.97/pdb/1e/1eg7A/nostruct-align/1eg7A.t2k-w0.5.mod(22):  Reading nostruct-align/1eg7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg7A/nostruct-align/1eg7A.t2k-w0.5.mod (nostruct-align/1eg7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eg7A/nostruct-align/1eg7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.714899
/projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-w0.5.mod(21):  Reading nostruct-align/1e2wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-18113/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-w0.5.mod (nostruct-align/1e2wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2wA/nostruct-align/1e2wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.368851
/projects/compbio/experiments/models.97/pdb/1r/1ruxA/nostruct-align/1ruxA.t2k-w0.5.mod(22):  Reading nostruct-align/1ruxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ruxA/nostruct-align/1ruxA.t2k-w0.5.mod (nostruct-align/1ruxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ruxA/nostruct-align/1ruxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.997879
/projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t2k-w0.5.mod(22):  Reading nostruct-align/1pvc1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20162/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t2k-w0.5.mod (nostruct-align/1pvc1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.827854
/projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t2k-w0.5.mod(22):  Reading nostruct-align/1bd3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23057/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t2k-w0.5.mod (nostruct-align/1bd3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.391899
/projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t2k-w0.5.mod(21):  Reading nostruct-align/1pvc2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-28506/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t2k-w0.5.mod (nostruct-align/1pvc2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.773869
/projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t2k-w0.5.mod(21):  Reading nostruct-align/1pvc3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15171/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t2k-w0.5.mod (nostruct-align/1pvc3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.208910
/projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t2k-w0.5.mod(22):  Reading nostruct-align/1aua.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t2k-w0.5.mod (nostruct-align/1aua.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.804853
/projects/compbio/experiments/models.97/pdb/1o/1ortA/nostruct-align/1ortA.t2k-w0.5.mod(22):  Reading nostruct-align/1ortA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23988/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ortA/nostruct-align/1ortA.t2k-w0.5.mod (nostruct-align/1ortA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ortA/nostruct-align/1ortA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.605858
/projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t2k-w0.5.mod(21):  Reading nostruct-align/1pvc4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-7019/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t2k-w0.5.mod (nostruct-align/1pvc4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.011866
/projects/compbio/experiments/models.97/pdb/3a/3ait/nostruct-align/3ait.t2k-w0.5.mod(21):  Reading nostruct-align/3ait.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-17868/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3a/3ait/nostruct-align/3ait.t2k-w0.5.mod (nostruct-align/3ait.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3a/3ait/nostruct-align/3ait.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.600899
/projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-w0.5.mod(22):  Reading nostruct-align/1pgs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-w0.5.mod (nostruct-align/1pgs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.351858
/projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-w0.5.mod(21):  Reading nostruct-align/1lopA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-27435/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-w0.5.mod (nostruct-align/1lopA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.694870
/projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t2k-w0.5.mod(21):  Reading nostruct-align/1c3d.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-4543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t2k-w0.5.mod (nostruct-align/1c3d.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.520851
/projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t2k-w0.5.mod(21):  Reading nostruct-align/1pi2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t2k-w0.5.mod (nostruct-align/1pi2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.807867
/projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t2k-w0.5.mod(21):  Reading nostruct-align/4lbd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21382/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t2k-w0.5.mod (nostruct-align/4lbd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.070854
/projects/compbio/experiments/models.97/pdb/1f/1f6fA/nostruct-align/1f6fA.t2k-w0.5.mod(21):  Reading nostruct-align/1f6fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6fA/nostruct-align/1f6fA.t2k-w0.5.mod (nostruct-align/1f6fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6fA/nostruct-align/1f6fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.889875
/projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t2k-w0.5.mod(22):  Reading nostruct-align/1auk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-30621/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t2k-w0.5.mod (nostruct-align/1auk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.664902
/projects/compbio/experiments/models.97/pdb/1f/1f6fB/nostruct-align/1f6fB.t2k-w0.5.mod(22):  Reading nostruct-align/1f6fB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6fB/nostruct-align/1f6fB.t2k-w0.5.mod (nostruct-align/1f6fB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6fB/nostruct-align/1f6fB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.705893
/projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t2k-w0.5.mod(22):  Reading nostruct-align/1rgeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2214/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t2k-w0.5.mod (nostruct-align/1rgeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.213892
/projects/compbio/experiments/models.97/pdb/1a/1aun/nostruct-align/1aun.t2k-w0.5.mod(21):  Reading nostruct-align/1aun.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28478/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aun/nostruct-align/1aun.t2k-w0.5.mod (nostruct-align/1aun.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aun/nostruct-align/1aun.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.198891
/projects/compbio/experiments/models.97/pdb/1g/1g2lA/nostruct-align/1g2lA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21678/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2lA/nostruct-align/1g2lA.t2k-w0.5.mod (nostruct-align/1g2lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2lA/nostruct-align/1g2lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.959864
/projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t2k-w0.5.mod(21):  Reading nostruct-align/1kdxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17589/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t2k-w0.5.mod (nostruct-align/1kdxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.457899
/projects/compbio/experiments/models.97/pdb/1k/1kf6B/nostruct-align/1kf6B.t2k-w0.5.mod(22):  Reading nostruct-align/1kf6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20315/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kf6B/nostruct-align/1kf6B.t2k-w0.5.mod (nostruct-align/1kf6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kf6B/nostruct-align/1kf6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.187874
/projects/compbio/experiments/models.97/pdb/1k/1kdxB/nostruct-align/1kdxB.t2k-w0.5.mod(22):  Reading nostruct-align/1kdxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdxB/nostruct-align/1kdxB.t2k-w0.5.mod (nostruct-align/1kdxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kdxB/nostruct-align/1kdxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.518856
/projects/compbio/experiments/models.97/pdb/1k/1k34A/nostruct-align/1k34A.t2k-w0.5.mod(21):  Reading nostruct-align/1k34A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-18689/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k34A/nostruct-align/1k34A.t2k-w0.5.mod (nostruct-align/1k34A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k34A/nostruct-align/1k34A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.975870
/projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t2k-w0.5.mod(21):  Reading nostruct-align/1auq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-20588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t2k-w0.5.mod (nostruct-align/1auq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.487883
/projects/compbio/experiments/models.97/pdb/1k/1kf6D/nostruct-align/1kf6D.t2k-w0.5.mod(22):  Reading nostruct-align/1kf6D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kf6D/nostruct-align/1kf6D.t2k-w0.5.mod (nostruct-align/1kf6D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kf6D/nostruct-align/1kf6D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.915867
/projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t2k-w0.5.mod(21):  Reading nostruct-align/1aw0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t2k-w0.5.mod (nostruct-align/1aw0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.625893
/projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t2k-w0.5.mod(22):  Reading nostruct-align/1c52.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1430/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t2k-w0.5.mod (nostruct-align/1c52.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.937893
/projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t2k-w0.5.mod(21):  Reading nostruct-align/1phb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24183/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t2k-w0.5.mod (nostruct-align/1phb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.492905
/projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t2k-w0.5.mod(21):  Reading nostruct-align/1c53.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t2k-w0.5.mod (nostruct-align/1c53.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.386868
/projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t2k-w0.5.mod(21):  Reading nostruct-align/1cmnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-21770/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t2k-w0.5.mod (nostruct-align/1cmnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.743870
/projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t2k-w0.5.mod(21):  Reading nostruct-align/1phd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t2k-w0.5.mod (nostruct-align/1phd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.806873
/projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t2k-w0.5.mod(22):  Reading nostruct-align/1aw5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-4782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t2k-w0.5.mod (nostruct-align/1aw5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.682896
/projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t2k-w0.5.mod(22):  Reading nostruct-align/1bqhG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-1955/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t2k-w0.5.mod (nostruct-align/1bqhG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.101862
/projects/compbio/experiments/models.97/pdb/1a/1aw6/nostruct-align/1aw6.t2k-w0.5.mod(21):  Reading nostruct-align/1aw6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-23830/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw6/nostruct-align/1aw6.t2k-w0.5.mod (nostruct-align/1aw6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw6/nostruct-align/1aw6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.244875
/projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t2k-w0.5.mod(21):  Reading nostruct-align/4sli.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13828/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t2k-w0.5.mod (nostruct-align/4sli.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.108892
/projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t2k-w0.5.mod(21):  Reading nostruct-align/1phg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-30055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t2k-w0.5.mod (nostruct-align/1phg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.601879
/projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t2k-w0.5.mod(21):  Reading nostruct-align/1bxrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-14448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t2k-w0.5.mod (nostruct-align/1bxrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.228874
/projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t2k-w0.5.mod(21):  Reading nostruct-align/1auz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t2k-w0.5.mod (nostruct-align/1auz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.309895
/projects/compbio/experiments/models.97/pdb/1a/1aw9/nostruct-align/1aw9.t2k-w0.5.mod(21):  Reading nostruct-align/1aw9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-25756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw9/nostruct-align/1aw9.t2k-w0.5.mod (nostruct-align/1aw9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw9/nostruct-align/1aw9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.609901
/projects/compbio/experiments/models.97/pdb/1p/1phk/nostruct-align/1phk.t2k-w0.5.mod(21):  Reading nostruct-align/1phk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-12712/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phk/nostruct-align/1phk.t2k-w0.5.mod (nostruct-align/1phk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phk/nostruct-align/1phk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.633884
/projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t2k-w0.5.mod(22):  Reading nostruct-align/1phm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11861/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t2k-w0.5.mod (nostruct-align/1phm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.137905
/projects/compbio/experiments/models.97/pdb/1e/1e2xA/nostruct-align/1e2xA.t2k-w0.5.mod(21):  Reading nostruct-align/1e2xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2xA/nostruct-align/1e2xA.t2k-w0.5.mod (nostruct-align/1e2xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2xA/nostruct-align/1e2xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.963871
/projects/compbio/experiments/models.97/pdb/1k/1kskA/nostruct-align/1kskA.t2k-w0.5.mod(22):  Reading nostruct-align/1kskA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-17583/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kskA/nostruct-align/1kskA.t2k-w0.5.mod (nostruct-align/1kskA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kskA/nostruct-align/1kskA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.883871
/projects/compbio/experiments/models.97/pdb/1q/1qe5A/nostruct-align/1qe5A.t2k-w0.5.mod(21):  Reading nostruct-align/1qe5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-5248/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qe5A/nostruct-align/1qe5A.t2k-w0.5.mod (nostruct-align/1qe5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qe5A/nostruct-align/1qe5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.234865
/projects/compbio/experiments/models.97/pdb/1q/1qcwA/nostruct-align/1qcwA.t2k-w0.5.mod(21):  Reading nostruct-align/1qcwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-22553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcwA/nostruct-align/1qcwA.t2k-w0.5.mod (nostruct-align/1qcwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcwA/nostruct-align/1qcwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.350853
/projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t2k-w0.5.mod(22):  Reading nostruct-align/1b12A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-339/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t2k-w0.5.mod (nostruct-align/1b12A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.977890
/projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t2k-w0.5.mod(21):  Reading nostruct-align/1php.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27880/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t2k-w0.5.mod (nostruct-align/1php.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.315868
/projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t2k-w0.5.mod(21):  Reading nostruct-align/1phr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2776/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t2k-w0.5.mod (nostruct-align/1phr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.138870
/projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t2k-w0.5.mod(21):  Reading nostruct-align/1hpgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t2k-w0.5.mod (nostruct-align/1hpgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.981903
/projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t2k-w0.5.mod(21):  Reading nostruct-align/1avc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-4269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t2k-w0.5.mod (nostruct-align/1avc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.853891
/projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t2k-w0.5.mod(22):  Reading nostruct-align/1pht.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-6486/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t2k-w0.5.mod (nostruct-align/1pht.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.595861
/projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t2k-w0.5.mod(22):  Reading nostruct-align/1kzuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-3901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t2k-w0.5.mod (nostruct-align/1kzuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.759857
/projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t2k-w0.5.mod(21):  Reading nostruct-align/2sxl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-32013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t2k-w0.5.mod (nostruct-align/2sxl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.477871
/projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t2k-w0.5.mod(22):  Reading nostruct-align/1kzuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t2k-w0.5.mod (nostruct-align/1kzuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.198885
/projects/compbio/experiments/models.97/pdb/1a/1avk/nostruct-align/1avk.t2k-w0.5.mod(21):  Reading nostruct-align/1avk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26144/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avk/nostruct-align/1avk.t2k-w0.5.mod (nostruct-align/1avk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avk/nostruct-align/1avk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.171867
/projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t2k-w0.5.mod(22):  Reading nostruct-align/1dxgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t2k-w0.5.mod (nostruct-align/1dxgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.044909
/projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t2k-w0.5.mod(21):  Reading nostruct-align/2nmbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16425/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t2k-w0.5.mod (nostruct-align/2nmbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.546898
/projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-w0.5.mod(22):  Reading nostruct-align/1c3cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-w0.5.mod (nostruct-align/1c3cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.541893
/projects/compbio/experiments/models.97/pdb/1p/1pvdA/nostruct-align/1pvdA.t2k-w0.5.mod(22):  Reading nostruct-align/1pvdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24575/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvdA/nostruct-align/1pvdA.t2k-w0.5.mod (nostruct-align/1pvdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvdA/nostruct-align/1pvdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.800892
/projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t2k-w0.5.mod(21):  Reading nostruct-align/1ax0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30172/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t2k-w0.5.mod (nostruct-align/1ax0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.722883
/projects/compbio/experiments/models.97/pdb/1f/1fr1A/nostruct-align/1fr1A.t2k-w0.5.mod(21):  Reading nostruct-align/1fr1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-26981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr1A/nostruct-align/1fr1A.t2k-w0.5.mod (nostruct-align/1fr1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fr1A/nostruct-align/1fr1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.100853
/projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t2k-w0.5.mod(22):  Reading nostruct-align/2admA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19936/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t2k-w0.5.mod (nostruct-align/2admA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.844852
/projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t2k-w0.5.mod(21):  Reading nostruct-align/1qrjB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t2k-w0.5.mod (nostruct-align/1qrjB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.538876
/projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t2k-w0.5.mod(21):  Reading nostruct-align/1cmoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-5570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t2k-w0.5.mod (nostruct-align/1cmoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.321863
/projects/compbio/experiments/models.97/pdb/1p/1pih/nostruct-align/1pih.t2k-w0.5.mod(21):  Reading nostruct-align/1pih.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pih/nostruct-align/1pih.t2k-w0.5.mod (nostruct-align/1pih.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pih/nostruct-align/1pih.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.431883
/projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t2k-w0.5.mod(22):  Reading nostruct-align/1ax8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-8307/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t2k-w0.5.mod (nostruct-align/1ax8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.518862
/projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t2k-w0.5.mod(21):  Reading nostruct-align/1pii.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t2k-w0.5.mod (nostruct-align/1pii.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.508881
/projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t2k-w0.5.mod(21):  Reading nostruct-align/1pij.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-4822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t2k-w0.5.mod (nostruct-align/1pij.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.400860
/projects/compbio/experiments/models.97/pdb/1j/1jj21/nostruct-align/1jj21.t2k-w0.5.mod(22):  Reading nostruct-align/1jj21.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj21/nostruct-align/1jj21.t2k-w0.5.mod (nostruct-align/1jj21.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj21/nostruct-align/1jj21.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.143867
/projects/compbio/experiments/models.97/pdb/1j/1jj22/nostruct-align/1jj22.t2k-w0.5.mod(22):  Reading nostruct-align/1jj22.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18242/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj22/nostruct-align/1jj22.t2k-w0.5.mod (nostruct-align/1jj22.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj22/nostruct-align/1jj22.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.541887
/projects/compbio/experiments/models.97/pdb/1e/1eg9A/nostruct-align/1eg9A.t2k-w0.5.mod(22):  Reading nostruct-align/1eg9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg9A/nostruct-align/1eg9A.t2k-w0.5.mod (nostruct-align/1eg9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eg9A/nostruct-align/1eg9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.384871
/projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t2k-w0.5.mod(21):  Reading nostruct-align/1pil.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-18821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t2k-w0.5.mod (nostruct-align/1pil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.234875
/projects/compbio/experiments/models.97/pdb/1e/1eg9B/nostruct-align/1eg9B.t2k-w0.5.mod(22):  Reading nostruct-align/1eg9B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25858/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eg9B/nostruct-align/1eg9B.t2k-w0.5.mod (nostruct-align/1eg9B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eg9B/nostruct-align/1eg9B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.244877
/projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k-w0.5.mod(22):  Reading nostruct-align/1qcxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3915/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k-w0.5.mod (nostruct-align/1qcxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.745865
/projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t2k-w0.5.mod(21):  Reading nostruct-align/1c5a.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t2k-w0.5.mod (nostruct-align/1c5a.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.468853
/projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t2k-w0.5.mod(21):  Reading nostruct-align/1awd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-1060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t2k-w0.5.mod (nostruct-align/1awd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.051886
/projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t2k-w0.5.mod(21):  Reading nostruct-align/1awe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t2k-w0.5.mod (nostruct-align/1awe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.693874
/projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t2k-w0.5.mod(21):  Reading nostruct-align/1pk4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t2k-w0.5.mod (nostruct-align/1pk4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.050911
/projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t2k-w0.5.mod(21):  Reading nostruct-align/1awj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6054/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t2k-w0.5.mod (nostruct-align/1awj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.681875
/projects/compbio/experiments/models.97/pdb/1j/1jj2A/nostruct-align/1jj2A.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-24628/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2A/nostruct-align/1jj2A.t2k-w0.5.mod (nostruct-align/1jj2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2A/nostruct-align/1jj2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.647877
/projects/compbio/experiments/models.97/pdb/1j/1jj2B/nostruct-align/1jj2B.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21906/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2B/nostruct-align/1jj2B.t2k-w0.5.mod (nostruct-align/1jj2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2B/nostruct-align/1jj2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.635885
/projects/compbio/experiments/models.97/pdb/1j/1jj2C/nostruct-align/1jj2C.t2k-w0.5.mod(21):  Reading nostruct-align/1jj2C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2C/nostruct-align/1jj2C.t2k-w0.5.mod (nostruct-align/1jj2C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2C/nostruct-align/1jj2C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.170860
/projects/compbio/experiments/models.97/pdb/1h/1hy0A/nostruct-align/1hy0A.t2k-w0.5.mod(21):  Reading nostruct-align/1hy0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-10817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy0A/nostruct-align/1hy0A.t2k-w0.5.mod (nostruct-align/1hy0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hy0A/nostruct-align/1hy0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.605860
/projects/compbio/experiments/models.97/pdb/1j/1jj2D/nostruct-align/1jj2D.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2D/nostruct-align/1jj2D.t2k-w0.5.mod (nostruct-align/1jj2D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2D/nostruct-align/1jj2D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.876907
/projects/compbio/experiments/models.97/pdb/1j/1jj2E/nostruct-align/1jj2E.t2k-w0.5.mod(21):  Reading nostruct-align/1jj2E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12465/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2E/nostruct-align/1jj2E.t2k-w0.5.mod (nostruct-align/1jj2E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2E/nostruct-align/1jj2E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.430897
/projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-w0.5.mod(21):  Reading nostruct-align/1g2nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12446/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-w0.5.mod (nostruct-align/1g2nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2nA/nostruct-align/1g2nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.641878
/projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t2k-w0.5.mod(21):  Reading nostruct-align/1awo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-8424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t2k-w0.5.mod (nostruct-align/1awo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.501904
/projects/compbio/experiments/models.97/pdb/1j/1jj2F/nostruct-align/1jj2F.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2F/nostruct-align/1jj2F.t2k-w0.5.mod (nostruct-align/1jj2F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2F/nostruct-align/1jj2F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.203880
/projects/compbio/experiments/models.97/pdb/1j/1jj2G/nostruct-align/1jj2G.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2G/nostruct-align/1jj2G.t2k-w0.5.mod (nostruct-align/1jj2G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2G/nostruct-align/1jj2G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.973898
/projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t2k-w0.5.mod(21):  Reading nostruct-align/1scmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-3564/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t2k-w0.5.mod (nostruct-align/1scmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.044895
/projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t2k-w0.5.mod(21):  Reading nostruct-align/1msaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-6175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t2k-w0.5.mod (nostruct-align/1msaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.724863
/projects/compbio/experiments/models.97/pdb/1j/1jj2H/nostruct-align/1jj2H.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2H/nostruct-align/1jj2H.t2k-w0.5.mod (nostruct-align/1jj2H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2H/nostruct-align/1jj2H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.903896
/projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t2k-w0.5.mod(21):  Reading nostruct-align/1havA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t2k-w0.5.mod (nostruct-align/1havA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.925852
/projects/compbio/experiments/models.97/pdb/12/12e8L/nostruct-align/12e8L.t2k-w0.5.mod(21):  Reading nostruct-align/12e8L.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2322/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/12/12e8L/nostruct-align/12e8L.t2k-w0.5.mod (nostruct-align/12e8L.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/12/12e8L/nostruct-align/12e8L.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.538910
/projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t2k-w0.5.mod(21):  Reading nostruct-align/1scmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1195/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t2k-w0.5.mod (nostruct-align/1scmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.593885
/projects/compbio/experiments/models.97/pdb/1j/1jj2I/nostruct-align/1jj2I.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20836/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2I/nostruct-align/1jj2I.t2k-w0.5.mod (nostruct-align/1jj2I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2I/nostruct-align/1jj2I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.109875
/projects/compbio/experiments/models.97/pdb/1a/1ay2/nostruct-align/1ay2.t2k-w0.5.mod(21):  Reading nostruct-align/1ay2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-19800/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ay2/nostruct-align/1ay2.t2k-w0.5.mod (nostruct-align/1ay2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ay2/nostruct-align/1ay2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.541855
/projects/compbio/experiments/models.97/pdb/8t/8tfvA/nostruct-align/8tfvA.t2k-w0.5.mod(21):  Reading nostruct-align/8tfvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14356/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8t/8tfvA/nostruct-align/8tfvA.t2k-w0.5.mod (nostruct-align/8tfvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8t/8tfvA/nostruct-align/8tfvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.668884
/projects/compbio/experiments/models.97/pdb/1j/1jj2K/nostruct-align/1jj2K.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2K.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19468/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2K/nostruct-align/1jj2K.t2k-w0.5.mod (nostruct-align/1jj2K.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2K/nostruct-align/1jj2K.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.498854
/projects/compbio/experiments/models.97/pdb/1j/1jj2L/nostruct-align/1jj2L.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2L.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2L/nostruct-align/1jj2L.t2k-w0.5.mod (nostruct-align/1jj2L.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2L/nostruct-align/1jj2L.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.513882
/projects/compbio/experiments/models.97/pdb/1j/1jj2M/nostruct-align/1jj2M.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2M.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2M/nostruct-align/1jj2M.t2k-w0.5.mod (nostruct-align/1jj2M.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2M/nostruct-align/1jj2M.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.955875
/projects/compbio/experiments/models.97/pdb/1j/1jj2N/nostruct-align/1jj2N.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2N.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22930/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2N/nostruct-align/1jj2N.t2k-w0.5.mod (nostruct-align/1jj2N.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2N/nostruct-align/1jj2N.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.095867
/projects/compbio/experiments/models.97/pdb/1j/1jj2O/nostruct-align/1jj2O.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2O.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18445/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2O/nostruct-align/1jj2O.t2k-w0.5.mod (nostruct-align/1jj2O.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2O/nostruct-align/1jj2O.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.573889
/projects/compbio/experiments/models.97/pdb/1d/1dk4A/nostruct-align/1dk4A.t2k-w0.5.mod(21):  Reading nostruct-align/1dk4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1908/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk4A/nostruct-align/1dk4A.t2k-w0.5.mod (nostruct-align/1dk4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dk4A/nostruct-align/1dk4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.740860
/projects/compbio/experiments/models.97/pdb/1j/1jj2P/nostruct-align/1jj2P.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2P.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27311/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2P/nostruct-align/1jj2P.t2k-w0.5.mod (nostruct-align/1jj2P.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2P/nostruct-align/1jj2P.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.539856
/projects/compbio/experiments/models.97/pdb/1j/1jj2Q/nostruct-align/1jj2Q.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2Q.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17549/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2Q/nostruct-align/1jj2Q.t2k-w0.5.mod (nostruct-align/1jj2Q.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2Q/nostruct-align/1jj2Q.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.491865
/projects/compbio/experiments/models.97/pdb/1j/1jj2R/nostruct-align/1jj2R.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2R.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21630/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2R/nostruct-align/1jj2R.t2k-w0.5.mod (nostruct-align/1jj2R.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2R/nostruct-align/1jj2R.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.926857
/projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t2k-w0.5.mod(22):  Reading nostruct-align/1afrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32428/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t2k-w0.5.mod (nostruct-align/1afrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.451864
/projects/compbio/experiments/models.97/pdb/1j/1jwgA/nostruct-align/1jwgA.t2k-w0.5.mod(22):  Reading nostruct-align/1jwgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12338/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jwgA/nostruct-align/1jwgA.t2k-w0.5.mod (nostruct-align/1jwgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jwgA/nostruct-align/1jwgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.468853
/projects/compbio/experiments/models.97/pdb/1j/1jj2S/nostruct-align/1jj2S.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2S.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7138/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2S/nostruct-align/1jj2S.t2k-w0.5.mod (nostruct-align/1jj2S.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2S/nostruct-align/1jj2S.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.360897
/projects/compbio/experiments/models.97/pdb/1j/1jj2T/nostruct-align/1jj2T.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2T.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2T/nostruct-align/1jj2T.t2k-w0.5.mod (nostruct-align/1jj2T.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2T/nostruct-align/1jj2T.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.389889
/projects/compbio/experiments/models.97/pdb/1j/1jj2U/nostruct-align/1jj2U.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2U.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2U/nostruct-align/1jj2U.t2k-w0.5.mod (nostruct-align/1jj2U.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2U/nostruct-align/1jj2U.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.063852
/projects/compbio/experiments/models.97/pdb/1j/1jj2V/nostruct-align/1jj2V.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2V.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2V/nostruct-align/1jj2V.t2k-w0.5.mod (nostruct-align/1jj2V.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2V/nostruct-align/1jj2V.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.806911
/projects/compbio/experiments/models.97/pdb/1j/1jj2W/nostruct-align/1jj2W.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2W.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8188/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2W/nostruct-align/1jj2W.t2k-w0.5.mod (nostruct-align/1jj2W.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2W/nostruct-align/1jj2W.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.053894
/projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t2k-w0.5.mod(21):  Reading nostruct-align/1fbaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-29093/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t2k-w0.5.mod (nostruct-align/1fbaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.298883
/projects/compbio/experiments/models.97/pdb/1j/1jj2X/nostruct-align/1jj2X.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2X.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-16401/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2X/nostruct-align/1jj2X.t2k-w0.5.mod (nostruct-align/1jj2X.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2X/nostruct-align/1jj2X.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.346882
/projects/compbio/experiments/models.97/pdb/1j/1jj2Y/nostruct-align/1jj2Y.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2Y.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2Y/nostruct-align/1jj2Y.t2k-w0.5.mod (nostruct-align/1jj2Y.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2Y/nostruct-align/1jj2Y.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.530869
/projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-w0.5.mod(22):  Reading nostruct-align/1jakA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30788/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-w0.5.mod (nostruct-align/1jakA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jakA/nostruct-align/1jakA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.297882
/projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t2k-w0.5.mod(22):  Reading nostruct-align/1pjr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6094/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t2k-w0.5.mod (nostruct-align/1pjr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.969856
/projects/compbio/experiments/models.97/pdb/1j/1jj2Z/nostruct-align/1jj2Z.t2k-w0.5.mod(22):  Reading nostruct-align/1jj2Z.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13934/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj2Z/nostruct-align/1jj2Z.t2k-w0.5.mod (nostruct-align/1jj2Z.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj2Z/nostruct-align/1jj2Z.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.995888
/projects/compbio/experiments/models.97/pdb/2o/2or1L/nostruct-align/2or1L.t2k-w0.5.mod(21):  Reading nostruct-align/2or1L.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-3220/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2or1L/nostruct-align/2or1L.t2k-w0.5.mod (nostruct-align/2or1L.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2or1L/nostruct-align/2or1L.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.288860
/projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t2k-w0.5.mod(22):  Reading nostruct-align/1tnfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t2k-w0.5.mod (nostruct-align/1tnfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.110870
/projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t2k-w0.5.mod(22):  Reading nostruct-align/1bjaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t2k-w0.5.mod (nostruct-align/1bjaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.056881
/projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t2k-w0.5.mod(21):  Reading nostruct-align/1axh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-3664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t2k-w0.5.mod (nostruct-align/1axh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.344883
/projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t2k-w0.5.mod(21):  Reading nostruct-align/1axj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t2k-w0.5.mod (nostruct-align/1axj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.162893
/projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-w0.5.mod(22):  Reading nostruct-align/1iab.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-w0.5.mod (nostruct-align/1iab.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.281889
/projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-w0.5.mod(21):  Reading nostruct-align/1j71A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-14209/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-w0.5.mod (nostruct-align/1j71A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j71A/nostruct-align/1j71A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.115900
/projects/compbio/experiments/models.97/pdb/1g/1geqA/nostruct-align/1geqA.t2k-w0.5.mod(21):  Reading nostruct-align/1geqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-9187/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1geqA/nostruct-align/1geqA.t2k-w0.5.mod (nostruct-align/1geqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1geqA/nostruct-align/1geqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.266870
/projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t2k-w0.5.mod(22):  Reading nostruct-align/1axn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t2k-w0.5.mod (nostruct-align/1axn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.902861
/projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t2k-w0.5.mod(21):  Reading nostruct-align/1iae.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-9805/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t2k-w0.5.mod (nostruct-align/1iae.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.370853
/projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k-w0.5.mod(21):  Reading nostruct-align/1g2oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12554/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k-w0.5.mod (nostruct-align/1g2oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2oA/nostruct-align/1g2oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.750898
/projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k-w0.5.mod(21):  Reading nostruct-align/1vfrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1750/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k-w0.5.mod (nostruct-align/1vfrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.422861
/projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t2k-w0.5.mod(22):  Reading nostruct-align/1tupA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28917/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t2k-w0.5.mod (nostruct-align/1tupA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.899895
/projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k-w0.5.mod(22):  Reading nostruct-align/1fr3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k-w0.5.mod (nostruct-align/1fr3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fr3A/nostruct-align/1fr3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.588896
/projects/compbio/experiments/models.97/pdb/1i/1iam/nostruct-align/1iam.t2k-w0.5.mod(21):  Reading nostruct-align/1iam.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-3647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iam/nostruct-align/1iam.t2k-w0.5.mod (nostruct-align/1iam.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iam/nostruct-align/1iam.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.756905
/projects/compbio/experiments/models.97/pdb/1d/1dk5A/nostruct-align/1dk5A.t2k-w0.5.mod(21):  Reading nostruct-align/1dk5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-28130/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk5A/nostruct-align/1dk5A.t2k-w0.5.mod (nostruct-align/1dk5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dk5A/nostruct-align/1dk5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.844877
/projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t2k-w0.5.mod(21):  Reading nostruct-align/1az9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-11148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t2k-w0.5.mod (nostruct-align/1az9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.542894
/projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t2k-w0.5.mod(22):  Reading nostruct-align/1zmeC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18644/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t2k-w0.5.mod (nostruct-align/1zmeC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.558865
/projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t2k-w0.5.mod(21):  Reading nostruct-align/1pgtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-20822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t2k-w0.5.mod (nostruct-align/1pgtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.109905
/projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t2k-w0.5.mod(21):  Reading nostruct-align/1a3qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22875/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t2k-w0.5.mod (nostruct-align/1a3qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.409903
/projects/compbio/experiments/models.97/pdb/1p/1pkn/nostruct-align/1pkn.t2k-w0.5.mod(22):  Reading nostruct-align/1pkn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pkn/nostruct-align/1pkn.t2k-w0.5.mod (nostruct-align/1pkn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pkn/nostruct-align/1pkn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.989893
/projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k-w0.5.mod(22):  Reading nostruct-align/1qczA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-731/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k-w0.5.mod (nostruct-align/1qczA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.432890
/projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t2k-w0.5.mod(22):  Reading nostruct-align/1pkp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3958/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t2k-w0.5.mod (nostruct-align/1pkp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.371891
/projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t2k-w0.5.mod(21):  Reading nostruct-align/1aye.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-14424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t2k-w0.5.mod (nostruct-align/1aye.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.158873
/projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t2k-w0.5.mod(21):  Reading nostruct-align/1iba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-6638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t2k-w0.5.mod (nostruct-align/1iba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.965912
/projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t2k-w0.5.mod(22):  Reading nostruct-align/1ayj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-21793/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t2k-w0.5.mod (nostruct-align/1ayj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.842871
/projects/compbio/experiments/models.97/pdb/1d/1dxjA/nostruct-align/1dxjA.t2k-w0.5.mod(21):  Reading nostruct-align/1dxjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-22978/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxjA/nostruct-align/1dxjA.t2k-w0.5.mod (nostruct-align/1dxjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxjA/nostruct-align/1dxjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.079905
/projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-w0.5.mod(22):  Reading nostruct-align/1ayl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4049/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-w0.5.mod (nostruct-align/1ayl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.878857
/projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t2k-w0.5.mod(21):  Reading nostruct-align/1hwtC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-10493/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t2k-w0.5.mod (nostruct-align/1hwtC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.865852
/projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t2k-w0.5.mod(21):  Reading nostruct-align/1etpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-1395/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t2k-w0.5.mod (nostruct-align/1etpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.005865
/projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-w0.5.mod(22):  Reading nostruct-align/1iu8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21568/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-w0.5.mod (nostruct-align/1iu8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iu8A/nostruct-align/1iu8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.033875
/projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t2k-w0.5.mod(21):  Reading nostruct-align/8dfr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-24411/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t2k-w0.5.mod (nostruct-align/8dfr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.157852
/projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-w0.5.mod(21):  Reading nostruct-align/1plc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-w0.5.mod (nostruct-align/1plc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.916889
/projects/compbio/experiments/models.97/pdb/1g/1g9zA/nostruct-align/1g9zA.t2k-w0.5.mod(22):  Reading nostruct-align/1g9zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26373/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g9zA/nostruct-align/1g9zA.t2k-w0.5.mod (nostruct-align/1g9zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g9zA/nostruct-align/1g9zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.798893
/projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t2k-w0.5.mod(21):  Reading nostruct-align/1ayx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29243/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t2k-w0.5.mod (nostruct-align/1ayx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.113886
/projects/compbio/experiments/models.97/pdb/1d/1dixA/nostruct-align/1dixA.t2k-w0.5.mod(21):  Reading nostruct-align/1dixA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-16183/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dixA/nostruct-align/1dixA.t2k-w0.5.mod (nostruct-align/1dixA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dixA/nostruct-align/1dixA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.980869
/projects/compbio/experiments/models.97/pdb/1b/1bz4A/nostruct-align/1bz4A.t2k-w0.5.mod(21):  Reading nostruct-align/1bz4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30613/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bz4A/nostruct-align/1bz4A.t2k-w0.5.mod (nostruct-align/1bz4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bz4A/nostruct-align/1bz4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.481873
/projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t2k-w0.5.mod(21):  Reading nostruct-align/1bxvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26108/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t2k-w0.5.mod (nostruct-align/1bxvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.990887
/projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t2k-w0.5.mod(21):  Reading nostruct-align/1wjbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19863/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t2k-w0.5.mod (nostruct-align/1wjbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.183861
/projects/compbio/experiments/models.97/pdb/1j/1jwiA/nostruct-align/1jwiA.t2k-w0.5.mod(22):  Reading nostruct-align/1jwiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jwiA/nostruct-align/1jwiA.t2k-w0.5.mod (nostruct-align/1jwiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jwiA/nostruct-align/1jwiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.902908
/projects/compbio/experiments/models.97/pdb/1j/1jwiB/nostruct-align/1jwiB.t2k-w0.5.mod(22):  Reading nostruct-align/1jwiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9457/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jwiB/nostruct-align/1jwiB.t2k-w0.5.mod (nostruct-align/1jwiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jwiB/nostruct-align/1jwiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.263855
/projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k-w0.5.mod(22):  Reading nostruct-align/1gteA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k-w0.5.mod (nostruct-align/1gteA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gteA/nostruct-align/1gteA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.558882
/projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t2k-w0.5.mod(22):  Reading nostruct-align/1bbzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t2k-w0.5.mod (nostruct-align/1bbzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.490898
/projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t2k-w0.5.mod(22):  Reading nostruct-align/1b16A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32140/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t2k-w0.5.mod (nostruct-align/1b16A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.283857
/projects/compbio/experiments/models.97/pdb/1p/1plp/nostruct-align/1plp.t2k-w0.5.mod(21):  Reading nostruct-align/1plp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30051/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plp/nostruct-align/1plp.t2k-w0.5.mod (nostruct-align/1plp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1plp/nostruct-align/1plp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.181892
/projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t2k-w0.5.mod(22):  Reading nostruct-align/1plq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t2k-w0.5.mod (nostruct-align/1plq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.063854
/projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4520/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t2k-w0.5.mod (nostruct-align/1dqaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.195890
/projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t2k-w0.5.mod(21):  Reading nostruct-align/1plr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t2k-w0.5.mod (nostruct-align/1plr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.020857
/projects/compbio/experiments/models.97/pdb/1d/1dqaC/nostruct-align/1dqaC.t2k-w0.5.mod(21):  Reading nostruct-align/1dqaC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11672/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqaC/nostruct-align/1dqaC.t2k-w0.5.mod (nostruct-align/1dqaC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqaC/nostruct-align/1dqaC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.814896
/projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t2k-w0.5.mod(21):  Reading nostruct-align/1pls.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t2k-w0.5.mod (nostruct-align/1pls.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.306911
/projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t2k-w0.5.mod(21):  Reading nostruct-align/1louA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-14664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t2k-w0.5.mod (nostruct-align/1louA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.148857
/projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t2k-w0.5.mod(21):  Reading nostruct-align/1azh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t2k-w0.5.mod (nostruct-align/1azh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.349892
/projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t2k-w0.5.mod(21):  Reading nostruct-align/1ica.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-11808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t2k-w0.5.mod (nostruct-align/1ica.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.943853
/projects/compbio/experiments/models.97/pdb/1k/1kzyC/nostruct-align/1kzyC.t2k-w0.5.mod(22):  Reading nostruct-align/1kzyC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22472/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kzyC/nostruct-align/1kzyC.t2k-w0.5.mod (nostruct-align/1kzyC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kzyC/nostruct-align/1kzyC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.321886
/projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t2k-w0.5.mod(21):  Reading nostruct-align/3pcnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12110/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t2k-w0.5.mod (nostruct-align/3pcnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.718906
/projects/compbio/experiments/models.97/pdb/1g/1gg1A/nostruct-align/1gg1A.t2k-w0.5.mod(22):  Reading nostruct-align/1gg1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-12307/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg1A/nostruct-align/1gg1A.t2k-w0.5.mod (nostruct-align/1gg1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gg1A/nostruct-align/1gg1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.898903
/projects/compbio/experiments/models.97/pdb/1g/1gesA/nostruct-align/1gesA.t2k-w0.5.mod(21):  Reading nostruct-align/1gesA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24675/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gesA/nostruct-align/1gesA.t2k-w0.5.mod (nostruct-align/1gesA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gesA/nostruct-align/1gesA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.376865
/projects/compbio/experiments/models.97/pdb/1c/1c3gA/nostruct-align/1c3gA.t2k-w0.5.mod(22):  Reading nostruct-align/1c3gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3gA/nostruct-align/1c3gA.t2k-w0.5.mod (nostruct-align/1c3gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3gA/nostruct-align/1c3gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.417871
/projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t2k-w0.5.mod(21):  Reading nostruct-align/1augA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-7344/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t2k-w0.5.mod (nostruct-align/1augA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.818882
/projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17563/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k-w0.5.mod (nostruct-align/1g2qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2qA/nostruct-align/1g2qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.486855
/projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-w0.5.mod(22):  Reading nostruct-align/1azo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-w0.5.mod (nostruct-align/1azo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.514887
/projects/compbio/experiments/models.97/pdb/1d/1dboA/nostruct-align/1dboA.t2k-w0.5.mod(21):  Reading nostruct-align/1dboA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-31335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dboA/nostruct-align/1dboA.t2k-w0.5.mod (nostruct-align/1dboA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dboA/nostruct-align/1dboA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.105904
/projects/compbio/experiments/models.97/pdb/1h/1hc7A/nostruct-align/1hc7A.t2k-w0.5.mod(21):  Reading nostruct-align/1hc7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-27251/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hc7A/nostruct-align/1hc7A.t2k-w0.5.mod (nostruct-align/1hc7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hc7A/nostruct-align/1hc7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.560875
/projects/compbio/experiments/models.97/pdb/5h/5hvpA/nostruct-align/5hvpA.t2k-w0.5.mod(21):  Reading nostruct-align/5hvpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-9821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5h/5hvpA/nostruct-align/5hvpA.t2k-w0.5.mod (nostruct-align/5hvpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5h/5hvpA/nostruct-align/5hvpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.516859
/projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t2k-w0.5.mod(21):  Reading nostruct-align/1pmc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-24903/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t2k-w0.5.mod (nostruct-align/1pmc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.409895
/projects/compbio/experiments/models.97/pdb/1a/1azu/nostruct-align/1azu.t2k-w0.5.mod(21):  Reading nostruct-align/1azu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1azu/nostruct-align/1azu.t2k-w0.5.mod (nostruct-align/1azu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1azu/nostruct-align/1azu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.029884
/projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t2k-w0.5.mod(21):  Reading nostruct-align/1pmd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-2291/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t2k-w0.5.mod (nostruct-align/1pmd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.985874
/projects/compbio/experiments/models.97/pdb/1p/1pme/nostruct-align/1pme.t2k-w0.5.mod(22):  Reading nostruct-align/1pme.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-15859/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pme/nostruct-align/1pme.t2k-w0.5.mod (nostruct-align/1pme.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pme/nostruct-align/1pme.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.976894
/projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t2k-w0.5.mod(21):  Reading nostruct-align/1ilr1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-8490/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t2k-w0.5.mod (nostruct-align/1ilr1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.851887
/projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-w0.5.mod(22):  Reading nostruct-align/1pmi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20958/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-w0.5.mod (nostruct-align/1pmi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.297897
/projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t2k-w0.5.mod(21):  Reading nostruct-align/1bxwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-15521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t2k-w0.5.mod (nostruct-align/1bxwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.404892
/projects/compbio/experiments/models.97/pdb/1w/1wjcA/nostruct-align/1wjcA.t2k-w0.5.mod(21):  Reading nostruct-align/1wjcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-29936/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wjcA/nostruct-align/1wjcA.t2k-w0.5.mod (nostruct-align/1wjcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wjcA/nostruct-align/1wjcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.332859
/projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t2k-w0.5.mod(21):  Reading nostruct-align/1dqbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25326/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t2k-w0.5.mod (nostruct-align/1dqbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.814909
/projects/compbio/experiments/models.97/pdb/1p/1pmt/nostruct-align/1pmt.t2k-w0.5.mod(22):  Reading nostruct-align/1pmt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmt/nostruct-align/1pmt.t2k-w0.5.mod (nostruct-align/1pmt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmt/nostruct-align/1pmt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.590879
/projects/compbio/experiments/models.97/pdb/1x/1xo1A/nostruct-align/1xo1A.t2k-w0.5.mod(21):  Reading nostruct-align/1xo1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12558/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xo1A/nostruct-align/1xo1A.t2k-w0.5.mod (nostruct-align/1xo1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xo1A/nostruct-align/1xo1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.235891
/projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t2k-w0.5.mod(21):  Reading nostruct-align/1b7bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20364/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t2k-w0.5.mod (nostruct-align/1b7bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.893887
/projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t2k-w0.5.mod(21):  Reading nostruct-align/1pmy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4831/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t2k-w0.5.mod (nostruct-align/1pmy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.911880
/projects/compbio/experiments/models.97/pdb/1g/1g40A/nostruct-align/1g40A.t2k-w0.5.mod(21):  Reading nostruct-align/1g40A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-29413/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g40A/nostruct-align/1g40A.t2k-w0.5.mod (nostruct-align/1g40A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g40A/nostruct-align/1g40A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.376860
/projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-w0.5.mod (nostruct-align/1g2rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2rA/nostruct-align/1g2rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.683851
/projects/compbio/experiments/models.97/pdb/1e/1ev0A/nostruct-align/1ev0A.t2k-w0.5.mod(21):  Reading nostruct-align/1ev0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev0A/nostruct-align/1ev0A.t2k-w0.5.mod (nostruct-align/1ev0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ev0A/nostruct-align/1ev0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.616882
/projects/compbio/experiments/models.97/pdb/1f/1fpxA/nostruct-align/1fpxA.t2k-w0.5.mod(22):  Reading nostruct-align/1fpxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9468/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpxA/nostruct-align/1fpxA.t2k-w0.5.mod (nostruct-align/1fpxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fpxA/nostruct-align/1fpxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.865858
/projects/compbio/experiments/models.97/pdb/1j/1jpaA/nostruct-align/1jpaA.t2k-w0.5.mod(22):  Reading nostruct-align/1jpaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpaA/nostruct-align/1jpaA.t2k-w0.5.mod (nostruct-align/1jpaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jpaA/nostruct-align/1jpaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.409872
/projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t2k-w0.5.mod(21):  Reading nostruct-align/1idk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-19808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t2k-w0.5.mod (nostruct-align/1idk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.389851
/projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t2k-w0.5.mod(21):  Reading nostruct-align/1idm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-6979/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t2k-w0.5.mod (nostruct-align/1idm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.890869
/projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t2k-w0.5.mod(22):  Reading nostruct-align/1pne.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11144/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t2k-w0.5.mod (nostruct-align/1pne.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.785887
/projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t2k-w0.5.mod(22):  Reading nostruct-align/1ido.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8217/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t2k-w0.5.mod (nostruct-align/1ido.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.151886
/projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-w0.5.mod(22):  Reading nostruct-align/1dk8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-834/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-w0.5.mod (nostruct-align/1dk8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dk8A/nostruct-align/1dk8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.191872
/projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t2k-w0.5.mod(21):  Reading nostruct-align/1pnh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16363/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t2k-w0.5.mod (nostruct-align/1pnh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.306860
/projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t2k-w0.5.mod(21):  Reading nostruct-align/1bxxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7207/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t2k-w0.5.mod (nostruct-align/1bxxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.614862
/projects/compbio/experiments/models.97/pdb/1d/1dqcA/nostruct-align/1dqcA.t2k-w0.5.mod(21):  Reading nostruct-align/1dqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqcA/nostruct-align/1dqcA.t2k-w0.5.mod (nostruct-align/1dqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqcA/nostruct-align/1dqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.588863
/projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t2k-w0.5.mod(21):  Reading nostruct-align/6mhtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4954/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t2k-w0.5.mod (nostruct-align/6mhtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.511875
/projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t2k-w0.5.mod(21):  Reading nostruct-align/1qkfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13653/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t2k-w0.5.mod (nostruct-align/1qkfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.925865
/projects/compbio/experiments/models.97/pdb/1f/1fioA/nostruct-align/1fioA.t2k-w0.5.mod(21):  Reading nostruct-align/1fioA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-22099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fioA/nostruct-align/1fioA.t2k-w0.5.mod (nostruct-align/1fioA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fioA/nostruct-align/1fioA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.751877
/projects/compbio/experiments/models.97/pdb/1j/1jj7A/nostruct-align/1jj7A.t2k-w0.5.mod(21):  Reading nostruct-align/1jj7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jj7A/nostruct-align/1jj7A.t2k-w0.5.mod (nostruct-align/1jj7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jj7A/nostruct-align/1jj7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.260887
/projects/compbio/experiments/models.97/pdb/1j/1j75A/nostruct-align/1j75A.t2k-w0.5.mod(22):  Reading nostruct-align/1j75A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12309/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j75A/nostruct-align/1j75A.t2k-w0.5.mod (nostruct-align/1j75A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j75A/nostruct-align/1j75A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.566885
/projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t2k-w0.5.mod(21):  Reading nostruct-align/1auiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-504/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t2k-w0.5.mod (nostruct-align/1auiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.051865
/projects/compbio/experiments/models.97/pdb/1g/1g41A/nostruct-align/1g41A.t2k-w0.5.mod(22):  Reading nostruct-align/1g41A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-30700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g41A/nostruct-align/1g41A.t2k-w0.5.mod (nostruct-align/1g41A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g41A/nostruct-align/1g41A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.130882
/projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t2k-w0.5.mod(21):  Reading nostruct-align/1auiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-1754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t2k-w0.5.mod (nostruct-align/1auiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.923904
/projects/compbio/experiments/models.97/pdb/1d/1dbqA/nostruct-align/1dbqA.t2k-w0.5.mod(21):  Reading nostruct-align/1dbqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-31096/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbqA/nostruct-align/1dbqA.t2k-w0.5.mod (nostruct-align/1dbqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbqA/nostruct-align/1dbqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.602875
/projects/compbio/experiments/models.97/pdb/1h/1hc9A/nostruct-align/1hc9A.t2k-w0.5.mod(22):  Reading nostruct-align/1hc9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30045/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hc9A/nostruct-align/1hc9A.t2k-w0.5.mod (nostruct-align/1hc9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hc9A/nostruct-align/1hc9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.279879
/projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t2k-w0.5.mod(21):  Reading nostruct-align/1poa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t2k-w0.5.mod (nostruct-align/1poa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.977898
/projects/compbio/experiments/models.97/pdb/1f/1fr7A/nostruct-align/1fr7A.t2k-w0.5.mod(21):  Reading nostruct-align/1fr7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr7A/nostruct-align/1fr7A.t2k-w0.5.mod (nostruct-align/1fr7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fr7A/nostruct-align/1fr7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.612860
/projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t2k-w0.5.mod(21):  Reading nostruct-align/1poc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t2k-w0.5.mod (nostruct-align/1poc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.469910
/projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t2k-w0.5.mod(21):  Reading nostruct-align/1poh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-6811/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t2k-w0.5.mod (nostruct-align/1poh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.204897
/projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t2k-w0.5.mod(22):  Reading nostruct-align/1bxyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7032/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t2k-w0.5.mod (nostruct-align/1bxyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.861904
/projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k-w0.5.mod(22):  Reading nostruct-align/1afwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k-w0.5.mod (nostruct-align/1afwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.829887
/projects/compbio/experiments/models.97/pdb/1i/1iejA/nostruct-align/1iejA.t2k-w0.5.mod(21):  Reading nostruct-align/1iejA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-20358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iejA/nostruct-align/1iejA.t2k-w0.5.mod (nostruct-align/1iejA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iejA/nostruct-align/1iejA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.306858
/projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-w0.5.mod(22):  Reading nostruct-align/1pot.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27790/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-w0.5.mod (nostruct-align/1pot.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.234894
/projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t2k-w0.5.mod(21):  Reading nostruct-align/1pou.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-12886/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t2k-w0.5.mod (nostruct-align/1pou.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.740866
/projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t2k-w0.5.mod(21):  Reading nostruct-align/1b7dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-15089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t2k-w0.5.mod (nostruct-align/1b7dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.082884
/projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t2k-w0.5.mod(22):  Reading nostruct-align/1fipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t2k-w0.5.mod (nostruct-align/1fipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.130869
/projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t2k-w0.5.mod(22):  Reading nostruct-align/1ifa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16930/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t2k-w0.5.mod (nostruct-align/1ifa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.731895
/projects/compbio/experiments/models.97/pdb/1h/1hwxA/nostruct-align/1hwxA.t2k-w0.5.mod(21):  Reading nostruct-align/1hwxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-5519/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hwxA/nostruct-align/1hwxA.t2k-w0.5.mod (nostruct-align/1hwxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hwxA/nostruct-align/1hwxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.746872
/projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-w0.5.mod(22):  Reading nostruct-align/1ifc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20776/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-w0.5.mod (nostruct-align/1ifc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.169909
/projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t2k-w0.5.mod(21):  Reading nostruct-align/1c3jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-20530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t2k-w0.5.mod (nostruct-align/1c3jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.830906
/projects/compbio/experiments/models.97/pdb/1g/1gg4A/nostruct-align/1gg4A.t2k-w0.5.mod(22):  Reading nostruct-align/1gg4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-27983/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg4A/nostruct-align/1gg4A.t2k-w0.5.mod (nostruct-align/1gg4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gg4A/nostruct-align/1gg4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.336899
/projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t2k-w0.5.mod(21):  Reading nostruct-align/1ifi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15264/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t2k-w0.5.mod (nostruct-align/1ifi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.407856
/projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t2k-w0.5.mod(21):  Reading nostruct-align/1qrqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-10357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t2k-w0.5.mod (nostruct-align/1qrqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.637857
/projects/compbio/experiments/models.97/pdb/1e/1ev2E/nostruct-align/1ev2E.t2k-w0.5.mod(21):  Reading nostruct-align/1ev2E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-5817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev2E/nostruct-align/1ev2E.t2k-w0.5.mod (nostruct-align/1ev2E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ev2E/nostruct-align/1ev2E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.441891
/projects/compbio/experiments/models.97/pdb/1f/1fpzA/nostruct-align/1fpzA.t2k-w0.5.mod(22):  Reading nostruct-align/1fpzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fpzA/nostruct-align/1fpzA.t2k-w0.5.mod (nostruct-align/1fpzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fpzA/nostruct-align/1fpzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.244865
/projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t2k-w0.5.mod(21):  Reading nostruct-align/1ifj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t2k-w0.5.mod (nostruct-align/1ifj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.407856
/projects/compbio/experiments/models.97/pdb/1p/1ppa/nostruct-align/1ppa.t2k-w0.5.mod(21):  Reading nostruct-align/1ppa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-17440/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppa/nostruct-align/1ppa.t2k-w0.5.mod (nostruct-align/1ppa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ppa/nostruct-align/1ppa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.988869
/projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t2k-w0.5.mod(21):  Reading nostruct-align/1co4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t2k-w0.5.mod (nostruct-align/1co4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.857878
/projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t2k-w0.5.mod(21):  Reading nostruct-align/1ifl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t2k-w0.5.mod (nostruct-align/1ifl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.751873
/projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t2k-w0.5.mod(21):  Reading nostruct-align/1ifm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t2k-w0.5.mod (nostruct-align/1ifm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.649897
/projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t2k-w0.5.mod(21):  Reading nostruct-align/1ifp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-15281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t2k-w0.5.mod (nostruct-align/1ifp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.957870
/projects/compbio/experiments/models.97/pdb/1d/1d6zA/nostruct-align/1d6zA.t2k-w0.5.mod(22):  Reading nostruct-align/1d6zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2771/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d6zA/nostruct-align/1d6zA.t2k-w0.5.mod (nostruct-align/1d6zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d6zA/nostruct-align/1d6zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.660856
/projects/compbio/experiments/models.97/pdb/1i/1ift/nostruct-align/1ift.t2k-w0.5.mod(21):  Reading nostruct-align/1ift.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30730/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ift/nostruct-align/1ift.t2k-w0.5.mod (nostruct-align/1ift.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ift/nostruct-align/1ift.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.190891
/projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t2k-w0.5.mod(22):  Reading nostruct-align/1ppn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t2k-w0.5.mod (nostruct-align/1ppn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.996876
/projects/compbio/experiments/models.97/pdb/1p/1ppo/nostruct-align/1ppo.t2k-w0.5.mod(21):  Reading nostruct-align/1ppo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-26074/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppo/nostruct-align/1ppo.t2k-w0.5.mod (nostruct-align/1ppo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ppo/nostruct-align/1ppo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.677877
/projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13005/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-w0.5.mod (nostruct-align/1dqeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqeA/nostruct-align/1dqeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.499882
/projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t2k-w0.5.mod(22):  Reading nostruct-align/1ppt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14845/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t2k-w0.5.mod (nostruct-align/1ppt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.078911
/projects/compbio/experiments/models.97/pdb/1i/1i9sA/nostruct-align/1i9sA.t2k-w0.5.mod(22):  Reading nostruct-align/1i9sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3070/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9sA/nostruct-align/1i9sA.t2k-w0.5.mod (nostruct-align/1i9sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i9sA/nostruct-align/1i9sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.535904
/projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t2k-w0.5.mod(21):  Reading nostruct-align/1b7eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14471/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t2k-w0.5.mod (nostruct-align/1b7eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.288870
/projects/compbio/experiments/models.97/pdb/1f/1fiqB/nostruct-align/1fiqB.t2k-w0.5.mod(21):  Reading nostruct-align/1fiqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-27926/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiqB/nostruct-align/1fiqB.t2k-w0.5.mod (nostruct-align/1fiqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fiqB/nostruct-align/1fiqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.015907
/projects/compbio/experiments/models.97/pdb/1f/1fiqC/nostruct-align/1fiqC.t2k-w0.5.mod(21):  Reading nostruct-align/1fiqC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30718/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiqC/nostruct-align/1fiqC.t2k-w0.5.mod (nostruct-align/1fiqC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fiqC/nostruct-align/1fiqC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.188881
/projects/compbio/experiments/models.97/pdb/1h/1hy7A/nostruct-align/1hy7A.t2k-w0.5.mod(22):  Reading nostruct-align/1hy7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26501/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy7A/nostruct-align/1hy7A.t2k-w0.5.mod (nostruct-align/1hy7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hy7A/nostruct-align/1hy7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.816881
/projects/compbio/experiments/models.97/pdb/1h/1hwyA/nostruct-align/1hwyA.t2k-w0.5.mod(21):  Reading nostruct-align/1hwyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-8893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hwyA/nostruct-align/1hwyA.t2k-w0.5.mod (nostruct-align/1hwyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hwyA/nostruct-align/1hwyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.553879
/projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-w0.5.mod(22):  Reading nostruct-align/1j77A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-w0.5.mod (nostruct-align/1j77A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j77A/nostruct-align/1j77A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.094902
/projects/compbio/experiments/models.97/pdb/1g/1gewA/nostruct-align/1gewA.t2k-w0.5.mod(21):  Reading nostruct-align/1gewA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-7954/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gewA/nostruct-align/1gewA.t2k-w0.5.mod (nostruct-align/1gewA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gewA/nostruct-align/1gewA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.590906
/projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t2k-w0.5.mod(21):  Reading nostruct-align/1igd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-29555/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t2k-w0.5.mod (nostruct-align/1igd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.112877
/projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t2k-w0.5.mod(21):  Reading nostruct-align/2bvwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-15764/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t2k-w0.5.mod (nostruct-align/2bvwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.218864
/projects/compbio/experiments/models.97/pdb/1s/1sctB/nostruct-align/1sctB.t2k-w0.5.mod(21):  Reading nostruct-align/1sctB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29843/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sctB/nostruct-align/1sctB.t2k-w0.5.mod (nostruct-align/1sctB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sctB/nostruct-align/1sctB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.087872
/projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t2k-w0.5.mod(22):  Reading nostruct-align/1qrrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6780/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t2k-w0.5.mod (nostruct-align/1qrrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.089863
/projects/compbio/experiments/models.97/pdb/1f/1fr9A/nostruct-align/1fr9A.t2k-w0.5.mod(21):  Reading nostruct-align/1fr9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1533/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fr9A/nostruct-align/1fr9A.t2k-w0.5.mod (nostruct-align/1fr9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fr9A/nostruct-align/1fr9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.295895
/projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t2k-w0.5.mod(21):  Reading nostruct-align/1igl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t2k-w0.5.mod (nostruct-align/1igl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.077873
/projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t2k-w0.5.mod(22):  Reading nostruct-align/2vsgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25404/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t2k-w0.5.mod (nostruct-align/2vsgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.322906
/projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t2k-w0.5.mod(21):  Reading nostruct-align/1om2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5830/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t2k-w0.5.mod (nostruct-align/1om2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.230873
/projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-w0.5.mod(22):  Reading nostruct-align/2spcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29556/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-w0.5.mod (nostruct-align/2spcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.989893
/projects/compbio/experiments/models.97/pdb/1h/1h6dA/nostruct-align/1h6dA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6dA/nostruct-align/1h6dA.t2k-w0.5.mod (nostruct-align/1h6dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6dA/nostruct-align/1h6dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.300865
/projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t2k-w0.5.mod(21):  Reading nostruct-align/2emo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-11980/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t2k-w0.5.mod (nostruct-align/2emo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.445864
/projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t2k-w0.5.mod(21):  Reading nostruct-align/1igs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-30409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t2k-w0.5.mod (nostruct-align/1igs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.988884
/projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t2k-w0.5.mod(21):  Reading nostruct-align/1rvaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t2k-w0.5.mod (nostruct-align/1rvaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.401909
/projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k-w0.5.mod(22):  Reading nostruct-align/1in4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k-w0.5.mod (nostruct-align/1in4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1in4A/nostruct-align/1in4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.058861
/projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t2k-w0.5.mod(21):  Reading nostruct-align/1b7fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-26467/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t2k-w0.5.mod (nostruct-align/1b7fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.634853
/projects/compbio/experiments/models.97/pdb/1j/1j78A/nostruct-align/1j78A.t2k-w0.5.mod(22):  Reading nostruct-align/1j78A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15813/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j78A/nostruct-align/1j78A.t2k-w0.5.mod (nostruct-align/1j78A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j78A/nostruct-align/1j78A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.217886
/projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t2k-w0.5.mod(21):  Reading nostruct-align/3pfk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-2548/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t2k-w0.5.mod (nostruct-align/3pfk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.297899
/projects/compbio/experiments/models.97/pdb/1g/1gg6B/nostruct-align/1gg6B.t2k-w0.5.mod(21):  Reading nostruct-align/1gg6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-413/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg6B/nostruct-align/1gg6B.t2k-w0.5.mod (nostruct-align/1gg6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gg6B/nostruct-align/1gg6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.549864
/projects/compbio/experiments/models.97/pdb/1k/1keaA/nostruct-align/1keaA.t2k-w0.5.mod(22):  Reading nostruct-align/1keaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-29012/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1keaA/nostruct-align/1keaA.t2k-w0.5.mod (nostruct-align/1keaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1keaA/nostruct-align/1keaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.828852
/projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-w0.5.mod(22):  Reading nostruct-align/1vfyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9477/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-w0.5.mod (nostruct-align/1vfyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.009863
/projects/compbio/experiments/models.97/pdb/1g/1gg6C/nostruct-align/1gg6C.t2k-w0.5.mod(21):  Reading nostruct-align/1gg6C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-13538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gg6C/nostruct-align/1gg6C.t2k-w0.5.mod (nostruct-align/1gg6C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gg6C/nostruct-align/1gg6C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.108873
/projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t2k-w0.5.mod(21):  Reading nostruct-align/1dbtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-15589/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t2k-w0.5.mod (nostruct-align/1dbtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.200901
/projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t2k-w0.5.mod(22):  Reading nostruct-align/2end.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t2k-w0.5.mod (nostruct-align/2end.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.919855
/projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t2k-w0.5.mod(21):  Reading nostruct-align/1scuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t2k-w0.5.mod (nostruct-align/1scuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.766886
/projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-w0.5.mod(22):  Reading nostruct-align/1bs0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-w0.5.mod (nostruct-align/1bs0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.417887
/projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t2k-w0.5.mod(21):  Reading nostruct-align/3c2c.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30904/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t2k-w0.5.mod (nostruct-align/3c2c.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.131884
/projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-w0.5.mod(22):  Reading nostruct-align/2eng.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-w0.5.mod (nostruct-align/2eng.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.973858
/projects/compbio/experiments/models.97/pdb/1c/1cmxA/nostruct-align/1cmxA.t2k-w0.5.mod(21):  Reading nostruct-align/1cmxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18563/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmxA/nostruct-align/1cmxA.t2k-w0.5.mod (nostruct-align/1cmxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmxA/nostruct-align/1cmxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.801870
/projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-w0.5.mod(21):  Reading nostruct-align/1co6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13088/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-w0.5.mod (nostruct-align/1co6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.815859
/projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t2k-w0.5.mod(22):  Reading nostruct-align/1ihp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t2k-w0.5.mod (nostruct-align/1ihp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.974854
/projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t2k-w0.5.mod(21):  Reading nostruct-align/1efcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3245/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t2k-w0.5.mod (nostruct-align/1efcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.749895
/projects/compbio/experiments/models.97/pdb/1e/1e3aA/nostruct-align/1e3aA.t2k-w0.5.mod(21):  Reading nostruct-align/1e3aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3aA/nostruct-align/1e3aA.t2k-w0.5.mod (nostruct-align/1e3aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3aA/nostruct-align/1e3aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.185883
/projects/compbio/experiments/models.97/pdb/1e/1e3aB/nostruct-align/1e3aB.t2k-w0.5.mod(21):  Reading nostruct-align/1e3aB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3aB/nostruct-align/1e3aB.t2k-w0.5.mod (nostruct-align/1e3aB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3aB/nostruct-align/1e3aB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.623875
/projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t2k-w0.5.mod(21):  Reading nostruct-align/1prn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t2k-w0.5.mod (nostruct-align/1prn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.755907
/projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ku3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-w0.5.mod (nostruct-align/1ku3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ku3A/nostruct-align/1ku3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.326866
/projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32376/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-w0.5.mod (nostruct-align/1dqgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqgA/nostruct-align/1dqgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.619852
/projects/compbio/experiments/models.97/pdb/1p/1prr/nostruct-align/1prr.t2k-w0.5.mod(21):  Reading nostruct-align/1prr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2773/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prr/nostruct-align/1prr.t2k-w0.5.mod (nostruct-align/1prr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prr/nostruct-align/1prr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.196857
/projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t2k-w0.5.mod(21):  Reading nostruct-align/1prs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9415/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t2k-w0.5.mod (nostruct-align/1prs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.196857
/projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t2k-w0.5.mod(21):  Reading nostruct-align/1pru.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-18225/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t2k-w0.5.mod (nostruct-align/1pru.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.234859
/projects/compbio/experiments/models.97/pdb/1h/1hy9A/nostruct-align/1hy9A.t2k-w0.5.mod(21):  Reading nostruct-align/1hy9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-22543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hy9A/nostruct-align/1hy9A.t2k-w0.5.mod (nostruct-align/1hy9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hy9A/nostruct-align/1hy9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.985863
/projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-w0.5.mod(22):  Reading nostruct-align/1j79A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2972/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-w0.5.mod (nostruct-align/1j79A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j79A/nostruct-align/1j79A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.593876
/projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t2k-w0.5.mod(21):  Reading nostruct-align/3pgk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-29708/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t2k-w0.5.mod (nostruct-align/3pgk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.202877
/projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t2k-w0.5.mod(22):  Reading nostruct-align/1c3mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23257/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t2k-w0.5.mod (nostruct-align/1c3mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.106909
/projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t2k-w0.5.mod(21):  Reading nostruct-align/3pgm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-17764/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t2k-w0.5.mod (nostruct-align/3pgm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.688879
/projects/compbio/experiments/models.97/pdb/1d/1dd3A/nostruct-align/1dd3A.t2k-w0.5.mod(22):  Reading nostruct-align/1dd3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16966/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd3A/nostruct-align/1dd3A.t2k-w0.5.mod (nostruct-align/1dd3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dd3A/nostruct-align/1dd3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.023857
/projects/compbio/experiments/models.97/pdb/1d/1dbuA/nostruct-align/1dbuA.t2k-w0.5.mod(22):  Reading nostruct-align/1dbuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbuA/nostruct-align/1dbuA.t2k-w0.5.mod (nostruct-align/1dbuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbuA/nostruct-align/1dbuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.941900
/projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t2k-w0.5.mod(21):  Reading nostruct-align/1bqsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t2k-w0.5.mod (nostruct-align/1bqsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.927862
/projects/compbio/experiments/models.97/pdb/1d/1dd3C/nostruct-align/1dd3C.t2k-w0.5.mod(22):  Reading nostruct-align/1dd3C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32205/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd3C/nostruct-align/1dd3C.t2k-w0.5.mod (nostruct-align/1dd3C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dd3C/nostruct-align/1dd3C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.854906
/projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t2k-w0.5.mod(21):  Reading nostruct-align/1ba1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-21329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t2k-w0.5.mod (nostruct-align/1ba1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.101892
/projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t2k-w0.5.mod(21):  Reading nostruct-align/1ba4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-27609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t2k-w0.5.mod (nostruct-align/1ba4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.317900
/projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t2k-w0.5.mod(21):  Reading nostruct-align/1ba5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25600/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t2k-w0.5.mod (nostruct-align/1ba5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.291874
/projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t2k-w0.5.mod(21):  Reading nostruct-align/1pse.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-635/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t2k-w0.5.mod (nostruct-align/1pse.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.697878
/projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t2k-w0.5.mod(21):  Reading nostruct-align/1b7gO.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-9180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t2k-w0.5.mod (nostruct-align/1b7gO.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.616869
/projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t2k-w0.5.mod(22):  Reading nostruct-align/1ba6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16520/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t2k-w0.5.mod (nostruct-align/1ba6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.317900
/projects/compbio/experiments/models.97/pdb/1k/1k9jA/nostruct-align/1k9jA.t2k-w0.5.mod(22):  Reading nostruct-align/1k9jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-16562/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k9jA/nostruct-align/1k9jA.t2k-w0.5.mod (nostruct-align/1k9jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k9jA/nostruct-align/1k9jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.014875
/projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-7166/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-w0.5.mod (nostruct-align/1h6fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6fA/nostruct-align/1h6fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.373865
/projects/compbio/experiments/models.97/pdb/1a/1a3yA/nostruct-align/1a3yA.t2k-w0.5.mod(21):  Reading nostruct-align/1a3yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-11151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a3yA/nostruct-align/1a3yA.t2k-w0.5.mod (nostruct-align/1a3yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a3yA/nostruct-align/1a3yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.285902
/projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t2k-w0.5.mod(21):  Reading nostruct-align/1psm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22707/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t2k-w0.5.mod (nostruct-align/1psm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.962877
/projects/compbio/experiments/models.97/pdb/1j/1jatA/nostruct-align/1jatA.t2k-w0.5.mod(22):  Reading nostruct-align/1jatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jatA/nostruct-align/1jatA.t2k-w0.5.mod (nostruct-align/1jatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jatA/nostruct-align/1jatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.193869
/projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t2k-w0.5.mod(21):  Reading nostruct-align/2tbd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-18865/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t2k-w0.5.mod (nostruct-align/2tbd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.483889
/projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-w0.5.mod(21):  Reading nostruct-align/1jatB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-26365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-w0.5.mod (nostruct-align/1jatB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jatB/nostruct-align/1jatB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.228909
/projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t2k-w0.5.mod(21):  Reading nostruct-align/1sriA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-20605/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t2k-w0.5.mod (nostruct-align/1sriA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.460888
/projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-w0.5.mod(22):  Reading nostruct-align/2bopA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-15209/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-w0.5.mod (nostruct-align/2bopA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.112864
/projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k-w0.5.mod(21):  Reading nostruct-align/1qkkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5785/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k-w0.5.mod (nostruct-align/1qkkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qkkA/nostruct-align/1qkkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.688896
/projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t2k-w0.5.mod(22):  Reading nostruct-align/1efdN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8348/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t2k-w0.5.mod (nostruct-align/1efdN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.313887
/projects/compbio/experiments/models.97/pdb/1d/1dxrC/nostruct-align/1dxrC.t2k-w0.5.mod(22):  Reading nostruct-align/1dxrC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrC/nostruct-align/1dxrC.t2k-w0.5.mod (nostruct-align/1dxrC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxrC/nostruct-align/1dxrC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.920897
/projects/compbio/experiments/models.97/pdb/1f/1f80D/nostruct-align/1f80D.t2k-w0.5.mod(22):  Reading nostruct-align/1f80D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31458/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f80D/nostruct-align/1f80D.t2k-w0.5.mod (nostruct-align/1f80D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f80D/nostruct-align/1f80D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.485884
/projects/compbio/experiments/models.97/pdb/2t/2tbs/nostruct-align/2tbs.t2k-w0.5.mod(21):  Reading nostruct-align/2tbs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tbs/nostruct-align/2tbs.t2k-w0.5.mod (nostruct-align/2tbs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tbs/nostruct-align/2tbs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.020882
/projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t2k-w0.5.mod(21):  Reading nostruct-align/1bs2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-22365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t2k-w0.5.mod (nostruct-align/1bs2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.769871
/projects/compbio/experiments/models.97/pdb/1d/1dxrH/nostruct-align/1dxrH.t2k-w0.5.mod(22):  Reading nostruct-align/1dxrH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1687/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrH/nostruct-align/1dxrH.t2k-w0.5.mod (nostruct-align/1dxrH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxrH/nostruct-align/1dxrH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.433903
/projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t2k-w0.5.mod(21):  Reading nostruct-align/1pta.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-6765/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t2k-w0.5.mod (nostruct-align/1pta.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.890911
/projects/compbio/experiments/models.97/pdb/1d/1dxrL/nostruct-align/1dxrL.t2k-w0.5.mod(21):  Reading nostruct-align/1dxrL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-21728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrL/nostruct-align/1dxrL.t2k-w0.5.mod (nostruct-align/1dxrL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxrL/nostruct-align/1dxrL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.939899
/projects/compbio/experiments/models.97/pdb/1d/1dxrM/nostruct-align/1dxrM.t2k-w0.5.mod(22):  Reading nostruct-align/1dxrM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24674/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxrM/nostruct-align/1dxrM.t2k-w0.5.mod (nostruct-align/1dxrM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxrM/nostruct-align/1dxrM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.741911
/projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k-w0.5.mod(21):  Reading nostruct-align/1ptf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5896/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k-w0.5.mod (nostruct-align/1ptf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.296909
/projects/compbio/experiments/models.97/pdb/1b/1bb8/nostruct-align/1bb8.t2k-w0.5.mod(21):  Reading nostruct-align/1bb8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-5745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb8/nostruct-align/1bb8.t2k-w0.5.mod (nostruct-align/1bb8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bb8/nostruct-align/1bb8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.173862
/projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t2k-w0.5.mod(22):  Reading nostruct-align/1bb9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-32720/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t2k-w0.5.mod (nostruct-align/1bb9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.259859
/projects/compbio/experiments/models.97/pdb/1h/1h6gA/nostruct-align/1h6gA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6gA/nostruct-align/1h6gA.t2k-w0.5.mod (nostruct-align/1h6gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6gA/nostruct-align/1h6gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.810877
/projects/compbio/experiments/models.97/pdb/1g/1gtmA/nostruct-align/1gtmA.t2k-w0.5.mod(21):  Reading nostruct-align/1gtmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-32469/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtmA/nostruct-align/1gtmA.t2k-w0.5.mod (nostruct-align/1gtmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gtmA/nostruct-align/1gtmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.517906
/projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k-w0.5.mod(21):  Reading nostruct-align/1i2mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23208/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k-w0.5.mod (nostruct-align/1i2mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i2mA/nostruct-align/1i2mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.137897
/projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t2k-w0.5.mod(22):  Reading nostruct-align/1mdyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30131/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t2k-w0.5.mod (nostruct-align/1mdyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.286873
/projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t2k-w0.5.mod(21):  Reading nostruct-align/1qdbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-8605/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t2k-w0.5.mod (nostruct-align/1qdbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.946861
/projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k-w0.5.mod (nostruct-align/1dqiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqiA/nostruct-align/1dqiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.500868
/projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t2k-w0.5.mod(22):  Reading nostruct-align/1ptq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t2k-w0.5.mod (nostruct-align/1ptq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.409904
/projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t2k-w0.5.mod(21):  Reading nostruct-align/1ybvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t2k-w0.5.mod (nostruct-align/1ybvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.427887
/projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t2k-w0.5.mod(21):  Reading nostruct-align/1bag.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t2k-w0.5.mod (nostruct-align/1bag.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.204885
/projects/compbio/experiments/models.97/pdb/1b/1bah/nostruct-align/1bah.t2k-w0.5.mod(22):  Reading nostruct-align/1bah.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12258/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bah/nostruct-align/1bah.t2k-w0.5.mod (nostruct-align/1bah.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bah/nostruct-align/1bah.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.248886
/projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t2k-w0.5.mod(21):  Reading nostruct-align/1mlbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28535/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t2k-w0.5.mod (nostruct-align/1mlbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.469858
/projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t2k-w0.5.mod(21):  Reading nostruct-align/1qklA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15520/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t2k-w0.5.mod (nostruct-align/1qklA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.099863
/projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-w0.5.mod(22):  Reading nostruct-align/1fiuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30990/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-w0.5.mod (nostruct-align/1fiuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fiuA/nostruct-align/1fiuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.819885
/projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t2k-w0.5.mod(21):  Reading nostruct-align/1bak.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-15487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t2k-w0.5.mod (nostruct-align/1bak.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.603859
/projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t2k-w0.5.mod(22):  Reading nostruct-align/1pty.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-12220/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t2k-w0.5.mod (nostruct-align/1pty.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.422892
/projects/compbio/experiments/models.97/pdb/1d/1dxsA/nostruct-align/1dxsA.t2k-w0.5.mod(22):  Reading nostruct-align/1dxsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15476/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxsA/nostruct-align/1dxsA.t2k-w0.5.mod (nostruct-align/1dxsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxsA/nostruct-align/1dxsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.698908
/projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t2k-w0.5.mod(21):  Reading nostruct-align/1dz1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-5073/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t2k-w0.5.mod (nostruct-align/1dz1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.555910
/projects/compbio/experiments/models.97/pdb/1f/1f81A/nostruct-align/1f81A.t2k-w0.5.mod(21):  Reading nostruct-align/1f81A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3669/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f81A/nostruct-align/1f81A.t2k-w0.5.mod (nostruct-align/1f81A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f81A/nostruct-align/1f81A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.518873
/projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t2k-w0.5.mod(21):  Reading nostruct-align/1bal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23576/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t2k-w0.5.mod (nostruct-align/1bal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.147871
/projects/compbio/experiments/models.97/pdb/1d/1dz1B/nostruct-align/1dz1B.t2k-w0.5.mod(21):  Reading nostruct-align/1dz1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-22480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz1B/nostruct-align/1dz1B.t2k-w0.5.mod (nostruct-align/1dz1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dz1B/nostruct-align/1dz1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.555910
/projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k-w0.5.mod(21):  Reading nostruct-align/1auoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5474/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k-w0.5.mod (nostruct-align/1auoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.337881
/projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t2k-w0.5.mod(21):  Reading nostruct-align/1bam.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9926/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t2k-w0.5.mod (nostruct-align/1bam.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.106909
/projects/compbio/experiments/models.97/pdb/1c/1c3oA/nostruct-align/1c3oA.t2k-w0.5.mod(21):  Reading nostruct-align/1c3oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-21022/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oA/nostruct-align/1c3oA.t2k-w0.5.mod (nostruct-align/1c3oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3oA/nostruct-align/1c3oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.469864
/projects/compbio/experiments/models.97/pdb/1c/1c3oB/nostruct-align/1c3oB.t2k-w0.5.mod(21):  Reading nostruct-align/1c3oB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-6662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oB/nostruct-align/1c3oB.t2k-w0.5.mod (nostruct-align/1c3oB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3oB/nostruct-align/1c3oB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.017876
/projects/compbio/experiments/models.97/pdb/1c/1c3oC/nostruct-align/1c3oC.t2k-w0.5.mod(21):  Reading nostruct-align/1c3oC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oC/nostruct-align/1c3oC.t2k-w0.5.mod (nostruct-align/1c3oC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3oC/nostruct-align/1c3oC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.928869
/projects/compbio/experiments/models.97/pdb/1e/1ev7A/nostruct-align/1ev7A.t2k-w0.5.mod(22):  Reading nostruct-align/1ev7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13889/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev7A/nostruct-align/1ev7A.t2k-w0.5.mod (nostruct-align/1ev7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ev7A/nostruct-align/1ev7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.149902
/projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k-w0.5.mod(22):  Reading nostruct-align/1g2yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k-w0.5.mod (nostruct-align/1g2yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g2yA/nostruct-align/1g2yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.816906
/projects/compbio/experiments/models.97/pdb/1g/1g47A/nostruct-align/1g47A.t2k-w0.5.mod(21):  Reading nostruct-align/1g47A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-16341/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g47A/nostruct-align/1g47A.t2k-w0.5.mod (nostruct-align/1g47A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g47A/nostruct-align/1g47A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.321865
/projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-w0.5.mod(21):  Reading nostruct-align/1dbwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-w0.5.mod (nostruct-align/1dbwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.785872
/projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t2k-w0.5.mod(21):  Reading nostruct-align/1dd5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-11135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t2k-w0.5.mod (nostruct-align/1dd5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.533892
/projects/compbio/experiments/models.97/pdb/1e/1ev7B/nostruct-align/1ev7B.t2k-w0.5.mod(21):  Reading nostruct-align/1ev7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-4816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ev7B/nostruct-align/1ev7B.t2k-w0.5.mod (nostruct-align/1ev7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ev7B/nostruct-align/1ev7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.022867
/projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t2k-w0.5.mod(21):  Reading nostruct-align/1baq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t2k-w0.5.mod (nostruct-align/1baq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.227861
/projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t2k-w0.5.mod(21):  Reading nostruct-align/1bquA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t2k-w0.5.mod (nostruct-align/1bquA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.285904
/projects/compbio/experiments/models.97/pdb/1c/1c3oE/nostruct-align/1c3oE.t2k-w0.5.mod(21):  Reading nostruct-align/1c3oE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-25922/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oE/nostruct-align/1c3oE.t2k-w0.5.mod (nostruct-align/1c3oE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3oE/nostruct-align/1c3oE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.128878
/projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t2k-w0.5.mod(21):  Reading nostruct-align/1itbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-5737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t2k-w0.5.mod (nostruct-align/1itbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.979885
/projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t2k-w0.5.mod(21):  Reading nostruct-align/1mslA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17475/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t2k-w0.5.mod (nostruct-align/1mslA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.160881
/projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t2k-w0.5.mod(22):  Reading nostruct-align/2tct.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-18812/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t2k-w0.5.mod (nostruct-align/2tct.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.876856
/projects/compbio/experiments/models.97/pdb/1q/1qrvA/nostruct-align/1qrvA.t2k-w0.5.mod(22):  Reading nostruct-align/1qrvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7961/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qrvA/nostruct-align/1qrvA.t2k-w0.5.mod (nostruct-align/1qrvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qrvA/nostruct-align/1qrvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.503868
/projects/compbio/experiments/models.97/pdb/1c/1c3oG/nostruct-align/1c3oG.t2k-w0.5.mod(21):  Reading nostruct-align/1c3oG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18453/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3oG/nostruct-align/1c3oG.t2k-w0.5.mod (nostruct-align/1c3oG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3oG/nostruct-align/1c3oG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.910864
/projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t2k-w0.5.mod(22):  Reading nostruct-align/1puc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-525/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t2k-w0.5.mod (nostruct-align/1puc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.554863
/projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t2k-w0.5.mod(21):  Reading nostruct-align/1bc4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26117/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t2k-w0.5.mod (nostruct-align/1bc4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.085857
/projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t2k-w0.5.mod(22):  Reading nostruct-align/1pud.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6048/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t2k-w0.5.mod (nostruct-align/1pud.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.162861
/projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t2k-w0.5.mod(21):  Reading nostruct-align/1bax.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t2k-w0.5.mod (nostruct-align/1bax.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.045858
/projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-w0.5.mod (nostruct-align/1h6hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6hA/nostruct-align/1h6hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.102875
/projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t2k-w0.5.mod(21):  Reading nostruct-align/3gatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t2k-w0.5.mod (nostruct-align/3gatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.472876
/projects/compbio/experiments/models.97/pdb/1e/1e3dA/nostruct-align/1e3dA.t2k-w0.5.mod(21):  Reading nostruct-align/1e3dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14003/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3dA/nostruct-align/1e3dA.t2k-w0.5.mod (nostruct-align/1e3dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3dA/nostruct-align/1e3dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.187855
/projects/compbio/experiments/models.97/pdb/6l/6ldh/nostruct-align/6ldh.t2k-w0.5.mod(21):  Reading nostruct-align/6ldh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-19740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6l/6ldh/nostruct-align/6ldh.t2k-w0.5.mod (nostruct-align/6ldh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6l/6ldh/nostruct-align/6ldh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.804861
/projects/compbio/experiments/models.97/pdb/1e/1e3dB/nostruct-align/1e3dB.t2k-w0.5.mod(21):  Reading nostruct-align/1e3dB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-8012/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3dB/nostruct-align/1e3dB.t2k-w0.5.mod (nostruct-align/1e3dB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3dB/nostruct-align/1e3dB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.524874
/projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t2k-w0.5.mod(21):  Reading nostruct-align/1bba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19106/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t2k-w0.5.mod (nostruct-align/1bba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.073866
/projects/compbio/experiments/models.97/pdb/1j/1jc4A/nostruct-align/1jc4A.t2k-w0.5.mod(22):  Reading nostruct-align/1jc4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jc4A/nostruct-align/1jc4A.t2k-w0.5.mod (nostruct-align/1jc4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jc4A/nostruct-align/1jc4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.401861
/projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t2k-w0.5.mod(21):  Reading nostruct-align/1put.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32147/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t2k-w0.5.mod (nostruct-align/1put.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.581884
/projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t2k-w0.5.mod(21):  Reading nostruct-align/1bbg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30952/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t2k-w0.5.mod (nostruct-align/1bbg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.451880
/projects/compbio/experiments/models.97/pdb/1q/1qkmA/nostruct-align/1qkmA.t2k-w0.5.mod(21):  Reading nostruct-align/1qkmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-26821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkmA/nostruct-align/1qkmA.t2k-w0.5.mod (nostruct-align/1qkmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qkmA/nostruct-align/1qkmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.536882
/projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t2k-w0.5.mod(21):  Reading nostruct-align/1fivA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10015/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t2k-w0.5.mod (nostruct-align/1fivA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.984863
/projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t2k-w0.5.mod(21):  Reading nostruct-align/1mlcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-16888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t2k-w0.5.mod (nostruct-align/1mlcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.600874
/projects/compbio/experiments/models.97/pdb/1f/1f82A/nostruct-align/1f82A.t2k-w0.5.mod(21):  Reading nostruct-align/1f82A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-15910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f82A/nostruct-align/1f82A.t2k-w0.5.mod (nostruct-align/1f82A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f82A/nostruct-align/1f82A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.733879
/projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t2k-w0.5.mod(21):  Reading nostruct-align/1bbl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t2k-w0.5.mod (nostruct-align/1bbl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.246906
/projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t2k-w0.5.mod(21):  Reading nostruct-align/1dxtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2452/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t2k-w0.5.mod (nostruct-align/1dxtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.283882
/projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-w0.5.mod(22):  Reading nostruct-align/1c3pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1385/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-w0.5.mod (nostruct-align/1c3pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.244881
/projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t2k-w0.5.mod(21):  Reading nostruct-align/1ile.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-6704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t2k-w0.5.mod (nostruct-align/1ile.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.157898
/projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t2k-w0.5.mod(21):  Reading nostruct-align/1bbo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15951/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t2k-w0.5.mod (nostruct-align/1bbo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.118858
/projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-w0.5.mod(22):  Reading nostruct-align/1dbxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-w0.5.mod (nostruct-align/1dbxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbxA/nostruct-align/1dbxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.846909
/projects/compbio/experiments/models.97/pdb/1d/1dd6A/nostruct-align/1dd6A.t2k-w0.5.mod(21):  Reading nostruct-align/1dd6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7999/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd6A/nostruct-align/1dd6A.t2k-w0.5.mod (nostruct-align/1dd6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dd6A/nostruct-align/1dd6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.547867
/projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t2k-w0.5.mod(21):  Reading nostruct-align/1bs4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-27152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t2k-w0.5.mod (nostruct-align/1bs4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.326855
/projects/compbio/experiments/models.97/pdb/2t/2tdt/nostruct-align/2tdt.t2k-w0.5.mod(21):  Reading nostruct-align/2tdt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3233/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tdt/nostruct-align/2tdt.t2k-w0.5.mod (nostruct-align/2tdt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tdt/nostruct-align/2tdt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.475901
/projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t2k-w0.5.mod(21):  Reading nostruct-align/1ilk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t2k-w0.5.mod (nostruct-align/1ilk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.245886
/projects/compbio/experiments/models.97/pdb/1g/1gmeA/nostruct-align/1gmeA.t2k-w0.5.mod(22):  Reading nostruct-align/1gmeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6132/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmeA/nostruct-align/1gmeA.t2k-w0.5.mod (nostruct-align/1gmeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gmeA/nostruct-align/1gmeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.481890
/projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k-w0.5.mod(22):  Reading nostruct-align/2erl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13575/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k-w0.5.mod (nostruct-align/2erl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.741852
/projects/compbio/experiments/models.97/pdb/1b/1bby/nostruct-align/1bby.t2k-w0.5.mod(21):  Reading nostruct-align/1bby.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-12744/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bby/nostruct-align/1bby.t2k-w0.5.mod (nostruct-align/1bby.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bby/nostruct-align/1bby.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.662888
/projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t2k-w0.5.mod(22):  Reading nostruct-align/1bd8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-8178/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t2k-w0.5.mod (nostruct-align/1bd8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.763851
/projects/compbio/experiments/models.97/pdb/1f/1fxiA/nostruct-align/1fxiA.t2k-w0.5.mod(21):  Reading nostruct-align/1fxiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3098/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxiA/nostruct-align/1fxiA.t2k-w0.5.mod (nostruct-align/1fxiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxiA/nostruct-align/1fxiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.114906
/projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t2k-w0.5.mod(21):  Reading nostruct-align/2alcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t2k-w0.5.mod (nostruct-align/2alcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.101856
/projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-w0.5.mod(22):  Reading nostruct-align/1jy1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-w0.5.mod (nostruct-align/1jy1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy1A/nostruct-align/1jy1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.970865
/projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t2k-w0.5.mod(21):  Reading nostruct-align/1pvl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-18401/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t2k-w0.5.mod (nostruct-align/1pvl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.023901
/projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-w0.5.mod(22):  Reading nostruct-align/1qddA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-15198/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-w0.5.mod (nostruct-align/1qddA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.019852
/projects/compbio/experiments/models.97/pdb/1f/1fbmC/nostruct-align/1fbmC.t2k-w0.5.mod(21):  Reading nostruct-align/1fbmC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-14477/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbmC/nostruct-align/1fbmC.t2k-w0.5.mod (nostruct-align/1fbmC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fbmC/nostruct-align/1fbmC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.135893
/projects/compbio/experiments/models.97/pdb/1b/1bcg/nostruct-align/1bcg.t2k-w0.5.mod(21):  Reading nostruct-align/1bcg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-28293/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcg/nostruct-align/1bcg.t2k-w0.5.mod (nostruct-align/1bcg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bcg/nostruct-align/1bcg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.363857
/projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t2k-w0.5.mod(21):  Reading nostruct-align/1tnrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t2k-w0.5.mod (nostruct-align/1tnrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.088886
/projects/compbio/experiments/models.97/pdb/1m/1mldA/nostruct-align/1mldA.t2k-w0.5.mod(22):  Reading nostruct-align/1mldA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-24014/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mldA/nostruct-align/1mldA.t2k-w0.5.mod (nostruct-align/1mldA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mldA/nostruct-align/1mldA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.662888
/projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t2k-w0.5.mod(21):  Reading nostruct-align/2bosA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12384/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t2k-w0.5.mod (nostruct-align/2bosA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.981863
/projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t2k-w0.5.mod(21):  Reading nostruct-align/1bjmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t2k-w0.5.mod (nostruct-align/1bjmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.785902
/projects/compbio/experiments/models.97/pdb/1i/1i9yA/nostruct-align/1i9yA.t2k-w0.5.mod(21):  Reading nostruct-align/1i9yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-2143/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9yA/nostruct-align/1i9yA.t2k-w0.5.mod (nostruct-align/1i9yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i9yA/nostruct-align/1i9yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.369877
/projects/compbio/experiments/models.97/pdb/1f/1fiwA/nostruct-align/1fiwA.t2k-w0.5.mod(21):  Reading nostruct-align/1fiwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-25417/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fiwA/nostruct-align/1fiwA.t2k-w0.5.mod (nostruct-align/1fiwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fiwA/nostruct-align/1fiwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.628880
/projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-w0.5.mod(22):  Reading nostruct-align/1fk5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31252/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-w0.5.mod (nostruct-align/1fk5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fk5A/nostruct-align/1fk5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.701864
/projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-w0.5.mod(21):  Reading nostruct-align/1dz3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-836/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-w0.5.mod (nostruct-align/1dz3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.410894
/projects/compbio/experiments/models.97/pdb/1f/1f6uA/nostruct-align/1f6uA.t2k-w0.5.mod(21):  Reading nostruct-align/1f6uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-28190/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6uA/nostruct-align/1f6uA.t2k-w0.5.mod (nostruct-align/1f6uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6uA/nostruct-align/1f6uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.634857
/projects/compbio/experiments/models.97/pdb/1f/1f83A/nostruct-align/1f83A.t2k-w0.5.mod(22):  Reading nostruct-align/1f83A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-1784/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f83A/nostruct-align/1f83A.t2k-w0.5.mod (nostruct-align/1f83A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f83A/nostruct-align/1f83A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.730871
/projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t2k-w0.5.mod(21):  Reading nostruct-align/1r69.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t2k-w0.5.mod (nostruct-align/1r69.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.205858
/projects/compbio/experiments/models.97/pdb/1f/1f83B/nostruct-align/1f83B.t2k-w0.5.mod(22):  Reading nostruct-align/1f83B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10069/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f83B/nostruct-align/1f83B.t2k-w0.5.mod (nostruct-align/1f83B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f83B/nostruct-align/1f83B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.332857
/projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t2k-w0.5.mod(21):  Reading nostruct-align/1c3qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5746/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t2k-w0.5.mod (nostruct-align/1c3qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.069902
/projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t2k-w0.5.mod(21):  Reading nostruct-align/1bco.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-20876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t2k-w0.5.mod (nostruct-align/1bco.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.790863
/projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t2k-w0.5.mod(21):  Reading nostruct-align/1be1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t2k-w0.5.mod (nostruct-align/1be1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.067873
/projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t2k-w0.5.mod(21):  Reading nostruct-align/1bct.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-29080/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t2k-w0.5.mod (nostruct-align/1bct.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.811852
/projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t2k-w0.5.mod(21):  Reading nostruct-align/1iml.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7159/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t2k-w0.5.mod (nostruct-align/1iml.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.643900
/projects/compbio/experiments/models.97/pdb/1f/1fxjA/nostruct-align/1fxjA.t2k-w0.5.mod(22):  Reading nostruct-align/1fxjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxjA/nostruct-align/1fxjA.t2k-w0.5.mod (nostruct-align/1fxjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxjA/nostruct-align/1fxjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.655909
/projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t2k-w0.5.mod(21):  Reading nostruct-align/1hilB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-20643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t2k-w0.5.mod (nostruct-align/1hilB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.579878
/projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t2k-w0.5.mod(21):  Reading nostruct-align/1imt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14191/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t2k-w0.5.mod (nostruct-align/1imt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.377888
/projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ig0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27085/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-w0.5.mod (nostruct-align/1ig0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ig0A/nostruct-align/1ig0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.013866
/projects/compbio/experiments/models.97/pdb/1q/1qdeA/nostruct-align/1qdeA.t2k-w0.5.mod(22):  Reading nostruct-align/1qdeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11178/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdeA/nostruct-align/1qdeA.t2k-w0.5.mod (nostruct-align/1qdeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qdeA/nostruct-align/1qdeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.774887
/projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t2k-w0.5.mod(22):  Reading nostruct-align/1fbnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5091/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t2k-w0.5.mod (nostruct-align/1fbnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.932863
/projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t2k-w0.5.mod(21):  Reading nostruct-align/1bdb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t2k-w0.5.mod (nostruct-align/1bdb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.213898
/projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t2k-w0.5.mod(21):  Reading nostruct-align/1bde.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t2k-w0.5.mod (nostruct-align/1bde.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.870901
/projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k-w0.5.mod(21):  Reading nostruct-align/5rubA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-23224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k-w0.5.mod (nostruct-align/5rubA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.150894
/projects/compbio/experiments/models.97/pdb/1p/1pwt/nostruct-align/1pwt.t2k-w0.5.mod(21):  Reading nostruct-align/1pwt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pwt/nostruct-align/1pwt.t2k-w0.5.mod (nostruct-align/1pwt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pwt/nostruct-align/1pwt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.401863
/projects/compbio/experiments/models.97/pdb/1e/1eo0A/nostruct-align/1eo0A.t2k-w0.5.mod(21):  Reading nostruct-align/1eo0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6040/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo0A/nostruct-align/1eo0A.t2k-w0.5.mod (nostruct-align/1eo0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eo0A/nostruct-align/1eo0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.302858
/projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t2k-w0.5.mod(22):  Reading nostruct-align/1poiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7768/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t2k-w0.5.mod (nostruct-align/1poiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.295858
/projects/compbio/experiments/models.97/pdb/1b/1bdg/nostruct-align/1bdg.t2k-w0.5.mod(21):  Reading nostruct-align/1bdg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-25763/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdg/nostruct-align/1bdg.t2k-w0.5.mod (nostruct-align/1bdg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdg/nostruct-align/1bdg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.828899
/projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t2k-w0.5.mod(22):  Reading nostruct-align/1poiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-31240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t2k-w0.5.mod (nostruct-align/1poiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.347860
/projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t2k-w0.5.mod(22):  Reading nostruct-align/1bjnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2294/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t2k-w0.5.mod (nostruct-align/1bjnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.669891
/projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-w0.5.mod(22):  Reading nostruct-align/1i9zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3572/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-w0.5.mod (nostruct-align/1i9zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i9zA/nostruct-align/1i9zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.577890
/projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k-w0.5.mod(22):  Reading nostruct-align/1jy2N.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-3150/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k-w0.5.mod (nostruct-align/1jy2N.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy2N/nostruct-align/1jy2N.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.106907
/projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k-w0.5.mod(22):  Reading nostruct-align/1jy2O.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11932/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k-w0.5.mod (nostruct-align/1jy2O.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy2O/nostruct-align/1jy2O.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.318905
/projects/compbio/experiments/models.97/pdb/1d/1dz4A/nostruct-align/1dz4A.t2k-w0.5.mod(21):  Reading nostruct-align/1dz4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22226/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dz4A/nostruct-align/1dz4A.t2k-w0.5.mod (nostruct-align/1dz4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dz4A/nostruct-align/1dz4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.377857
/projects/compbio/experiments/models.97/pdb/1f/1f6vA/nostruct-align/1f6vA.t2k-w0.5.mod(21):  Reading nostruct-align/1f6vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-27000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6vA/nostruct-align/1f6vA.t2k-w0.5.mod (nostruct-align/1f6vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6vA/nostruct-align/1f6vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.952875
/projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k-w0.5.mod(22):  Reading nostruct-align/1jy2P.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k-w0.5.mod (nostruct-align/1jy2P.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy2P/nostruct-align/1jy2P.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.765886
/projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t2k-w0.5.mod(21):  Reading nostruct-align/1aurA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-611/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t2k-w0.5.mod (nostruct-align/1aurA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.736868
/projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-w0.5.mod(22):  Reading nostruct-align/1bdo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-1183/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-w0.5.mod (nostruct-align/1bdo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.944906
/projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t2k-w0.5.mod(21):  Reading nostruct-align/1dd8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-5522/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t2k-w0.5.mod (nostruct-align/1dd8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.655909
/projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t2k-w0.5.mod(21):  Reading nostruct-align/1bds.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-32713/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t2k-w0.5.mod (nostruct-align/1bds.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.166889
/projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t2k-w0.5.mod(21):  Reading nostruct-align/1bf2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-4968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t2k-w0.5.mod (nostruct-align/1bf2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.867857
/projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t2k-w0.5.mod(21):  Reading nostruct-align/1nhkL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-1820/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t2k-w0.5.mod (nostruct-align/1nhkL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.088892
/projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t2k-w0.5.mod(21):  Reading nostruct-align/1inp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t2k-w0.5.mod (nostruct-align/1inp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.325890
/projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t2k-w0.5.mod(21):  Reading nostruct-align/1bf8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t2k-w0.5.mod (nostruct-align/1bf8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.676859
/projects/compbio/experiments/models.97/pdb/1f/1fxkA/nostruct-align/1fxkA.t2k-w0.5.mod(22):  Reading nostruct-align/1fxkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxkA/nostruct-align/1fxkA.t2k-w0.5.mod (nostruct-align/1fxkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxkA/nostruct-align/1fxkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.729870
/projects/compbio/experiments/models.97/pdb/1h/1h6kA/nostruct-align/1h6kA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6kA/nostruct-align/1h6kA.t2k-w0.5.mod (nostruct-align/1h6kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6kA/nostruct-align/1h6kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.970890
/projects/compbio/experiments/models.97/pdb/3i/3icb/nostruct-align/3icb.t2k-w0.5.mod(21):  Reading nostruct-align/3icb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3446/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3i/3icb/nostruct-align/3icb.t2k-w0.5.mod (nostruct-align/3icb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3i/3icb/nostruct-align/3icb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.238899
/projects/compbio/experiments/models.97/pdb/1f/1fxkB/nostruct-align/1fxkB.t2k-w0.5.mod(22):  Reading nostruct-align/1fxkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxkB/nostruct-align/1fxkB.t2k-w0.5.mod (nostruct-align/1fxkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxkB/nostruct-align/1fxkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.863892
/projects/compbio/experiments/models.97/pdb/1f/1fxkC/nostruct-align/1fxkC.t2k-w0.5.mod(22):  Reading nostruct-align/1fxkC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2313/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxkC/nostruct-align/1fxkC.t2k-w0.5.mod (nostruct-align/1fxkC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxkC/nostruct-align/1fxkC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.008873
/projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t2k-w0.5.mod(21):  Reading nostruct-align/5pal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-29940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t2k-w0.5.mod (nostruct-align/5pal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.502871
/projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t2k-w0.5.mod(21):  Reading nostruct-align/1gtqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-28468/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t2k-w0.5.mod (nostruct-align/1gtqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.169899
/projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t2k-w0.5.mod(21):  Reading nostruct-align/1efiD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t2k-w0.5.mod (nostruct-align/1efiD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.175863
/projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t2k-w0.5.mod(22):  Reading nostruct-align/1bea.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-24118/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t2k-w0.5.mod (nostruct-align/1bea.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.178911
/projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k-w0.5.mod(22):  Reading nostruct-align/1jayA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k-w0.5.mod (nostruct-align/1jayA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jayA/nostruct-align/1jayA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.128880
/projects/compbio/experiments/models.97/pdb/1j/1jc7A/nostruct-align/1jc7A.t2k-w0.5.mod(21):  Reading nostruct-align/1jc7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-9711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jc7A/nostruct-align/1jc7A.t2k-w0.5.mod (nostruct-align/1jc7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jc7A/nostruct-align/1jc7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.544859
/projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t2k-w0.5.mod(21):  Reading nostruct-align/1bec.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-29871/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t2k-w0.5.mod (nostruct-align/1bec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.650869
/projects/compbio/experiments/models.97/pdb/1b/1bed/nostruct-align/1bed.t2k-w0.5.mod(21):  Reading nostruct-align/1bed.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-25887/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bed/nostruct-align/1bed.t2k-w0.5.mod (nostruct-align/1bed.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bed/nostruct-align/1bed.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.239908
/projects/compbio/experiments/models.97/pdb/1h/1hpwA/nostruct-align/1hpwA.t2k-w0.5.mod(21):  Reading nostruct-align/1hpwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21625/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hpwA/nostruct-align/1hpwA.t2k-w0.5.mod (nostruct-align/1hpwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hpwA/nostruct-align/1hpwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.811905
/projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t2k-w0.5.mod(21):  Reading nostruct-align/2tgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-25097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t2k-w0.5.mod (nostruct-align/2tgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.698906
/projects/compbio/experiments/models.97/pdb/1e/1emsA/nostruct-align/1emsA.t2k-w0.5.mod(21):  Reading nostruct-align/1emsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7467/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emsA/nostruct-align/1emsA.t2k-w0.5.mod (nostruct-align/1emsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1emsA/nostruct-align/1emsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.997854
/projects/compbio/experiments/models.97/pdb/1e/1eo1A/nostruct-align/1eo1A.t2k-w0.5.mod(21):  Reading nostruct-align/1eo1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo1A/nostruct-align/1eo1A.t2k-w0.5.mod (nostruct-align/1eo1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eo1A/nostruct-align/1eo1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.642874
/projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-w0.5.mod(22):  Reading nostruct-align/2tgi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12899/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-w0.5.mod (nostruct-align/2tgi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.839909
/projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t2k-w0.5.mod(22):  Reading nostruct-align/1bjoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t2k-w0.5.mod (nostruct-align/1bjoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.950891
/projects/compbio/experiments/models.97/pdb/1j/1jy3N/nostruct-align/1jy3N.t2k-w0.5.mod(22):  Reading nostruct-align/1jy3N.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy3N/nostruct-align/1jy3N.t2k-w0.5.mod (nostruct-align/1jy3N.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy3N/nostruct-align/1jy3N.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.229904
/projects/compbio/experiments/models.97/pdb/1b/1bei/nostruct-align/1bei.t2k-w0.5.mod(21):  Reading nostruct-align/1bei.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bei/nostruct-align/1bei.t2k-w0.5.mod (nostruct-align/1bei.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bei/nostruct-align/1bei.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.404875
/projects/compbio/experiments/models.97/pdb/1j/1jy3O/nostruct-align/1jy3O.t2k-w0.5.mod(22):  Reading nostruct-align/1jy3O.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2773/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy3O/nostruct-align/1jy3O.t2k-w0.5.mod (nostruct-align/1jy3O.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy3O/nostruct-align/1jy3O.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.318905
/projects/compbio/experiments/models.97/pdb/1j/1jy3P/nostruct-align/1jy3P.t2k-w0.5.mod(22):  Reading nostruct-align/1jy3P.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy3P/nostruct-align/1jy3P.t2k-w0.5.mod (nostruct-align/1jy3P.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy3P/nostruct-align/1jy3P.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.760897
/projects/compbio/experiments/models.97/pdb/1x/1xat/nostruct-align/1xat.t2k-w0.5.mod(21):  Reading nostruct-align/1xat.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-26224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xat/nostruct-align/1xat.t2k-w0.5.mod (nostruct-align/1xat.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xat/nostruct-align/1xat.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.957863
/projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t2k-w0.5.mod(21):  Reading nostruct-align/1beo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-31553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t2k-w0.5.mod (nostruct-align/1beo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.437855
/projects/compbio/experiments/models.97/pdb/1k/1k2fA/nostruct-align/1k2fA.t2k-w0.5.mod(22):  Reading nostruct-align/1k2fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k2fA/nostruct-align/1k2fA.t2k-w0.5.mod (nostruct-align/1k2fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k2fA/nostruct-align/1k2fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.063910
/projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-w0.5.mod(22):  Reading nostruct-align/1dd9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15346/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-w0.5.mod (nostruct-align/1dd9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.693903
/projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t2k-w0.5.mod(21):  Reading nostruct-align/7aatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7021/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t2k-w0.5.mod (nostruct-align/7aatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.112909
/projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t2k-w0.5.mod(22):  Reading nostruct-align/1bg0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-13507/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t2k-w0.5.mod (nostruct-align/1bg0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.985909
/projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t2k-w0.5.mod(22):  Reading nostruct-align/1mspA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t2k-w0.5.mod (nostruct-align/1mspA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.725889
/projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t2k-w0.5.mod(21):  Reading nostruct-align/1ioj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9284/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t2k-w0.5.mod (nostruct-align/1ioj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.615871
/projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t2k-w0.5.mod(21):  Reading nostruct-align/1bet.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t2k-w0.5.mod (nostruct-align/1bet.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.465893
/projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t2k-w0.5.mod(21):  Reading nostruct-align/1bg2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-25378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t2k-w0.5.mod (nostruct-align/1bg2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.597912
/projects/compbio/experiments/models.97/pdb/1h/1h6kZ/nostruct-align/1h6kZ.t2k-w0.5.mod(21):  Reading nostruct-align/1h6kZ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-3067/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6kZ/nostruct-align/1h6kZ.t2k-w0.5.mod (nostruct-align/1h6kZ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6kZ/nostruct-align/1h6kZ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.143909
/projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t2k-w0.5.mod(21):  Reading nostruct-align/1pyc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-31266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t2k-w0.5.mod (nostruct-align/1pyc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.928862
/projects/compbio/experiments/models.97/pdb/1b/1bg4/nostruct-align/1bg4.t2k-w0.5.mod(22):  Reading nostruct-align/1bg4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-30846/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg4/nostruct-align/1bg4.t2k-w0.5.mod (nostruct-align/1bg4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bg4/nostruct-align/1bg4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.321901
/projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-w0.5.mod(21):  Reading nostruct-align/1bg6.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-13048/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-w0.5.mod (nostruct-align/1bg6.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.717894
/projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t2k-w0.5.mod(21):  Reading nostruct-align/1bg7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-12354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t2k-w0.5.mod (nostruct-align/1bg7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.714899
/projects/compbio/experiments/models.97/pdb/1d/1d7bA/nostruct-align/1d7bA.t2k-w0.5.mod(22):  Reading nostruct-align/1d7bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-3561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7bA/nostruct-align/1d7bA.t2k-w0.5.mod (nostruct-align/1d7bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7bA/nostruct-align/1d7bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.586870
/projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-w0.5.mod(21):  Reading nostruct-align/1fxlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-30768/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-w0.5.mod (nostruct-align/1fxlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxlA/nostruct-align/1fxlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.752890
/projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23680/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-w0.5.mod (nostruct-align/1h6lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6lA/nostruct-align/1h6lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.833887
/projects/compbio/experiments/models.97/pdb/1e/1e3hA/nostruct-align/1e3hA.t2k-w0.5.mod(22):  Reading nostruct-align/1e3hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-29369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3hA/nostruct-align/1e3hA.t2k-w0.5.mod (nostruct-align/1e3hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3hA/nostruct-align/1e3hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.701862
/projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t2k-w0.5.mod(22):  Reading nostruct-align/2hntE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t2k-w0.5.mod (nostruct-align/2hntE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.072853
/projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t2k-w0.5.mod(21):  Reading nostruct-align/1xbd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-12576/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t2k-w0.5.mod (nostruct-align/1xbd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.339878
/projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t2k-w0.5.mod(21):  Reading nostruct-align/1bcfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26092/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t2k-w0.5.mod (nostruct-align/1bcfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.810854
/projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t2k-w0.5.mod(21):  Reading nostruct-align/1gtrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8510/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t2k-w0.5.mod (nostruct-align/1gtrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.260868
/projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-w0.5.mod(22):  Reading nostruct-align/1i40A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-w0.5.mod (nostruct-align/1i40A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i40A/nostruct-align/1i40A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.157875
/projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t2k-w0.5.mod(21):  Reading nostruct-align/1iow.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15122/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t2k-w0.5.mod (nostruct-align/1iow.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.669897
/projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t2k-w0.5.mod(21):  Reading nostruct-align/1pyp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-4888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t2k-w0.5.mod (nostruct-align/1pyp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.784870
/projects/compbio/experiments/models.97/pdb/1d/1dqnA/nostruct-align/1dqnA.t2k-w0.5.mod(21):  Reading nostruct-align/1dqnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6494/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqnA/nostruct-align/1dqnA.t2k-w0.5.mod (nostruct-align/1dqnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqnA/nostruct-align/1dqnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.547857
/projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t2k-w0.5.mod(22):  Reading nostruct-align/1bfd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-3533/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t2k-w0.5.mod (nostruct-align/1bfd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.153873
/projects/compbio/experiments/models.97/pdb/1h/1hr6A/nostruct-align/1hr6A.t2k-w0.5.mod(21):  Reading nostruct-align/1hr6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-17676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hr6A/nostruct-align/1hr6A.t2k-w0.5.mod (nostruct-align/1hr6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hr6A/nostruct-align/1hr6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.299911
/projects/compbio/experiments/models.97/pdb/1h/1hr6B/nostruct-align/1hr6B.t2k-w0.5.mod(21):  Reading nostruct-align/1hr6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22343/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hr6B/nostruct-align/1hr6B.t2k-w0.5.mod (nostruct-align/1hr6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hr6B/nostruct-align/1hr6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.454895
/projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t2k-w0.5.mod(21):  Reading nostruct-align/1bfg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-18688/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t2k-w0.5.mod (nostruct-align/1bfg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.111860
/projects/compbio/experiments/models.97/pdb/1b/1bfi/nostruct-align/1bfi.t2k-w0.5.mod(21):  Reading nostruct-align/1bfi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-8908/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfi/nostruct-align/1bfi.t2k-w0.5.mod (nostruct-align/1bfi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bfi/nostruct-align/1bfi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.260874
/projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-w0.5.mod(22):  Reading nostruct-align/1f86A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10259/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-w0.5.mod (nostruct-align/1f86A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f86A/nostruct-align/1f86A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.454866
/projects/compbio/experiments/models.97/pdb/4r/4rhv1/nostruct-align/4rhv1.t2k-w0.5.mod(21):  Reading nostruct-align/4rhv1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28710/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rhv1/nostruct-align/4rhv1.t2k-w0.5.mod (nostruct-align/4rhv1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4r/4rhv1/nostruct-align/4rhv1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.656855
/projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t2k-w0.5.mod(21):  Reading nostruct-align/1ipd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-28918/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t2k-w0.5.mod (nostruct-align/1ipd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.964861
/projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t2k-w0.5.mod(21):  Reading nostruct-align/5tmpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31838/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t2k-w0.5.mod (nostruct-align/5tmpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.058884
/projects/compbio/experiments/models.97/pdb/4r/4rhv3/nostruct-align/4rhv3.t2k-w0.5.mod(21):  Reading nostruct-align/4rhv3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-3780/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rhv3/nostruct-align/4rhv3.t2k-w0.5.mod (nostruct-align/4rhv3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4r/4rhv3/nostruct-align/4rhv3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.603907
/projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t2k-w0.5.mod(21):  Reading nostruct-align/1pvuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-21673/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t2k-w0.5.mod (nostruct-align/1pvuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.062908
/projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t2k-w0.5.mod(21):  Reading nostruct-align/4rhv4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-2705/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t2k-w0.5.mod (nostruct-align/4rhv4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.343889
/projects/compbio/experiments/models.97/pdb/1z/1zfjA/nostruct-align/1zfjA.t2k-w0.5.mod(22):  Reading nostruct-align/1zfjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31273/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfjA/nostruct-align/1zfjA.t2k-w0.5.mod (nostruct-align/1zfjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zfjA/nostruct-align/1zfjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.680868
/projects/compbio/experiments/models.97/pdb/1b/1bh0/nostruct-align/1bh0.t2k-w0.5.mod(22):  Reading nostruct-align/1bh0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh0/nostruct-align/1bh0.t2k-w0.5.mod (nostruct-align/1bh0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bh0/nostruct-align/1bh0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.872854
/projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22):  Reading nostruct-align/3pnp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod (nostruct-align/3pnp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.166889
/projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qt9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-12727/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t2k-w0.5.mod (nostruct-align/1qt9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.110907
/projects/compbio/experiments/models.97/pdb/1b/1bh1/nostruct-align/1bh1.t2k-w0.5.mod(21):  Reading nostruct-align/1bh1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh1/nostruct-align/1bh1.t2k-w0.5.mod (nostruct-align/1bh1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bh1/nostruct-align/1bh1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.540871
/projects/compbio/experiments/models.97/pdb/1j/1jpmA/nostruct-align/1jpmA.t2k-w0.5.mod(22):  Reading nostruct-align/1jpmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-20976/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpmA/nostruct-align/1jpmA.t2k-w0.5.mod (nostruct-align/1jpmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jpmA/nostruct-align/1jpmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.659885
/projects/compbio/experiments/models.97/pdb/1b/1bh3/nostruct-align/1bh3.t2k-w0.5.mod(22):  Reading nostruct-align/1bh3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-17458/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh3/nostruct-align/1bh3.t2k-w0.5.mod (nostruct-align/1bh3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bh3/nostruct-align/1bh3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.522902
/projects/compbio/experiments/models.97/pdb/1b/1bh4/nostruct-align/1bh4.t2k-w0.5.mod(21):  Reading nostruct-align/1bh4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-10774/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bh4/nostruct-align/1bh4.t2k-w0.5.mod (nostruct-align/1bh4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bh4/nostruct-align/1bh4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.054876
/projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-w0.5.mod(22):  Reading nostruct-align/1gmiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-6835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-w0.5.mod (nostruct-align/1gmiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gmiA/nostruct-align/1gmiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.886873
/projects/compbio/experiments/models.97/pdb/1d/1d7cA/nostruct-align/1d7cA.t2k-w0.5.mod(22):  Reading nostruct-align/1d7cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25658/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7cA/nostruct-align/1d7cA.t2k-w0.5.mod (nostruct-align/1d7cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7cA/nostruct-align/1d7cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.605864
/projects/compbio/experiments/models.97/pdb/1f/1fxmA/nostruct-align/1fxmA.t2k-w0.5.mod(22):  Reading nostruct-align/1fxmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxmA/nostruct-align/1fxmA.t2k-w0.5.mod (nostruct-align/1fxmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxmA/nostruct-align/1fxmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.355896
/projects/compbio/experiments/models.97/pdb/1l/1l5wA/nostruct-align/1l5wA.t2k-w0.5.mod(22):  Reading nostruct-align/1l5wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30658/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l5wA/nostruct-align/1l5wA.t2k-w0.5.mod (nostruct-align/1l5wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l5wA/nostruct-align/1l5wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.160902
/projects/compbio/experiments/models.97/pdb/1j/1jy5A/nostruct-align/1jy5A.t2k-w0.5.mod(22):  Reading nostruct-align/1jy5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15210/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy5A/nostruct-align/1jy5A.t2k-w0.5.mod (nostruct-align/1jy5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy5A/nostruct-align/1jy5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.872904
/projects/compbio/experiments/models.97/pdb/1i/1ig3A/nostruct-align/1ig3A.t2k-w0.5.mod(21):  Reading nostruct-align/1ig3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-9395/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig3A/nostruct-align/1ig3A.t2k-w0.5.mod (nostruct-align/1ig3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ig3A/nostruct-align/1ig3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.225861
/projects/compbio/experiments/models.97/pdb/1i/1i2sA/nostruct-align/1i2sA.t2k-w0.5.mod(22):  Reading nostruct-align/1i2sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2sA/nostruct-align/1i2sA.t2k-w0.5.mod (nostruct-align/1i2sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i2sA/nostruct-align/1i2sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.278893
/projects/compbio/experiments/models.97/pdb/1j/1jc9A/nostruct-align/1jc9A.t2k-w0.5.mod(22):  Reading nostruct-align/1jc9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32455/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jc9A/nostruct-align/1jc9A.t2k-w0.5.mod (nostruct-align/1jc9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jc9A/nostruct-align/1jc9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.057877
/projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-w0.5.mod(22):  Reading nostruct-align/1bgc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-14990/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-w0.5.mod (nostruct-align/1bgc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.909882
/projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t2k-w0.5.mod(22):  Reading nostruct-align/1lpbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t2k-w0.5.mod (nostruct-align/1lpbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.675852
/projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-w0.5.mod(22):  Reading nostruct-align/1bgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22830/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-w0.5.mod (nostruct-align/1bgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.147902
/projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-w0.5.mod(22):  Reading nostruct-align/1qkrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1824/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-w0.5.mod (nostruct-align/1qkrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qkrA/nostruct-align/1qkrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.423901
/projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t2k-w0.5.mod(21):  Reading nostruct-align/1bgj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-30504/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t2k-w0.5.mod (nostruct-align/1bgj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.775877
/projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t2k-w0.5.mod(21):  Reading nostruct-align/1bgk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20580/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t2k-w0.5.mod (nostruct-align/1bgk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.431906
/projects/compbio/experiments/models.97/pdb/1f/1f6yA/nostruct-align/1f6yA.t2k-w0.5.mod(22):  Reading nostruct-align/1f6yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-6279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f6yA/nostruct-align/1f6yA.t2k-w0.5.mod (nostruct-align/1f6yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f6yA/nostruct-align/1f6yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.318890
/projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-w0.5.mod(22):  Reading nostruct-align/1jidA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-w0.5.mod (nostruct-align/1jidA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jidA/nostruct-align/1jidA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.759871
/projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t2k-w0.5.mod(21):  Reading nostruct-align/1auuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-5254/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t2k-w0.5.mod (nostruct-align/1auuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.193855
/projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t2k-w0.5.mod(21):  Reading nostruct-align/1bgp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24889/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t2k-w0.5.mod (nostruct-align/1bgp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.262899
/projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t2k-w0.5.mod(21):  Reading nostruct-align/1ithA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t2k-w0.5.mod (nostruct-align/1ithA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.030905
/projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t2k-w0.5.mod(22):  Reading nostruct-align/1bi0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-16450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t2k-w0.5.mod (nostruct-align/1bi0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.582891
/projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t2k-w0.5.mod(22):  Reading nostruct-align/1aa7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-27375/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t2k-w0.5.mod (nostruct-align/1aa7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.006857
/projects/compbio/experiments/models.97/pdb/1j/1jpnA/nostruct-align/1jpnA.t2k-w0.5.mod(22):  Reading nostruct-align/1jpnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28803/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpnA/nostruct-align/1jpnA.t2k-w0.5.mod (nostruct-align/1jpnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jpnA/nostruct-align/1jpnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.456888
/projects/compbio/experiments/models.97/pdb/1g/1gmjA/nostruct-align/1gmjA.t2k-w0.5.mod(22):  Reading nostruct-align/1gmjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmjA/nostruct-align/1gmjA.t2k-w0.5.mod (nostruct-align/1gmjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gmjA/nostruct-align/1gmjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.066895
/projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k-w0.5.mod(22):  Reading nostruct-align/2sicI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-32365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k-w0.5.mod (nostruct-align/2sicI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.764881
/projects/compbio/experiments/models.97/pdb/1e/1e3jA/nostruct-align/1e3jA.t2k-w0.5.mod(21):  Reading nostruct-align/1e3jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-15198/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3jA/nostruct-align/1e3jA.t2k-w0.5.mod (nostruct-align/1e3jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3jA/nostruct-align/1e3jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.337902
/projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-w0.5.mod(22):  Reading nostruct-align/3proC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-w0.5.mod (nostruct-align/3proC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.327888
/projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-w0.5.mod(22):  Reading nostruct-align/1i2tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-w0.5.mod (nostruct-align/1i2tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i2tA/nostruct-align/1i2tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.127872
/projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t2k-w0.5.mod(21):  Reading nostruct-align/3proD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-20883/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t2k-w0.5.mod (nostruct-align/3proD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.301870
/projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t2k-w0.5.mod(21):  Reading nostruct-align/1bhb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-2602/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t2k-w0.5.mod (nostruct-align/1bhb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.903893
/projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-w0.5.mod(21):  Reading nostruct-align/1dqpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-26648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-w0.5.mod (nostruct-align/1dqpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqpA/nostruct-align/1dqpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.657894
/projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t2k-w0.5.mod(21):  Reading nostruct-align/7apiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-4501/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t2k-w0.5.mod (nostruct-align/7apiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.490902
/projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t2k-w0.5.mod(21):  Reading nostruct-align/1bhe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3381/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t2k-w0.5.mod (nostruct-align/1bhe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.147856
/projects/compbio/experiments/models.97/pdb/1e/1emvA/nostruct-align/1emvA.t2k-w0.5.mod(22):  Reading nostruct-align/1emvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emvA/nostruct-align/1emvA.t2k-w0.5.mod (nostruct-align/1emvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1emvA/nostruct-align/1emvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.450911
/projects/compbio/experiments/models.97/pdb/1e/1emvB/nostruct-align/1emvB.t2k-w0.5.mod(22):  Reading nostruct-align/1emvB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10944/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emvB/nostruct-align/1emvB.t2k-w0.5.mod (nostruct-align/1emvB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1emvB/nostruct-align/1emvB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.008888
/projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t2k-w0.5.mod(22):  Reading nostruct-align/1bl0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t2k-w0.5.mod (nostruct-align/1bl0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.721899
/projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t2k-w0.5.mod(21):  Reading nostruct-align/1bhi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25507/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t2k-w0.5.mod (nostruct-align/1bhi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.859871
/projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t2k-w0.5.mod(21):  Reading nostruct-align/1qm1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-13851/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t2k-w0.5.mod (nostruct-align/1qm1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.561884
/projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-w0.5.mod(22):  Reading nostruct-align/1qksA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-26489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-w0.5.mod (nostruct-align/1qksA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.829874
/projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t2k-w0.5.mod(21):  Reading nostruct-align/1dxzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20558/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t2k-w0.5.mod (nostruct-align/1dxzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.804907
/projects/compbio/experiments/models.97/pdb/1f/1f88A/nostruct-align/1f88A.t2k-w0.5.mod(21):  Reading nostruct-align/1f88A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-28484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f88A/nostruct-align/1f88A.t2k-w0.5.mod (nostruct-align/1f88A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f88A/nostruct-align/1f88A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -41.656868
/projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t2k-w0.5.mod(22):  Reading nostruct-align/1auvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1366/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t2k-w0.5.mod (nostruct-align/1auvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.930857
/projects/compbio/experiments/models.97/pdb/1k/1kekA/nostruct-align/1kekA.t2k-w0.5.mod(22):  Reading nostruct-align/1kekA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-23377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kekA/nostruct-align/1kekA.t2k-w0.5.mod (nostruct-align/1kekA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kekA/nostruct-align/1kekA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.424877
/projects/compbio/experiments/models.97/pdb/1i/1irf/nostruct-align/1irf.t2k-w0.5.mod(21):  Reading nostruct-align/1irf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-27496/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irf/nostruct-align/1irf.t2k-w0.5.mod (nostruct-align/1irf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irf/nostruct-align/1irf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.528887
/projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k-w0.5.mod(21):  Reading nostruct-align/1bhp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k-w0.5.mod (nostruct-align/1bhp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.510862
/projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t2k-w0.5.mod(21):  Reading nostruct-align/1aa8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-1809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t2k-w0.5.mod (nostruct-align/1aa8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.429873
/projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t2k-w0.5.mod(21):  Reading nostruct-align/1irk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-19606/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t2k-w0.5.mod (nostruct-align/1irk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.140863
/projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t2k-w0.5.mod(21):  Reading nostruct-align/1bhu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16087/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t2k-w0.5.mod (nostruct-align/1bhu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.775869
/projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t2k-w0.5.mod(21):  Reading nostruct-align/1irl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-8848/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t2k-w0.5.mod (nostruct-align/1irl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.047911
/projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t2k-w0.5.mod(22):  Reading nostruct-align/16pk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-15030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t2k-w0.5.mod (nostruct-align/16pk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.757898
/projects/compbio/experiments/models.97/pdb/1n/1noyA/nostruct-align/1noyA.t2k-w0.5.mod(21):  Reading nostruct-align/1noyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1noyA/nostruct-align/1noyA.t2k-w0.5.mod (nostruct-align/1noyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1noyA/nostruct-align/1noyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.353903
/projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t2k-w0.5.mod(21):  Reading nostruct-align/1bj5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-1903/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t2k-w0.5.mod (nostruct-align/1bj5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.138897
/projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t2k-w0.5.mod(21):  Reading nostruct-align/1iro.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t2k-w0.5.mod (nostruct-align/1iro.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.172876
/projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k-w0.5.mod(21):  Reading nostruct-align/1bj7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-26383/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k-w0.5.mod (nostruct-align/1bj7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.302887
/projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t2k-w0.5.mod(21):  Reading nostruct-align/1irp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t2k-w0.5.mod (nostruct-align/1irp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.880888
/projects/compbio/experiments/models.97/pdb/1k/1k9sA/nostruct-align/1k9sA.t2k-w0.5.mod(22):  Reading nostruct-align/1k9sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3569/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k9sA/nostruct-align/1k9sA.t2k-w0.5.mod (nostruct-align/1k9sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k9sA/nostruct-align/1k9sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.425865
/projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t2k-w0.5.mod(21):  Reading nostruct-align/1bj8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t2k-w0.5.mod (nostruct-align/1bj8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.627882
/projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-w0.5.mod(22):  Reading nostruct-align/1fxoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4955/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-w0.5.mod (nostruct-align/1fxoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxoA/nostruct-align/1fxoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.077860
/projects/compbio/experiments/models.97/pdb/1h/1h6oA/nostruct-align/1h6oA.t2k-w0.5.mod(21):  Reading nostruct-align/1h6oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23547/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6oA/nostruct-align/1h6oA.t2k-w0.5.mod (nostruct-align/1h6oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6oA/nostruct-align/1h6oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.016872
/projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k-w0.5.mod(21):  Reading nostruct-align/1ig5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-8857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k-w0.5.mod (nostruct-align/1ig5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ig5A/nostruct-align/1ig5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.329865
/projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t2k-w0.5.mod(22):  Reading nostruct-align/1bia.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t2k-w0.5.mod (nostruct-align/1bia.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.873861
/projects/compbio/experiments/models.97/pdb/1d/1dqqA/nostruct-align/1dqqA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqqA/nostruct-align/1dqqA.t2k-w0.5.mod (nostruct-align/1dqqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqqA/nostruct-align/1dqqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.286879
/projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t2k-w0.5.mod(21):  Reading nostruct-align/1bib.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27576/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t2k-w0.5.mod (nostruct-align/1bib.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.998856
/projects/compbio/experiments/models.97/pdb/1d/1dqqB/nostruct-align/1dqqB.t2k-w0.5.mod(21):  Reading nostruct-align/1dqqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-27945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqqB/nostruct-align/1dqqB.t2k-w0.5.mod (nostruct-align/1dqqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqqB/nostruct-align/1dqqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.774889
/projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t2k-w0.5.mod(21):  Reading nostruct-align/1srrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-5163/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t2k-w0.5.mod (nostruct-align/1srrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.700861
/projects/compbio/experiments/models.97/pdb/1e/1emwA/nostruct-align/1emwA.t2k-w0.5.mod(21):  Reading nostruct-align/1emwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-4215/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emwA/nostruct-align/1emwA.t2k-w0.5.mod (nostruct-align/1emwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1emwA/nostruct-align/1emwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.369907
/projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t2k-w0.5.mod(21):  Reading nostruct-align/1ponA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-12694/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t2k-w0.5.mod (nostruct-align/1ponA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.804861
/projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t2k-w0.5.mod(21):  Reading nostruct-align/1xel.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-22155/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t2k-w0.5.mod (nostruct-align/1xel.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.613909
/projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t2k-w0.5.mod(21):  Reading nostruct-align/1bif.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3577/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t2k-w0.5.mod (nostruct-align/1bif.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.080904
/projects/compbio/experiments/models.97/pdb/1b/1big/nostruct-align/1big.t2k-w0.5.mod(22):  Reading nostruct-align/1big.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16824/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1big/nostruct-align/1big.t2k-w0.5.mod (nostruct-align/1big.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1big/nostruct-align/1big.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.261881
/projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t2k-w0.5.mod(21):  Reading nostruct-align/1ponB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-15850/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t2k-w0.5.mod (nostruct-align/1ponB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.702892
/projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t2k-w0.5.mod(21):  Reading nostruct-align/1xnaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-16328/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t2k-w0.5.mod (nostruct-align/1xnaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.257902
/projects/compbio/experiments/models.97/pdb/1f/1f89A/nostruct-align/1f89A.t2k-w0.5.mod(21):  Reading nostruct-align/1f89A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-11597/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f89A/nostruct-align/1f89A.t2k-w0.5.mod (nostruct-align/1f89A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f89A/nostruct-align/1f89A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.895887
/projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t2k-w0.5.mod(21):  Reading nostruct-align/1cfyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-12454/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t2k-w0.5.mod (nostruct-align/1cfyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.859900
/projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t2k-w0.5.mod(22):  Reading nostruct-align/2irfG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13861/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t2k-w0.5.mod (nostruct-align/2irfG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.507889
/projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t2k-w0.5.mod(22):  Reading nostruct-align/1xer.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32451/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t2k-w0.5.mod (nostruct-align/1xer.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.164879
/projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t2k-w0.5.mod(21):  Reading nostruct-align/1auwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t2k-w0.5.mod (nostruct-align/1auwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.677893
/projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t2k-w0.5.mod(22):  Reading nostruct-align/1c3wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12454/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t2k-w0.5.mod (nostruct-align/1c3wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.228886
/projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t2k-w0.5.mod(21):  Reading nostruct-align/1pvxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16400/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t2k-w0.5.mod (nostruct-align/1pvxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.249866
/projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k-w0.5.mod(21):  Reading nostruct-align/1bio.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-15451/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k-w0.5.mod (nostruct-align/1bio.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.754864
/projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t2k-w0.5.mod(21):  Reading nostruct-align/1bip.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-7810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t2k-w0.5.mod (nostruct-align/1bip.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.381872
/projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t2k-w0.5.mod(21):  Reading nostruct-align/1bk0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t2k-w0.5.mod (nostruct-align/1bk0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.241856
/projects/compbio/experiments/models.97/pdb/1b/1bk1/nostruct-align/1bk1.t2k-w0.5.mod(21):  Reading nostruct-align/1bk1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-31690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bk1/nostruct-align/1bk1.t2k-w0.5.mod (nostruct-align/1bk1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bk1/nostruct-align/1bk1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.198896
/projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t2k-w0.5.mod(21):  Reading nostruct-align/1larA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t2k-w0.5.mod (nostruct-align/1larA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.821854
/projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-w0.5.mod(22):  Reading nostruct-align/3eipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29289/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-w0.5.mod (nostruct-align/3eipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.962872
/projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t2k-w0.5.mod(21):  Reading nostruct-align/1nozA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-5164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t2k-w0.5.mod (nostruct-align/1nozA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.059885
/projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t2k-w0.5.mod(21):  Reading nostruct-align/1bix.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-24945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t2k-w0.5.mod (nostruct-align/1bix.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.647879
/projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t2k-w0.5.mod(21):  Reading nostruct-align/1iso.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-32159/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t2k-w0.5.mod (nostruct-align/1iso.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.520880
/projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t2k-w0.5.mod(22):  Reading nostruct-align/1byfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t2k-w0.5.mod (nostruct-align/1byfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.208887
/projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t2k-w0.5.mod(21):  Reading nostruct-align/1agdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-22913/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t2k-w0.5.mod (nostruct-align/1agdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.282902
/projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t2k-w0.5.mod(21):  Reading nostruct-align/1agdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-9561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t2k-w0.5.mod (nostruct-align/1agdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.516865
/projects/compbio/experiments/models.97/pdb/1h/1h6pA/nostruct-align/1h6pA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10007/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6pA/nostruct-align/1h6pA.t2k-w0.5.mod (nostruct-align/1h6pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6pA/nostruct-align/1h6pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.031895
/projects/compbio/experiments/models.97/pdb/1j/1jy8A/nostruct-align/1jy8A.t2k-w0.5.mod(22):  Reading nostruct-align/1jy8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14092/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jy8A/nostruct-align/1jy8A.t2k-w0.5.mod (nostruct-align/1jy8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jy8A/nostruct-align/1jy8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.929863
/projects/compbio/experiments/models.97/pdb/1i/1iexA/nostruct-align/1iexA.t2k-w0.5.mod(22):  Reading nostruct-align/1iexA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-29822/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iexA/nostruct-align/1iexA.t2k-w0.5.mod (nostruct-align/1iexA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iexA/nostruct-align/1iexA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.701891
/projects/compbio/experiments/models.97/pdb/1c/1culA/nostruct-align/1culA.t2k-w0.5.mod(22):  Reading nostruct-align/1culA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1culA/nostruct-align/1culA.t2k-w0.5.mod (nostruct-align/1culA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1culA/nostruct-align/1culA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.650908
/projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t2k-w0.5.mod(21):  Reading nostruct-align/1tgoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t2k-w0.5.mod (nostruct-align/1tgoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.200878
/projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t2k-w0.5.mod(22):  Reading nostruct-align/1efnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27457/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t2k-w0.5.mod (nostruct-align/1efnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.861885
/projects/compbio/experiments/models.97/pdb/1i/1ig6A/nostruct-align/1ig6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ig6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig6A/nostruct-align/1ig6A.t2k-w0.5.mod (nostruct-align/1ig6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ig6A/nostruct-align/1ig6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.860867
/projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-w0.5.mod(22):  Reading nostruct-align/1gtvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21799/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-w0.5.mod (nostruct-align/1gtvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gtvA/nostruct-align/1gtvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.305853
/projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t2k-w0.5.mod(21):  Reading nostruct-align/1dqrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-24652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t2k-w0.5.mod (nostruct-align/1dqrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.039892
/projects/compbio/experiments/models.97/pdb/1e/1eo6A/nostruct-align/1eo6A.t2k-w0.5.mod(21):  Reading nostruct-align/1eo6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32465/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo6A/nostruct-align/1eo6A.t2k-w0.5.mod (nostruct-align/1eo6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eo6A/nostruct-align/1eo6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.206881
/projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t2k-w0.5.mod(21):  Reading nostruct-align/2mbr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6350/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t2k-w0.5.mod (nostruct-align/2mbr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.036892
/projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t2k-w0.5.mod(21):  Reading nostruct-align/4enl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t2k-w0.5.mod (nostruct-align/4enl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.156885
/projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t2k-w0.5.mod(21):  Reading nostruct-align/1qm3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6442/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t2k-w0.5.mod (nostruct-align/1qm3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.561884
/projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t2k-w0.5.mod(22):  Reading nostruct-align/1cfzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t2k-w0.5.mod (nostruct-align/1cfzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.818911
/projects/compbio/experiments/models.97/pdb/1e/1euaA/nostruct-align/1euaA.t2k-w0.5.mod(22):  Reading nostruct-align/1euaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7760/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euaA/nostruct-align/1euaA.t2k-w0.5.mod (nostruct-align/1euaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1euaA/nostruct-align/1euaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.704880
/projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t2k-w0.5.mod(21):  Reading nostruct-align/1itf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-1638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t2k-w0.5.mod (nostruct-align/1itf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.979910
/projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t2k-w0.5.mod(21):  Reading nostruct-align/1itg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t2k-w0.5.mod (nostruct-align/1itg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.123905
/projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t2k-w0.5.mod(22):  Reading nostruct-align/3prn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18457/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t2k-w0.5.mod (nostruct-align/3prn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.452873
/projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t2k-w0.5.mod(21):  Reading nostruct-align/1bl1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t2k-w0.5.mod (nostruct-align/1bl1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.943863
/projects/compbio/experiments/models.97/pdb/1f/1fqgA/nostruct-align/1fqgA.t2k-w0.5.mod(21):  Reading nostruct-align/1fqgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqgA/nostruct-align/1fqgA.t2k-w0.5.mod (nostruct-align/1fqgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqgA/nostruct-align/1fqgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.752878
/projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t2k-w0.5.mod(22):  Reading nostruct-align/1bjt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13300/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t2k-w0.5.mod (nostruct-align/1bjt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.106871
/projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t2k-w0.5.mod(21):  Reading nostruct-align/2ezh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-16742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t2k-w0.5.mod (nostruct-align/2ezh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.441874
/projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t2k-w0.5.mod(21):  Reading nostruct-align/2ezi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t2k-w0.5.mod (nostruct-align/2ezi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.058891
/projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t2k-w0.5.mod(21):  Reading nostruct-align/1itm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-16018/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t2k-w0.5.mod (nostruct-align/1itm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.261909
/projects/compbio/experiments/models.97/pdb/1g/1gmmA/nostruct-align/1gmmA.t2k-w0.5.mod(22):  Reading nostruct-align/1gmmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-23493/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmmA/nostruct-align/1gmmA.t2k-w0.5.mod (nostruct-align/1gmmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gmmA/nostruct-align/1gmmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.904882
/projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t2k-w0.5.mod(21):  Reading nostruct-align/2ezk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t2k-w0.5.mod (nostruct-align/2ezk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.938854
/projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t2k-w0.5.mod(21):  Reading nostruct-align/1bjx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16435/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t2k-w0.5.mod (nostruct-align/1bjx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.519878
/projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t2k-w0.5.mod(21):  Reading nostruct-align/2ezl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-11745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t2k-w0.5.mod (nostruct-align/2ezl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.136894
/projects/compbio/experiments/models.97/pdb/1f/1fxqA/nostruct-align/1fxqA.t2k-w0.5.mod(22):  Reading nostruct-align/1fxqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxqA/nostruct-align/1fxqA.t2k-w0.5.mod (nostruct-align/1fxqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxqA/nostruct-align/1fxqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.728865
/projects/compbio/experiments/models.97/pdb/1h/1h6qA/nostruct-align/1h6qA.t2k-w0.5.mod(21):  Reading nostruct-align/1h6qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-2304/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6qA/nostruct-align/1h6qA.t2k-w0.5.mod (nostruct-align/1h6qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6qA/nostruct-align/1h6qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.516895
/projects/compbio/experiments/models.97/pdb/7t/7timA/nostruct-align/7timA.t2k-w0.5.mod(21):  Reading nostruct-align/7timA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-11553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7t/7timA/nostruct-align/7timA.t2k-w0.5.mod (nostruct-align/7timA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7t/7timA/nostruct-align/7timA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.516905
/projects/compbio/experiments/models.97/pdb/1e/1e3mA/nostruct-align/1e3mA.t2k-w0.5.mod(22):  Reading nostruct-align/1e3mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2524/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3mA/nostruct-align/1e3mA.t2k-w0.5.mod (nostruct-align/1e3mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3mA/nostruct-align/1e3mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.482885
/projects/compbio/experiments/models.97/pdb/1i/1i45A/nostruct-align/1i45A.t2k-w0.5.mod(22):  Reading nostruct-align/1i45A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17338/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i45A/nostruct-align/1i45A.t2k-w0.5.mod (nostruct-align/1i45A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i45A/nostruct-align/1i45A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.310863
/projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t2k-w0.5.mod(21):  Reading nostruct-align/3monB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18099/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t2k-w0.5.mod (nostruct-align/3monB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.726883
/projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t2k-w0.5.mod(21):  Reading nostruct-align/1qdlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15469/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t2k-w0.5.mod (nostruct-align/1qdlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.748873
/projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k-w0.5.mod(21):  Reading nostruct-align/1fd3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-4635/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k-w0.5.mod (nostruct-align/1fd3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fd3A/nostruct-align/1fd3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.485878
/projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t2k-w0.5.mod(21):  Reading nostruct-align/1qdlB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1238/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t2k-w0.5.mod (nostruct-align/1qdlB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.279881
/projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-896/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t2k-w0.5.mod (nostruct-align/1dqsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.740864
/projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ds1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-10432/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-w0.5.mod (nostruct-align/1ds1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ds1A/nostruct-align/1ds1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.743906
/projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-w0.5.mod(22):  Reading nostruct-align/2mcm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-4428/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-w0.5.mod (nostruct-align/2mcm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.860865
/projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k-w0.5.mod(22):  Reading nostruct-align/1bkb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12502/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k-w0.5.mod (nostruct-align/1bkb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.700880
/projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-w0.5.mod(22):  Reading nostruct-align/1bkf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31628/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-w0.5.mod (nostruct-align/1bkf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.394878
/projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t2k-w0.5.mod(21):  Reading nostruct-align/1imbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9824/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t2k-w0.5.mod (nostruct-align/1imbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.548883
/projects/compbio/experiments/models.97/pdb/1b/1bl3A/nostruct-align/1bl3A.t2k-w0.5.mod(21):  Reading nostruct-align/1bl3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl3A/nostruct-align/1bl3A.t2k-w0.5.mod (nostruct-align/1bl3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bl3A/nostruct-align/1bl3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.046888
/projects/compbio/experiments/models.97/pdb/3p/3psg/nostruct-align/3psg.t2k-w0.5.mod(21):  Reading nostruct-align/3psg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-30148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3psg/nostruct-align/3psg.t2k-w0.5.mod (nostruct-align/3psg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3psg/nostruct-align/3psg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.451908
/projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t2k-w0.5.mod(21):  Reading nostruct-align/1b91A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-22104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t2k-w0.5.mod (nostruct-align/1b91A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.526871
/projects/compbio/experiments/models.97/pdb/1q/1qm4A/nostruct-align/1qm4A.t2k-w0.5.mod(22):  Reading nostruct-align/1qm4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32188/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm4A/nostruct-align/1qm4A.t2k-w0.5.mod (nostruct-align/1qm4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qm4A/nostruct-align/1qm4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.903870
/projects/compbio/experiments/models.97/pdb/1j/1jihA/nostruct-align/1jihA.t2k-w0.5.mod(22):  Reading nostruct-align/1jihA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-7306/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jihA/nostruct-align/1jihA.t2k-w0.5.mod (nostruct-align/1jihA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jihA/nostruct-align/1jihA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.211895
/projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t2k-w0.5.mod(22):  Reading nostruct-align/1aw7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t2k-w0.5.mod (nostruct-align/1aw7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.082907
/projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t2k-w0.5.mod(21):  Reading nostruct-align/1auyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-21675/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t2k-w0.5.mod (nostruct-align/1auyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.955900
/projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t2k-w0.5.mod(21):  Reading nostruct-align/1c3yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18788/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t2k-w0.5.mod (nostruct-align/1c3yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.953897
/projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t2k-w0.5.mod(21):  Reading nostruct-align/1latA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-28185/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t2k-w0.5.mod (nostruct-align/1latA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.459888
/projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t2k-w0.5.mod(21):  Reading nostruct-align/1bku.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t2k-w0.5.mod (nostruct-align/1bku.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.656851
/projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-w0.5.mod(22):  Reading nostruct-align/1bm8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6812/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-w0.5.mod (nostruct-align/1bm8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.646872
/projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t2k-w0.5.mod(22):  Reading nostruct-align/1fxrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29316/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t2k-w0.5.mod (nostruct-align/1fxrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.649874
/projects/compbio/experiments/models.97/pdb/1h/1h6rA/nostruct-align/1h6rA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-14324/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6rA/nostruct-align/1h6rA.t2k-w0.5.mod (nostruct-align/1h6rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6rA/nostruct-align/1h6rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.557869
/projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-w0.5.mod(22):  Reading nostruct-align/1h80A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-w0.5.mod (nostruct-align/1h80A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h80A/nostruct-align/1h80A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.893898
/projects/compbio/experiments/models.97/pdb/1k/1k9vF/nostruct-align/1k9vF.t2k-w0.5.mod(22):  Reading nostruct-align/1k9vF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15305/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k9vF/nostruct-align/1k9vF.t2k-w0.5.mod (nostruct-align/1k9vF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k9vF/nostruct-align/1k9vF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.537886
/projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t2k-w0.5.mod(21):  Reading nostruct-align/1cunA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-7702/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t2k-w0.5.mod (nostruct-align/1cunA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.833908
/projects/compbio/experiments/models.97/pdb/1i/1ig8A/nostruct-align/1ig8A.t2k-w0.5.mod(21):  Reading nostruct-align/1ig8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14382/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ig8A/nostruct-align/1ig8A.t2k-w0.5.mod (nostruct-align/1ig8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ig8A/nostruct-align/1ig8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.192892
/projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t2k-w0.5.mod(21):  Reading nostruct-align/1gtxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6793/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t2k-w0.5.mod (nostruct-align/1gtxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.672901
/projects/compbio/experiments/models.97/pdb/1d/1dqtA/nostruct-align/1dqtA.t2k-w0.5.mod(21):  Reading nostruct-align/1dqtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3138/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqtA/nostruct-align/1dqtA.t2k-w0.5.mod (nostruct-align/1dqtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqtA/nostruct-align/1dqtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.755911
/projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t2k-w0.5.mod(21):  Reading nostruct-align/1iuz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24063/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t2k-w0.5.mod (nostruct-align/1iuz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.664875
/projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t2k-w0.5.mod(22):  Reading nostruct-align/1ble.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-19750/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t2k-w0.5.mod (nostruct-align/1ble.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.300856
/projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t2k-w0.5.mod(21):  Reading nostruct-align/3pte.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-22304/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t2k-w0.5.mod (nostruct-align/3pte.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.304895
/projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t2k-w0.5.mod(21):  Reading nostruct-align/1bli.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-19175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t2k-w0.5.mod (nostruct-align/1bli.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.876873
/projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t2k-w0.5.mod(21):  Reading nostruct-align/1iva.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-11859/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t2k-w0.5.mod (nostruct-align/1iva.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.131870
/projects/compbio/experiments/models.97/pdb/1a/1aw8A/nostruct-align/1aw8A.t2k-w0.5.mod(22):  Reading nostruct-align/1aw8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-4504/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw8A/nostruct-align/1aw8A.t2k-w0.5.mod (nostruct-align/1aw8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw8A/nostruct-align/1aw8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.305882
/projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t2k-w0.5.mod(22):  Reading nostruct-align/1aw8B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-27774/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t2k-w0.5.mod (nostruct-align/1aw8B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.273870
/projects/compbio/experiments/models.97/pdb/1i/1ivg/nostruct-align/1ivg.t2k-w0.5.mod(22):  Reading nostruct-align/1ivg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1349/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ivg/nostruct-align/1ivg.t2k-w0.5.mod (nostruct-align/1ivg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ivg/nostruct-align/1ivg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.443869
/projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t2k-w0.5.mod(21):  Reading nostruct-align/1tvdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-3821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t2k-w0.5.mod (nostruct-align/1tvdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.995901
/projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t2k-w0.5.mod(21):  Reading nostruct-align/1aw8E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10847/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t2k-w0.5.mod (nostruct-align/1aw8E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.898891
/projects/compbio/experiments/models.97/pdb/1h/1hbkA/nostruct-align/1hbkA.t2k-w0.5.mod(22):  Reading nostruct-align/1hbkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-15561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbkA/nostruct-align/1hbkA.t2k-w0.5.mod (nostruct-align/1hbkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbkA/nostruct-align/1hbkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.344898
/projects/compbio/experiments/models.97/pdb/1f/1fqiA/nostruct-align/1fqiA.t2k-w0.5.mod(22):  Reading nostruct-align/1fqiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-31181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqiA/nostruct-align/1fqiA.t2k-w0.5.mod (nostruct-align/1fqiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqiA/nostruct-align/1fqiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.885893
/projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t2k-w0.5.mod(21):  Reading nostruct-align/3il8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t2k-w0.5.mod (nostruct-align/3il8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.590904
/projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t2k-w0.5.mod(21):  Reading nostruct-align/1zfpE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t2k-w0.5.mod (nostruct-align/1zfpE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.547869
/projects/compbio/experiments/models.97/pdb/1b/1blu/nostruct-align/1blu.t2k-w0.5.mod(21):  Reading nostruct-align/1blu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-31742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1blu/nostruct-align/1blu.t2k-w0.5.mod (nostruct-align/1blu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1blu/nostruct-align/1blu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.532888
/projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t2k-w0.5.mod(21):  Reading nostruct-align/1bn5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t2k-w0.5.mod (nostruct-align/1bn5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.793875
/projects/compbio/experiments/models.97/pdb/1c/1cuoA/nostruct-align/1cuoA.t2k-w0.5.mod(21):  Reading nostruct-align/1cuoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cuoA/nostruct-align/1cuoA.t2k-w0.5.mod (nostruct-align/1cuoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cuoA/nostruct-align/1cuoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.015850
/projects/compbio/experiments/models.97/pdb/1e/1e3oC/nostruct-align/1e3oC.t2k-w0.5.mod(21):  Reading nostruct-align/1e3oC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3oC/nostruct-align/1e3oC.t2k-w0.5.mod (nostruct-align/1e3oC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3oC/nostruct-align/1e3oC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.453892
/projects/compbio/experiments/models.97/pdb/1k/1ktbA/nostruct-align/1ktbA.t2k-w0.5.mod(22):  Reading nostruct-align/1ktbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3999/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktbA/nostruct-align/1ktbA.t2k-w0.5.mod (nostruct-align/1ktbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ktbA/nostruct-align/1ktbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.257879
/projects/compbio/experiments/models.97/pdb/1d/1dquA/nostruct-align/1dquA.t2k-w0.5.mod(21):  Reading nostruct-align/1dquA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1555/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dquA/nostruct-align/1dquA.t2k-w0.5.mod (nostruct-align/1dquA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dquA/nostruct-align/1dquA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.465860
/projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t2k-w0.5.mod(21):  Reading nostruct-align/1f13A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-7562/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t2k-w0.5.mod (nostruct-align/1f13A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.422871
/projects/compbio/experiments/models.97/pdb/1s/1srvA/nostruct-align/1srvA.t2k-w0.5.mod(21):  Reading nostruct-align/1srvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22206/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1srvA/nostruct-align/1srvA.t2k-w0.5.mod (nostruct-align/1srvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1srvA/nostruct-align/1srvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.826889
/projects/compbio/experiments/models.97/pdb/1e/1eo9A/nostruct-align/1eo9A.t2k-w0.5.mod(21):  Reading nostruct-align/1eo9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26077/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo9A/nostruct-align/1eo9A.t2k-w0.5.mod (nostruct-align/1eo9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eo9A/nostruct-align/1eo9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.756882
/projects/compbio/experiments/models.97/pdb/1e/1eo9B/nostruct-align/1eo9B.t2k-w0.5.mod(21):  Reading nostruct-align/1eo9B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30820/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eo9B/nostruct-align/1eo9B.t2k-w0.5.mod (nostruct-align/1eo9B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eo9B/nostruct-align/1eo9B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.747879
/projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t2k-w0.5.mod(21):  Reading nostruct-align/1imdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-8363/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t2k-w0.5.mod (nostruct-align/1imdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.318895
/projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t2k-w0.5.mod(22):  Reading nostruct-align/1bjwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t2k-w0.5.mod (nostruct-align/1bjwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.732887
/projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t2k-w0.5.mod(21):  Reading nostruct-align/2ms2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-4879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t2k-w0.5.mod (nostruct-align/2ms2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.948898
/projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t2k-w0.5.mod(22):  Reading nostruct-align/1b93A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-27951/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t2k-w0.5.mod (nostruct-align/1b93A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.342854
/projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t2k-w0.5.mod(21):  Reading nostruct-align/1b93B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19455/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t2k-w0.5.mod (nostruct-align/1b93B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.227865
/projects/compbio/experiments/models.97/pdb/2r/2rmcA/nostruct-align/2rmcA.t2k-w0.5.mod(21):  Reading nostruct-align/2rmcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rmcA/nostruct-align/2rmcA.t2k-w0.5.mod (nostruct-align/2rmcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rmcA/nostruct-align/2rmcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.886854
/projects/compbio/experiments/models.97/pdb/1k/1kepA/nostruct-align/1kepA.t2k-w0.5.mod(22):  Reading nostruct-align/1kepA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4695/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kepA/nostruct-align/1kepA.t2k-w0.5.mod (nostruct-align/1kepA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kepA/nostruct-align/1kepA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.828863
/projects/compbio/experiments/models.97/pdb/1e/1eudA/nostruct-align/1eudA.t2k-w0.5.mod(22):  Reading nostruct-align/1eudA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eudA/nostruct-align/1eudA.t2k-w0.5.mod (nostruct-align/1eudA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eudA/nostruct-align/1eudA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.963860
/projects/compbio/experiments/models.97/pdb/1b/1bmp/nostruct-align/1bmp.t2k-w0.5.mod(21):  Reading nostruct-align/1bmp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-6039/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmp/nostruct-align/1bmp.t2k-w0.5.mod (nostruct-align/1bmp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmp/nostruct-align/1bmp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.820875
/projects/compbio/experiments/models.97/pdb/1e/1eudB/nostruct-align/1eudB.t2k-w0.5.mod(22):  Reading nostruct-align/1eudB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-8557/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eudB/nostruct-align/1eudB.t2k-w0.5.mod (nostruct-align/1eudB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eudB/nostruct-align/1eudB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.172863
/projects/compbio/experiments/models.97/pdb/1b/1bmr/nostruct-align/1bmr.t2k-w0.5.mod(21):  Reading nostruct-align/1bmr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30173/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmr/nostruct-align/1bmr.t2k-w0.5.mod (nostruct-align/1bmr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmr/nostruct-align/1bmr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.139898
/projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-w0.5.mod(22):  Reading nostruct-align/1qsaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-21870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-w0.5.mod (nostruct-align/1qsaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.570881
/projects/compbio/experiments/models.97/pdb/1f/1fqjC/nostruct-align/1fqjC.t2k-w0.5.mod(22):  Reading nostruct-align/1fqjC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2120/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqjC/nostruct-align/1fqjC.t2k-w0.5.mod (nostruct-align/1fqjC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqjC/nostruct-align/1fqjC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.781878
/projects/compbio/experiments/models.97/pdb/1j/1jr2A/nostruct-align/1jr2A.t2k-w0.5.mod(22):  Reading nostruct-align/1jr2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13847/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr2A/nostruct-align/1jr2A.t2k-w0.5.mod (nostruct-align/1jr2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jr2A/nostruct-align/1jr2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.030882
/projects/compbio/experiments/models.97/pdb/1j/1jqSB/nostruct-align/1jqSB.t2k-w0.5.mod(21):  Reading nostruct-align/1jqSB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-30094/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqSB/nostruct-align/1jqSB.t2k-w0.5.mod (nostruct-align/1jqSB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jqSB/nostruct-align/1jqSB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.652874
/projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t2k-w0.5.mod(21):  Reading nostruct-align/1gmpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-23324/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t2k-w0.5.mod (nostruct-align/1gmpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.238880
/projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t2k-w0.5.mod(21):  Reading nostruct-align/3bbg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t2k-w0.5.mod (nostruct-align/3bbg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.451880
/projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t2k-w0.5.mod(21):  Reading nostruct-align/1bmx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t2k-w0.5.mod (nostruct-align/1bmx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.606892
/projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t2k-w0.5.mod(21):  Reading nostruct-align/2dorA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t2k-w0.5.mod (nostruct-align/2dorA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.032869
/projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k-w0.5.mod (nostruct-align/1h6tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6tA/nostruct-align/1h6tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -40.339901
/projects/compbio/experiments/models.97/pdb/1e/1e3pA/nostruct-align/1e3pA.t2k-w0.5.mod(21):  Reading nostruct-align/1e3pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-26146/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3pA/nostruct-align/1e3pA.t2k-w0.5.mod (nostruct-align/1e3pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3pA/nostruct-align/1e3pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.582870
/projects/compbio/experiments/models.97/pdb/1d/1ds4A/nostruct-align/1ds4A.t2k-w0.5.mod(22):  Reading nostruct-align/1ds4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30654/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds4A/nostruct-align/1ds4A.t2k-w0.5.mod (nostruct-align/1ds4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ds4A/nostruct-align/1ds4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.555859
/projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t2k-w0.5.mod(21):  Reading nostruct-align/1bnb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25844/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t2k-w0.5.mod (nostruct-align/1bnb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.432852
/projects/compbio/experiments/models.97/pdb/1u/1ucyE/nostruct-align/1ucyE.t2k-w0.5.mod(21):  Reading nostruct-align/1ucyE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-30224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ucyE/nostruct-align/1ucyE.t2k-w0.5.mod (nostruct-align/1ucyE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ucyE/nostruct-align/1ucyE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.611879
/projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-w0.5.mod(21):  Reading nostruct-align/1tgsI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27477/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-w0.5.mod (nostruct-align/1tgsI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.932865
/projects/compbio/experiments/models.97/pdb/1u/1ucyH/nostruct-align/1ucyH.t2k-w0.5.mod(21):  Reading nostruct-align/1ucyH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-29313/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ucyH/nostruct-align/1ucyH.t2k-w0.5.mod (nostruct-align/1ucyH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ucyH/nostruct-align/1ucyH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.111862
/projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t2k-w0.5.mod(22):  Reading nostruct-align/1xjo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t2k-w0.5.mod (nostruct-align/1xjo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.726904
/projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t2k-w0.5.mod(21):  Reading nostruct-align/1ixa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-3739/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t2k-w0.5.mod (nostruct-align/1ixa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.974901
/projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-w0.5.mod(22):  Reading nostruct-align/1hxiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5785/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-w0.5.mod (nostruct-align/1hxiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxiA/nostruct-align/1hxiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.823902
/projects/compbio/experiments/models.97/pdb/1b/1bno/nostruct-align/1bno.t2k-w0.5.mod(21):  Reading nostruct-align/1bno.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-30594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bno/nostruct-align/1bno.t2k-w0.5.mod (nostruct-align/1bno.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bno/nostruct-align/1bno.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.786880
/projects/compbio/experiments/models.97/pdb/1e/1eueA/nostruct-align/1eueA.t2k-w0.5.mod(21):  Reading nostruct-align/1eueA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eueA/nostruct-align/1eueA.t2k-w0.5.mod (nostruct-align/1eueA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eueA/nostruct-align/1eueA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.056875
/projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-w0.5.mod(22):  Reading nostruct-align/1ixh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14486/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-w0.5.mod (nostruct-align/1ixh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.796871
/projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t2k-w0.5.mod(21):  Reading nostruct-align/2hgsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3583/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t2k-w0.5.mod (nostruct-align/2hgsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.598864
/projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t2k-w0.5.mod(21):  Reading nostruct-align/1bp1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t2k-w0.5.mod (nostruct-align/1bp1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.856861
/projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t2k-w0.5.mod(21):  Reading nostruct-align/1d0aB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-10409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t2k-w0.5.mod (nostruct-align/1d0aB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.624863
/projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t2k-w0.5.mod(21):  Reading nostruct-align/1nal1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13163/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t2k-w0.5.mod (nostruct-align/1nal1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.995859
/projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t2k-w0.5.mod(21):  Reading nostruct-align/1nal3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19422/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t2k-w0.5.mod (nostruct-align/1nal3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.001858
/projects/compbio/experiments/models.97/pdb/1j/1jr3E/nostruct-align/1jr3E.t2k-w0.5.mod(22):  Reading nostruct-align/1jr3E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-14455/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr3E/nostruct-align/1jr3E.t2k-w0.5.mod (nostruct-align/1jr3E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jr3E/nostruct-align/1jr3E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.913870
/projects/compbio/experiments/models.97/pdb/1d/1d7kA/nostruct-align/1d7kA.t2k-w0.5.mod(22):  Reading nostruct-align/1d7kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8710/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7kA/nostruct-align/1d7kA.t2k-w0.5.mod (nostruct-align/1d7kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7kA/nostruct-align/1d7kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.910879
/projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t2k-w0.5.mod(22):  Reading nostruct-align/1bykA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23073/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t2k-w0.5.mod (nostruct-align/1bykA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.116892
/projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t2k-w0.5.mod(21):  Reading nostruct-align/1hiwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9958/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t2k-w0.5.mod (nostruct-align/1hiwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.276867
/projects/compbio/experiments/models.97/pdb/1h/1h6uA/nostruct-align/1h6uA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2944/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6uA/nostruct-align/1h6uA.t2k-w0.5.mod (nostruct-align/1h6uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6uA/nostruct-align/1h6uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -40.475849
/projects/compbio/experiments/models.97/pdb/1i/1i49A/nostruct-align/1i49A.t2k-w0.5.mod(21):  Reading nostruct-align/1i49A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-3747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i49A/nostruct-align/1i49A.t2k-w0.5.mod (nostruct-align/1i49A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i49A/nostruct-align/1i49A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.567884
/projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t2k-w0.5.mod (nostruct-align/1dqwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.372877
/projects/compbio/experiments/models.97/pdb/1f/1f15A/nostruct-align/1f15A.t2k-w0.5.mod(21):  Reading nostruct-align/1f15A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-26084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f15A/nostruct-align/1f15A.t2k-w0.5.mod (nostruct-align/1f15A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f15A/nostruct-align/1f15A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.248888
/projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t2k-w0.5.mod(21):  Reading nostruct-align/1bob.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-26000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t2k-w0.5.mod (nostruct-align/1bob.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.908867
/projects/compbio/experiments/models.97/pdb/1f/1f15B/nostruct-align/1f15B.t2k-w0.5.mod(21):  Reading nostruct-align/1f15B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-30722/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f15B/nostruct-align/1f15B.t2k-w0.5.mod (nostruct-align/1f15B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f15B/nostruct-align/1f15B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.219864
/projects/compbio/experiments/models.97/pdb/1j/1jbbA/nostruct-align/1jbbA.t2k-w0.5.mod(21):  Reading nostruct-align/1jbbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbbA/nostruct-align/1jbbA.t2k-w0.5.mod (nostruct-align/1jbbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jbbA/nostruct-align/1jbbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.412891
/projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t2k-w0.5.mod(21):  Reading nostruct-align/1k89.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15687/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t2k-w0.5.mod (nostruct-align/1k89.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.071884
/projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t2k-w0.5.mod(22):  Reading nostruct-align/3bct.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t2k-w0.5.mod (nostruct-align/3bct.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.023893
/projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t2k-w0.5.mod(22):  Reading nostruct-align/1sknP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t2k-w0.5.mod (nostruct-align/1sknP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.004906
/projects/compbio/experiments/models.97/pdb/1j/1jilA/nostruct-align/1jilA.t2k-w0.5.mod(22):  Reading nostruct-align/1jilA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-6269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jilA/nostruct-align/1jilA.t2k-w0.5.mod (nostruct-align/1jilA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jilA/nostruct-align/1jilA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.207905
/projects/compbio/experiments/models.97/pdb/1g/1g3fA/nostruct-align/1g3fA.t2k-w0.5.mod(21):  Reading nostruct-align/1g3fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4800/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3fA/nostruct-align/1g3fA.t2k-w0.5.mod (nostruct-align/1g3fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g3fA/nostruct-align/1g3fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.077875
/projects/compbio/experiments/models.97/pdb/1k/1kg0C/nostruct-align/1kg0C.t2k-w0.5.mod(22):  Reading nostruct-align/1kg0C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3129/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kg0C/nostruct-align/1kg0C.t2k-w0.5.mod (nostruct-align/1kg0C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kg0C/nostruct-align/1kg0C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.131899
/projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t2k-w0.5.mod(21):  Reading nostruct-align/2ts1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-27419/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t2k-w0.5.mod (nostruct-align/2ts1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.403889
/projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t2k-w0.5.mod(21):  Reading nostruct-align/1bor.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-25657/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t2k-w0.5.mod (nostruct-align/1bor.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.543884
/projects/compbio/experiments/models.97/pdb/1b/1bq0/nostruct-align/1bq0.t2k-w0.5.mod(21):  Reading nostruct-align/1bq0.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-12938/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bq0/nostruct-align/1bq0.t2k-w0.5.mod (nostruct-align/1bq0.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bq0/nostruct-align/1bq0.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.849867
/projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t2k-w0.5.mod(21):  Reading nostruct-align/1d0bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11677/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t2k-w0.5.mod (nostruct-align/1d0bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -41.745888
/projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-w0.5.mod(22):  Reading nostruct-align/1hbnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29729/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-w0.5.mod (nostruct-align/1hbnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbnA/nostruct-align/1hbnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.188866
/projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-w0.5.mod(22):  Reading nostruct-align/1hbnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-5259/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-w0.5.mod (nostruct-align/1hbnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbnB/nostruct-align/1hbnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.308851
/projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t2k-w0.5.mod(21):  Reading nostruct-align/1qba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29872/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t2k-w0.5.mod (nostruct-align/1qba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.579889
/projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-w0.5.mod(22):  Reading nostruct-align/1hbnC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-w0.5.mod (nostruct-align/1hbnC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbnC/nostruct-align/1hbnC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.233898
/projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t2k-w0.5.mod(21):  Reading nostruct-align/1boy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-21857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t2k-w0.5.mod (nostruct-align/1boy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.586855
/projects/compbio/experiments/models.97/pdb/1d/1djnA/nostruct-align/1djnA.t2k-w0.5.mod(21):  Reading nostruct-align/1djnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28171/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djnA/nostruct-align/1djnA.t2k-w0.5.mod (nostruct-align/1djnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1djnA/nostruct-align/1djnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.478867
/projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t2k-w0.5.mod(21):  Reading nostruct-align/1bylA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11639/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t2k-w0.5.mod (nostruct-align/1bylA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.842854
/projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-w0.5.mod(22):  Reading nostruct-align/1agjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22436/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-w0.5.mod (nostruct-align/1agjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.501902
/projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t2k-w0.5.mod(21):  Reading nostruct-align/1liaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2007/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t2k-w0.5.mod (nostruct-align/1liaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.327904
/projects/compbio/experiments/models.97/pdb/1c/1cw0A/nostruct-align/1cw0A.t2k-w0.5.mod(21):  Reading nostruct-align/1cw0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3300/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cw0A/nostruct-align/1cw0A.t2k-w0.5.mod (nostruct-align/1cw0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cw0A/nostruct-align/1cw0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.306896
/projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t2k-w0.5.mod(21):  Reading nostruct-align/1iyu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17449/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t2k-w0.5.mod (nostruct-align/1iyu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.990904
/projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t2k-w0.5.mod(22):  Reading nostruct-align/1bcpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t2k-w0.5.mod (nostruct-align/1bcpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.652906
/projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t2k-w0.5.mod(22):  Reading nostruct-align/1b0nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22921/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t2k-w0.5.mod (nostruct-align/1b0nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.752880
/projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t2k-w0.5.mod(22):  Reading nostruct-align/1bcpB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26445/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t2k-w0.5.mod (nostruct-align/1bcpB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.587893
/projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t2k-w0.5.mod(22):  Reading nostruct-align/1b0nB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18053/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t2k-w0.5.mod (nostruct-align/1b0nB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.463879
/projects/compbio/experiments/models.97/pdb/1f/1f16A/nostruct-align/1f16A.t2k-w0.5.mod(21):  Reading nostruct-align/1f16A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f16A/nostruct-align/1f16A.t2k-w0.5.mod (nostruct-align/1f16A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f16A/nostruct-align/1f16A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.922878
/projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t2k-w0.5.mod(22):  Reading nostruct-align/1bcpD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24885/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t2k-w0.5.mod (nostruct-align/1bcpD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.160906
/projects/compbio/experiments/models.97/pdb/1b/1bpb/nostruct-align/1bpb.t2k-w0.5.mod(21):  Reading nostruct-align/1bpb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10149/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpb/nostruct-align/1bpb.t2k-w0.5.mod (nostruct-align/1bpb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bpb/nostruct-align/1bpb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.455870
/projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t2k-w0.5.mod(21):  Reading nostruct-align/1ca4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-31455/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t2k-w0.5.mod (nostruct-align/1ca4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.771887
/projects/compbio/experiments/models.97/pdb/1d/1ds6B/nostruct-align/1ds6B.t2k-w0.5.mod(21):  Reading nostruct-align/1ds6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-5349/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds6B/nostruct-align/1ds6B.t2k-w0.5.mod (nostruct-align/1ds6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ds6B/nostruct-align/1ds6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.603865
/projects/compbio/experiments/models.97/pdb/1b/1bcpF/nostruct-align/1bcpF.t2k-w0.5.mod(22):  Reading nostruct-align/1bcpF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6052/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bcpF/nostruct-align/1bcpF.t2k-w0.5.mod (nostruct-align/1bcpF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bcpF/nostruct-align/1bcpF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.741911
/projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-w0.5.mod(21):  Reading nostruct-align/2mhr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-w0.5.mod (nostruct-align/2mhr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.096910
/projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t2k-w0.5.mod(21):  Reading nostruct-align/1bl8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-15268/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t2k-w0.5.mod (nostruct-align/1bl8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.563864
/projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t2k-w0.5.mod(21):  Reading nostruct-align/1bpi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4683/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t2k-w0.5.mod (nostruct-align/1bpi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.459911
/projects/compbio/experiments/models.97/pdb/2m/2mhu/nostruct-align/2mhu.t2k-w0.5.mod(21):  Reading nostruct-align/2mhu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mhu/nostruct-align/2mhu.t2k-w0.5.mod (nostruct-align/2mhu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mhu/nostruct-align/2mhu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.927895
/projects/compbio/experiments/models.97/pdb/1q/1qm9A/nostruct-align/1qm9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qm9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2072/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qm9A/nostruct-align/1qm9A.t2k-w0.5.mod (nostruct-align/1qm9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qm9A/nostruct-align/1qm9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.134909
/projects/compbio/experiments/models.97/pdb/1f/1fjcA/nostruct-align/1fjcA.t2k-w0.5.mod(21):  Reading nostruct-align/1fjcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30581/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjcA/nostruct-align/1fjcA.t2k-w0.5.mod (nostruct-align/1fjcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjcA/nostruct-align/1fjcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.734909
/projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t2k-w0.5.mod(22):  Reading nostruct-align/1dceA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-9164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t2k-w0.5.mod (nostruct-align/1dceA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.406887
/projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t2k-w0.5.mod(22):  Reading nostruct-align/1dceB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t2k-w0.5.mod (nostruct-align/1dceB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.599861
/projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-w0.5.mod(22):  Reading nostruct-align/1d0cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-w0.5.mod (nostruct-align/1d0cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0cA/nostruct-align/1d0cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.934860
/projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t2k-w0.5.mod(22):  Reading nostruct-align/1qsdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t2k-w0.5.mod (nostruct-align/1qsdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.022900
/projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t2k-w0.5.mod(22):  Reading nostruct-align/1urnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24338/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t2k-w0.5.mod (nostruct-align/1urnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.748865
/projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t2k-w0.5.mod(21):  Reading nostruct-align/4tgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18444/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t2k-w0.5.mod (nostruct-align/4tgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.698906
/projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t2k-w0.5.mod(21):  Reading nostruct-align/1bpv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t2k-w0.5.mod (nostruct-align/1bpv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.563896
/projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t2k-w0.5.mod(21):  Reading nostruct-align/1pov1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t2k-w0.5.mod (nostruct-align/1pov1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.706888
/projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t2k-w0.5.mod(22):  Reading nostruct-align/1br9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6160/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t2k-w0.5.mod (nostruct-align/1br9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.090891
/projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t2k-w0.5.mod(22):  Reading nostruct-align/1d7mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23660/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t2k-w0.5.mod (nostruct-align/1d7mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.628902
/projects/compbio/experiments/models.97/pdb/1h/1h6wA/nostruct-align/1h6wA.t2k-w0.5.mod(22):  Reading nostruct-align/1h6wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h6wA/nostruct-align/1h6wA.t2k-w0.5.mod (nostruct-align/1h6wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h6wA/nostruct-align/1h6wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.075888
/projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-w0.5.mod(22):  Reading nostruct-align/1a4iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6744/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-w0.5.mod (nostruct-align/1a4iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.700890
/projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t2k-w0.5.mod(21):  Reading nostruct-align/1a4iB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-4107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t2k-w0.5.mod (nostruct-align/1a4iB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.700871
/projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t2k-w0.5.mod(21):  Reading nostruct-align/1efuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-10679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t2k-w0.5.mod (nostruct-align/1efuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.182850
/projects/compbio/experiments/models.97/pdb/1f/1fd9A/nostruct-align/1fd9A.t2k-w0.5.mod(21):  Reading nostruct-align/1fd9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fd9A/nostruct-align/1fd9A.t2k-w0.5.mod (nostruct-align/1fd9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fd9A/nostruct-align/1fd9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.352894
/projects/compbio/experiments/models.97/pdb/7c/7catA/nostruct-align/7catA.t2k-w0.5.mod(21):  Reading nostruct-align/7catA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-4285/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7c/7catA/nostruct-align/7catA.t2k-w0.5.mod (nostruct-align/7catA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7c/7catA/nostruct-align/7catA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.877884
/projects/compbio/experiments/models.97/pdb/1d/1dqyA/nostruct-align/1dqyA.t2k-w0.5.mod(21):  Reading nostruct-align/1dqyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28452/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqyA/nostruct-align/1dqyA.t2k-w0.5.mod (nostruct-align/1dqyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqyA/nostruct-align/1dqyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.105894
/projects/compbio/experiments/models.97/pdb/2d/2dabA/nostruct-align/2dabA.t2k-w0.5.mod(22):  Reading nostruct-align/2dabA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3256/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dabA/nostruct-align/2dabA.t2k-w0.5.mod (nostruct-align/2dabA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dabA/nostruct-align/2dabA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.051851
/projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t2k-w0.5.mod(21):  Reading nostruct-align/1bqg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t2k-w0.5.mod (nostruct-align/1bqg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.443895
/projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t2k-w0.5.mod(21):  Reading nostruct-align/1ospH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-30434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t2k-w0.5.mod (nostruct-align/1ospH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.591852
/projects/compbio/experiments/models.97/pdb/1b/1b7yA/nostruct-align/1b7yA.t2k-w0.5.mod(21):  Reading nostruct-align/1b7yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15786/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7yA/nostruct-align/1b7yA.t2k-w0.5.mod (nostruct-align/1b7yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b7yA/nostruct-align/1b7yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.385900
/projects/compbio/experiments/models.97/pdb/1b/1b7yB/nostruct-align/1b7yB.t2k-w0.5.mod(22):  Reading nostruct-align/1b7yB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-22505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b7yB/nostruct-align/1b7yB.t2k-w0.5.mod (nostruct-align/1b7yB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b7yB/nostruct-align/1b7yB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.171875
/projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k-w0.5.mod(21):  Reading nostruct-align/1bqk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9698/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k-w0.5.mod (nostruct-align/1bqk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.972881
/projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t2k-w0.5.mod(21):  Reading nostruct-align/1ospL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-19189/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t2k-w0.5.mod (nostruct-align/1ospL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.083908
/projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t2k-w0.5.mod(21):  Reading nostruct-align/1euhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-14241/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t2k-w0.5.mod (nostruct-align/1euhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.238878
/projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t2k-w0.5.mod(22):  Reading nostruct-align/1dcfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t2k-w0.5.mod (nostruct-align/1dcfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.677866
/projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t2k-w0.5.mod(22):  Reading nostruct-align/1ospO.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t2k-w0.5.mod (nostruct-align/1ospO.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.228865
/projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-w0.5.mod(22):  Reading nostruct-align/1d0dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23444/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-w0.5.mod (nostruct-align/1d0dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0dA/nostruct-align/1d0dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.651861
/projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t2k-w0.5.mod(22):  Reading nostruct-align/3pyp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22039/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t2k-w0.5.mod (nostruct-align/3pyp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.144882
/projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t2k-w0.5.mod(21):  Reading nostruct-align/1bqt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t2k-w0.5.mod (nostruct-align/1bqt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.263885
/projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t2k-w0.5.mod(22):  Reading nostruct-align/1uroA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5296/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t2k-w0.5.mod (nostruct-align/1uroA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.961885
/projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t2k-w0.5.mod(21):  Reading nostruct-align/1bqv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-21101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t2k-w0.5.mod (nostruct-align/1bqv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.435894
/projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t2k-w0.5.mod(22):  Reading nostruct-align/2bpa1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27603/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t2k-w0.5.mod (nostruct-align/2bpa1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.776905
/projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t2k-w0.5.mod(21):  Reading nostruct-align/1bqz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t2k-w0.5.mod (nostruct-align/1bqz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.849895
/projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t2k-w0.5.mod(21):  Reading nostruct-align/1olgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23784/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t2k-w0.5.mod (nostruct-align/1olgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.110861
/projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t2k-w0.5.mod(22):  Reading nostruct-align/2bpa2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t2k-w0.5.mod (nostruct-align/2bpa2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.704872
/projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t2k-w0.5.mod(21):  Reading nostruct-align/1bs9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-4571/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t2k-w0.5.mod (nostruct-align/1bs9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.354874
/projects/compbio/experiments/models.97/pdb/1b/1bynA/nostruct-align/1bynA.t2k-w0.5.mod(21):  Reading nostruct-align/1bynA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bynA/nostruct-align/1bynA.t2k-w0.5.mod (nostruct-align/1bynA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bynA/nostruct-align/1bynA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.586897
/projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t2k-w0.5.mod(22):  Reading nostruct-align/2bpa3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7799/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t2k-w0.5.mod (nostruct-align/2bpa3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.953859
/projects/compbio/experiments/models.97/pdb/1f/1fxxA/nostruct-align/1fxxA.t2k-w0.5.mod(22):  Reading nostruct-align/1fxxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxxA/nostruct-align/1fxxA.t2k-w0.5.mod (nostruct-align/1fxxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxxA/nostruct-align/1fxxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.013878
/projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t2k-w0.5.mod(22):  Reading nostruct-align/1xnb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6341/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t2k-w0.5.mod (nostruct-align/1xnb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.598867
/projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t2k-w0.5.mod(22):  Reading nostruct-align/1efvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30209/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t2k-w0.5.mod (nostruct-align/1efvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.240870
/projects/compbio/experiments/models.97/pdb/1e/1e52A/nostruct-align/1e52A.t2k-w0.5.mod(21):  Reading nostruct-align/1e52A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-23300/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e52A/nostruct-align/1e52A.t2k-w0.5.mod (nostruct-align/1e52A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e52A/nostruct-align/1e52A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.012865
/projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t2k-w0.5.mod(22):  Reading nostruct-align/1efvB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24798/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t2k-w0.5.mod (nostruct-align/1efvB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.947880
/projects/compbio/experiments/models.97/pdb/1b/1b0pA/nostruct-align/1b0pA.t2k-w0.5.mod(21):  Reading nostruct-align/1b0pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-4129/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0pA/nostruct-align/1b0pA.t2k-w0.5.mod (nostruct-align/1b0pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b0pA/nostruct-align/1b0pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.466875
/projects/compbio/experiments/models.97/pdb/1q/1qdp/nostruct-align/1qdp.t2k-w0.5.mod(21):  Reading nostruct-align/1qdp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9882/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qdp/nostruct-align/1qdp.t2k-w0.5.mod (nostruct-align/1qdp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qdp/nostruct-align/1qdp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.480860
/projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-w0.5.mod(22):  Reading nostruct-align/1dqzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10129/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-w0.5.mod (nostruct-align/1dqzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dqzA/nostruct-align/1dqzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.939901
/projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-w0.5.mod(22):  Reading nostruct-align/1jbeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-29113/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-w0.5.mod (nostruct-align/1jbeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jbeA/nostruct-align/1jbeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.017885
/projects/compbio/experiments/models.97/pdb/1h/1hqcA/nostruct-align/1hqcA.t2k-w0.5.mod(21):  Reading nostruct-align/1hqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-5921/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqcA/nostruct-align/1hqcA.t2k-w0.5.mod (nostruct-align/1hqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hqcA/nostruct-align/1hqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.307890
/projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t2k-w0.5.mod(21):  Reading nostruct-align/1brd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-21992/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t2k-w0.5.mod (nostruct-align/1brd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.557878
/projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t2k-w0.5.mod(22):  Reading nostruct-align/2fokA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-26644/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t2k-w0.5.mod (nostruct-align/2fokA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.226902
/projects/compbio/experiments/models.97/pdb/1f/1f7cA/nostruct-align/1f7cA.t2k-w0.5.mod(21):  Reading nostruct-align/1f7cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7cA/nostruct-align/1f7cA.t2k-w0.5.mod (nostruct-align/1f7cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f7cA/nostruct-align/1f7cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.707882
/projects/compbio/experiments/models.97/pdb/1h/1hxmA/nostruct-align/1hxmA.t2k-w0.5.mod(21):  Reading nostruct-align/1hxmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27659/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxmA/nostruct-align/1hxmA.t2k-w0.5.mod (nostruct-align/1hxmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxmA/nostruct-align/1hxmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.544901
/projects/compbio/experiments/models.97/pdb/1h/1hxmD/nostruct-align/1hxmD.t2k-w0.5.mod(21):  Reading nostruct-align/1hxmD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxmD/nostruct-align/1hxmD.t2k-w0.5.mod (nostruct-align/1hxmD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxmD/nostruct-align/1hxmD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.341864
/projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t2k-w0.5.mod(21):  Reading nostruct-align/1rvv1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-15848/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t2k-w0.5.mod (nostruct-align/1rvv1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.049881
/projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-w0.5.mod(21):  Reading nostruct-align/1brt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4348/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-w0.5.mod (nostruct-align/1brt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.116896
/projects/compbio/experiments/models.97/pdb/1j/1jpyA/nostruct-align/1jpyA.t2k-w0.5.mod(22):  Reading nostruct-align/1jpyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16556/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpyA/nostruct-align/1jpyA.t2k-w0.5.mod (nostruct-align/1jpyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jpyA/nostruct-align/1jpyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.333876
/projects/compbio/experiments/models.97/pdb/1j/1jr7A/nostruct-align/1jr7A.t2k-w0.5.mod(22):  Reading nostruct-align/1jr7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr7A/nostruct-align/1jr7A.t2k-w0.5.mod (nostruct-align/1jr7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jr7A/nostruct-align/1jr7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.440891
/projects/compbio/experiments/models.97/pdb/1j/1jpyB/nostruct-align/1jpyB.t2k-w0.5.mod(21):  Reading nostruct-align/1jpyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-30331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpyB/nostruct-align/1jpyB.t2k-w0.5.mod (nostruct-align/1jpyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jpyB/nostruct-align/1jpyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.239876
/projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-w0.5.mod(22):  Reading nostruct-align/1gmuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-w0.5.mod (nostruct-align/1gmuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gmuA/nostruct-align/1gmuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.547861
/projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t2k-w0.5.mod(21):  Reading nostruct-align/2fal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-24972/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t2k-w0.5.mod (nostruct-align/2fal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.290863
/projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t2k-w0.5.mod(22):  Reading nostruct-align/1brz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t2k-w0.5.mod (nostruct-align/1brz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.091909
/projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t2k-w0.5.mod(21):  Reading nostruct-align/1d7oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-5653/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t2k-w0.5.mod (nostruct-align/1d7oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.204878
/projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-w0.5.mod(22):  Reading nostruct-align/1go3E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10731/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-w0.5.mod (nostruct-align/1go3E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1go3E/nostruct-align/1go3E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.512897
/projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-w0.5.mod(22):  Reading nostruct-align/1go3F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21178/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-w0.5.mod (nostruct-align/1go3F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1go3F/nostruct-align/1go3F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.463905
/projects/compbio/experiments/models.97/pdb/7p/7pcy/nostruct-align/7pcy.t2k-w0.5.mod(21):  Reading nostruct-align/7pcy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-24996/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7p/7pcy/nostruct-align/7pcy.t2k-w0.5.mod (nostruct-align/7pcy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7p/7pcy/nostruct-align/7pcy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.717863
/projects/compbio/experiments/models.97/pdb/1a/1a4kA/nostruct-align/1a4kA.t2k-w0.5.mod(21):  Reading nostruct-align/1a4kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-16690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4kA/nostruct-align/1a4kA.t2k-w0.5.mod (nostruct-align/1a4kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4kA/nostruct-align/1a4kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.701872
/projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t2k-w0.5.mod(21):  Reading nostruct-align/1phnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-30851/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t2k-w0.5.mod (nostruct-align/1phnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.435873
/projects/compbio/experiments/models.97/pdb/1e/1e3uA/nostruct-align/1e3uA.t2k-w0.5.mod(21):  Reading nostruct-align/1e3uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e3uA/nostruct-align/1e3uA.t2k-w0.5.mod (nostruct-align/1e3uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e3uA/nostruct-align/1e3uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.991882
/projects/compbio/experiments/models.97/pdb/1e/1e53A/nostruct-align/1e53A.t2k-w0.5.mod(21):  Reading nostruct-align/1e53A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-10439/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e53A/nostruct-align/1e53A.t2k-w0.5.mod (nostruct-align/1e53A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e53A/nostruct-align/1e53A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.443901
/projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t2k-w0.5.mod(21):  Reading nostruct-align/1phnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t2k-w0.5.mod (nostruct-align/1phnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.617901
/projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k-w0.5.mod(21):  Reading nostruct-align/1tgxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1892/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k-w0.5.mod (nostruct-align/1tgxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.968882
/projects/compbio/experiments/models.97/pdb/2m/2mjpA/nostruct-align/2mjpA.t2k-w0.5.mod(22):  Reading nostruct-align/2mjpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mjpA/nostruct-align/2mjpA.t2k-w0.5.mod (nostruct-align/2mjpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mjpA/nostruct-align/2mjpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.888878
/projects/compbio/experiments/models.97/pdb/1r/1rvvA/nostruct-align/1rvvA.t2k-w0.5.mod(21):  Reading nostruct-align/1rvvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24015/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rvvA/nostruct-align/1rvvA.t2k-w0.5.mod (nostruct-align/1rvvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rvvA/nostruct-align/1rvvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.133856
/projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k-w0.5.mod(22):  Reading nostruct-align/1kthA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-27977/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k-w0.5.mod (nostruct-align/1kthA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kthA/nostruct-align/1kthA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.472883
/projects/compbio/experiments/models.97/pdb/1d/1ds9A/nostruct-align/1ds9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ds9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-32460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ds9A/nostruct-align/1ds9A.t2k-w0.5.mod (nostruct-align/1ds9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ds9A/nostruct-align/1ds9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -40.489861
/projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t2k-w0.5.mod(21):  Reading nostruct-align/1napA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-31052/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t2k-w0.5.mod (nostruct-align/1napA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.357885
/projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t2k-w0.5.mod(21):  Reading nostruct-align/1poxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-16292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t2k-w0.5.mod (nostruct-align/1poxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.758881
/projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k-w0.5.mod(22):  Reading nostruct-align/1toaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1545/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k-w0.5.mod (nostruct-align/1toaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.197891
/projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t2k-w0.5.mod(21):  Reading nostruct-align/1bsg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24077/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t2k-w0.5.mod (nostruct-align/1bsg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.668871
/projects/compbio/experiments/models.97/pdb/1j/1jipA/nostruct-align/1jipA.t2k-w0.5.mod(22):  Reading nostruct-align/1jipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13885/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jipA/nostruct-align/1jipA.t2k-w0.5.mod (nostruct-align/1jipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jipA/nostruct-align/1jipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.552898
/projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-w0.5.mod(21):  Reading nostruct-align/1f7dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12237/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-w0.5.mod (nostruct-align/1f7dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f7dA/nostruct-align/1f7dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.736870
/projects/compbio/experiments/models.97/pdb/1f/1fjfB/nostruct-align/1fjfB.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9955/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfB/nostruct-align/1fjfB.t2k-w0.5.mod (nostruct-align/1fjfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfB/nostruct-align/1fjfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.305902
/projects/compbio/experiments/models.97/pdb/1f/1fjfC/nostruct-align/1fjfC.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-14255/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfC/nostruct-align/1fjfC.t2k-w0.5.mod (nostruct-align/1fjfC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfC/nostruct-align/1fjfC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.668901
/projects/compbio/experiments/models.97/pdb/1e/1eujA/nostruct-align/1eujA.t2k-w0.5.mod(21):  Reading nostruct-align/1eujA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eujA/nostruct-align/1eujA.t2k-w0.5.mod (nostruct-align/1eujA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eujA/nostruct-align/1eujA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.400906
/projects/compbio/experiments/models.97/pdb/1g/1g3jA/nostruct-align/1g3jA.t2k-w0.5.mod(21):  Reading nostruct-align/1g3jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-2530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3jA/nostruct-align/1g3jA.t2k-w0.5.mod (nostruct-align/1g3jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g3jA/nostruct-align/1g3jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.514904
/projects/compbio/experiments/models.97/pdb/1k/1kevA/nostruct-align/1kevA.t2k-w0.5.mod(21):  Reading nostruct-align/1kevA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-25463/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kevA/nostruct-align/1kevA.t2k-w0.5.mod (nostruct-align/1kevA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kevA/nostruct-align/1kevA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.743912
/projects/compbio/experiments/models.97/pdb/1g/1g3jB/nostruct-align/1g3jB.t2k-w0.5.mod(21):  Reading nostruct-align/1g3jB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27031/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3jB/nostruct-align/1g3jB.t2k-w0.5.mod (nostruct-align/1g3jB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g3jB/nostruct-align/1g3jB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.021866
/projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t2k-w0.5.mod(21):  Reading nostruct-align/1dchA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-6297/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t2k-w0.5.mod (nostruct-align/1dchA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.557865
/projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t2k-w0.5.mod(21):  Reading nostruct-align/1brfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-28212/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t2k-w0.5.mod (nostruct-align/1brfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.064909
/projects/compbio/experiments/models.97/pdb/1f/1fjfI/nostruct-align/1fjfI.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4992/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfI/nostruct-align/1fjfI.t2k-w0.5.mod (nostruct-align/1fjfI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfI/nostruct-align/1fjfI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.999863
/projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-w0.5.mod(21):  Reading nostruct-align/1qsgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-w0.5.mod (nostruct-align/1qsgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qsgA/nostruct-align/1qsgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.247902
/projects/compbio/experiments/models.97/pdb/1f/1fjfJ/nostruct-align/1fjfJ.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfJ/nostruct-align/1fjfJ.t2k-w0.5.mod (nostruct-align/1fjfJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfJ/nostruct-align/1fjfJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.967878
/projects/compbio/experiments/models.97/pdb/1f/1fjfK/nostruct-align/1fjfK.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfK.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7087/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfK/nostruct-align/1fjfK.t2k-w0.5.mod (nostruct-align/1fjfK.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfK/nostruct-align/1fjfK.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.559879
/projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-w0.5.mod(22):  Reading nostruct-align/1jr8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13654/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-w0.5.mod (nostruct-align/1jr8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jr8A/nostruct-align/1jr8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.019899
/projects/compbio/experiments/models.97/pdb/2p/2pfkA/nostruct-align/2pfkA.t2k-w0.5.mod(22):  Reading nostruct-align/2pfkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-16084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pfkA/nostruct-align/2pfkA.t2k-w0.5.mod (nostruct-align/2pfkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pfkA/nostruct-align/2pfkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.112858
/projects/compbio/experiments/models.97/pdb/1f/1fjfL/nostruct-align/1fjfL.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22582/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfL/nostruct-align/1fjfL.t2k-w0.5.mod (nostruct-align/1fjfL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfL/nostruct-align/1fjfL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.984886
/projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-w0.5.mod(22):  Reading nostruct-align/1jpzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-17753/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-w0.5.mod (nostruct-align/1jpzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jpzA/nostruct-align/1jpzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.720900
/projects/compbio/experiments/models.97/pdb/1f/1fjfM/nostruct-align/1fjfM.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-10966/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfM/nostruct-align/1fjfM.t2k-w0.5.mod (nostruct-align/1fjfM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfM/nostruct-align/1fjfM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.467852
/projects/compbio/experiments/models.97/pdb/1f/1fjfN/nostruct-align/1fjfN.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-4858/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfN/nostruct-align/1fjfN.t2k-w0.5.mod (nostruct-align/1fjfN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfN/nostruct-align/1fjfN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.932873
/projects/compbio/experiments/models.97/pdb/1d/1dl0A/nostruct-align/1dl0A.t2k-w0.5.mod(21):  Reading nostruct-align/1dl0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-31577/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl0A/nostruct-align/1dl0A.t2k-w0.5.mod (nostruct-align/1dl0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dl0A/nostruct-align/1dl0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.595892
/projects/compbio/experiments/models.97/pdb/1f/1fjfQ/nostruct-align/1fjfQ.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfQ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2153/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfQ/nostruct-align/1fjfQ.t2k-w0.5.mod (nostruct-align/1fjfQ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfQ/nostruct-align/1fjfQ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.210878
/projects/compbio/experiments/models.97/pdb/1b/1bypA/nostruct-align/1bypA.t2k-w0.5.mod(21):  Reading nostruct-align/1bypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13695/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bypA/nostruct-align/1bypA.t2k-w0.5.mod (nostruct-align/1bypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bypA/nostruct-align/1bypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.037899
/projects/compbio/experiments/models.97/pdb/1f/1fjfR/nostruct-align/1fjfR.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28716/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfR/nostruct-align/1fjfR.t2k-w0.5.mod (nostruct-align/1fjfR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfR/nostruct-align/1fjfR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.969904
/projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t2k-w0.5.mod(21):  Reading nostruct-align/1xpa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20373/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t2k-w0.5.mod (nostruct-align/1xpa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.712900
/projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t2k-w0.5.mod(21):  Reading nostruct-align/1agnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-1941/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t2k-w0.5.mod (nostruct-align/1agnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.726906
/projects/compbio/experiments/models.97/pdb/1d/1djrD/nostruct-align/1djrD.t2k-w0.5.mod(21):  Reading nostruct-align/1djrD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djrD/nostruct-align/1djrD.t2k-w0.5.mod (nostruct-align/1djrD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1djrD/nostruct-align/1djrD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.175863
/projects/compbio/experiments/models.97/pdb/1f/1fjfT/nostruct-align/1fjfT.t2k-w0.5.mod(21):  Reading nostruct-align/1fjfT.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-3473/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjfT/nostruct-align/1fjfT.t2k-w0.5.mod (nostruct-align/1fjfT.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjfT/nostruct-align/1fjfT.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.636887
/projects/compbio/experiments/models.97/pdb/1f/1fxzA/nostruct-align/1fxzA.t2k-w0.5.mod(21):  Reading nostruct-align/1fxzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-12748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fxzA/nostruct-align/1fxzA.t2k-w0.5.mod (nostruct-align/1fxzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fxzA/nostruct-align/1fxzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.252876
/projects/compbio/experiments/models.97/pdb/1e/1e54A/nostruct-align/1e54A.t2k-w0.5.mod(22):  Reading nostruct-align/1e54A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31041/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e54A/nostruct-align/1e54A.t2k-w0.5.mod (nostruct-align/1e54A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e54A/nostruct-align/1e54A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.936892
/projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t2k-w0.5.mod(21):  Reading nostruct-align/1b20A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-23200/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t2k-w0.5.mod (nostruct-align/1b20A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.667908
/projects/compbio/experiments/models.97/pdb/1j/1jbgA/nostruct-align/1jbgA.t2k-w0.5.mod(22):  Reading nostruct-align/1jbgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbgA/nostruct-align/1jbgA.t2k-w0.5.mod (nostruct-align/1jbgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jbgA/nostruct-align/1jbgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.611908
/projects/compbio/experiments/models.97/pdb/1a/1anxA/nostruct-align/1anxA.t2k-w0.5.mod(22):  Reading nostruct-align/1anxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3063/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1anxA/nostruct-align/1anxA.t2k-w0.5.mod (nostruct-align/1anxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1anxA/nostruct-align/1anxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.043879
/projects/compbio/experiments/models.97/pdb/1a/1ap6A/nostruct-align/1ap6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ap6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ap6A/nostruct-align/1ap6A.t2k-w0.5.mod (nostruct-align/1ap6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ap6A/nostruct-align/1ap6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.047882
/projects/compbio/experiments/models.97/pdb/2m/2mlp/nostruct-align/2mlp.t2k-w0.5.mod(21):  Reading nostruct-align/2mlp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mlp/nostruct-align/2mlp.t2k-w0.5.mod (nostruct-align/2mlp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mlp/nostruct-align/2mlp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.363859
/projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-w0.5.mod(22):  Reading nostruct-align/1d7pM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-w0.5.mod (nostruct-align/1d7pM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7pM/nostruct-align/1d7pM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.249874
/projects/compbio/experiments/models.97/pdb/1f/1fjgB/nostruct-align/1fjgB.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgB/nostruct-align/1fjgB.t2k-w0.5.mod (nostruct-align/1fjgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgB/nostruct-align/1fjgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.201862
/projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t2k-w0.5.mod(21):  Reading nostruct-align/1btl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-12474/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t2k-w0.5.mod (nostruct-align/1btl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.503901
/projects/compbio/experiments/models.97/pdb/1f/1fjgC/nostruct-align/1fjgC.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgC/nostruct-align/1fjgC.t2k-w0.5.mod (nostruct-align/1fjgC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgC/nostruct-align/1fjgC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.398888
/projects/compbio/experiments/models.97/pdb/1f/1fjgD/nostruct-align/1fjgD.t2k-w0.5.mod(21):  Reading nostruct-align/1fjgD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-3801/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgD/nostruct-align/1fjgD.t2k-w0.5.mod (nostruct-align/1fjgD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgD/nostruct-align/1fjgD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.614872
/projects/compbio/experiments/models.97/pdb/1a/1avaA/nostruct-align/1avaA.t2k-w0.5.mod(21):  Reading nostruct-align/1avaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-26403/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avaA/nostruct-align/1avaA.t2k-w0.5.mod (nostruct-align/1avaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avaA/nostruct-align/1avaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.710892
/projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t2k-w0.5.mod(22):  Reading nostruct-align/1btn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t2k-w0.5.mod (nostruct-align/1btn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.109852
/projects/compbio/experiments/models.97/pdb/1k/1kewA/nostruct-align/1kewA.t2k-w0.5.mod(22):  Reading nostruct-align/1kewA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7525/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kewA/nostruct-align/1kewA.t2k-w0.5.mod (nostruct-align/1kewA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kewA/nostruct-align/1kewA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.334896
/projects/compbio/experiments/models.97/pdb/1g/1g3kA/nostruct-align/1g3kA.t2k-w0.5.mod(22):  Reading nostruct-align/1g3kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6833/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3kA/nostruct-align/1g3kA.t2k-w0.5.mod (nostruct-align/1g3kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g3kA/nostruct-align/1g3kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.674862
/projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t2k-w0.5.mod(21):  Reading nostruct-align/1avaC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10302/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t2k-w0.5.mod (nostruct-align/1avaC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.395863
/projects/compbio/experiments/models.97/pdb/1b/1btq/nostruct-align/1btq.t2k-w0.5.mod(21):  Reading nostruct-align/1btq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-25194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btq/nostruct-align/1btq.t2k-w0.5.mod (nostruct-align/1btq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1btq/nostruct-align/1btq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.094856
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Reading nostruct-align/1dciA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -36.795887
/projects/compbio/experiments/models.97/pdb/1f/1fjgI/nostruct-align/1fjgI.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2130/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgI/nostruct-align/1fjgI.t2k-w0.5.mod (nostruct-align/1fjgI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgI/nostruct-align/1fjgI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.981874
/projects/compbio/experiments/models.97/pdb/1b/1bts/nostruct-align/1bts.t2k-w0.5.mod(21):  Reading nostruct-align/1bts.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-531/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bts/nostruct-align/1bts.t2k-w0.5.mod (nostruct-align/1bts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bts/nostruct-align/1bts.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.921875
/projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t2k-w0.5.mod(22):  Reading nostruct-align/1bv1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t2k-w0.5.mod (nostruct-align/1bv1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.554909
/projects/compbio/experiments/models.97/pdb/1f/1fjgJ/nostruct-align/1fjgJ.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgJ/nostruct-align/1fjgJ.t2k-w0.5.mod (nostruct-align/1fjgJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgJ/nostruct-align/1fjgJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.116903
/projects/compbio/experiments/models.97/pdb/1f/1fjgK/nostruct-align/1fjgK.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgK.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18193/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgK/nostruct-align/1fjgK.t2k-w0.5.mod (nostruct-align/1fjgK.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgK/nostruct-align/1fjgK.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.312887
/projects/compbio/experiments/models.97/pdb/2p/2pflA/nostruct-align/2pflA.t2k-w0.5.mod(21):  Reading nostruct-align/2pflA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-3364/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pflA/nostruct-align/2pflA.t2k-w0.5.mod (nostruct-align/2pflA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pflA/nostruct-align/2pflA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.689863
/projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t2k-w0.5.mod(22):  Reading nostruct-align/1btu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-19546/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t2k-w0.5.mod (nostruct-align/1btu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.787891
/projects/compbio/experiments/models.97/pdb/1f/1fjgL/nostruct-align/1fjgL.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgL/nostruct-align/1fjgL.t2k-w0.5.mod (nostruct-align/1fjgL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgL/nostruct-align/1fjgL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.121899
/projects/compbio/experiments/models.97/pdb/1f/1fjgM/nostruct-align/1fjgM.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgM/nostruct-align/1fjgM.t2k-w0.5.mod (nostruct-align/1fjgM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgM/nostruct-align/1fjgM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.004887
/projects/compbio/experiments/models.97/pdb/1f/1fjgN/nostruct-align/1fjgN.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgN/nostruct-align/1fjgN.t2k-w0.5.mod (nostruct-align/1fjgN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgN/nostruct-align/1fjgN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.939873
/projects/compbio/experiments/models.97/pdb/1f/1fjgP/nostruct-align/1fjgP.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgP/nostruct-align/1fjgP.t2k-w0.5.mod (nostruct-align/1fjgP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgP/nostruct-align/1fjgP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.128864
/projects/compbio/experiments/models.97/pdb/1f/1fjgQ/nostruct-align/1fjgQ.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgQ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20857/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgQ/nostruct-align/1fjgQ.t2k-w0.5.mod (nostruct-align/1fjgQ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgQ/nostruct-align/1fjgQ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.259888
/projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t2k-w0.5.mod(22):  Reading nostruct-align/1byqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-24379/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t2k-w0.5.mod (nostruct-align/1byqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.294905
/projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t2k-w0.5.mod(21):  Reading nostruct-align/1d7qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t2k-w0.5.mod (nostruct-align/1d7qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.474867
/projects/compbio/experiments/models.97/pdb/1f/1fjgS/nostruct-align/1fjgS.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgS/nostruct-align/1fjgS.t2k-w0.5.mod (nostruct-align/1fjgS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgS/nostruct-align/1fjgS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.965879
/projects/compbio/experiments/models.97/pdb/1f/1fjgT/nostruct-align/1fjgT.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgT.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4208/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgT/nostruct-align/1fjgT.t2k-w0.5.mod (nostruct-align/1fjgT.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgT/nostruct-align/1fjgT.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.620874
/projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t2k-w0.5.mod(21):  Reading nostruct-align/1a4mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-4116/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t2k-w0.5.mod (nostruct-align/1a4mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.995905
/projects/compbio/experiments/models.97/pdb/1e/1efyA/nostruct-align/1efyA.t2k-w0.5.mod(22):  Reading nostruct-align/1efyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-10163/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efyA/nostruct-align/1efyA.t2k-w0.5.mod (nostruct-align/1efyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efyA/nostruct-align/1efyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.895863
/projects/compbio/experiments/models.97/pdb/1e/1eh7A/nostruct-align/1eh7A.t2k-w0.5.mod(22):  Reading nostruct-align/1eh7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-32101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eh7A/nostruct-align/1eh7A.t2k-w0.5.mod (nostruct-align/1eh7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eh7A/nostruct-align/1eh7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.704855
/projects/compbio/experiments/models.97/pdb/1f/1fjgV/nostruct-align/1fjgV.t2k-w0.5.mod(22):  Reading nostruct-align/1fjgV.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18227/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjgV/nostruct-align/1fjgV.t2k-w0.5.mod (nostruct-align/1fjgV.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjgV/nostruct-align/1fjgV.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.067856
/projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k-w0.5.mod(21):  Reading nostruct-align/2fcr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18710/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k-w0.5.mod (nostruct-align/2fcr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.725859
/projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t2k-w0.5.mod(21):  Reading nostruct-align/1cw5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30828/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t2k-w0.5.mod (nostruct-align/1cw5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.281895
/projects/compbio/experiments/models.97/pdb/1e/1e55A/nostruct-align/1e55A.t2k-w0.5.mod(21):  Reading nostruct-align/1e55A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e55A/nostruct-align/1e55A.t2k-w0.5.mod (nostruct-align/1e55A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e55A/nostruct-align/1e55A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.577894
/projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t2k-w0.5.mod(22):  Reading nostruct-align/1be3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30405/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t2k-w0.5.mod (nostruct-align/1be3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.901899
/projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t2k-w0.5.mod(21):  Reading nostruct-align/1be3B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-26126/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t2k-w0.5.mod (nostruct-align/1be3B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.719912
/projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t2k-w0.5.mod(22):  Reading nostruct-align/1be3C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25589/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t2k-w0.5.mod (nostruct-align/1be3C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.651869
/projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t2k-w0.5.mod(21):  Reading nostruct-align/1be3D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-22457/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t2k-w0.5.mod (nostruct-align/1be3D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.127893
/projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ca9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9660/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t2k-w0.5.mod (nostruct-align/1ca9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.155870
/projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t2k-w0.5.mod(21):  Reading nostruct-align/1be3F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-4078/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t2k-w0.5.mod (nostruct-align/1be3F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.043905
/projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t2k-w0.5.mod(22):  Reading nostruct-align/1be3G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t2k-w0.5.mod (nostruct-align/1be3G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.891909
/projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t2k-w0.5.mod(21):  Reading nostruct-align/1be3H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12808/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t2k-w0.5.mod (nostruct-align/1be3H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.699909
/projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t2k-w0.5.mod(22):  Reading nostruct-align/1be3I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4153/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t2k-w0.5.mod (nostruct-align/1be3I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.984882
/projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t2k-w0.5.mod(21):  Reading nostruct-align/1be3J.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23172/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t2k-w0.5.mod (nostruct-align/1be3J.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.335880
/projects/compbio/experiments/models.97/pdb/1b/1be3K/nostruct-align/1be3K.t2k-w0.5.mod(22):  Reading nostruct-align/1be3K.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2949/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be3K/nostruct-align/1be3K.t2k-w0.5.mod (nostruct-align/1be3K.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be3K/nostruct-align/1be3K.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.002880
/projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-w0.5.mod(22):  Reading nostruct-align/1fjhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26767/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-w0.5.mod (nostruct-align/1fjhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjhA/nostruct-align/1fjhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.988878
/projects/compbio/experiments/models.97/pdb/1f/1fjhB/nostruct-align/1fjhB.t2k-w0.5.mod(21):  Reading nostruct-align/1fjhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-16245/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjhB/nostruct-align/1fjhB.t2k-w0.5.mod (nostruct-align/1fjhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjhB/nostruct-align/1fjhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.288857
/projects/compbio/experiments/models.97/pdb/1j/1jk0A/nostruct-align/1jk0A.t2k-w0.5.mod(21):  Reading nostruct-align/1jk0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-27657/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk0A/nostruct-align/1jk0A.t2k-w0.5.mod (nostruct-align/1jk0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jk0A/nostruct-align/1jk0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.442900
/projects/compbio/experiments/models.97/pdb/1j/1jk0B/nostruct-align/1jk0B.t2k-w0.5.mod(22):  Reading nostruct-align/1jk0B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk0B/nostruct-align/1jk0B.t2k-w0.5.mod (nostruct-align/1jk0B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jk0B/nostruct-align/1jk0B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.099886
/projects/compbio/experiments/models.97/pdb/1e/1eulA/nostruct-align/1eulA.t2k-w0.5.mod(22):  Reading nostruct-align/1eulA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-11076/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eulA/nostruct-align/1eulA.t2k-w0.5.mod (nostruct-align/1eulA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eulA/nostruct-align/1eulA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.989874
/projects/compbio/experiments/models.97/pdb/1d/1dcjA/nostruct-align/1dcjA.t2k-w0.5.mod(21):  Reading nostruct-align/1dcjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16961/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcjA/nostruct-align/1dcjA.t2k-w0.5.mod (nostruct-align/1dcjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcjA/nostruct-align/1dcjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.012869
/projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-w0.5.mod(22):  Reading nostruct-align/1hd2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5833/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-w0.5.mod (nostruct-align/1hd2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hd2A/nostruct-align/1hd2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.400888
/projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t2k-w0.5.mod(21):  Reading nostruct-align/1bw3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24442/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t2k-w0.5.mod (nostruct-align/1bw3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.567905
/projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t2k-w0.5.mod(21):  Reading nostruct-align/1bw4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t2k-w0.5.mod (nostruct-align/1bw4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.567905
/projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t2k-w0.5.mod(21):  Reading nostruct-align/4mbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7404/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t2k-w0.5.mod (nostruct-align/4mbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.363884
/projects/compbio/experiments/models.97/pdb/1b/1bw5/nostruct-align/1bw5.t2k-w0.5.mod(21):  Reading nostruct-align/1bw5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-9240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw5/nostruct-align/1bw5.t2k-w0.5.mod (nostruct-align/1bw5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bw5/nostruct-align/1bw5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.813860
/projects/compbio/experiments/models.97/pdb/1f/1fs0E/nostruct-align/1fs0E.t2k-w0.5.mod(21):  Reading nostruct-align/1fs0E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs0E/nostruct-align/1fs0E.t2k-w0.5.mod (nostruct-align/1fs0E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fs0E/nostruct-align/1fs0E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.514860
/projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-w0.5.mod(22):  Reading nostruct-align/1gmxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2475/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-w0.5.mod (nostruct-align/1gmxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gmxA/nostruct-align/1gmxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.959911
/projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t2k-w0.5.mod(21):  Reading nostruct-align/1tocR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t2k-w0.5.mod (nostruct-align/1tocR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.616867
/projects/compbio/experiments/models.97/pdb/1d/1djtA/nostruct-align/1djtA.t2k-w0.5.mod(21):  Reading nostruct-align/1djtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djtA/nostruct-align/1djtA.t2k-w0.5.mod (nostruct-align/1djtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1djtA/nostruct-align/1djtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.976870
/projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t2k-w0.5.mod(22):  Reading nostruct-align/1dl2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-12268/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t2k-w0.5.mod (nostruct-align/1dl2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.003860
/projects/compbio/experiments/models.97/pdb/1f/1fs0G/nostruct-align/1fs0G.t2k-w0.5.mod(21):  Reading nostruct-align/1fs0G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-32392/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs0G/nostruct-align/1fs0G.t2k-w0.5.mod (nostruct-align/1fs0G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fs0G/nostruct-align/1fs0G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.606905
/projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t2k-w0.5.mod(22):  Reading nostruct-align/1byrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-4078/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t2k-w0.5.mod (nostruct-align/1byrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.538868
/projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-w0.5.mod(22):  Reading nostruct-align/2fdn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-8073/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-w0.5.mod (nostruct-align/2fdn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.820910
/projects/compbio/experiments/models.97/pdb/1e/1eh8A/nostruct-align/1eh8A.t2k-w0.5.mod(22):  Reading nostruct-align/1eh8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eh8A/nostruct-align/1eh8A.t2k-w0.5.mod (nostruct-align/1eh8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eh8A/nostruct-align/1eh8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.871912
/projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t2k-w0.5.mod(21):  Reading nostruct-align/1memA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-13945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t2k-w0.5.mod (nostruct-align/1memA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.523884
/projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t2k-w0.5.mod(22):  Reading nostruct-align/1qf5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-3761/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t2k-w0.5.mod (nostruct-align/1qf5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.390858
/projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t2k-w0.5.mod(21):  Reading nostruct-align/1b22A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-9266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t2k-w0.5.mod (nostruct-align/1b22A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.968906
/projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t2k-w0.5.mod(21):  Reading nostruct-align/1bvb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-11232/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t2k-w0.5.mod (nostruct-align/1bvb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.227852
/projects/compbio/experiments/models.97/pdb/1j/1jbiA/nostruct-align/1jbiA.t2k-w0.5.mod(21):  Reading nostruct-align/1jbiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbiA/nostruct-align/1jbiA.t2k-w0.5.mod (nostruct-align/1jbiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jbiA/nostruct-align/1jbiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.674862
/projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t2k-w0.5.mod(21):  Reading nostruct-align/2mnr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-20086/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t2k-w0.5.mod (nostruct-align/2mnr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.247910
/projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t2k-w0.5.mod(21):  Reading nostruct-align/1bvh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30433/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t2k-w0.5.mod (nostruct-align/1bvh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.108885
/projects/compbio/experiments/models.97/pdb/1e/1eumA/nostruct-align/1eumA.t2k-w0.5.mod(21):  Reading nostruct-align/1eumA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-11216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eumA/nostruct-align/1eumA.t2k-w0.5.mod (nostruct-align/1eumA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eumA/nostruct-align/1eumA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.781895
/projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t2k-w0.5.mod(21):  Reading nostruct-align/2dhqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-3730/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t2k-w0.5.mod (nostruct-align/2dhqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.745855
/projects/compbio/experiments/models.97/pdb/1d/1dckA/nostruct-align/1dckA.t2k-w0.5.mod(22):  Reading nostruct-align/1dckA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27321/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dckA/nostruct-align/1dckA.t2k-w0.5.mod (nostruct-align/1dckA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dckA/nostruct-align/1dckA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.778854
/projects/compbio/experiments/models.97/pdb/1d/1d0iA/nostruct-align/1d0iA.t2k-w0.5.mod(22):  Reading nostruct-align/1d0iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0iA/nostruct-align/1d0iA.t2k-w0.5.mod (nostruct-align/1d0iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0iA/nostruct-align/1d0iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.757862
/projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k-w0.5.mod(22):  Reading nostruct-align/1fs1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k-w0.5.mod (nostruct-align/1fs1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fs1A/nostruct-align/1fs1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.888870
/projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-w0.5.mod(22):  Reading nostruct-align/1fs1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20213/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-w0.5.mod (nostruct-align/1fs1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fs1B/nostruct-align/1fs1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.897884
/projects/compbio/experiments/models.97/pdb/1c/1cnoA/nostruct-align/1cnoA.t2k-w0.5.mod(22):  Reading nostruct-align/1cnoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2210/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnoA/nostruct-align/1cnoA.t2k-w0.5.mod (nostruct-align/1cnoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnoA/nostruct-align/1cnoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.258909
/projects/compbio/experiments/models.97/pdb/1z/1zncA/nostruct-align/1zncA.t2k-w0.5.mod(21):  Reading nostruct-align/1zncA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-30483/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zncA/nostruct-align/1zncA.t2k-w0.5.mod (nostruct-align/1zncA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zncA/nostruct-align/1zncA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.728909
/projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-w0.5.mod(22):  Reading nostruct-align/1bx7.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1628/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-w0.5.mod (nostruct-align/1bx7.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.519884
/projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t2k-w0.5.mod(22):  Reading nostruct-align/1agqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t2k-w0.5.mod (nostruct-align/1agqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.681890
/projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t2k-w0.5.mod(21):  Reading nostruct-align/1agqD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-5374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t2k-w0.5.mod (nostruct-align/1agqD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.347868
/projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t2k-w0.5.mod(21):  Reading nostruct-align/1nwpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t2k-w0.5.mod (nostruct-align/1nwpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.008873
/projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t2k-w0.5.mod(21):  Reading nostruct-align/1qf6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-10386/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t2k-w0.5.mod (nostruct-align/1qf6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.780901
/projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k-w0.5.mod(22):  Reading nostruct-align/1b0uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-7797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k-w0.5.mod (nostruct-align/1b0uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.353872
/projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t2k-w0.5.mod(21):  Reading nostruct-align/1xsm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5323/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t2k-w0.5.mod (nostruct-align/1xsm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.936907
/projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t2k-w0.5.mod(21):  Reading nostruct-align/1qlaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t2k-w0.5.mod (nostruct-align/1qlaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.021860
/projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-w0.5.mod(22):  Reading nostruct-align/1fjjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18421/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-w0.5.mod (nostruct-align/1fjjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjjA/nostruct-align/1fjjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.543896
/projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t2k-w0.5.mod(22):  Reading nostruct-align/1qlaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t2k-w0.5.mod (nostruct-align/1qlaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.494864
/projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t2k-w0.5.mod(22):  Reading nostruct-align/1qlaC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t2k-w0.5.mod (nostruct-align/1qlaC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.045855
/projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-w0.5.mod(22):  Reading nostruct-align/1hxrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10421/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-w0.5.mod (nostruct-align/1hxrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxrA/nostruct-align/1hxrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.697908
/projects/compbio/experiments/models.97/pdb/1k/1kezA/nostruct-align/1kezA.t2k-w0.5.mod(22):  Reading nostruct-align/1kezA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9774/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kezA/nostruct-align/1kezA.t2k-w0.5.mod (nostruct-align/1kezA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kezA/nostruct-align/1kezA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.287899
/projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-w0.5.mod(22):  Reading nostruct-align/1itxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-w0.5.mod (nostruct-align/1itxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1itxA/nostruct-align/1itxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.227900
/projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k-w0.5.mod(22):  Reading nostruct-align/1fqtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-32521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k-w0.5.mod (nostruct-align/1fqtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqtA/nostruct-align/1fqtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.293873
/projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t2k-w0.5.mod(22):  Reading nostruct-align/1by2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15199/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t2k-w0.5.mod (nostruct-align/1by2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.674868
/projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t2k-w0.5.mod(22):  Reading nostruct-align/2bc2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t2k-w0.5.mod (nostruct-align/2bc2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.088896
/projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t2k-w0.5.mod(22):  Reading nostruct-align/2bc2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-3354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t2k-w0.5.mod (nostruct-align/2bc2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.254854
/projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t2k-w0.5.mod(21):  Reading nostruct-align/1bwx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t2k-w0.5.mod (nostruct-align/1bwx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.793890
/projects/compbio/experiments/models.97/pdb/1b/1by9/nostruct-align/1by9.t2k-w0.5.mod(21):  Reading nostruct-align/1by9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-31437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1by9/nostruct-align/1by9.t2k-w0.5.mod (nostruct-align/1by9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1by9/nostruct-align/1by9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.788870
/projects/compbio/experiments/models.97/pdb/1a/1a4pA/nostruct-align/1a4pA.t2k-w0.5.mod(22):  Reading nostruct-align/1a4pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25167/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4pA/nostruct-align/1a4pA.t2k-w0.5.mod (nostruct-align/1a4pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4pA/nostruct-align/1a4pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.430855
/projects/compbio/experiments/models.97/pdb/1h/1hxs1/nostruct-align/1hxs1.t2k-w0.5.mod(22):  Reading nostruct-align/1hxs1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8989/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxs1/nostruct-align/1hxs1.t2k-w0.5.mod (nostruct-align/1hxs1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxs1/nostruct-align/1hxs1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.127851
/projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t2k-w0.5.mod(21):  Reading nostruct-align/5pti.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-852/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t2k-w0.5.mod (nostruct-align/5pti.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.491877
/projects/compbio/experiments/models.97/pdb/1h/1hxs2/nostruct-align/1hxs2.t2k-w0.5.mod(22):  Reading nostruct-align/1hxs2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxs2/nostruct-align/1hxs2.t2k-w0.5.mod (nostruct-align/1hxs2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxs2/nostruct-align/1hxs2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.728889
/projects/compbio/experiments/models.97/pdb/3b/3blm/nostruct-align/3blm.t2k-w0.5.mod(21):  Reading nostruct-align/3blm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-31085/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3b/3blm/nostruct-align/3blm.t2k-w0.5.mod (nostruct-align/3blm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3b/3blm/nostruct-align/3blm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.952892
/projects/compbio/experiments/models.97/pdb/1h/1hxs3/nostruct-align/1hxs3.t2k-w0.5.mod(22):  Reading nostruct-align/1hxs3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27430/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxs3/nostruct-align/1hxs3.t2k-w0.5.mod (nostruct-align/1hxs3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxs3/nostruct-align/1hxs3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.399881
/projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-w0.5.mod(22):  Reading nostruct-align/1e58A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-w0.5.mod (nostruct-align/1e58A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e58A/nostruct-align/1e58A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.592873
/projects/compbio/experiments/models.97/pdb/1i/1i3cA/nostruct-align/1i3cA.t2k-w0.5.mod(22):  Reading nostruct-align/1i3cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19773/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3cA/nostruct-align/1i3cA.t2k-w0.5.mod (nostruct-align/1i3cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i3cA/nostruct-align/1i3cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.317856
/projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t2k-w0.5.mod(21):  Reading nostruct-align/1agrE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2350/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t2k-w0.5.mod (nostruct-align/1agrE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.993883
/projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t2k-w0.5.mod(22):  Reading nostruct-align/1b24A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t2k-w0.5.mod (nostruct-align/1b24A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.951885
/projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t2k-w0.5.mod(21):  Reading nostruct-align/1agrH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-2358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t2k-w0.5.mod (nostruct-align/1agrH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.336910
/projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t2k-w0.5.mod(22):  Reading nostruct-align/5ptp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t2k-w0.5.mod (nostruct-align/5ptp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.824852
/projects/compbio/experiments/models.97/pdb/1i/1imoA/nostruct-align/1imoA.t2k-w0.5.mod(21):  Reading nostruct-align/1imoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-17162/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imoA/nostruct-align/1imoA.t2k-w0.5.mod (nostruct-align/1imoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1imoA/nostruct-align/1imoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.097889
/projects/compbio/experiments/models.97/pdb/1f/1fjkA/nostruct-align/1fjkA.t2k-w0.5.mod(21):  Reading nostruct-align/1fjkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-27738/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjkA/nostruct-align/1fjkA.t2k-w0.5.mod (nostruct-align/1fjkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjkA/nostruct-align/1fjkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.205868
/projects/compbio/experiments/models.97/pdb/1j/1jk3A/nostruct-align/1jk3A.t2k-w0.5.mod(22):  Reading nostruct-align/1jk3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-3764/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk3A/nostruct-align/1jk3A.t2k-w0.5.mod (nostruct-align/1jk3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jk3A/nostruct-align/1jk3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.801876
/projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t2k-w0.5.mod(22):  Reading nostruct-align/1bxm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25497/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t2k-w0.5.mod (nostruct-align/1bxm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.420864
/projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t2k-w0.5.mod(22):  Reading nostruct-align/1c4eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30548/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t2k-w0.5.mod (nostruct-align/1c4eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.157892
/projects/compbio/experiments/models.97/pdb/1e/1euoA/nostruct-align/1euoA.t2k-w0.5.mod(21):  Reading nostruct-align/1euoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31912/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euoA/nostruct-align/1euoA.t2k-w0.5.mod (nostruct-align/1euoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1euoA/nostruct-align/1euoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.468853
/projects/compbio/experiments/models.97/pdb/1j/1jae/nostruct-align/1jae.t2k-w0.5.mod(22):  Reading nostruct-align/1jae.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-3179/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jae/nostruct-align/1jae.t2k-w0.5.mod (nostruct-align/1jae.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jae/nostruct-align/1jae.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.699909
/projects/compbio/experiments/models.97/pdb/1h/1hbwA/nostruct-align/1hbwA.t2k-w0.5.mod(21):  Reading nostruct-align/1hbwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-27156/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbwA/nostruct-align/1hbwA.t2k-w0.5.mod (nostruct-align/1hbwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbwA/nostruct-align/1hbwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.111902
/projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t2k-w0.5.mod(21):  Reading nostruct-align/2fgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-2398/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t2k-w0.5.mod (nostruct-align/2fgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.048876
/projects/compbio/experiments/models.97/pdb/1e/1ea1A/nostruct-align/1ea1A.t2k-w0.5.mod(21):  Reading nostruct-align/1ea1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ea1A/nostruct-align/1ea1A.t2k-w0.5.mod (nostruct-align/1ea1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ea1A/nostruct-align/1ea1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.367901
/projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k-w0.5.mod(21):  Reading nostruct-align/1dl5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-4025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k-w0.5.mod (nostruct-align/1dl5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dl5A/nostruct-align/1dl5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.941887
/projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t2k-w0.5.mod(21):  Reading nostruct-align/1byuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-1318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t2k-w0.5.mod (nostruct-align/1byuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.709856
/projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t2k-w0.5.mod(21):  Reading nostruct-align/1d7uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-8943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t2k-w0.5.mod (nostruct-align/1d7uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.677870
/projects/compbio/experiments/models.97/pdb/3x/3xis/nostruct-align/3xis.t2k-w0.5.mod(22):  Reading nostruct-align/3xis.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10253/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3x/3xis/nostruct-align/3xis.t2k-w0.5.mod (nostruct-align/3xis.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3x/3xis/nostruct-align/3xis.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.037897
/projects/compbio/experiments/models.97/pdb/1i/1i3dA/nostruct-align/1i3dA.t2k-w0.5.mod(22):  Reading nostruct-align/1i3dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3dA/nostruct-align/1i3dA.t2k-w0.5.mod (nostruct-align/1i3dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i3dA/nostruct-align/1i3dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.314909
/projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t2k-w0.5.mod(21):  Reading nostruct-align/1rhi3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t2k-w0.5.mod (nostruct-align/1rhi3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.059879
/projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t2k-w0.5.mod(22):  Reading nostruct-align/1b25A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15812/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t2k-w0.5.mod (nostruct-align/1b25A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.850857
/projects/compbio/experiments/models.97/pdb/1f/1fcbA/nostruct-align/1fcbA.t2k-w0.5.mod(21):  Reading nostruct-align/1fcbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11229/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcbA/nostruct-align/1fcbA.t2k-w0.5.mod (nostruct-align/1fcbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fcbA/nostruct-align/1fcbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.863903
/projects/compbio/experiments/models.97/pdb/4a/4aahA/nostruct-align/4aahA.t2k-w0.5.mod(21):  Reading nostruct-align/4aahA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-22793/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4a/4aahA/nostruct-align/4aahA.t2k-w0.5.mod (nostruct-align/4aahA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4a/4aahA/nostruct-align/4aahA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.586872
/projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-w0.5.mod(22):  Reading nostruct-align/1qf8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-w0.5.mod (nostruct-align/1qf8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.535898
/projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t2k-w0.5.mod(22):  Reading nostruct-align/1byb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-18748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t2k-w0.5.mod (nostruct-align/1byb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.776861
/projects/compbio/experiments/models.97/pdb/4a/4aahB/nostruct-align/4aahB.t2k-w0.5.mod(21):  Reading nostruct-align/4aahB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-18295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4a/4aahB/nostruct-align/4aahB.t2k-w0.5.mod (nostruct-align/4aahB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4a/4aahB/nostruct-align/4aahB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.018887
/projects/compbio/experiments/models.97/pdb/1k/1k2yX/nostruct-align/1k2yX.t2k-w0.5.mod(22):  Reading nostruct-align/1k2yX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-18297/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k2yX/nostruct-align/1k2yX.t2k-w0.5.mod (nostruct-align/1k2yX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k2yX/nostruct-align/1k2yX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.314896
/projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k-w0.5.mod(21):  Reading nostruct-align/1enfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10827/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k-w0.5.mod (nostruct-align/1enfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.390862
/projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-w0.5.mod(22):  Reading nostruct-align/1byi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13198/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-w0.5.mod (nostruct-align/1byi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.410877
/projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t2k-w0.5.mod(21):  Reading nostruct-align/1fjlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-28197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t2k-w0.5.mod (nostruct-align/1fjlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.703909
/projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t2k-w0.5.mod(21):  Reading nostruct-align/1cghA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-21670/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t2k-w0.5.mod (nostruct-align/1cghA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.759872
/projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t2k-w0.5.mod(21):  Reading nostruct-align/2fha.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2722/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t2k-w0.5.mod (nostruct-align/2fha.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.566910
/projects/compbio/experiments/models.97/pdb/1e/1eupA/nostruct-align/1eupA.t2k-w0.5.mod(21):  Reading nostruct-align/1eupA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-9827/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eupA/nostruct-align/1eupA.t2k-w0.5.mod (nostruct-align/1eupA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eupA/nostruct-align/1eupA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.356884
/projects/compbio/experiments/models.97/pdb/1d/1dcnA/nostruct-align/1dcnA.t2k-w0.5.mod(21):  Reading nostruct-align/1dcnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2984/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcnA/nostruct-align/1dcnA.t2k-w0.5.mod (nostruct-align/1dcnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcnA/nostruct-align/1dcnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.303875
/projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t2k-w0.5.mod(21):  Reading nostruct-align/1brlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6476/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t2k-w0.5.mod (nostruct-align/1brlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.164888
/projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t2k-w0.5.mod(21):  Reading nostruct-align/1brlB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-32690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t2k-w0.5.mod (nostruct-align/1brlB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.475882
/projects/compbio/experiments/models.97/pdb/1f/1fqvA/nostruct-align/1fqvA.t2k-w0.5.mod(21):  Reading nostruct-align/1fqvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqvA/nostruct-align/1fqvA.t2k-w0.5.mod (nostruct-align/1fqvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqvA/nostruct-align/1fqvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -42.403885
/projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t2k-w0.5.mod(21):  Reading nostruct-align/1qsmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-4406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t2k-w0.5.mod (nostruct-align/1qsmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.522860
/projects/compbio/experiments/models.97/pdb/1d/1dcnD/nostruct-align/1dcnD.t2k-w0.5.mod(21):  Reading nostruct-align/1dcnD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-30776/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcnD/nostruct-align/1dcnD.t2k-w0.5.mod (nostruct-align/1dcnD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcnD/nostruct-align/1dcnD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.303888
/projects/compbio/experiments/models.97/pdb/1e/1ea2A/nostruct-align/1ea2A.t2k-w0.5.mod(22):  Reading nostruct-align/1ea2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2678/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ea2A/nostruct-align/1ea2A.t2k-w0.5.mod (nostruct-align/1ea2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ea2A/nostruct-align/1ea2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.997900
/projects/compbio/experiments/models.97/pdb/1f/1fqvD/nostruct-align/1fqvD.t2k-w0.5.mod(21):  Reading nostruct-align/1fqvD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-23164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqvD/nostruct-align/1fqvD.t2k-w0.5.mod (nostruct-align/1fqvD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqvD/nostruct-align/1fqvD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.106867
/projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t2k-w0.5.mod(21):  Reading nostruct-align/2gsaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-20439/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t2k-w0.5.mod (nostruct-align/2gsaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.015909
/projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t2k-w0.5.mod(21):  Reading nostruct-align/2mrb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-25891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t2k-w0.5.mod (nostruct-align/2mrb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.965891
/projects/compbio/experiments/models.97/pdb/1d/1djxA/nostruct-align/1djxA.t2k-w0.5.mod(22):  Reading nostruct-align/1djxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djxA/nostruct-align/1djxA.t2k-w0.5.mod (nostruct-align/1djxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1djxA/nostruct-align/1djxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.017855
/projects/compbio/experiments/models.97/pdb/1d/1dl6A/nostruct-align/1dl6A.t2k-w0.5.mod(21):  Reading nostruct-align/1dl6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-25645/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dl6A/nostruct-align/1dl6A.t2k-w0.5.mod (nostruct-align/1dl6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dl6A/nostruct-align/1dl6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.505882
/projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t2k-w0.5.mod(21):  Reading nostruct-align/1djxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13008/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t2k-w0.5.mod (nostruct-align/1djxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.422857
/projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t2k-w0.5.mod(21):  Reading nostruct-align/1qli.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19258/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t2k-w0.5.mod (nostruct-align/1qli.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.232880
/projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t2k-w0.5.mod(21):  Reading nostruct-align/1skyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-10749/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t2k-w0.5.mod (nostruct-align/1skyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.693884
/projects/compbio/experiments/models.97/pdb/1f/1fqvJ/nostruct-align/1fqvJ.t2k-w0.5.mod(21):  Reading nostruct-align/1fqvJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqvJ/nostruct-align/1fqvJ.t2k-w0.5.mod (nostruct-align/1fqvJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqvJ/nostruct-align/1fqvJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.107887
/projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t2k-w0.5.mod(21):  Reading nostruct-align/2tmdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26677/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t2k-w0.5.mod (nostruct-align/2tmdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.328896
/projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t2k-w0.5.mod(21):  Reading nostruct-align/1skyE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-15185/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t2k-w0.5.mod (nostruct-align/1skyE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.387888
/projects/compbio/experiments/models.97/pdb/1b/1b0xA/nostruct-align/1b0xA.t2k-w0.5.mod(22):  Reading nostruct-align/1b0xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-3818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0xA/nostruct-align/1b0xA.t2k-w0.5.mod (nostruct-align/1b0xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b0xA/nostruct-align/1b0xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.964903
/projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qf9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4798/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k-w0.5.mod (nostruct-align/1qf9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qf9A/nostruct-align/1qf9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.744892
/projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t2k-w0.5.mod(21):  Reading nostruct-align/1bza.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-3160/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t2k-w0.5.mod (nostruct-align/1bza.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.026897
/projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t2k-w0.5.mod(22):  Reading nostruct-align/1draA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22368/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t2k-w0.5.mod (nostruct-align/1draA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.547907
/projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-w0.5.mod(22):  Reading nostruct-align/1hqkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-w0.5.mod (nostruct-align/1hqkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hqkA/nostruct-align/1hqkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.082909
/projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t2k-w0.5.mod(21):  Reading nostruct-align/1bzg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22987/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t2k-w0.5.mod (nostruct-align/1bzg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.653873
/projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t2k-w0.5.mod(22):  Reading nostruct-align/1bkcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15236/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t2k-w0.5.mod (nostruct-align/1bkcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.497879
/projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t2k-w0.5.mod(21):  Reading nostruct-align/1qldA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22935/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t2k-w0.5.mod (nostruct-align/1qldA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.657907
/projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t2k-w0.5.mod (nostruct-align/1b8aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.453869
/projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t2k-w0.5.mod(21):  Reading nostruct-align/1fjmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-6275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t2k-w0.5.mod (nostruct-align/1fjmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.925869
/projects/compbio/experiments/models.97/pdb/1d/1dykA/nostruct-align/1dykA.t2k-w0.5.mod(21):  Reading nostruct-align/1dykA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-10948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dykA/nostruct-align/1dykA.t2k-w0.5.mod (nostruct-align/1dykA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dykA/nostruct-align/1dykA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.740879
/projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t2k-w0.5.mod(22):  Reading nostruct-align/1bkcE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t2k-w0.5.mod (nostruct-align/1bkcE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.547886
/projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-w0.5.mod(22):  Reading nostruct-align/1j83A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-6552/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-w0.5.mod (nostruct-align/1j83A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j83A/nostruct-align/1j83A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.199854
/projects/compbio/experiments/models.97/pdb/1g/1gfsA/nostruct-align/1gfsA.t2k-w0.5.mod(21):  Reading nostruct-align/1gfsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-17775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gfsA/nostruct-align/1gfsA.t2k-w0.5.mod (nostruct-align/1gfsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gfsA/nostruct-align/1gfsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.128870
/projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t2k-w0.5.mod(21):  Reading nostruct-align/2rmpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5670/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t2k-w0.5.mod (nostruct-align/2rmpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.932854
/projects/compbio/experiments/models.97/pdb/1g/1g3qA/nostruct-align/1g3qA.t2k-w0.5.mod(22):  Reading nostruct-align/1g3qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5400/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3qA/nostruct-align/1g3qA.t2k-w0.5.mod (nostruct-align/1g3qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g3qA/nostruct-align/1g3qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.699877
/projects/compbio/experiments/models.97/pdb/1d/1dcoA/nostruct-align/1dcoA.t2k-w0.5.mod(22):  Reading nostruct-align/1dcoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-625/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcoA/nostruct-align/1dcoA.t2k-w0.5.mod (nostruct-align/1dcoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcoA/nostruct-align/1dcoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.812906
/projects/compbio/experiments/models.97/pdb/1h/1hbyA/nostruct-align/1hbyA.t2k-w0.5.mod(22):  Reading nostruct-align/1hbyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbyA/nostruct-align/1hbyA.t2k-w0.5.mod (nostruct-align/1hbyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbyA/nostruct-align/1hbyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.654888
/projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t2k-w0.5.mod(22):  Reading nostruct-align/1brmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-26679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t2k-w0.5.mod (nostruct-align/1brmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.803865
/projects/compbio/experiments/models.97/pdb/1h/1hd7A/nostruct-align/1hd7A.t2k-w0.5.mod(21):  Reading nostruct-align/1hd7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-11875/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hd7A/nostruct-align/1hd7A.t2k-w0.5.mod (nostruct-align/1hd7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hd7A/nostruct-align/1hd7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.728865
/projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t2k-w0.5.mod(21):  Reading nostruct-align/2sivA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-6953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t2k-w0.5.mod (nostruct-align/2sivA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.773870
/projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k-w0.5.mod(22):  Reading nostruct-align/1fs5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27023/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k-w0.5.mod (nostruct-align/1fs5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fs5A/nostruct-align/1fs5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.059872
/projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t2k-w0.5.mod(21):  Reading nostruct-align/2sivB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t2k-w0.5.mod (nostruct-align/2sivB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.743864
/projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-w0.5.mod(22):  Reading nostruct-align/1jiwI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-w0.5.mod (nostruct-align/1jiwI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jiwI/nostruct-align/1jiwI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.406862
/projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t2k-w0.5.mod(22):  Reading nostruct-align/1avgI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-11748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t2k-w0.5.mod (nostruct-align/1avgI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.029863
/projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t2k-w0.5.mod(21):  Reading nostruct-align/1cnsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-11463/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t2k-w0.5.mod (nostruct-align/1cnsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.506851
/projects/compbio/experiments/models.97/pdb/3m/3mhtA/nostruct-align/3mhtA.t2k-w0.5.mod(21):  Reading nostruct-align/3mhtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-2613/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3mhtA/nostruct-align/3mhtA.t2k-w0.5.mod (nostruct-align/3mhtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3mhtA/nostruct-align/3mhtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.372866
/projects/compbio/experiments/models.97/pdb/1j/1jiwP/nostruct-align/1jiwP.t2k-w0.5.mod(22):  Reading nostruct-align/1jiwP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3692/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jiwP/nostruct-align/1jiwP.t2k-w0.5.mod (nostruct-align/1jiwP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jiwP/nostruct-align/1jiwP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.740900
/projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t2k-w0.5.mod(22):  Reading nostruct-align/1bywA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t2k-w0.5.mod (nostruct-align/1bywA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.913862
/projects/compbio/experiments/models.97/pdb/1h/1hjbA/nostruct-align/1hjbA.t2k-w0.5.mod(21):  Reading nostruct-align/1hjbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25193/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hjbA/nostruct-align/1hjbA.t2k-w0.5.mod (nostruct-align/1hjbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hjbA/nostruct-align/1hjbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.025900
/projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t2k-w0.5.mod(21):  Reading nostruct-align/1a4sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-10083/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t2k-w0.5.mod (nostruct-align/1a4sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.218878
/projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t2k-w0.5.mod(21):  Reading nostruct-align/1jcv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28500/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t2k-w0.5.mod (nostruct-align/1jcv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.964851
/projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t2k-w0.5.mod(21):  Reading nostruct-align/1be9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t2k-w0.5.mod (nostruct-align/1be9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.892866
/projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t2k-w0.5.mod(22):  Reading nostruct-align/1b0yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29343/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t2k-w0.5.mod (nostruct-align/1b0yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.699905
/projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t2k-w0.5.mod(22):  Reading nostruct-align/1fcdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-17239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t2k-w0.5.mod (nostruct-align/1fcdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.199907
/projects/compbio/experiments/models.97/pdb/1k/1ktpA/nostruct-align/1ktpA.t2k-w0.5.mod(22):  Reading nostruct-align/1ktpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-23515/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktpA/nostruct-align/1ktpA.t2k-w0.5.mod (nostruct-align/1ktpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ktpA/nostruct-align/1ktpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.374905
/projects/compbio/experiments/models.97/pdb/1k/1ktpB/nostruct-align/1ktpB.t2k-w0.5.mod(22):  Reading nostruct-align/1ktpB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktpB/nostruct-align/1ktpB.t2k-w0.5.mod (nostruct-align/1ktpB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ktpB/nostruct-align/1ktpB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.477869
/projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t2k-w0.5.mod(21):  Reading nostruct-align/1fcdC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-6084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t2k-w0.5.mod (nostruct-align/1fcdC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.126856
/projects/compbio/experiments/models.97/pdb/1c/1cnt1/nostruct-align/1cnt1.t2k-w0.5.mod(22):  Reading nostruct-align/1cnt1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32047/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnt1/nostruct-align/1cnt1.t2k-w0.5.mod (nostruct-align/1cnt1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnt1/nostruct-align/1cnt1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.986851
/projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t2k-w0.5.mod(22):  Reading nostruct-align/1xwl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-28481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t2k-w0.5.mod (nostruct-align/1xwl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.968910
/projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t2k-w0.5.mod(21):  Reading nostruct-align/1cnt2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-4058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t2k-w0.5.mod (nostruct-align/1cnt2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.240879
/projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t2k-w0.5.mod(22):  Reading nostruct-align/2occA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10964/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t2k-w0.5.mod (nostruct-align/2occA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.760853
/projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t2k-w0.5.mod(21):  Reading nostruct-align/1cnt3.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-26420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t2k-w0.5.mod (nostruct-align/1cnt3.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.001894
/projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t2k-w0.5.mod(21):  Reading nostruct-align/2occB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16601/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t2k-w0.5.mod (nostruct-align/2occB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.000902
/projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t2k-w0.5.mod(21):  Reading nostruct-align/5hpgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-30271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t2k-w0.5.mod (nostruct-align/5hpgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.846872
/projects/compbio/experiments/models.97/pdb/2o/2occC/nostruct-align/2occC.t2k-w0.5.mod(22):  Reading nostruct-align/2occC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28761/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occC/nostruct-align/2occC.t2k-w0.5.mod (nostruct-align/2occC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occC/nostruct-align/2occC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.741886
/projects/compbio/experiments/models.97/pdb/1f/1fjnA/nostruct-align/1fjnA.t2k-w0.5.mod(21):  Reading nostruct-align/1fjnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-27902/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjnA/nostruct-align/1fjnA.t2k-w0.5.mod (nostruct-align/1fjnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjnA/nostruct-align/1fjnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.709892
/projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t2k-w0.5.mod(22):  Reading nostruct-align/2occD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t2k-w0.5.mod (nostruct-align/2occD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.534889
/projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-w0.5.mod(22):  Reading nostruct-align/1f7lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-19275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-w0.5.mod (nostruct-align/1f7lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f7lA/nostruct-align/1f7lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.906857
/projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-w0.5.mod(22):  Reading nostruct-align/1jixA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-16440/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-w0.5.mod (nostruct-align/1jixA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jixA/nostruct-align/1jixA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.354883
/projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t2k-w0.5.mod(22):  Reading nostruct-align/2occE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-15400/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t2k-w0.5.mod (nostruct-align/2occE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.317896
/projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t2k-w0.5.mod(22):  Reading nostruct-align/2occF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1342/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t2k-w0.5.mod (nostruct-align/2occF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.325899
/projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t2k-w0.5.mod(22):  Reading nostruct-align/1qleD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t2k-w0.5.mod (nostruct-align/1qleD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.062870
/projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-w0.5.mod(22):  Reading nostruct-align/1hz4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24227/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-w0.5.mod (nostruct-align/1hz4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hz4A/nostruct-align/1hz4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.735891
/projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t2k-w0.5.mod(21):  Reading nostruct-align/1jdc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-21739/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t2k-w0.5.mod (nostruct-align/1jdc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.238886
/projects/compbio/experiments/models.97/pdb/1g/1gh2A/nostruct-align/1gh2A.t2k-w0.5.mod(22):  Reading nostruct-align/1gh2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh2A/nostruct-align/1gh2A.t2k-w0.5.mod (nostruct-align/1gh2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gh2A/nostruct-align/1gh2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.598879
/projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t2k-w0.5.mod(22):  Reading nostruct-align/2occG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t2k-w0.5.mod (nostruct-align/2occG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.054876
/projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t2k-w0.5.mod(22):  Reading nostruct-align/2occH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1673/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t2k-w0.5.mod (nostruct-align/2occH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.399862
/projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ew0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2185/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-w0.5.mod (nostruct-align/1ew0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ew0A/nostruct-align/1ew0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.983889
/projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t2k-w0.5.mod(22):  Reading nostruct-align/2occI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19686/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t2k-w0.5.mod (nostruct-align/2occI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.934870
/projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t2k-w0.5.mod(21):  Reading nostruct-align/2ezxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-5064/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t2k-w0.5.mod (nostruct-align/2ezxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.036863
/projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t2k-w0.5.mod(22):  Reading nostruct-align/2occJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22566/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t2k-w0.5.mod (nostruct-align/2occJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.230877
/projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t2k-w0.5.mod(21):  Reading nostruct-align/1dcpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t2k-w0.5.mod (nostruct-align/1dcpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.776909
/projects/compbio/experiments/models.97/pdb/1h/1hd8A/nostruct-align/1hd8A.t2k-w0.5.mod(22):  Reading nostruct-align/1hd8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19210/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hd8A/nostruct-align/1hd8A.t2k-w0.5.mod (nostruct-align/1hd8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hd8A/nostruct-align/1hd8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.448904
/projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t2k-w0.5.mod(22):  Reading nostruct-align/2occK.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24781/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t2k-w0.5.mod (nostruct-align/2occK.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.320906
/projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t2k-w0.5.mod(21):  Reading nostruct-align/1d0nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13656/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t2k-w0.5.mod (nostruct-align/1d0nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.097906
/projects/compbio/experiments/models.97/pdb/1h/1hbzA/nostruct-align/1hbzA.t2k-w0.5.mod(22):  Reading nostruct-align/1hbzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hbzA/nostruct-align/1hbzA.t2k-w0.5.mod (nostruct-align/1hbzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hbzA/nostruct-align/1hbzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.437851
/projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t2k-w0.5.mod(22):  Reading nostruct-align/2occL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18839/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t2k-w0.5.mod (nostruct-align/2occL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.965855
/projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t2k-w0.5.mod(22):  Reading nostruct-align/2occM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10014/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t2k-w0.5.mod (nostruct-align/2occM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.016903
/projects/compbio/experiments/models.97/pdb/1j/1jqaA/nostruct-align/1jqaA.t2k-w0.5.mod(21):  Reading nostruct-align/1jqaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-5505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqaA/nostruct-align/1jqaA.t2k-w0.5.mod (nostruct-align/1jqaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jqaA/nostruct-align/1jqaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.063873
/projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t2k-w0.5.mod(21):  Reading nostruct-align/1pamA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7779/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t2k-w0.5.mod (nostruct-align/1pamA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.846851
/projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t2k-w0.5.mod(22):  Reading nostruct-align/1cp2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-534/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t2k-w0.5.mod (nostruct-align/1cp2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.850863
/projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t2k-w0.5.mod(22):  Reading nostruct-align/1qnf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-4283/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t2k-w0.5.mod (nostruct-align/1qnf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.142904
/projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t2k-w0.5.mod(22):  Reading nostruct-align/1bkdS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-4833/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t2k-w0.5.mod (nostruct-align/1bkdS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.837873
/projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t2k-w0.5.mod(21):  Reading nostruct-align/1brnL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-21387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t2k-w0.5.mod (nostruct-align/1brnL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.624861
/projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t2k-w0.5.mod(21):  Reading nostruct-align/7icd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-5341/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t2k-w0.5.mod (nostruct-align/7icd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.763865
/projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t2k-w0.5.mod(22):  Reading nostruct-align/1jdw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-31028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t2k-w0.5.mod (nostruct-align/1jdw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.138901
/projects/compbio/experiments/models.97/pdb/1f/1f0cA/nostruct-align/1f0cA.t2k-w0.5.mod(21):  Reading nostruct-align/1f0cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-30363/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0cA/nostruct-align/1f0cA.t2k-w0.5.mod (nostruct-align/1f0cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0cA/nostruct-align/1f0cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.154892
/projects/compbio/experiments/models.97/pdb/9p/9pap/nostruct-align/9pap.t2k-w0.5.mod(21):  Reading nostruct-align/9pap.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9p/9pap/nostruct-align/9pap.t2k-w0.5.mod (nostruct-align/9pap.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9p/9pap/nostruct-align/9pap.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.682875
/projects/compbio/experiments/models.97/pdb/1i/1io1A/nostruct-align/1io1A.t2k-w0.5.mod(21):  Reading nostruct-align/1io1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1io1A/nostruct-align/1io1A.t2k-w0.5.mod (nostruct-align/1io1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1io1A/nostruct-align/1io1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.611887
/projects/compbio/experiments/models.97/pdb/1d/1dymA/nostruct-align/1dymA.t2k-w0.5.mod(22):  Reading nostruct-align/1dymA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-16781/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dymA/nostruct-align/1dymA.t2k-w0.5.mod (nostruct-align/1dymA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dymA/nostruct-align/1dymA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.556883
/projects/compbio/experiments/models.97/pdb/1j/1jk7A/nostruct-align/1jk7A.t2k-w0.5.mod(22):  Reading nostruct-align/1jk7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-10527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jk7A/nostruct-align/1jk7A.t2k-w0.5.mod (nostruct-align/1jk7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jk7A/nostruct-align/1jk7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.646902
/projects/compbio/experiments/models.97/pdb/1j/1j6wA/nostruct-align/1j6wA.t2k-w0.5.mod(22):  Reading nostruct-align/1j6wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-1973/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j6wA/nostruct-align/1j6wA.t2k-w0.5.mod (nostruct-align/1j6wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j6wA/nostruct-align/1j6wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.374910
/projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t2k-w0.5.mod(22):  Reading nostruct-align/1dcqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t2k-w0.5.mod (nostruct-align/1dcqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.380867
/projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t2k-w0.5.mod(21):  Reading nostruct-align/1broA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-9347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t2k-w0.5.mod (nostruct-align/1broA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.801889
/projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t2k-w0.5.mod(21):  Reading nostruct-align/1qspA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3036/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t2k-w0.5.mod (nostruct-align/1qspA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.884874
/projects/compbio/experiments/models.97/pdb/1f/1fqyA/nostruct-align/1fqyA.t2k-w0.5.mod(21):  Reading nostruct-align/1fqyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-30748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fqyA/nostruct-align/1fqyA.t2k-w0.5.mod (nostruct-align/1fqyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fqyA/nostruct-align/1fqyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.969906
/projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-w0.5.mod(22):  Reading nostruct-align/1fs7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20246/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-w0.5.mod (nostruct-align/1fs7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fs7A/nostruct-align/1fs7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.757883
/projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k-w0.5.mod(21):  Reading nostruct-align/1ea5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2550/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k-w0.5.mod (nostruct-align/1ea5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ea5A/nostruct-align/1ea5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.115866
/projects/compbio/experiments/models.97/pdb/1c/1cnuA/nostruct-align/1cnuA.t2k-w0.5.mod(21):  Reading nostruct-align/1cnuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23678/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnuA/nostruct-align/1cnuA.t2k-w0.5.mod (nostruct-align/1cnuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnuA/nostruct-align/1cnuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.159864
/projects/compbio/experiments/models.97/pdb/1c/1cp3A/nostruct-align/1cp3A.t2k-w0.5.mod(21):  Reading nostruct-align/1cp3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cp3A/nostruct-align/1cp3A.t2k-w0.5.mod (nostruct-align/1cp3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cp3A/nostruct-align/1cp3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.737909
/projects/compbio/experiments/models.97/pdb/1j/1jem/nostruct-align/1jem.t2k-w0.5.mod(22):  Reading nostruct-align/1jem.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jem/nostruct-align/1jem.t2k-w0.5.mod (nostruct-align/1jem.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jem/nostruct-align/1jem.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.302896
/projects/compbio/experiments/models.97/pdb/1b/1byyA/nostruct-align/1byyA.t2k-w0.5.mod(21):  Reading nostruct-align/1byyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13167/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1byyA/nostruct-align/1byyA.t2k-w0.5.mod (nostruct-align/1byyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1byyA/nostruct-align/1byyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.976858
/projects/compbio/experiments/models.97/pdb/1d/1d7yA/nostruct-align/1d7yA.t2k-w0.5.mod(21):  Reading nostruct-align/1d7yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-5834/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d7yA/nostruct-align/1d7yA.t2k-w0.5.mod (nostruct-align/1d7yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d7yA/nostruct-align/1d7yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.540882
/projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k-w0.5.mod(22):  Reading nostruct-align/1jer.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k-w0.5.mod (nostruct-align/1jer.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.490883
/projects/compbio/experiments/models.97/pdb/1f/1fybA/nostruct-align/1fybA.t2k-w0.5.mod(21):  Reading nostruct-align/1fybA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-11933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fybA/nostruct-align/1fybA.t2k-w0.5.mod (nostruct-align/1fybA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fybA/nostruct-align/1fybA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.835876
/projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t2k-w0.5.mod(21):  Reading nostruct-align/1a4uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-28450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t2k-w0.5.mod (nostruct-align/1a4uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.825888
/projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t2k-w0.5.mod(22):  Reading nostruct-align/1ycqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3102/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t2k-w0.5.mod (nostruct-align/1ycqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.553888
/projects/compbio/experiments/models.97/pdb/1i/1io2A/nostruct-align/1io2A.t2k-w0.5.mod(21):  Reading nostruct-align/1io2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1io2A/nostruct-align/1io2A.t2k-w0.5.mod (nostruct-align/1io2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1io2A/nostruct-align/1io2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.995909
/projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t2k-w0.5.mod(21):  Reading nostruct-align/1xyn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3560/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t2k-w0.5.mod (nostruct-align/1xyn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.300852
/projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t2k-w0.5.mod(21):  Reading nostruct-align/1qlgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27428/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t2k-w0.5.mod (nostruct-align/1qlgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.820881
/projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14095/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t2k-w0.5.mod (nostruct-align/1b8dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.645872
/projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t2k-w0.5.mod(21):  Reading nostruct-align/1dynA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-28286/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t2k-w0.5.mod (nostruct-align/1dynA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.825857
/projects/compbio/experiments/models.97/pdb/1h/1hxxA/nostruct-align/1hxxA.t2k-w0.5.mod(22):  Reading nostruct-align/1hxxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-24127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hxxA/nostruct-align/1hxxA.t2k-w0.5.mod (nostruct-align/1hxxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hxxA/nostruct-align/1hxxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.425858
/projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-w0.5.mod(22):  Reading nostruct-align/1hz6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26705/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-w0.5.mod (nostruct-align/1hz6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hz6A/nostruct-align/1hz6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.990871
/projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t2k-w0.5.mod(22):  Reading nostruct-align/119l.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t2k-w0.5.mod (nostruct-align/119l.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.734854
/projects/compbio/experiments/models.97/pdb/1e/1ew2A/nostruct-align/1ew2A.t2k-w0.5.mod(21):  Reading nostruct-align/1ew2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew2A/nostruct-align/1ew2A.t2k-w0.5.mod (nostruct-align/1ew2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ew2A/nostruct-align/1ew2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.078873
/projects/compbio/experiments/models.97/pdb/3h/3hmgA/nostruct-align/3hmgA.t2k-w0.5.mod(21):  Reading nostruct-align/3hmgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-4982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3h/3hmgA/nostruct-align/3hmgA.t2k-w0.5.mod (nostruct-align/3hmgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3h/3hmgA/nostruct-align/3hmgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.985876
/projects/compbio/experiments/models.97/pdb/3h/3hmgB/nostruct-align/3hmgB.t2k-w0.5.mod(21):  Reading nostruct-align/3hmgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-30166/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3h/3hmgB/nostruct-align/3hmgB.t2k-w0.5.mod (nostruct-align/3hmgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3h/3hmgB/nostruct-align/3hmgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.318878
/projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t2k-w0.5.mod(22):  Reading nostruct-align/1lbeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-7534/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t2k-w0.5.mod (nostruct-align/1lbeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.700859
/projects/compbio/experiments/models.97/pdb/1j/1jqcA/nostruct-align/1jqcA.t2k-w0.5.mod(22):  Reading nostruct-align/1jqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2477/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqcA/nostruct-align/1jqcA.t2k-w0.5.mod (nostruct-align/1jqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jqcA/nostruct-align/1jqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.070868
/projects/compbio/experiments/models.97/pdb/1a/1a64A/nostruct-align/1a64A.t2k-w0.5.mod(21):  Reading nostruct-align/1a64A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a64A/nostruct-align/1a64A.t2k-w0.5.mod (nostruct-align/1a64A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a64A/nostruct-align/1a64A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.010897
/projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t2k-w0.5.mod(22):  Reading nostruct-align/1egaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3124/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t2k-w0.5.mod (nostruct-align/1egaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.137871
/projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t2k-w0.5.mod(21):  Reading nostruct-align/2fn2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-16689/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t2k-w0.5.mod (nostruct-align/2fn2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.001875
/projects/compbio/experiments/models.97/pdb/1h/1hqoA/nostruct-align/1hqoA.t2k-w0.5.mod(22):  Reading nostruct-align/1hqoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28932/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqoA/nostruct-align/1hqoA.t2k-w0.5.mod (nostruct-align/1hqoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hqoA/nostruct-align/1hqoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.400911
/projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t2k-w0.5.mod(22):  Reading nostruct-align/1s01.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-2155/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t2k-w0.5.mod (nostruct-align/1s01.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.359869
/projects/compbio/experiments/models.97/pdb/1i/1imuA/nostruct-align/1imuA.t2k-w0.5.mod(21):  Reading nostruct-align/1imuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-8056/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1imuA/nostruct-align/1imuA.t2k-w0.5.mod (nostruct-align/1imuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1imuA/nostruct-align/1imuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.161892
/projects/compbio/experiments/models.97/pdb/1d/1dyoA/nostruct-align/1dyoA.t2k-w0.5.mod(22):  Reading nostruct-align/1dyoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-12148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyoA/nostruct-align/1dyoA.t2k-w0.5.mod (nostruct-align/1dyoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dyoA/nostruct-align/1dyoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.398876
/projects/compbio/experiments/models.97/pdb/1c/1c4kA/nostruct-align/1c4kA.t2k-w0.5.mod(22):  Reading nostruct-align/1c4kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31669/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4kA/nostruct-align/1c4kA.t2k-w0.5.mod (nostruct-align/1c4kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c4kA/nostruct-align/1c4kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.137882
/projects/compbio/experiments/models.97/pdb/1g/1g3uA/nostruct-align/1g3uA.t2k-w0.5.mod(22):  Reading nostruct-align/1g3uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6624/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g3uA/nostruct-align/1g3uA.t2k-w0.5.mod (nostruct-align/1g3uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g3uA/nostruct-align/1g3uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.902857
/projects/compbio/experiments/models.97/pdb/1e/1ew3A/nostruct-align/1ew3A.t2k-w0.5.mod(21):  Reading nostruct-align/1ew3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-25263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew3A/nostruct-align/1ew3A.t2k-w0.5.mod (nostruct-align/1ew3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ew3A/nostruct-align/1ew3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.093904
/projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-w0.5.mod(22):  Reading nostruct-align/1tx4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-w0.5.mod (nostruct-align/1tx4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.054863
/projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t2k-w0.5.mod(21):  Reading nostruct-align/1ppbL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-10737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t2k-w0.5.mod (nostruct-align/1ppbL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.862856
/projects/compbio/experiments/models.97/pdb/1t/1tx4B/nostruct-align/1tx4B.t2k-w0.5.mod(22):  Reading nostruct-align/1tx4B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14562/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tx4B/nostruct-align/1tx4B.t2k-w0.5.mod (nostruct-align/1tx4B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tx4B/nostruct-align/1tx4B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.433903
/projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-w0.5.mod(22):  Reading nostruct-align/1d0qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-2146/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-w0.5.mod (nostruct-align/1d0qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.784853
/projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t2k-w0.5.mod(21):  Reading nostruct-align/1qu0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-16928/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t2k-w0.5.mod (nostruct-align/1qu0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.329891
/projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t2k-w0.5.mod(22):  Reading nostruct-align/2sqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-2813/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t2k-w0.5.mod (nostruct-align/2sqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.009859
/projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t2k-w0.5.mod(21):  Reading nostruct-align/1ai7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t2k-w0.5.mod (nostruct-align/1ai7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.257900
/projects/compbio/experiments/models.97/pdb/1h/1h7dA/nostruct-align/1h7dA.t2k-w0.5.mod(21):  Reading nostruct-align/1h7dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30130/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7dA/nostruct-align/1h7dA.t2k-w0.5.mod (nostruct-align/1h7dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7dA/nostruct-align/1h7dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.598875
/projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t2k-w0.5.mod(21):  Reading nostruct-align/1a65A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-31768/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t2k-w0.5.mod (nostruct-align/1a65A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.653893
/projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t2k-w0.5.mod(21):  Reading nostruct-align/2fmr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20289/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t2k-w0.5.mod (nostruct-align/2fmr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.275852
/projects/compbio/experiments/models.97/pdb/1i/1i3jA/nostruct-align/1i3jA.t2k-w0.5.mod(22):  Reading nostruct-align/1i3jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-2839/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3jA/nostruct-align/1i3jA.t2k-w0.5.mod (nostruct-align/1i3jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i3jA/nostruct-align/1i3jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.731882
/projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t2k-w0.5.mod(21):  Reading nostruct-align/2bidA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-11139/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t2k-w0.5.mod (nostruct-align/2bidA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.616890
/projects/compbio/experiments/models.97/pdb/1f/1fchA/nostruct-align/1fchA.t2k-w0.5.mod(21):  Reading nostruct-align/1fchA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-4487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fchA/nostruct-align/1fchA.t2k-w0.5.mod (nostruct-align/1fchA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fchA/nostruct-align/1fchA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -34.379910
/projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k-w0.5.mod(22):  Reading nostruct-align/1jd0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-21085/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k-w0.5.mod (nostruct-align/1jd0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jd0A/nostruct-align/1jd0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.182863
/projects/compbio/experiments/models.97/pdb/1y/1ycsA/nostruct-align/1ycsA.t2k-w0.5.mod(21):  Reading nostruct-align/1ycsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-31910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycsA/nostruct-align/1ycsA.t2k-w0.5.mod (nostruct-align/1ycsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ycsA/nostruct-align/1ycsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.742876
/projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t2k-w0.5.mod(21):  Reading nostruct-align/1ycsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t2k-w0.5.mod (nostruct-align/1ycsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.319889
/projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t2k-w0.5.mod(21):  Reading nostruct-align/1udiI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-32195/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t2k-w0.5.mod (nostruct-align/1udiI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.586885
/projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-32503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t2k-w0.5.mod (nostruct-align/1b8fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.152899
/projects/compbio/experiments/models.97/pdb/1f/1fjrA/nostruct-align/1fjrA.t2k-w0.5.mod(22):  Reading nostruct-align/1fjrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21061/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjrA/nostruct-align/1fjrA.t2k-w0.5.mod (nostruct-align/1fjrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjrA/nostruct-align/1fjrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.161879
/projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-w0.5.mod(22):  Reading nostruct-align/1fl0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-w0.5.mod (nostruct-align/1fl0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fl0A/nostruct-align/1fl0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.647909
/projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-w0.5.mod(22):  Reading nostruct-align/1dypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-w0.5.mod (nostruct-align/1dypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dypA/nostruct-align/1dypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.934877
/projects/compbio/experiments/models.97/pdb/1j/1j6zA/nostruct-align/1j6zA.t2k-w0.5.mod(22):  Reading nostruct-align/1j6zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j6zA/nostruct-align/1j6zA.t2k-w0.5.mod (nostruct-align/1j6zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j6zA/nostruct-align/1j6zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.401903
/projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t2k-w0.5.mod(22):  Reading nostruct-align/1rhoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-32071/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t2k-w0.5.mod (nostruct-align/1rhoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.930897
/projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t2k-w0.5.mod(22):  Reading nostruct-align/1rhoC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29103/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t2k-w0.5.mod (nostruct-align/1rhoC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.866899
/projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-w0.5.mod(22):  Reading nostruct-align/1euvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7980/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-w0.5.mod (nostruct-align/1euvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1euvA/nostruct-align/1euvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.679863
/projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-w0.5.mod(22):  Reading nostruct-align/1ew4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12129/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-w0.5.mod (nostruct-align/1ew4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ew4A/nostruct-align/1ew4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.305882
/projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t2k-w0.5.mod(21):  Reading nostruct-align/1dctA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t2k-w0.5.mod (nostruct-align/1dctA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.294910
/projects/compbio/experiments/models.97/pdb/1e/1euvB/nostruct-align/1euvB.t2k-w0.5.mod(22):  Reading nostruct-align/1euvB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16919/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euvB/nostruct-align/1euvB.t2k-w0.5.mod (nostruct-align/1euvB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1euvB/nostruct-align/1euvB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.254896
/projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t2k-w0.5.mod(21):  Reading nostruct-align/1bt0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-5873/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t2k-w0.5.mod (nostruct-align/1bt0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.335907
/projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t2k-w0.5.mod(21):  Reading nostruct-align/1qu1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-28116/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t2k-w0.5.mod (nostruct-align/1qu1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.998901
/projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t2k-w0.5.mod(22):  Reading nostruct-align/1npoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t2k-w0.5.mod (nostruct-align/1npoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.637859
/projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t2k-w0.5.mod(21):  Reading nostruct-align/1npoC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10675/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t2k-w0.5.mod (nostruct-align/1npoC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.598885
/projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-w0.5.mod(22):  Reading nostruct-align/1fyeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-w0.5.mod (nostruct-align/1fyeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fyeA/nostruct-align/1fyeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.192902
/projects/compbio/experiments/models.97/pdb/1h/1h7eA/nostruct-align/1h7eA.t2k-w0.5.mod(22):  Reading nostruct-align/1h7eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16987/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7eA/nostruct-align/1h7eA.t2k-w0.5.mod (nostruct-align/1h7eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7eA/nostruct-align/1h7eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.485868
/projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-w0.5.mod(22):  Reading nostruct-align/3htsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1790/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-w0.5.mod (nostruct-align/3htsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.158903
/projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t2k-w0.5.mod(21):  Reading nostruct-align/8kme2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-19745/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t2k-w0.5.mod (nostruct-align/8kme2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.191883
/projects/compbio/experiments/models.97/pdb/1j/1jd1A/nostruct-align/1jd1A.t2k-w0.5.mod(22):  Reading nostruct-align/1jd1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jd1A/nostruct-align/1jd1A.t2k-w0.5.mod (nostruct-align/1jd1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jd1A/nostruct-align/1jd1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.496872
/projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t2k-w0.5.mod(22):  Reading nostruct-align/1aocA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-9982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t2k-w0.5.mod (nostruct-align/1aocA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.106869
/projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t2k-w0.5.mod(21):  Reading nostruct-align/1b8gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-32374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t2k-w0.5.mod (nostruct-align/1b8gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.964876
/projects/compbio/experiments/models.97/pdb/1f/1fjsA/nostruct-align/1fjsA.t2k-w0.5.mod(21):  Reading nostruct-align/1fjsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjsA/nostruct-align/1fjsA.t2k-w0.5.mod (nostruct-align/1fjsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjsA/nostruct-align/1fjsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.082905
/projects/compbio/experiments/models.97/pdb/1f/1fl1A/nostruct-align/1fl1A.t2k-w0.5.mod(21):  Reading nostruct-align/1fl1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14413/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fl1A/nostruct-align/1fl1A.t2k-w0.5.mod (nostruct-align/1fl1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fl1A/nostruct-align/1fl1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.095898
/projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k-w0.5.mod(21):  Reading nostruct-align/1dyqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-14088/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k-w0.5.mod (nostruct-align/1dyqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dyqA/nostruct-align/1dyqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.383900
/projects/compbio/experiments/models.97/pdb/1j/1jic/nostruct-align/1jic.t2k-w0.5.mod(21):  Reading nostruct-align/1jic.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jic/nostruct-align/1jic.t2k-w0.5.mod (nostruct-align/1jic.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jic/nostruct-align/1jic.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.623857
/projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t2k-w0.5.mod(21):  Reading nostruct-align/1avmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-19626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t2k-w0.5.mod (nostruct-align/1avmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.819851
/projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-w0.5.mod(22):  Reading nostruct-align/1euwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16448/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-w0.5.mod (nostruct-align/1euwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1euwA/nostruct-align/1euwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.066904
/projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-w0.5.mod(22):  Reading nostruct-align/1g55A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12019/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-w0.5.mod (nostruct-align/1g55A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g55A/nostruct-align/1g55A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.588900
/projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-w0.5.mod(22):  Reading nostruct-align/1tvxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3133/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-w0.5.mod (nostruct-align/1tvxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.319853
/projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t2k-w0.5.mod(21):  Reading nostruct-align/1tvxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3506/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t2k-w0.5.mod (nostruct-align/1tvxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.393898
/projects/compbio/experiments/models.97/pdb/1d/1d0sA/nostruct-align/1d0sA.t2k-w0.5.mod(21):  Reading nostruct-align/1d0sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0sA/nostruct-align/1d0sA.t2k-w0.5.mod (nostruct-align/1d0sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0sA/nostruct-align/1d0sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.703886
/projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t2k-w0.5.mod(22):  Reading nostruct-align/1xvaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t2k-w0.5.mod (nostruct-align/1xvaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.428864
/projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t2k-w0.5.mod(21):  Reading nostruct-align/1qu2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2297/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t2k-w0.5.mod (nostruct-align/1qu2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.825890
/projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-w0.5.mod(22):  Reading nostruct-align/1qstA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-21141/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-w0.5.mod (nostruct-align/1qstA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qstA/nostruct-align/1qstA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.851896
/projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t2k-w0.5.mod(21):  Reading nostruct-align/1ca1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-15470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t2k-w0.5.mod (nostruct-align/1ca1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.195871
/projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t2k-w0.5.mod(21):  Reading nostruct-align/1brsD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12019/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t2k-w0.5.mod (nostruct-align/1brsD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.189898
/projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t2k-w0.5.mod(21):  Reading nostruct-align/1parA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t2k-w0.5.mod (nostruct-align/1parA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.824909
/projects/compbio/experiments/models.97/pdb/1f/1fjsL/nostruct-align/1fjsL.t2k-w0.5.mod(22):  Reading nostruct-align/1fjsL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7393/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fjsL/nostruct-align/1fjsL.t2k-w0.5.mod (nostruct-align/1fjsL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fjsL/nostruct-align/1fjsL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.476898
/projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t2k-w0.5.mod(21):  Reading nostruct-align/1yrgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t2k-w0.5.mod (nostruct-align/1yrgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.105873
/projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t2k-w0.5.mod(21):  Reading nostruct-align/1yrgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-12518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t2k-w0.5.mod (nostruct-align/1yrgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.156902
/projects/compbio/experiments/models.97/pdb/9a/9atcB/nostruct-align/9atcB.t2k-w0.5.mod(21):  Reading nostruct-align/9atcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-10495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9a/9atcB/nostruct-align/9atcB.t2k-w0.5.mod (nostruct-align/9atcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9a/9atcB/nostruct-align/9atcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.772890
/projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t2k-w0.5.mod(22):  Reading nostruct-align/1a4yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t2k-w0.5.mod (nostruct-align/1a4yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.343868
/projects/compbio/experiments/models.97/pdb/1e/1egdA/nostruct-align/1egdA.t2k-w0.5.mod(21):  Reading nostruct-align/1egdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-27054/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egdA/nostruct-align/1egdA.t2k-w0.5.mod (nostruct-align/1egdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egdA/nostruct-align/1egdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.260910
/projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t2k-w0.5.mod(21):  Reading nostruct-align/1jxpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-18943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t2k-w0.5.mod (nostruct-align/1jxpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.331905
/projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t2k-w0.5.mod(21):  Reading nostruct-align/2tmkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14493/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t2k-w0.5.mod (nostruct-align/2tmkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.947866
/projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t2k-w0.5.mod(21):  Reading nostruct-align/1theA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-17567/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t2k-w0.5.mod (nostruct-align/1theA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.303886
/projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t2k-w0.5.mod(21):  Reading nostruct-align/1a4yB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-12900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t2k-w0.5.mod (nostruct-align/1a4yB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.328892
/projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t2k-w0.5.mod(21):  Reading nostruct-align/1theB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10589/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t2k-w0.5.mod (nostruct-align/1theB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.319893
/projects/compbio/experiments/models.97/pdb/1f/1fcjA/nostruct-align/1fcjA.t2k-w0.5.mod(21):  Reading nostruct-align/1fcjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-20094/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcjA/nostruct-align/1fcjA.t2k-w0.5.mod (nostruct-align/1fcjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fcjA/nostruct-align/1fcjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.914858
/projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t2k-w0.5.mod(21):  Reading nostruct-align/2fow.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-11565/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t2k-w0.5.mod (nostruct-align/2fow.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.847853
/projects/compbio/experiments/models.97/pdb/2f/2fox/nostruct-align/2fox.t2k-w0.5.mod(21):  Reading nostruct-align/2fox.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2887/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fox/nostruct-align/2fox.t2k-w0.5.mod (nostruct-align/2fox.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fox/nostruct-align/2fox.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.409853
/projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t2k-w0.5.mod(21):  Reading nostruct-align/2myo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t2k-w0.5.mod (nostruct-align/2myo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.275867
/projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t2k-w0.5.mod(21):  Reading nostruct-align/2atjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-9829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t2k-w0.5.mod (nostruct-align/2atjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.484854
/projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t2k-w0.5.mod(21):  Reading nostruct-align/1bkjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-18316/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t2k-w0.5.mod (nostruct-align/1bkjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.641895
/projects/compbio/experiments/models.97/pdb/1f/1fl2A/nostruct-align/1fl2A.t2k-w0.5.mod(21):  Reading nostruct-align/1fl2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-536/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fl2A/nostruct-align/1fl2A.t2k-w0.5.mod (nostruct-align/1fl2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fl2A/nostruct-align/1fl2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.832855
/projects/compbio/experiments/models.97/pdb/1g/1gh8A/nostruct-align/1gh8A.t2k-w0.5.mod(21):  Reading nostruct-align/1gh8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh8A/nostruct-align/1gh8A.t2k-w0.5.mod (nostruct-align/1gh8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gh8A/nostruct-align/1gh8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.313875
/projects/compbio/experiments/models.97/pdb/1p/1ppeI/nostruct-align/1ppeI.t2k-w0.5.mod(21):  Reading nostruct-align/1ppeI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-29211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppeI/nostruct-align/1ppeI.t2k-w0.5.mod (nostruct-align/1ppeI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ppeI/nostruct-align/1ppeI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.888891
/projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-w0.5.mod(22):  Reading nostruct-align/1ew6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-w0.5.mod (nostruct-align/1ew6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ew6A/nostruct-align/1ew6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.115896
/projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-w0.5.mod(22):  Reading nostruct-align/1iuaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-w0.5.mod (nostruct-align/1iuaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iuaA/nostruct-align/1iuaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.642859
/projects/compbio/experiments/models.97/pdb/1e/1ew6B/nostruct-align/1ew6B.t2k-w0.5.mod(21):  Reading nostruct-align/1ew6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-32551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ew6B/nostruct-align/1ew6B.t2k-w0.5.mod (nostruct-align/1ew6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ew6B/nostruct-align/1ew6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.115896
/projects/compbio/experiments/models.97/pdb/2i/2izgB/nostruct-align/2izgB.t2k-w0.5.mod(21):  Reading nostruct-align/2izgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-11854/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2izgB/nostruct-align/2izgB.t2k-w0.5.mod (nostruct-align/2izgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2izgB/nostruct-align/2izgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.058897
/projects/compbio/experiments/models.97/pdb/1q/1qsuA/nostruct-align/1qsuA.t2k-w0.5.mod(22):  Reading nostruct-align/1qsuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qsuA/nostruct-align/1qsuA.t2k-w0.5.mod (nostruct-align/1qsuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qsuA/nostruct-align/1qsuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.450880
/projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-w0.5.mod(21):  Reading nostruct-align/1cnzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22255/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-w0.5.mod (nostruct-align/1cnzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.661909
/projects/compbio/experiments/models.97/pdb/1k/1kmmA/nostruct-align/1kmmA.t2k-w0.5.mod(22):  Reading nostruct-align/1kmmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-6256/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmmA/nostruct-align/1kmmA.t2k-w0.5.mod (nostruct-align/1kmmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kmmA/nostruct-align/1kmmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.366867
/projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t2k-w0.5.mod(21):  Reading nostruct-align/1gumA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-14860/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t2k-w0.5.mod (nostruct-align/1gumA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.571896
/projects/compbio/experiments/models.97/pdb/1m/1meyC/nostruct-align/1meyC.t2k-w0.5.mod(22):  Reading nostruct-align/1meyC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2851/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1meyC/nostruct-align/1meyC.t2k-w0.5.mod (nostruct-align/1meyC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1meyC/nostruct-align/1meyC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -37.746861
/projects/compbio/experiments/models.97/pdb/1k/1kv5A/nostruct-align/1kv5A.t2k-w0.5.mod(22):  Reading nostruct-align/1kv5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv5A/nostruct-align/1kv5A.t2k-w0.5.mod (nostruct-align/1kv5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kv5A/nostruct-align/1kv5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.848909
/projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-w0.5.mod(22):  Reading nostruct-align/1thfD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9136/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-w0.5.mod (nostruct-align/1thfD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thfD/nostruct-align/1thfD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.288891
/projects/compbio/experiments/models.97/pdb/1f/1f0iA/nostruct-align/1f0iA.t2k-w0.5.mod(22):  Reading nostruct-align/1f0iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0iA/nostruct-align/1f0iA.t2k-w0.5.mod (nostruct-align/1f0iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0iA/nostruct-align/1f0iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.618910
/projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-w0.5.mod(22):  Reading nostruct-align/1hqsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-w0.5.mod (nostruct-align/1hqsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hqsA/nostruct-align/1hqsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.731878
/projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k-w0.5.mod(21):  Reading nostruct-align/1aoeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k-w0.5.mod (nostruct-align/1aoeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.135902
/projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-w0.5.mod(21):  Reading nostruct-align/1io7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-8584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-w0.5.mod (nostruct-align/1io7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1io7A/nostruct-align/1io7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.312906
/projects/compbio/experiments/models.97/pdb/1j/1jbuH/nostruct-align/1jbuH.t2k-w0.5.mod(22):  Reading nostruct-align/1jbuH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12213/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbuH/nostruct-align/1jbuH.t2k-w0.5.mod (nostruct-align/1jbuH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jbuH/nostruct-align/1jbuH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.346909
/projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t2k-w0.5.mod(21):  Reading nostruct-align/1caj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-8717/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t2k-w0.5.mod (nostruct-align/1caj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.655886
/projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t2k-w0.5.mod(21):  Reading nostruct-align/1ppfE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-24469/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t2k-w0.5.mod (nostruct-align/1ppfE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.683853
/projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k-w0.5.mod(22):  Reading nostruct-align/1dysA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k-w0.5.mod (nostruct-align/1dysA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dysA/nostruct-align/1dysA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.328905
/projects/compbio/experiments/models.97/pdb/1f/1f7sA/nostruct-align/1f7sA.t2k-w0.5.mod(22):  Reading nostruct-align/1f7sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31282/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7sA/nostruct-align/1f7sA.t2k-w0.5.mod (nostruct-align/1f7sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f7sA/nostruct-align/1f7sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.611855
/projects/compbio/experiments/models.97/pdb/1j/1jbuL/nostruct-align/1jbuL.t2k-w0.5.mod(22):  Reading nostruct-align/1jbuL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3056/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbuL/nostruct-align/1jbuL.t2k-w0.5.mod (nostruct-align/1jbuL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jbuL/nostruct-align/1jbuL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.574898
/projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-w0.5.mod(22):  Reading nostruct-align/1e4cP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13039/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-w0.5.mod (nostruct-align/1e4cP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4cP/nostruct-align/1e4cP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.580854
/projects/compbio/experiments/models.97/pdb/1c/1c4oA/nostruct-align/1c4oA.t2k-w0.5.mod(22):  Reading nostruct-align/1c4oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-25531/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4oA/nostruct-align/1c4oA.t2k-w0.5.mod (nostruct-align/1c4oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c4oA/nostruct-align/1c4oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.973904
/projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t2k-w0.5.mod(22):  Reading nostruct-align/1avoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-10885/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t2k-w0.5.mod (nostruct-align/1avoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.749891
/projects/compbio/experiments/models.97/pdb/1g/1gh9A/nostruct-align/1gh9A.t2k-w0.5.mod(21):  Reading nostruct-align/1gh9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-452/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gh9A/nostruct-align/1gh9A.t2k-w0.5.mod (nostruct-align/1gh9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gh9A/nostruct-align/1gh9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.483891
/projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t2k-w0.5.mod(22):  Reading nostruct-align/1avoB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22083/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t2k-w0.5.mod (nostruct-align/1avoB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.076870
/projects/compbio/experiments/models.97/pdb/1g/1g57A/nostruct-align/1g57A.t2k-w0.5.mod(22):  Reading nostruct-align/1g57A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18628/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g57A/nostruct-align/1g57A.t2k-w0.5.mod (nostruct-align/1g57A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g57A/nostruct-align/1g57A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.732880
/projects/compbio/experiments/models.97/pdb/1k/1k3bA/nostruct-align/1k3bA.t2k-w0.5.mod(22):  Reading nostruct-align/1k3bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3bA/nostruct-align/1k3bA.t2k-w0.5.mod (nostruct-align/1k3bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k3bA/nostruct-align/1k3bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.760881
/projects/compbio/experiments/models.97/pdb/1d/1de5A/nostruct-align/1de5A.t2k-w0.5.mod(21):  Reading nostruct-align/1de5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1de5A/nostruct-align/1de5A.t2k-w0.5.mod (nostruct-align/1de5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1de5A/nostruct-align/1de5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.574875
/projects/compbio/experiments/models.97/pdb/1k/1k3bB/nostruct-align/1k3bB.t2k-w0.5.mod(22):  Reading nostruct-align/1k3bB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3bB/nostruct-align/1k3bB.t2k-w0.5.mod (nostruct-align/1k3bB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k3bB/nostruct-align/1k3bB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.150908
/projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t2k-w0.5.mod(21):  Reading nostruct-align/2izhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-7879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t2k-w0.5.mod (nostruct-align/2izhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.285852
/projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t2k-w0.5.mod(21):  Reading nostruct-align/1bt3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t2k-w0.5.mod (nostruct-align/1bt3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.989853
/projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t2k-w0.5.mod(21):  Reading nostruct-align/1que.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t2k-w0.5.mod (nostruct-align/1que.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.757854
/projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t2k-w0.5.mod(22):  Reading nostruct-align/1cc5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28850/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t2k-w0.5.mod (nostruct-align/1cc5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.855869
/projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t2k-w0.5.mod(21):  Reading nostruct-align/2ucz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2150/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t2k-w0.5.mod (nostruct-align/2ucz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.289886
/projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t2k-w0.5.mod(21):  Reading nostruct-align/1slaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-7652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t2k-w0.5.mod (nostruct-align/1slaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.660891
/projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t2k-w0.5.mod(22):  Reading nostruct-align/1kmnD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-22039/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t2k-w0.5.mod (nostruct-align/1kmnD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.533882
/projects/compbio/experiments/models.97/pdb/1f/1fyhA/nostruct-align/1fyhA.t2k-w0.5.mod(22):  Reading nostruct-align/1fyhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyhA/nostruct-align/1fyhA.t2k-w0.5.mod (nostruct-align/1fyhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fyhA/nostruct-align/1fyhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.904911
/projects/compbio/experiments/models.97/pdb/1f/1fyhB/nostruct-align/1fyhB.t2k-w0.5.mod(21):  Reading nostruct-align/1fyhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-14552/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyhB/nostruct-align/1fyhB.t2k-w0.5.mod (nostruct-align/1fyhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fyhB/nostruct-align/1fyhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.857855
/projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t2k-w0.5.mod(21):  Reading nostruct-align/1jkw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22666/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t2k-w0.5.mod (nostruct-align/1jkw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.959911
/projects/compbio/experiments/models.97/pdb/1f/1f0jA/nostruct-align/1f0jA.t2k-w0.5.mod(22):  Reading nostruct-align/1f0jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0jA/nostruct-align/1f0jA.t2k-w0.5.mod (nostruct-align/1f0jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0jA/nostruct-align/1f0jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.821905
/projects/compbio/experiments/models.97/pdb/1g/1ga0A/nostruct-align/1ga0A.t2k-w0.5.mod(21):  Reading nostruct-align/1ga0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22226/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga0A/nostruct-align/1ga0A.t2k-w0.5.mod (nostruct-align/1ga0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ga0A/nostruct-align/1ga0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.648901
/projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t2k-w0.5.mod(22):  Reading nostruct-align/1cbf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-2599/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t2k-w0.5.mod (nostruct-align/1cbf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.833891
/projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t2k-w0.5.mod(21):  Reading nostruct-align/1cbg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-31753/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t2k-w0.5.mod (nostruct-align/1cbg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.459900
/projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t2k-w0.5.mod(21):  Reading nostruct-align/1cbh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-32110/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t2k-w0.5.mod (nostruct-align/1cbh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.343876
/projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t2k-w0.5.mod(22):  Reading nostruct-align/1qlmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18823/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t2k-w0.5.mod (nostruct-align/1qlmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.112877
/projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20562/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t2k-w0.5.mod (nostruct-align/1b8jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.968868
/projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-w0.5.mod(21):  Reading nostruct-align/1dytA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-17587/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-w0.5.mod (nostruct-align/1dytA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dytA/nostruct-align/1dytA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.106869
/projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t2k-w0.5.mod(21):  Reading nostruct-align/1ci0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-32668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t2k-w0.5.mod (nostruct-align/1ci0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.941904
/projects/compbio/experiments/models.97/pdb/7p/7pti/nostruct-align/7pti.t2k-w0.5.mod(21):  Reading nostruct-align/7pti.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-2060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7p/7pti/nostruct-align/7pti.t2k-w0.5.mod (nostruct-align/7pti.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7p/7pti/nostruct-align/7pti.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.566908
/projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t2k-w0.5.mod(22):  Reading nostruct-align/1avpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-9854/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t2k-w0.5.mod (nostruct-align/1avpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.499897
/projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t2k-w0.5.mod(21):  Reading nostruct-align/1cbn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-12473/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t2k-w0.5.mod (nostruct-align/1cbn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.463871
/projects/compbio/experiments/models.97/pdb/1d/1de6A/nostruct-align/1de6A.t2k-w0.5.mod(21):  Reading nostruct-align/1de6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11172/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1de6A/nostruct-align/1de6A.t2k-w0.5.mod (nostruct-align/1de6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1de6A/nostruct-align/1de6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.586893
/projects/compbio/experiments/models.97/pdb/1b/1bt4A/nostruct-align/1bt4A.t2k-w0.5.mod(21):  Reading nostruct-align/1bt4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-25933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bt4A/nostruct-align/1bt4A.t2k-w0.5.mod (nostruct-align/1bt4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bt4A/nostruct-align/1bt4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.647909
/projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t2k-w0.5.mod(21):  Reading nostruct-align/1d0vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t2k-w0.5.mod (nostruct-align/1d0vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.786877
/projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t2k-w0.5.mod(21):  Reading nostruct-align/1jli.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19528/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t2k-w0.5.mod (nostruct-align/1jli.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.019905
/projects/compbio/experiments/models.97/pdb/2m/2mysB/nostruct-align/2mysB.t2k-w0.5.mod(21):  Reading nostruct-align/2mysB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12944/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mysB/nostruct-align/2mysB.t2k-w0.5.mod (nostruct-align/2mysB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mysB/nostruct-align/2mysB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.354889
/projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t2k-w0.5.mod(21):  Reading nostruct-align/1qu5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-17720/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t2k-w0.5.mod (nostruct-align/1qu5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.043863
/projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t2k-w0.5.mod(21):  Reading nostruct-align/1cbs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13954/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t2k-w0.5.mod (nostruct-align/1cbs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.175854
/projects/compbio/experiments/models.97/pdb/1j/1jqiA/nostruct-align/1jqiA.t2k-w0.5.mod(22):  Reading nostruct-align/1jqiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-1864/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqiA/nostruct-align/1jqiA.t2k-w0.5.mod (nostruct-align/1jqiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jqiA/nostruct-align/1jqiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.994858
/projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t2k-w0.5.mod(21):  Reading nostruct-align/1pauA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-31084/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t2k-w0.5.mod (nostruct-align/1pauA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.443886
/projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t2k-w0.5.mod(21):  Reading nostruct-align/1pauB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-24159/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t2k-w0.5.mod (nostruct-align/1pauB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.514853
/projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-w0.5.mod(22):  Reading nostruct-align/1npsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-w0.5.mod (nostruct-align/1npsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.156874
/projects/compbio/experiments/models.97/pdb/1k/1kmoA/nostruct-align/1kmoA.t2k-w0.5.mod(22):  Reading nostruct-align/1kmoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20613/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kmoA/nostruct-align/1kmoA.t2k-w0.5.mod (nostruct-align/1kmoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kmoA/nostruct-align/1kmoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.438898
/projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t2k-w0.5.mod(22):  Reading nostruct-align/1cby.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14696/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t2k-w0.5.mod (nostruct-align/1cby.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.255852
/projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t2k-w0.5.mod(21):  Reading nostruct-align/1cd8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t2k-w0.5.mod (nostruct-align/1cd8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.249895
/projects/compbio/experiments/models.97/pdb/1l/1l6sA/nostruct-align/1l6sA.t2k-w0.5.mod(22):  Reading nostruct-align/1l6sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6sA/nostruct-align/1l6sA.t2k-w0.5.mod (nostruct-align/1l6sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l6sA/nostruct-align/1l6sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.839867
/projects/compbio/experiments/models.97/pdb/1e/1eggA/nostruct-align/1eggA.t2k-w0.5.mod(21):  Reading nostruct-align/1eggA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10816/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eggA/nostruct-align/1eggA.t2k-w0.5.mod (nostruct-align/1eggA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eggA/nostruct-align/1eggA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.005892
/projects/compbio/experiments/models.97/pdb/1i/1ifqA/nostruct-align/1ifqA.t2k-w0.5.mod(22):  Reading nostruct-align/1ifqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ifqA/nostruct-align/1ifqA.t2k-w0.5.mod (nostruct-align/1ifqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ifqA/nostruct-align/1ifqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.698889
/projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-w0.5.mod(22):  Reading nostruct-align/1kv7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-16299/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-w0.5.mod (nostruct-align/1kv7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kv7A/nostruct-align/1kv7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.303890
/projects/compbio/experiments/models.97/pdb/1f/1f0kA/nostruct-align/1f0kA.t2k-w0.5.mod(21):  Reading nostruct-align/1f0kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-11497/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0kA/nostruct-align/1f0kA.t2k-w0.5.mod (nostruct-align/1f0kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0kA/nostruct-align/1f0kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.354897
/projects/compbio/experiments/models.97/pdb/1j/1jbwA/nostruct-align/1jbwA.t2k-w0.5.mod(22):  Reading nostruct-align/1jbwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31831/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jbwA/nostruct-align/1jbwA.t2k-w0.5.mod (nostruct-align/1jbwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jbwA/nostruct-align/1jbwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.907887
/projects/compbio/experiments/models.97/pdb/1j/1jd5A/nostruct-align/1jd5A.t2k-w0.5.mod(22):  Reading nostruct-align/1jd5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jd5A/nostruct-align/1jd5A.t2k-w0.5.mod (nostruct-align/1jd5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jd5A/nostruct-align/1jd5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.811903
/projects/compbio/experiments/models.97/pdb/2t/2tmnE/nostruct-align/2tmnE.t2k-w0.5.mod(21):  Reading nostruct-align/2tmnE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-8310/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmnE/nostruct-align/2tmnE.t2k-w0.5.mod (nostruct-align/2tmnE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tmnE/nostruct-align/2tmnE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.586897
/projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t2k-w0.5.mod(22):  Reading nostruct-align/4fgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-24958/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t2k-w0.5.mod (nostruct-align/4fgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.044868
/projects/compbio/experiments/models.97/pdb/1a/1aogA/nostruct-align/1aogA.t2k-w0.5.mod(21):  Reading nostruct-align/1aogA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-30570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aogA/nostruct-align/1aogA.t2k-w0.5.mod (nostruct-align/1aogA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aogA/nostruct-align/1aogA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.215878
/projects/compbio/experiments/models.97/pdb/1g/1ga1A/nostruct-align/1ga1A.t2k-w0.5.mod(21):  Reading nostruct-align/1ga1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-18147/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga1A/nostruct-align/1ga1A.t2k-w0.5.mod (nostruct-align/1ga1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ga1A/nostruct-align/1ga1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.778894
/projects/compbio/experiments/models.97/pdb/1c/1ccg/nostruct-align/1ccg.t2k-w0.5.mod(21):  Reading nostruct-align/1ccg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-23461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccg/nostruct-align/1ccg.t2k-w0.5.mod (nostruct-align/1ccg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ccg/nostruct-align/1ccg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.166893
/projects/compbio/experiments/models.97/pdb/1q/1qlnA/nostruct-align/1qlnA.t2k-w0.5.mod(22):  Reading nostruct-align/1qlnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-3289/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlnA/nostruct-align/1qlnA.t2k-w0.5.mod (nostruct-align/1qlnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlnA/nostruct-align/1qlnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.816906
/projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t2k-w0.5.mod (nostruct-align/1b8kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.725861
/projects/compbio/experiments/models.97/pdb/1f/1f93A/nostruct-align/1f93A.t2k-w0.5.mod(22):  Reading nostruct-align/1f93A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-7475/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f93A/nostruct-align/1f93A.t2k-w0.5.mod (nostruct-align/1f93A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f93A/nostruct-align/1f93A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.796909
/projects/compbio/experiments/models.97/pdb/1f/1f7uA/nostruct-align/1f7uA.t2k-w0.5.mod(21):  Reading nostruct-align/1f7uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-735/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7uA/nostruct-align/1f7uA.t2k-w0.5.mod (nostruct-align/1f7uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f7uA/nostruct-align/1f7uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.097887
/projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-w0.5.mod(22):  Reading nostruct-align/1c4qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6323/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-w0.5.mod (nostruct-align/1c4qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c4qA/nostruct-align/1c4qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.483898
/projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t2k-w0.5.mod(22):  Reading nostruct-align/1avqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t2k-w0.5.mod (nostruct-align/1avqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.442856
/projects/compbio/experiments/models.97/pdb/1f/1f93E/nostruct-align/1f93E.t2k-w0.5.mod(21):  Reading nostruct-align/1f93E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-17498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f93E/nostruct-align/1f93E.t2k-w0.5.mod (nostruct-align/1f93E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f93E/nostruct-align/1f93E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.802893
/projects/compbio/experiments/models.97/pdb/1g/1g59A/nostruct-align/1g59A.t2k-w0.5.mod(22):  Reading nostruct-align/1g59A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32739/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g59A/nostruct-align/1g59A.t2k-w0.5.mod (nostruct-align/1g59A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g59A/nostruct-align/1g59A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.594858
/projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t2k-w0.5.mod(22):  Reading nostruct-align/1brwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29616/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t2k-w0.5.mod (nostruct-align/1brwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.515854
/projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t2k-w0.5.mod(21):  Reading nostruct-align/1ccr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-22488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t2k-w0.5.mod (nostruct-align/1ccr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.648861
/projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t2k-w0.5.mod(22):  Reading nostruct-align/1wdcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t2k-w0.5.mod (nostruct-align/1wdcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.159870
/projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t2k-w0.5.mod(21):  Reading nostruct-align/1qu6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-1340/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t2k-w0.5.mod (nostruct-align/1qu6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.323895
/projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t2k-w0.5.mod(21):  Reading nostruct-align/1wdcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-18626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t2k-w0.5.mod (nostruct-align/1wdcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.666874
/projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t2k-w0.5.mod(21):  Reading nostruct-align/1mtnC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9656/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t2k-w0.5.mod (nostruct-align/1mtnC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.216871
/projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t2k-w0.5.mod(21):  Reading nostruct-align/1wdcC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-12315/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t2k-w0.5.mod (nostruct-align/1wdcC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.607853
/projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t2k-w0.5.mod(21):  Reading nostruct-align/2fsp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-13728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t2k-w0.5.mod (nostruct-align/2fsp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.736870
/projects/compbio/experiments/models.97/pdb/1g/1gupA/nostruct-align/1gupA.t2k-w0.5.mod(21):  Reading nostruct-align/1gupA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gupA/nostruct-align/1gupA.t2k-w0.5.mod (nostruct-align/1gupA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gupA/nostruct-align/1gupA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.564907
/projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k-w0.5.mod(21):  Reading nostruct-align/1xgsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k-w0.5.mod (nostruct-align/1xgsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.754864
/projects/compbio/experiments/models.97/pdb/1k/1kv8A/nostruct-align/1kv8A.t2k-w0.5.mod(22):  Reading nostruct-align/1kv8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6353/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kv8A/nostruct-align/1kv8A.t2k-w0.5.mod (nostruct-align/1kv8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kv8A/nostruct-align/1kv8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.663868
/projects/compbio/experiments/models.97/pdb/1k/1ktzB/nostruct-align/1ktzB.t2k-w0.5.mod(22):  Reading nostruct-align/1ktzB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4864/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktzB/nostruct-align/1ktzB.t2k-w0.5.mod (nostruct-align/1ktzB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ktzB/nostruct-align/1ktzB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.906862
/projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k-w0.5.mod(21):  Reading nostruct-align/1f0lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-18268/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k-w0.5.mod (nostruct-align/1f0lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0lA/nostruct-align/1f0lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.105896
/projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t2k-w0.5.mod(21):  Reading nostruct-align/1otcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-15731/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t2k-w0.5.mod (nostruct-align/1otcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.923899
/projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t2k-w0.5.mod(21):  Reading nostruct-align/1otcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t2k-w0.5.mod (nostruct-align/1otcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.502865
/projects/compbio/experiments/models.97/pdb/1h/1hqvA/nostruct-align/1hqvA.t2k-w0.5.mod(21):  Reading nostruct-align/1hqvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-5137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqvA/nostruct-align/1hqvA.t2k-w0.5.mod (nostruct-align/1hqvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hqvA/nostruct-align/1hqvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.541889
/projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t2k-w0.5.mod(21):  Reading nostruct-align/1nbaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-12746/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t2k-w0.5.mod (nostruct-align/1nbaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.035879
/projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-w0.5.mod(22):  Reading nostruct-align/1aohA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-14787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-w0.5.mod (nostruct-align/1aohA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.750860
/projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t2k-w0.5.mod(21):  Reading nostruct-align/1aohB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-30728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t2k-w0.5.mod (nostruct-align/1aohB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.656902
/projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ep0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-25849/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k-w0.5.mod (nostruct-align/1ep0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ep0A/nostruct-align/1ep0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.914888
/projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t2k-w0.5.mod(21):  Reading nostruct-align/1qloA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-18776/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t2k-w0.5.mod (nostruct-align/1qloA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.659882
/projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t2k-w0.5.mod(21):  Reading nostruct-align/1cdi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-13780/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t2k-w0.5.mod (nostruct-align/1cdi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.240898
/projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-w0.5.mod(22):  Reading nostruct-align/1f94A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17326/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-w0.5.mod (nostruct-align/1f94A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f94A/nostruct-align/1f94A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.012909
/projects/compbio/experiments/models.97/pdb/1c/1c4rA/nostruct-align/1c4rA.t2k-w0.5.mod(22):  Reading nostruct-align/1c4rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-8806/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4rA/nostruct-align/1c4rA.t2k-w0.5.mod (nostruct-align/1c4rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c4rA/nostruct-align/1c4rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.137880
/projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t2k-w0.5.mod(21):  Reading nostruct-align/1cdp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16294/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t2k-w0.5.mod (nostruct-align/1cdp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.995886
/projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t2k-w0.5.mod(21):  Reading nostruct-align/1cdq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25655/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t2k-w0.5.mod (nostruct-align/1cdq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.188873
/projects/compbio/experiments/models.97/pdb/1e/1e4fT/nostruct-align/1e4fT.t2k-w0.5.mod(22):  Reading nostruct-align/1e4fT.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4fT/nostruct-align/1e4fT.t2k-w0.5.mod (nostruct-align/1e4fT.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4fT/nostruct-align/1e4fT.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.086910
/projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t2k-w0.5.mod(21):  Reading nostruct-align/2lgsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-7617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t2k-w0.5.mod (nostruct-align/2lgsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.760864
/projects/compbio/experiments/models.97/pdb/1q/1qu7A/nostruct-align/1qu7A.t2k-w0.5.mod(22):  Reading nostruct-align/1qu7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21042/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu7A/nostruct-align/1qu7A.t2k-w0.5.mod (nostruct-align/1qu7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu7A/nostruct-align/1qu7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.137896
/projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t2k-w0.5.mod(21):  Reading nostruct-align/1cds.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-5027/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t2k-w0.5.mod (nostruct-align/1cds.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.188873
/projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t2k-w0.5.mod(21):  Reading nostruct-align/4blmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-9587/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t2k-w0.5.mod (nostruct-align/4blmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.737858
/projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t2k-w0.5.mod(22):  Reading nostruct-align/1cdy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-2557/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t2k-w0.5.mod (nostruct-align/1cdy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.035873
/projects/compbio/experiments/models.97/pdb/1d/1dkcA/nostruct-align/1dkcA.t2k-w0.5.mod(21):  Reading nostruct-align/1dkcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-16409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkcA/nostruct-align/1dkcA.t2k-w0.5.mod (nostruct-align/1dkcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkcA/nostruct-align/1dkcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.372850
/projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t2k-w0.5.mod(22):  Reading nostruct-align/4mt2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t2k-w0.5.mod (nostruct-align/4mt2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.607872
/projects/compbio/experiments/models.97/pdb/1e/1egiA/nostruct-align/1egiA.t2k-w0.5.mod(21):  Reading nostruct-align/1egiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-547/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egiA/nostruct-align/1egiA.t2k-w0.5.mod (nostruct-align/1egiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egiA/nostruct-align/1egiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.202894
/projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t2k-w0.5.mod(21):  Reading nostruct-align/1thjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-2358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t2k-w0.5.mod (nostruct-align/1thjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.037901
/projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-w0.5.mod(22):  Reading nostruct-align/1guqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-w0.5.mod (nostruct-align/1guqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.165855
/projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t2k-w0.5.mod(21):  Reading nostruct-align/1b1cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t2k-w0.5.mod (nostruct-align/1b1cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.795851
/projects/compbio/experiments/models.97/pdb/1f/1f0mA/nostruct-align/1f0mA.t2k-w0.5.mod(22):  Reading nostruct-align/1f0mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0mA/nostruct-align/1f0mA.t2k-w0.5.mod (nostruct-align/1f0mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0mA/nostruct-align/1f0mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.092871
/projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t2k-w0.5.mod(21):  Reading nostruct-align/1drmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t2k-w0.5.mod (nostruct-align/1drmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.267851
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Reading nostruct-align/1cec.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod (nostruct-align/1cec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.766859
/projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t2k-w0.5.mod(21):  Reading nostruct-align/1aoiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22951/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t2k-w0.5.mod (nostruct-align/1aoiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.484896
/projects/compbio/experiments/models.97/pdb/1g/1ga3A/nostruct-align/1ga3A.t2k-w0.5.mod(21):  Reading nostruct-align/1ga3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-26690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga3A/nostruct-align/1ga3A.t2k-w0.5.mod (nostruct-align/1ga3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ga3A/nostruct-align/1ga3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.593866
/projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t2k-w0.5.mod(21):  Reading nostruct-align/1aoiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-26641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t2k-w0.5.mod (nostruct-align/1aoiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.827883
/projects/compbio/experiments/models.97/pdb/1y/1yal/nostruct-align/1yal.t2k-w0.5.mod(22):  Reading nostruct-align/1yal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-29004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yal/nostruct-align/1yal.t2k-w0.5.mod (nostruct-align/1yal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yal/nostruct-align/1yal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.628857
/projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t2k-w0.5.mod(21):  Reading nostruct-align/1aoiC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-18175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t2k-w0.5.mod (nostruct-align/1aoiC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.133909
/projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t2k-w0.5.mod(21):  Reading nostruct-align/1aoiD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-16441/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t2k-w0.5.mod (nostruct-align/1aoiD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.242857
/projects/compbio/experiments/models.97/pdb/1q/1qlpA/nostruct-align/1qlpA.t2k-w0.5.mod(21):  Reading nostruct-align/1qlpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-22888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlpA/nostruct-align/1qlpA.t2k-w0.5.mod (nostruct-align/1qlpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlpA/nostruct-align/1qlpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.422899
/projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t2k-w0.5.mod(21):  Reading nostruct-align/1aoiF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-16346/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t2k-w0.5.mod (nostruct-align/1aoiF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.731867
/projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t2k-w0.5.mod(21):  Reading nostruct-align/1cei.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t2k-w0.5.mod (nostruct-align/1cei.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.062857
/projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t2k-w0.5.mod(21):  Reading nostruct-align/1aoiG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-21159/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t2k-w0.5.mod (nostruct-align/1aoiG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.866907
/projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t2k-w0.5.mod(22):  Reading nostruct-align/1joa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-4072/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t2k-w0.5.mod (nostruct-align/1joa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.301886
/projects/compbio/experiments/models.97/pdb/1d/1dywA/nostruct-align/1dywA.t2k-w0.5.mod(22):  Reading nostruct-align/1dywA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-9958/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dywA/nostruct-align/1dywA.t2k-w0.5.mod (nostruct-align/1dywA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dywA/nostruct-align/1dywA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.428902
/projects/compbio/experiments/models.97/pdb/1a/1avsA/nostruct-align/1avsA.t2k-w0.5.mod(22):  Reading nostruct-align/1avsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-22915/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avsA/nostruct-align/1avsA.t2k-w0.5.mod (nostruct-align/1avsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avsA/nostruct-align/1avsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.115891
/projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t2k-w0.5.mod(22):  Reading nostruct-align/1cem.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t2k-w0.5.mod (nostruct-align/1cem.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.243864
/projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t2k-w0.5.mod(21):  Reading nostruct-align/2fua.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-13406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t2k-w0.5.mod (nostruct-align/2fua.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.312878
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Reading nostruct-align/1ceo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.032852
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Reading nostruct-align/1k3fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod (nostruct-align/1k3fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.569902
/projects/compbio/experiments/models.97/pdb/1d/1d0yA/nostruct-align/1d0yA.t2k-w0.5.mod(22):  Reading nostruct-align/1d0yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-4840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d0yA/nostruct-align/1d0yA.t2k-w0.5.mod (nostruct-align/1d0yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d0yA/nostruct-align/1d0yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.297890
/projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-w0.5.mod(21):  Reading nostruct-align/4fiv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-21386/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-w0.5.mod (nostruct-align/4fiv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.984863
/projects/compbio/experiments/models.97/pdb/1j/1jqlB/nostruct-align/1jqlB.t2k-w0.5.mod(22):  Reading nostruct-align/1jqlB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqlB/nostruct-align/1jqlB.t2k-w0.5.mod (nostruct-align/1jqlB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jqlB/nostruct-align/1jqlB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.958879
/projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t2k-w0.5.mod(21):  Reading nostruct-align/1p04A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t2k-w0.5.mod (nostruct-align/1p04A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.654890
/projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t2k-w0.5.mod(21):  Reading nostruct-align/1gnhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-27378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t2k-w0.5.mod (nostruct-align/1gnhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.684856
/projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-w0.5.mod(22):  Reading nostruct-align/1cex.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-19783/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-w0.5.mod (nostruct-align/1cex.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.549877
/projects/compbio/experiments/models.97/pdb/1c/1ci3M/nostruct-align/1ci3M.t2k-w0.5.mod(22):  Reading nostruct-align/1ci3M.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5124/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci3M/nostruct-align/1ci3M.t2k-w0.5.mod (nostruct-align/1ci3M.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ci3M/nostruct-align/1ci3M.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.372902
/projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t2k-w0.5.mod(21):  Reading nostruct-align/1bzbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-4329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t2k-w0.5.mod (nostruct-align/1bzbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.657888
/projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t2k-w0.5.mod(21):  Reading nostruct-align/1d8bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-26342/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t2k-w0.5.mod (nostruct-align/1d8bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.167906
/projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t2k-w0.5.mod(22):  Reading nostruct-align/1bdfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11801/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t2k-w0.5.mod (nostruct-align/1bdfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.361874
/projects/compbio/experiments/models.97/pdb/1i/1i50A/nostruct-align/1i50A.t2k-w0.5.mod(22):  Reading nostruct-align/1i50A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-1334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50A/nostruct-align/1i50A.t2k-w0.5.mod (nostruct-align/1i50A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50A/nostruct-align/1i50A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.335894
/projects/compbio/experiments/models.97/pdb/1i/1i50B/nostruct-align/1i50B.t2k-w0.5.mod(22):  Reading nostruct-align/1i50B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-17897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50B/nostruct-align/1i50B.t2k-w0.5.mod (nostruct-align/1i50B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50B/nostruct-align/1i50B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.161858
/projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t2k-w0.5.mod(21):  Reading nostruct-align/1qyp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-8050/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t2k-w0.5.mod (nostruct-align/1qyp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.811907
/projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t2k-w0.5.mod(22):  Reading nostruct-align/1cfb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6079/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t2k-w0.5.mod (nostruct-align/1cfb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.393892
/projects/compbio/experiments/models.97/pdb/1f/1f0nA/nostruct-align/1f0nA.t2k-w0.5.mod(21):  Reading nostruct-align/1f0nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-28370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0nA/nostruct-align/1f0nA.t2k-w0.5.mod (nostruct-align/1f0nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0nA/nostruct-align/1f0nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.311874
/projects/compbio/experiments/models.97/pdb/1i/1i50C/nostruct-align/1i50C.t2k-w0.5.mod(22):  Reading nostruct-align/1i50C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-1425/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50C/nostruct-align/1i50C.t2k-w0.5.mod (nostruct-align/1i50C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50C/nostruct-align/1i50C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.511881
/projects/compbio/experiments/models.97/pdb/1h/1hs6A/nostruct-align/1hs6A.t2k-w0.5.mod(22):  Reading nostruct-align/1hs6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9146/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hs6A/nostruct-align/1hs6A.t2k-w0.5.mod (nostruct-align/1hs6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hs6A/nostruct-align/1hs6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.423870
/projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-w0.5.mod(22):  Reading nostruct-align/1nbcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12338/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-w0.5.mod (nostruct-align/1nbcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.097885
/projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t2k-w0.5.mod(21):  Reading nostruct-align/1aojA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t2k-w0.5.mod (nostruct-align/1aojA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.462868
/projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t2k-w0.5.mod(21):  Reading nostruct-align/1cfe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21204/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t2k-w0.5.mod (nostruct-align/1cfe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.120911
/projects/compbio/experiments/models.97/pdb/1i/1i50F/nostruct-align/1i50F.t2k-w0.5.mod(22):  Reading nostruct-align/1i50F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50F/nostruct-align/1i50F.t2k-w0.5.mod (nostruct-align/1i50F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50F/nostruct-align/1i50F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.195860
/projects/compbio/experiments/models.97/pdb/1e/1ep2B/nostruct-align/1ep2B.t2k-w0.5.mod(21):  Reading nostruct-align/1ep2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-15543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep2B/nostruct-align/1ep2B.t2k-w0.5.mod (nostruct-align/1ep2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ep2B/nostruct-align/1ep2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.328901
/projects/compbio/experiments/models.97/pdb/1i/1i50H/nostruct-align/1i50H.t2k-w0.5.mod(22):  Reading nostruct-align/1i50H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50H/nostruct-align/1i50H.t2k-w0.5.mod (nostruct-align/1i50H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50H/nostruct-align/1i50H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.416872
/projects/compbio/experiments/models.97/pdb/1c/1cfg/nostruct-align/1cfg.t2k-w0.5.mod(21):  Reading nostruct-align/1cfg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-26115/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfg/nostruct-align/1cfg.t2k-w0.5.mod (nostruct-align/1cfg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfg/nostruct-align/1cfg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.916855
/projects/compbio/experiments/models.97/pdb/1i/1i50I/nostruct-align/1i50I.t2k-w0.5.mod(22):  Reading nostruct-align/1i50I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50I/nostruct-align/1i50I.t2k-w0.5.mod (nostruct-align/1i50I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50I/nostruct-align/1i50I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.383902
/projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k-w0.5.mod(21):  Reading nostruct-align/1bkpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-24779/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k-w0.5.mod (nostruct-align/1bkpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.692902
/projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t2k-w0.5.mod(21):  Reading nostruct-align/1cfh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t2k-w0.5.mod (nostruct-align/1cfh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.967911
/projects/compbio/experiments/models.97/pdb/1i/1i50J/nostruct-align/1i50J.t2k-w0.5.mod(22):  Reading nostruct-align/1i50J.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-26882/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50J/nostruct-align/1i50J.t2k-w0.5.mod (nostruct-align/1i50J.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50J/nostruct-align/1i50J.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.888910
/projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t2k-w0.5.mod(22):  Reading nostruct-align/1cfi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-21782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t2k-w0.5.mod (nostruct-align/1cfi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.962873
/projects/compbio/experiments/models.97/pdb/1i/1i50K/nostruct-align/1i50K.t2k-w0.5.mod(22):  Reading nostruct-align/1i50K.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14559/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50K/nostruct-align/1i50K.t2k-w0.5.mod (nostruct-align/1i50K.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50K/nostruct-align/1i50K.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.819878
/projects/compbio/experiments/models.97/pdb/1i/1i50L/nostruct-align/1i50L.t2k-w0.5.mod(22):  Reading nostruct-align/1i50L.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i50L/nostruct-align/1i50L.t2k-w0.5.mod (nostruct-align/1i50L.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i50L/nostruct-align/1i50L.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.683887
/projects/compbio/experiments/models.97/pdb/1c/1ci4A/nostruct-align/1ci4A.t2k-w0.5.mod(22):  Reading nostruct-align/1ci4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-7067/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci4A/nostruct-align/1ci4A.t2k-w0.5.mod (nostruct-align/1ci4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ci4A/nostruct-align/1ci4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.036863
/projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t2k-w0.5.mod(22):  Reading nostruct-align/1jpc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t2k-w0.5.mod (nostruct-align/1jpc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.928869
/projects/compbio/experiments/models.97/pdb/1k/1kfiA/nostruct-align/1kfiA.t2k-w0.5.mod(22):  Reading nostruct-align/1kfiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-7695/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kfiA/nostruct-align/1kfiA.t2k-w0.5.mod (nostruct-align/1kfiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kfiA/nostruct-align/1kfiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.890881
/projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t2k-w0.5.mod(22):  Reading nostruct-align/1cfr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t2k-w0.5.mod (nostruct-align/1cfr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.179873
/projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-w0.5.mod(22):  Reading nostruct-align/1qu9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1267/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-w0.5.mod (nostruct-align/1qu9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.837885
/projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k-w0.5.mod(22):  Reading nostruct-align/6rlxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23138/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k-w0.5.mod (nostruct-align/6rlxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.741859
/projects/compbio/experiments/models.97/pdb/1q/1qu9C/nostruct-align/1qu9C.t2k-w0.5.mod(22):  Reading nostruct-align/1qu9C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-13286/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qu9C/nostruct-align/1qu9C.t2k-w0.5.mod (nostruct-align/1qu9C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qu9C/nostruct-align/1qu9C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.888866
/projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k-w0.5.mod(22):  Reading nostruct-align/6rlxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k-w0.5.mod (nostruct-align/6rlxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.303898
/projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t2k-w0.5.mod(21):  Reading nostruct-align/1yrnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-4106/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t2k-w0.5.mod (nostruct-align/1yrnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.263903
/projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t2k-w0.5.mod(21):  Reading nostruct-align/1yrnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-31657/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t2k-w0.5.mod (nostruct-align/1yrnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.693871
/projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t2k-w0.5.mod(22):  Reading nostruct-align/1d8cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12196/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t2k-w0.5.mod (nostruct-align/1d8cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.820860
/projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t2k-w0.5.mod(21):  Reading nostruct-align/1tabI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29948/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t2k-w0.5.mod (nostruct-align/1tabI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.918880
/projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k-w0.5.mod(21):  Reading nostruct-align/1ycc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-764/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k-w0.5.mod (nostruct-align/1ycc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.678885
/projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t2k-w0.5.mod(21):  Reading nostruct-align/1cviA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6989/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t2k-w0.5.mod (nostruct-align/1cviA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.400858
/projects/compbio/experiments/models.97/pdb/1e/1e4iA/nostruct-align/1e4iA.t2k-w0.5.mod(21):  Reading nostruct-align/1e4iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25624/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4iA/nostruct-align/1e4iA.t2k-w0.5.mod (nostruct-align/1e4iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4iA/nostruct-align/1e4iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.754868
/projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t2k-w0.5.mod(21):  Reading nostruct-align/2fx2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-3022/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t2k-w0.5.mod (nostruct-align/2fx2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.790899
/projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-w0.5.mod(22):  Reading nostruct-align/1fcqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8598/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-w0.5.mod (nostruct-align/1fcqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fcqA/nostruct-align/1fcqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.152882
/projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t2k-w0.5.mod(22):  Reading nostruct-align/1otfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t2k-w0.5.mod (nostruct-align/1otfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.608881
/projects/compbio/experiments/models.97/pdb/1h/1hs7A/nostruct-align/1hs7A.t2k-w0.5.mod(21):  Reading nostruct-align/1hs7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14758/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hs7A/nostruct-align/1hs7A.t2k-w0.5.mod (nostruct-align/1hs7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hs7A/nostruct-align/1hs7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.148872
/projects/compbio/experiments/models.97/pdb/2f/2fvx/nostruct-align/2fvx.t2k-w0.5.mod(21):  Reading nostruct-align/2fvx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fvx/nostruct-align/2fvx.t2k-w0.5.mod (nostruct-align/2fvx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fvx/nostruct-align/2fvx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.525909
/projects/compbio/experiments/models.97/pdb/1a/1aokB/nostruct-align/1aokB.t2k-w0.5.mod(21):  Reading nostruct-align/1aokB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-12354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aokB/nostruct-align/1aokB.t2k-w0.5.mod (nostruct-align/1aokB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aokB/nostruct-align/1aokB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.992910
/projects/compbio/experiments/models.97/pdb/1e/1ep3A/nostruct-align/1ep3A.t2k-w0.5.mod(21):  Reading nostruct-align/1ep3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4885/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep3A/nostruct-align/1ep3A.t2k-w0.5.mod (nostruct-align/1ep3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ep3A/nostruct-align/1ep3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.970875
/projects/compbio/experiments/models.97/pdb/1e/1ep3B/nostruct-align/1ep3B.t2k-w0.5.mod(22):  Reading nostruct-align/1ep3B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25070/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ep3B/nostruct-align/1ep3B.t2k-w0.5.mod (nostruct-align/1ep3B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ep3B/nostruct-align/1ep3B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.289875
/projects/compbio/experiments/models.97/pdb/1s/1sspE/nostruct-align/1sspE.t2k-w0.5.mod(21):  Reading nostruct-align/1sspE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sspE/nostruct-align/1sspE.t2k-w0.5.mod (nostruct-align/1sspE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sspE/nostruct-align/1sspE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.350866
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod (nostruct-align/1b8oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.618910
/projects/compbio/experiments/models.97/pdb/1f/1f97A/nostruct-align/1f97A.t2k-w0.5.mod(21):  Reading nostruct-align/1f97A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-24629/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f97A/nostruct-align/1f97A.t2k-w0.5.mod (nostruct-align/1f97A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f97A/nostruct-align/1f97A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.103912
/projects/compbio/experiments/models.97/pdb/1j/1jjdA/nostruct-align/1jjdA.t2k-w0.5.mod(21):  Reading nostruct-align/1jjdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-31944/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjdA/nostruct-align/1jjdA.t2k-w0.5.mod (nostruct-align/1jjdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjdA/nostruct-align/1jjdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.182878
/projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t2k-w0.5.mod(21):  Reading nostruct-align/1cgo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-20355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t2k-w0.5.mod (nostruct-align/1cgo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.100864
/projects/compbio/experiments/models.97/pdb/1h/1hqz1/nostruct-align/1hqz1.t2k-w0.5.mod(22):  Reading nostruct-align/1hqz1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6966/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hqz1/nostruct-align/1hqz1.t2k-w0.5.mod (nostruct-align/1hqz1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hqz1/nostruct-align/1hqz1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.828871
/projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t2k-w0.5.mod(21):  Reading nostruct-align/1cgt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-31281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t2k-w0.5.mod (nostruct-align/1cgt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.963886
/projects/compbio/experiments/models.97/pdb/1v/1vokA/nostruct-align/1vokA.t2k-w0.5.mod(21):  Reading nostruct-align/1vokA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-7848/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vokA/nostruct-align/1vokA.t2k-w0.5.mod (nostruct-align/1vokA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vokA/nostruct-align/1vokA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.911896
/projects/compbio/experiments/models.97/pdb/1d/1d8dA/nostruct-align/1d8dA.t2k-w0.5.mod(22):  Reading nostruct-align/1d8dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8dA/nostruct-align/1d8dA.t2k-w0.5.mod (nostruct-align/1d8dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8dA/nostruct-align/1d8dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.797867
/projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t2k-w0.5.mod(21):  Reading nostruct-align/1d8dB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-7850/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t2k-w0.5.mod (nostruct-align/1d8dB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.776909
/projects/compbio/experiments/models.97/pdb/1h/1h7nA/nostruct-align/1h7nA.t2k-w0.5.mod(22):  Reading nostruct-align/1h7nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7nA/nostruct-align/1h7nA.t2k-w0.5.mod (nostruct-align/1h7nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7nA/nostruct-align/1h7nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.861900
/projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-w0.5.mod(22):  Reading nostruct-align/1l6xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-w0.5.mod (nostruct-align/1l6xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l6xA/nostruct-align/1l6xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.602880
/projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k-w0.5.mod(22):  Reading nostruct-align/1l6xB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15507/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k-w0.5.mod (nostruct-align/1l6xB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l6xB/nostruct-align/1l6xB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.496859
/projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t2k-w0.5.mod(21):  Reading nostruct-align/1cvjB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-12627/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t2k-w0.5.mod (nostruct-align/1cvjB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.735878
/projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-w0.5.mod(22):  Reading nostruct-align/1gutA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-2203/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-w0.5.mod (nostruct-align/1gutA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gutA/nostruct-align/1gutA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.511908
/projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-w0.5.mod(22):  Reading nostruct-align/1i52A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9914/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-w0.5.mod (nostruct-align/1i52A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i52A/nostruct-align/1i52A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.153872
/projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k-w0.5.mod(21):  Reading nostruct-align/1fe0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-23775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k-w0.5.mod (nostruct-align/1fe0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fe0A/nostruct-align/1fe0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.207901
/projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t2k-w0.5.mod(22):  Reading nostruct-align/1otgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8765/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t2k-w0.5.mod (nostruct-align/1otgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.557869
/projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t2k-w0.5.mod(21):  Reading nostruct-align/1chc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-9298/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t2k-w0.5.mod (nostruct-align/1chc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.928883
/projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-w0.5.mod(22):  Reading nostruct-align/1chd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-9626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-w0.5.mod (nostruct-align/1chd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.856888
/projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-w0.5.mod(22):  Reading nostruct-align/1ga6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29438/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-w0.5.mod (nostruct-align/1ga6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ga6A/nostruct-align/1ga6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.685900
/projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t2k-w0.5.mod(21):  Reading nostruct-align/1envA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-13528/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t2k-w0.5.mod (nostruct-align/1envA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.310890
/projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-w0.5.mod(22):  Reading nostruct-align/1bkrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-11777/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-w0.5.mod (nostruct-align/1bkrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.800877
/projects/compbio/experiments/models.97/pdb/1b/1b8pA/nostruct-align/1b8pA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-18841/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8pA/nostruct-align/1b8pA.t2k-w0.5.mod (nostruct-align/1b8pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8pA/nostruct-align/1b8pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.030878
/projects/compbio/experiments/models.97/pdb/1d/1dyzA/nostruct-align/1dyzA.t2k-w0.5.mod(21):  Reading nostruct-align/1dyzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-5742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyzA/nostruct-align/1dyzA.t2k-w0.5.mod (nostruct-align/1dyzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dyzA/nostruct-align/1dyzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.043854
/projects/compbio/experiments/models.97/pdb/1f/1f7zA/nostruct-align/1f7zA.t2k-w0.5.mod(21):  Reading nostruct-align/1f7zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24615/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f7zA/nostruct-align/1f7zA.t2k-w0.5.mod (nostruct-align/1f7zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f7zA/nostruct-align/1f7zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.590893
/projects/compbio/experiments/models.97/pdb/1y/1ykfA/nostruct-align/1ykfA.t2k-w0.5.mod(21):  Reading nostruct-align/1ykfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-25450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ykfA/nostruct-align/1ykfA.t2k-w0.5.mod (nostruct-align/1ykfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ykfA/nostruct-align/1ykfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.577858
/projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t2k-w0.5.mod(21):  Reading nostruct-align/1chl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22402/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t2k-w0.5.mod (nostruct-align/1chl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.010910
/projects/compbio/experiments/models.97/pdb/1c/1ci6A/nostruct-align/1ci6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ci6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci6A/nostruct-align/1ci6A.t2k-w0.5.mod (nostruct-align/1ci6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ci6A/nostruct-align/1ci6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.056875
/projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t2k-w0.5.mod(22):  Reading nostruct-align/1ax4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28569/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t2k-w0.5.mod (nostruct-align/1ax4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.808884
/projects/compbio/experiments/models.97/pdb/1c/1ci6B/nostruct-align/1ci6B.t2k-w0.5.mod(21):  Reading nostruct-align/1ci6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29802/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci6B/nostruct-align/1ci6B.t2k-w0.5.mod (nostruct-align/1ci6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ci6B/nostruct-align/1ci6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.185898
/projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-w0.5.mod(22):  Reading nostruct-align/1k3iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-w0.5.mod (nostruct-align/1k3iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k3iA/nostruct-align/1k3iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.904854
/projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t2k-w0.5.mod(21):  Reading nostruct-align/2hhmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t2k-w0.5.mod (nostruct-align/2hhmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.220884
/projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t2k-w0.5.mod(21):  Reading nostruct-align/1ab8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-2680/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t2k-w0.5.mod (nostruct-align/1ab8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.736881
/projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t2k-w0.5.mod(21):  Reading nostruct-align/1hcgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-10886/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t2k-w0.5.mod (nostruct-align/1hcgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.445856
/projects/compbio/experiments/models.97/pdb/1t/1tadA/nostruct-align/1tadA.t2k-w0.5.mod(22):  Reading nostruct-align/1tadA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-14692/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tadA/nostruct-align/1tadA.t2k-w0.5.mod (nostruct-align/1tadA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tadA/nostruct-align/1tadA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.372854
/projects/compbio/experiments/models.97/pdb/1v/1volA/nostruct-align/1volA.t2k-w0.5.mod(21):  Reading nostruct-align/1volA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-22154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1volA/nostruct-align/1volA.t2k-w0.5.mod (nostruct-align/1volA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1volA/nostruct-align/1volA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.709902
/projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-w0.5.mod(22):  Reading nostruct-align/2dpmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-w0.5.mod (nostruct-align/2dpmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.414871
/projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t2k-w0.5.mod(22):  Reading nostruct-align/1dkgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t2k-w0.5.mod (nostruct-align/1dkgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.141859
/projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t2k-w0.5.mod(21):  Reading nostruct-align/1dkgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9954/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t2k-w0.5.mod (nostruct-align/1dkgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.259863
/projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t2k-w0.5.mod(21):  Reading nostruct-align/1dkgD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-483/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t2k-w0.5.mod (nostruct-align/1dkgD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.816853
/projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t2k-w0.5.mod(21):  Reading nostruct-align/1coaI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-4088/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t2k-w0.5.mod (nostruct-align/1coaI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.908859
/projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k-w0.5.mod(21):  Reading nostruct-align/1pidA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k-w0.5.mod (nostruct-align/1pidA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.474878
/projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t2k-w0.5.mod(21):  Reading nostruct-align/1pidB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-29292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t2k-w0.5.mod (nostruct-align/1pidB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.351898
/projects/compbio/experiments/models.97/pdb/1i/1i3uA/nostruct-align/1i3uA.t2k-w0.5.mod(22):  Reading nostruct-align/1i3uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-22975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i3uA/nostruct-align/1i3uA.t2k-w0.5.mod (nostruct-align/1i3uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i3uA/nostruct-align/1i3uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.590862
/projects/compbio/experiments/models.97/pdb/1d/1drqA/nostruct-align/1drqA.t2k-w0.5.mod(21):  Reading nostruct-align/1drqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10305/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drqA/nostruct-align/1drqA.t2k-w0.5.mod (nostruct-align/1drqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1drqA/nostruct-align/1drqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.508900
/projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t2k-w0.5.mod(21):  Reading nostruct-align/1othA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-17861/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t2k-w0.5.mod (nostruct-align/1othA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.245880
/projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t2k-w0.5.mod(21):  Reading nostruct-align/2jhbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-21561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t2k-w0.5.mod (nostruct-align/2jhbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.208855
/projects/compbio/experiments/models.97/pdb/1a/1aomA/nostruct-align/1aomA.t2k-w0.5.mod(21):  Reading nostruct-align/1aomA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-4415/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aomA/nostruct-align/1aomA.t2k-w0.5.mod (nostruct-align/1aomA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aomA/nostruct-align/1aomA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.615858
/projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t2k-w0.5.mod(22):  Reading nostruct-align/1cid.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6502/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t2k-w0.5.mod (nostruct-align/1cid.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.668850
/projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t2k-w0.5.mod(21):  Reading nostruct-align/1enwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-32334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t2k-w0.5.mod (nostruct-align/1enwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.890902
/projects/compbio/experiments/models.97/pdb/3k/3kinB/nostruct-align/3kinB.t2k-w0.5.mod(21):  Reading nostruct-align/3kinB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-21523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3k/3kinB/nostruct-align/3kinB.t2k-w0.5.mod (nostruct-align/3kinB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3k/3kinB/nostruct-align/3kinB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.594868
/projects/compbio/experiments/models.97/pdb/1b/1bksA/nostruct-align/1bksA.t2k-w0.5.mod(21):  Reading nostruct-align/1bksA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-8470/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bksA/nostruct-align/1bksA.t2k-w0.5.mod (nostruct-align/1bksA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bksA/nostruct-align/1bksA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.706860
/projects/compbio/experiments/models.97/pdb/1b/1bksB/nostruct-align/1bksB.t2k-w0.5.mod(21):  Reading nostruct-align/1bksB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6022/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bksB/nostruct-align/1bksB.t2k-w0.5.mod (nostruct-align/1bksB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bksB/nostruct-align/1bksB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.158880
/projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t2k-w0.5.mod(21):  Reading nostruct-align/1b8qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-15358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t2k-w0.5.mod (nostruct-align/1b8qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.783859
/projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t2k-w0.5.mod(21):  Reading nostruct-align/1cii.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-13829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t2k-w0.5.mod (nostruct-align/1cii.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.503859
/projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t2k-w0.5.mod(21):  Reading nostruct-align/1qltA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-26835/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t2k-w0.5.mod (nostruct-align/1qltA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.201857
/projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k-w0.5.mod(22):  Reading nostruct-align/1jjfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-3235/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k-w0.5.mod (nostruct-align/1jjfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjfA/nostruct-align/1jjfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.203888
/projects/compbio/experiments/models.97/pdb/1j/1j7dA/nostruct-align/1j7dA.t2k-w0.5.mod(22):  Reading nostruct-align/1j7dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22110/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7dA/nostruct-align/1j7dA.t2k-w0.5.mod (nostruct-align/1j7dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j7dA/nostruct-align/1j7dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.241901
/projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t2k-w0.5.mod(21):  Reading nostruct-align/1nipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27302/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t2k-w0.5.mod (nostruct-align/1nipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.174871
/projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t2k-w0.5.mod(21):  Reading nostruct-align/1yer.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-31573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t2k-w0.5.mod (nostruct-align/1yer.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.468882
/projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-w0.5.mod(22):  Reading nostruct-align/1avwB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5011/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-w0.5.mod (nostruct-align/1avwB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.283907
/projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t2k-w0.5.mod(21):  Reading nostruct-align/1jsf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-2289/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t2k-w0.5.mod (nostruct-align/1jsf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.011896
/projects/compbio/experiments/models.97/pdb/1a/1ab9C/nostruct-align/1ab9C.t2k-w0.5.mod(21):  Reading nostruct-align/1ab9C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ab9C/nostruct-align/1ab9C.t2k-w0.5.mod (nostruct-align/1ab9C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ab9C/nostruct-align/1ab9C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.336878
/projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t2k-w0.5.mod(21):  Reading nostruct-align/2cthA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-8405/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t2k-w0.5.mod (nostruct-align/2cthA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.036875
/projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-w0.5.mod(22):  Reading nostruct-align/1gnlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12056/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-w0.5.mod (nostruct-align/1gnlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gnlA/nostruct-align/1gnlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.787895
/projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t2k-w0.5.mod(21):  Reading nostruct-align/1ciy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t2k-w0.5.mod (nostruct-align/1ciy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.263851
/projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t2k-w0.5.mod(22):  Reading nostruct-align/1hjrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t2k-w0.5.mod (nostruct-align/1hjrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.249865
/projects/compbio/experiments/models.97/pdb/1e/1egnA/nostruct-align/1egnA.t2k-w0.5.mod(22):  Reading nostruct-align/1egnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-31040/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egnA/nostruct-align/1egnA.t2k-w0.5.mod (nostruct-align/1egnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egnA/nostruct-align/1egnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.006893
/projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-w0.5.mod(22):  Reading nostruct-align/1jz8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16349/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-w0.5.mod (nostruct-align/1jz8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jz8A/nostruct-align/1jz8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.944904
/projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t2k-w0.5.mod(22):  Reading nostruct-align/1914.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-16217/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t2k-w0.5.mod (nostruct-align/1914.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.276892
/projects/compbio/experiments/models.97/pdb/1f/1f20A/nostruct-align/1f20A.t2k-w0.5.mod(22):  Reading nostruct-align/1f20A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-20059/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f20A/nostruct-align/1f20A.t2k-w0.5.mod (nostruct-align/1f20A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f20A/nostruct-align/1f20A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.554892
/projects/compbio/experiments/models.97/pdb/2c/2cevA/nostruct-align/2cevA.t2k-w0.5.mod(22):  Reading nostruct-align/2cevA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-3402/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cevA/nostruct-align/2cevA.t2k-w0.5.mod (nostruct-align/2cevA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cevA/nostruct-align/2cevA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.037861
/projects/compbio/experiments/models.97/pdb/1g/1ga8A/nostruct-align/1ga8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ga8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27904/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ga8A/nostruct-align/1ga8A.t2k-w0.5.mod (nostruct-align/1ga8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ga8A/nostruct-align/1ga8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.513874
/projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t2k-w0.5.mod(22):  Reading nostruct-align/4cpaI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29466/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t2k-w0.5.mod (nostruct-align/4cpaI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.479904
/projects/compbio/experiments/models.97/pdb/1h/1hyeA/nostruct-align/1hyeA.t2k-w0.5.mod(21):  Reading nostruct-align/1hyeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11812/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyeA/nostruct-align/1hyeA.t2k-w0.5.mod (nostruct-align/1hyeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyeA/nostruct-align/1hyeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.535906
/projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t2k-w0.5.mod(21):  Reading nostruct-align/2gliA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22852/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t2k-w0.5.mod (nostruct-align/2gliA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -49.731899
/projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t2k-w0.5.mod(21):  Reading nostruct-align/1c4xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-27925/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t2k-w0.5.mod (nostruct-align/1c4xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.846870
/projects/compbio/experiments/models.97/pdb/1a/1aonO/nostruct-align/1aonO.t2k-w0.5.mod(21):  Reading nostruct-align/1aonO.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-21058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aonO/nostruct-align/1aonO.t2k-w0.5.mod (nostruct-align/1aonO.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aonO/nostruct-align/1aonO.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.905891
/projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t2k-w0.5.mod(22):  Reading nostruct-align/1tafA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t2k-w0.5.mod (nostruct-align/1tafA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.469870
/projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t2k-w0.5.mod(22):  Reading nostruct-align/1tafB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-14513/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t2k-w0.5.mod (nostruct-align/1tafB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.520899
/projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-w0.5.mod(22):  Reading nostruct-align/1dkiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27739/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-w0.5.mod (nostruct-align/1dkiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.360874
/projects/compbio/experiments/models.97/pdb/1c/1cvmA/nostruct-align/1cvmA.t2k-w0.5.mod(21):  Reading nostruct-align/1cvmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-25211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvmA/nostruct-align/1cvmA.t2k-w0.5.mod (nostruct-align/1cvmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cvmA/nostruct-align/1cvmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.385855
/projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-w0.5.mod(22):  Reading nostruct-align/1yge.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-1723/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-w0.5.mod (nostruct-align/1yge.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.715887
/projects/compbio/experiments/models.97/pdb/1f/1f21A/nostruct-align/1f21A.t2k-w0.5.mod(22):  Reading nostruct-align/1f21A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28003/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f21A/nostruct-align/1f21A.t2k-w0.5.mod (nostruct-align/1f21A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f21A/nostruct-align/1f21A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.836899
/projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t2k-w0.5.mod(21):  Reading nostruct-align/2ncm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t2k-w0.5.mod (nostruct-align/2ncm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.155893
/projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t2k-w0.5.mod(21):  Reading nostruct-align/5fbpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-7693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t2k-w0.5.mod (nostruct-align/5fbpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.677870
/projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2793/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t2k-w0.5.mod (nostruct-align/1b8sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.640877
/projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k-w0.5.mod(22):  Reading nostruct-align/1e4mM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18247/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k-w0.5.mod (nostruct-align/1e4mM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4mM/nostruct-align/1e4mM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.667862
/projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ci9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-13871/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k-w0.5.mod (nostruct-align/1ci9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ci9A/nostruct-align/1ci9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.796894
/projects/compbio/experiments/models.97/pdb/2t/2tmvP/nostruct-align/2tmvP.t2k-w0.5.mod(21):  Reading nostruct-align/2tmvP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tmvP/nostruct-align/2tmvP.t2k-w0.5.mod (nostruct-align/2tmvP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tmvP/nostruct-align/2tmvP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.926874
/projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t2k-w0.5.mod(22):  Reading nostruct-align/1ygs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t2k-w0.5.mod (nostruct-align/1ygs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.329866
/projects/compbio/experiments/models.97/pdb/1a/1avyA/nostruct-align/1avyA.t2k-w0.5.mod(22):  Reading nostruct-align/1avyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avyA/nostruct-align/1avyA.t2k-w0.5.mod (nostruct-align/1avyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avyA/nostruct-align/1avyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.377865
/projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t2k-w0.5.mod(21):  Reading nostruct-align/1avyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-11015/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t2k-w0.5.mod (nostruct-align/1avyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.038872
/projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t2k-w0.5.mod(21):  Reading nostruct-align/1avyC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-11809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t2k-w0.5.mod (nostruct-align/1avyC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.400904
/projects/compbio/experiments/models.97/pdb/1j/1jug/nostruct-align/1jug.t2k-w0.5.mod(21):  Reading nostruct-align/1jug.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-11642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jug/nostruct-align/1jug.t2k-w0.5.mod (nostruct-align/1jug.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jug/nostruct-align/1jug.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.977854
/projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t2k-w0.5.mod(21):  Reading nostruct-align/1juk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24106/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t2k-w0.5.mod (nostruct-align/1juk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.988884
/projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t2k-w0.5.mod(21):  Reading nostruct-align/1ckv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-5189/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t2k-w0.5.mod (nostruct-align/1ckv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.491901
/projects/compbio/experiments/models.97/pdb/1d/1d8hA/nostruct-align/1d8hA.t2k-w0.5.mod(22):  Reading nostruct-align/1d8hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8hA/nostruct-align/1d8hA.t2k-w0.5.mod (nostruct-align/1d8hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8hA/nostruct-align/1d8hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.095909
/projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t2k-w0.5.mod(21):  Reading nostruct-align/1egpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10077/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t2k-w0.5.mod (nostruct-align/1egpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.386873
/projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t2k-w0.5.mod(21):  Reading nostruct-align/1egpB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t2k-w0.5.mod (nostruct-align/1egpB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.338900
/projects/compbio/experiments/models.97/pdb/1i/1ih8A/nostruct-align/1ih8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ih8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30193/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ih8A/nostruct-align/1ih8A.t2k-w0.5.mod (nostruct-align/1ih8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ih8A/nostruct-align/1ih8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.405891
/projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t2k-w0.5.mod(22):  Reading nostruct-align/1guxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16067/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t2k-w0.5.mod (nostruct-align/1guxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.905910
/projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t2k-w0.5.mod(22):  Reading nostruct-align/1guxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t2k-w0.5.mod (nostruct-align/1guxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.275902
/projects/compbio/experiments/models.97/pdb/1d/1drtA/nostruct-align/1drtA.t2k-w0.5.mod(21):  Reading nostruct-align/1drtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-12797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drtA/nostruct-align/1drtA.t2k-w0.5.mod (nostruct-align/1drtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1drtA/nostruct-align/1drtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.493904
/projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t2k-w0.5.mod(21):  Reading nostruct-align/1l58.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-24336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t2k-w0.5.mod (nostruct-align/1l58.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.358910
/projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-w0.5.mod(21):  Reading nostruct-align/1cb0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-30578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-w0.5.mod (nostruct-align/1cb0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.358879
/projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t2k-w0.5.mod(21):  Reading nostruct-align/1clc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t2k-w0.5.mod (nostruct-align/1clc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.761896
/projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-w0.5.mod(22):  Reading nostruct-align/2a0b.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25016/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-w0.5.mod (nostruct-align/2a0b.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.780865
/projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t2k-w0.5.mod(21):  Reading nostruct-align/1bm4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t2k-w0.5.mod (nostruct-align/1bm4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.863859
/projects/compbio/experiments/models.97/pdb/1b/1bkvA/nostruct-align/1bkvA.t2k-w0.5.mod(22):  Reading nostruct-align/1bkvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11706/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkvA/nostruct-align/1bkvA.t2k-w0.5.mod (nostruct-align/1bkvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkvA/nostruct-align/1bkvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.621899
/projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-w0.5.mod(22):  Reading nostruct-align/1qlwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-18891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-w0.5.mod (nostruct-align/1qlwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.151880
/projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t2k-w0.5.mod(21):  Reading nostruct-align/1b8tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17766/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t2k-w0.5.mod (nostruct-align/1b8tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.557886
/projects/compbio/experiments/models.97/pdb/1j/1jjiA/nostruct-align/1jjiA.t2k-w0.5.mod(22):  Reading nostruct-align/1jjiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-23097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjiA/nostruct-align/1jjiA.t2k-w0.5.mod (nostruct-align/1jjiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjiA/nostruct-align/1jjiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.884890
/projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t2k-w0.5.mod(21):  Reading nostruct-align/1cll.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-24869/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t2k-w0.5.mod (nostruct-align/1cll.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.363905
/projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t2k-w0.5.mod(22):  Reading nostruct-align/1c4zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-27909/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t2k-w0.5.mod (nostruct-align/1c4zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.932878
/projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t2k-w0.5.mod(21):  Reading nostruct-align/1tahA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t2k-w0.5.mod (nostruct-align/1tahA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.795855
/projects/compbio/experiments/models.97/pdb/1j/1jqsB/nostruct-align/1jqsB.t2k-w0.5.mod(21):  Reading nostruct-align/1jqsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14867/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqsB/nostruct-align/1jqsB.t2k-w0.5.mod (nostruct-align/1jqsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jqsB/nostruct-align/1jqsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.309860
/projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t2k-w0.5.mod(21):  Reading nostruct-align/1tahB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-22699/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t2k-w0.5.mod (nostruct-align/1tahB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.681862
/projects/compbio/experiments/models.97/pdb/1j/1jqsC/nostruct-align/1jqsC.t2k-w0.5.mod(21):  Reading nostruct-align/1jqsC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-17915/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jqsC/nostruct-align/1jqsC.t2k-w0.5.mod (nostruct-align/1jqsC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jqsC/nostruct-align/1jqsC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.077900
/projects/compbio/experiments/models.97/pdb/1k/1ko7A/nostruct-align/1ko7A.t2k-w0.5.mod(22):  Reading nostruct-align/1ko7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30537/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ko7A/nostruct-align/1ko7A.t2k-w0.5.mod (nostruct-align/1ko7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ko7A/nostruct-align/1ko7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.328865
/projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t2k-w0.5.mod(21):  Reading nostruct-align/1d8iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t2k-w0.5.mod (nostruct-align/1d8iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.550894
/projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t2k-w0.5.mod(21):  Reading nostruct-align/1jvr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-24851/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t2k-w0.5.mod (nostruct-align/1jvr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.869856
/projects/compbio/experiments/models.97/pdb/1h/1h7sA/nostruct-align/1h7sA.t2k-w0.5.mod(22):  Reading nostruct-align/1h7sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15542/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7sA/nostruct-align/1h7sA.t2k-w0.5.mod (nostruct-align/1h7sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7sA/nostruct-align/1h7sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.328856
/projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t2k-w0.5.mod(21):  Reading nostruct-align/2nef.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t2k-w0.5.mod (nostruct-align/2nef.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.034895
/projects/compbio/experiments/models.97/pdb/1h/1h91A/nostruct-align/1h91A.t2k-w0.5.mod(21):  Reading nostruct-align/1h91A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h91A/nostruct-align/1h91A.t2k-w0.5.mod (nostruct-align/1h91A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h91A/nostruct-align/1h91A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.162889
/projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-w0.5.mod(22):  Reading nostruct-align/1bdmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5298/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-w0.5.mod (nostruct-align/1bdmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.026901
/projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t2k-w0.5.mod(22):  Reading nostruct-align/1bdmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-23608/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t2k-w0.5.mod (nostruct-align/1bdmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.768877
/projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t2k-w0.5.mod(21):  Reading nostruct-align/1aoqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-16103/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t2k-w0.5.mod (nostruct-align/1aoqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.834854
/projects/compbio/experiments/models.97/pdb/2n/2ng1/nostruct-align/2ng1.t2k-w0.5.mod(21):  Reading nostruct-align/2ng1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-13466/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2ng1/nostruct-align/2ng1.t2k-w0.5.mod (nostruct-align/2ng1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2ng1/nostruct-align/2ng1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.318872
/projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t2k-w0.5.mod(21):  Reading nostruct-align/2new.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-8435/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t2k-w0.5.mod (nostruct-align/2new.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.835878
/projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k-w0.5.mod(22):  Reading nostruct-align/1ra9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k-w0.5.mod (nostruct-align/1ra9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.615854
/projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t2k-w0.5.mod(21):  Reading nostruct-align/1hyhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-22145/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t2k-w0.5.mod (nostruct-align/1hyhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.294905
/projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t2k-w0.5.mod(21):  Reading nostruct-align/1ddbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-20532/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t2k-w0.5.mod (nostruct-align/1ddbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.718901
/projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t2k-w0.5.mod(21):  Reading nostruct-align/1cmr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15070/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t2k-w0.5.mod (nostruct-align/1cmr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.118853
/projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t2k-w0.5.mod(22):  Reading nostruct-align/1pprM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4666/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t2k-w0.5.mod (nostruct-align/1pprM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.864851
/projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t2k-w0.5.mod(21):  Reading nostruct-align/193l.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-19310/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t2k-w0.5.mod (nostruct-align/193l.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.015896
/projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t2k-w0.5.mod(21):  Reading nostruct-align/3cbh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1841/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t2k-w0.5.mod (nostruct-align/3cbh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.344881
/projects/compbio/experiments/models.97/pdb/1d/1dklA/nostruct-align/1dklA.t2k-w0.5.mod(21):  Reading nostruct-align/1dklA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-21993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dklA/nostruct-align/1dklA.t2k-w0.5.mod (nostruct-align/1dklA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dklA/nostruct-align/1dklA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.166864
/projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t2k-w0.5.mod(21):  Reading nostruct-align/1d8jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26375/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t2k-w0.5.mod (nostruct-align/1d8jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.197882
/projects/compbio/experiments/models.97/pdb/1g/1guzA/nostruct-align/1guzA.t2k-w0.5.mod(22):  Reading nostruct-align/1guzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4044/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1guzA/nostruct-align/1guzA.t2k-w0.5.mod (nostruct-align/1guzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1guzA/nostruct-align/1guzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.400887
/projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-w0.5.mod(22):  Reading nostruct-align/1i58A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23705/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-w0.5.mod (nostruct-align/1i58A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i58A/nostruct-align/1i58A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.679901
/projects/compbio/experiments/models.97/pdb/1f/1fe6A/nostruct-align/1fe6A.t2k-w0.5.mod(22):  Reading nostruct-align/1fe6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12785/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe6A/nostruct-align/1fe6A.t2k-w0.5.mod (nostruct-align/1fe6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fe6A/nostruct-align/1fe6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.370876
/projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t2k-w0.5.mod(21):  Reading nostruct-align/1dt4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-7615/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t2k-w0.5.mod (nostruct-align/1dt4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.456896
/projects/compbio/experiments/models.97/pdb/1f/1f24A/nostruct-align/1f24A.t2k-w0.5.mod(22):  Reading nostruct-align/1f24A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-31589/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f24A/nostruct-align/1f24A.t2k-w0.5.mod (nostruct-align/1f24A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f24A/nostruct-align/1f24A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.835865
/projects/compbio/experiments/models.97/pdb/1f/1fe6C/nostruct-align/1fe6C.t2k-w0.5.mod(21):  Reading nostruct-align/1fe6C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31407/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe6C/nostruct-align/1fe6C.t2k-w0.5.mod (nostruct-align/1fe6C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fe6C/nostruct-align/1fe6C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.302908
/projects/compbio/experiments/models.97/pdb/1c/1cb2A/nostruct-align/1cb2A.t2k-w0.5.mod(21):  Reading nostruct-align/1cb2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-24517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb2A/nostruct-align/1cb2A.t2k-w0.5.mod (nostruct-align/1cb2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cb2A/nostruct-align/1cb2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.404886
/projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t2k-w0.5.mod(21):  Reading nostruct-align/1aorA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-12735/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t2k-w0.5.mod (nostruct-align/1aorA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.889894
/projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t2k-w0.5.mod(22):  Reading nostruct-align/1aq0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t2k-w0.5.mod (nostruct-align/1aq0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.618874
/projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t2k-w0.5.mod(21):  Reading nostruct-align/1cne.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-30461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t2k-w0.5.mod (nostruct-align/1cne.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.672884
/projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t2k-w0.5.mod(22):  Reading nostruct-align/3cd4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-694/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t2k-w0.5.mod (nostruct-align/3cd4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.391876
/projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t2k-w0.5.mod(21):  Reading nostruct-align/1mmoB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7221/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t2k-w0.5.mod (nostruct-align/1mmoB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.249891
/projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t2k-w0.5.mod(21):  Reading nostruct-align/1qlyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-21742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t2k-w0.5.mod (nostruct-align/1qlyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.767881
/projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t2k-w0.5.mod(21):  Reading nostruct-align/1mmoD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-31661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t2k-w0.5.mod (nostruct-align/1mmoD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.646908
/projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-w0.5.mod(22):  Reading nostruct-align/1rb9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19111/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-w0.5.mod (nostruct-align/1rb9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.879858
/projects/compbio/experiments/models.97/pdb/1j/1j7iA/nostruct-align/1j7iA.t2k-w0.5.mod(21):  Reading nostruct-align/1j7iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-17269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7iA/nostruct-align/1j7iA.t2k-w0.5.mod (nostruct-align/1j7iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j7iA/nostruct-align/1j7iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.297852
/projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t2k-w0.5.mod(21):  Reading nostruct-align/1gggB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-5135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t2k-w0.5.mod (nostruct-align/1gggB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.749886
/projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t2k-w0.5.mod(21):  Reading nostruct-align/1mmoG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2170/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t2k-w0.5.mod (nostruct-align/1mmoG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.919891
/projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t2k-w0.5.mod(21):  Reading nostruct-align/1ddcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-11226/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t2k-w0.5.mod (nostruct-align/1ddcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.879887
/projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t2k-w0.5.mod(21):  Reading nostruct-align/1cnr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12119/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t2k-w0.5.mod (nostruct-align/1cnr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.463871
/projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t2k-w0.5.mod(21):  Reading nostruct-align/1wdnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-31910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t2k-w0.5.mod (nostruct-align/1wdnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.132879
/projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-w0.5.mod(22):  Reading nostruct-align/1mtyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21232/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-w0.5.mod (nostruct-align/1mtyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.339893
/projects/compbio/experiments/models.97/pdb/1j/1js3A/nostruct-align/1js3A.t2k-w0.5.mod(22):  Reading nostruct-align/1js3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5849/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1js3A/nostruct-align/1js3A.t2k-w0.5.mod (nostruct-align/1js3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1js3A/nostruct-align/1js3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.340870
/projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-w0.5.mod(22):  Reading nostruct-align/1mtyD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16650/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-w0.5.mod (nostruct-align/1mtyD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.409853
/projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-w0.5.mod(22):  Reading nostruct-align/1cnv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-10774/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-w0.5.mod (nostruct-align/1cnv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.634859
/projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-w0.5.mod(22):  Reading nostruct-align/1mtyG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23904/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-w0.5.mod (nostruct-align/1mtyG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.919891
/projects/compbio/experiments/models.97/pdb/1k/1ko9A/nostruct-align/1ko9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ko9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31022/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ko9A/nostruct-align/1ko9A.t2k-w0.5.mod (nostruct-align/1ko9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ko9A/nostruct-align/1ko9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.651903
/projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t2k-w0.5.mod(21):  Reading nostruct-align/2ztaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t2k-w0.5.mod (nostruct-align/2ztaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.713877
/projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t2k-w0.5.mod(21):  Reading nostruct-align/1bzkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-6087/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t2k-w0.5.mod (nostruct-align/1bzkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.076891
/projects/compbio/experiments/models.97/pdb/1e/1ei1A/nostruct-align/1ei1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ei1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3686/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei1A/nostruct-align/1ei1A.t2k-w0.5.mod (nostruct-align/1ei1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ei1A/nostruct-align/1ei1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.402859
/projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-w0.5.mod(21):  Reading nostruct-align/2bbkH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-w0.5.mod (nostruct-align/2bbkH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.393850
/projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t2k-w0.5.mod(22):  Reading nostruct-align/1thtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t2k-w0.5.mod (nostruct-align/1thtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.389887
/projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-w0.5.mod(22):  Reading nostruct-align/1fcyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-1006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-w0.5.mod (nostruct-align/1fcyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fcyA/nostruct-align/1fcyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.884855
/projects/compbio/experiments/models.97/pdb/1f/1fe7A/nostruct-align/1fe7A.t2k-w0.5.mod(21):  Reading nostruct-align/1fe7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6580/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fe7A/nostruct-align/1fe7A.t2k-w0.5.mod (nostruct-align/1fe7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fe7A/nostruct-align/1fe7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.997858
/projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-w0.5.mod(22):  Reading nostruct-align/2bbkL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1346/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-w0.5.mod (nostruct-align/2bbkL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.609900
/projects/compbio/experiments/models.97/pdb/1r/1ravA/nostruct-align/1ravA.t2k-w0.5.mod(21):  Reading nostruct-align/1ravA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26169/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ravA/nostruct-align/1ravA.t2k-w0.5.mod (nostruct-align/1ravA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ravA/nostruct-align/1ravA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.097866
/projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t2k-w0.5.mod(21):  Reading nostruct-align/1cof.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-13128/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t2k-w0.5.mod (nostruct-align/1cof.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.716885
/projects/compbio/experiments/models.97/pdb/1c/1coi/nostruct-align/1coi.t2k-w0.5.mod(21):  Reading nostruct-align/1coi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25914/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1coi/nostruct-align/1coi.t2k-w0.5.mod (nostruct-align/1coi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1coi/nostruct-align/1coi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.771877
/projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t2k-w0.5.mod(21):  Reading nostruct-align/1qlzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t2k-w0.5.mod (nostruct-align/1qlzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.561884
/projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t2k-w0.5.mod(21):  Reading nostruct-align/1b8wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-12476/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t2k-w0.5.mod (nostruct-align/1b8wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.190899
/projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t2k-w0.5.mod(21):  Reading nostruct-align/1u9aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30381/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t2k-w0.5.mod (nostruct-align/1u9aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.366880
/projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t2k-w0.5.mod(21):  Reading nostruct-align/1lxtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-15690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t2k-w0.5.mod (nostruct-align/1lxtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.937872
/projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t2k-w0.5.mod(21):  Reading nostruct-align/1vhiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-1335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t2k-w0.5.mod (nostruct-align/1vhiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.820877
/projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t2k-w0.5.mod(21):  Reading nostruct-align/1coo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t2k-w0.5.mod (nostruct-align/1coo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.082903
/projects/compbio/experiments/models.97/pdb/1e/1evfA/nostruct-align/1evfA.t2k-w0.5.mod(22):  Reading nostruct-align/1evfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7247/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evfA/nostruct-align/1evfA.t2k-w0.5.mod (nostruct-align/1evfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1evfA/nostruct-align/1evfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.271906
/projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t2k-w0.5.mod(22):  Reading nostruct-align/1cor.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-8477/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t2k-w0.5.mod (nostruct-align/1cor.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.422878
/projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t2k-w0.5.mod(22):  Reading nostruct-align/1hcnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-25094/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t2k-w0.5.mod (nostruct-align/1hcnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.004858
/projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t2k-w0.5.mod(22):  Reading nostruct-align/1hcnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28078/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t2k-w0.5.mod (nostruct-align/1hcnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.375896
/projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t2k-w0.5.mod(21):  Reading nostruct-align/1cot.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12259/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t2k-w0.5.mod (nostruct-align/1cot.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.080894
/projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t2k-w0.5.mod(21):  Reading nostruct-align/2a3dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-25793/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t2k-w0.5.mod (nostruct-align/2a3dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.894880
/projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-w0.5.mod(22):  Reading nostruct-align/1gp0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12919/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-w0.5.mod (nostruct-align/1gp0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gp0A/nostruct-align/1gp0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.585901
/projects/compbio/experiments/models.97/pdb/1f/1fyvA/nostruct-align/1fyvA.t2k-w0.5.mod(22):  Reading nostruct-align/1fyvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-1369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyvA/nostruct-align/1fyvA.t2k-w0.5.mod (nostruct-align/1fyvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fyvA/nostruct-align/1fyvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.757893
/projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t2k-w0.5.mod(21):  Reading nostruct-align/1ahjB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-9840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t2k-w0.5.mod (nostruct-align/1ahjB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.885908
/projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t2k-w0.5.mod(21):  Reading nostruct-align/1l92.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31698/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t2k-w0.5.mod (nostruct-align/1l92.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.642900
/projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t2k-w0.5.mod(22):  Reading nostruct-align/1cvrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t2k-w0.5.mod (nostruct-align/1cvrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.760908
/projects/compbio/experiments/models.97/pdb/1r/1rbp/nostruct-align/1rbp.t2k-w0.5.mod(21):  Reading nostruct-align/1rbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1008/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rbp/nostruct-align/1rbp.t2k-w0.5.mod (nostruct-align/1rbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rbp/nostruct-align/1rbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.163879
/projects/compbio/experiments/models.97/pdb/1d/1dt6A/nostruct-align/1dt6A.t2k-w0.5.mod(21):  Reading nostruct-align/1dt6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dt6A/nostruct-align/1dt6A.t2k-w0.5.mod (nostruct-align/1dt6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dt6A/nostruct-align/1dt6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.925867
/projects/compbio/experiments/models.97/pdb/1f/1f0xA/nostruct-align/1f0xA.t2k-w0.5.mod(22):  Reading nostruct-align/1f0xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0xA/nostruct-align/1f0xA.t2k-w0.5.mod (nostruct-align/1f0xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0xA/nostruct-align/1f0xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.147900
/projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t2k-w0.5.mod(21):  Reading nostruct-align/1bkzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-17729/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t2k-w0.5.mod (nostruct-align/1bkzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.668852
/projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t2k-w0.5.mod(21):  Reading nostruct-align/1nbmG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-1736/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t2k-w0.5.mod (nostruct-align/1nbmG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.941870
/projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t2k-w0.5.mod(21):  Reading nostruct-align/1b8xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29155/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t2k-w0.5.mod (nostruct-align/1b8xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.027880
/projects/compbio/experiments/models.97/pdb/1d/1dzaA/nostruct-align/1dzaA.t2k-w0.5.mod(21):  Reading nostruct-align/1dzaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-5542/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzaA/nostruct-align/1dzaA.t2k-w0.5.mod (nostruct-align/1dzaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dzaA/nostruct-align/1dzaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.046856
/projects/compbio/experiments/models.97/pdb/1h/1hykA/nostruct-align/1hykA.t2k-w0.5.mod(21):  Reading nostruct-align/1hykA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-26601/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hykA/nostruct-align/1hykA.t2k-w0.5.mod (nostruct-align/1hykA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hykA/nostruct-align/1hykA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.721886
/projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t2k-w0.5.mod(21):  Reading nostruct-align/1cpn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30723/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t2k-w0.5.mod (nostruct-align/1cpn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.859856
/projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t2k-w0.5.mod(22):  Reading nostruct-align/1cpo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20057/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t2k-w0.5.mod (nostruct-align/1cpo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.388853
/projects/compbio/experiments/models.97/pdb/1d/1ddeA/nostruct-align/1ddeA.t2k-w0.5.mod(21):  Reading nostruct-align/1ddeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11138/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddeA/nostruct-align/1ddeA.t2k-w0.5.mod (nostruct-align/1ddeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddeA/nostruct-align/1ddeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.075899
/projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k-w0.5.mod(22):  Reading nostruct-align/1cpq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-8595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k-w0.5.mod (nostruct-align/1cpq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.617870
/projects/compbio/experiments/models.97/pdb/2a/2afgA/nostruct-align/2afgA.t2k-w0.5.mod(21):  Reading nostruct-align/2afgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9907/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2afgA/nostruct-align/2afgA.t2k-w0.5.mod (nostruct-align/2afgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2afgA/nostruct-align/2afgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.005873
/projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t2k-w0.5.mod(21):  Reading nostruct-align/1cpt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-2370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t2k-w0.5.mod (nostruct-align/1cpt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.505901
/projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t2k-w0.5.mod(21):  Reading nostruct-align/1rcb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-12327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t2k-w0.5.mod (nostruct-align/1rcb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.478863
/projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t2k-w0.5.mod(21):  Reading nostruct-align/1rpjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t2k-w0.5.mod (nostruct-align/1rpjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.919861
/projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t2k-w0.5.mod(21):  Reading nostruct-align/1rcd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-7030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t2k-w0.5.mod (nostruct-align/1rcd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.018854
/projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t2k-w0.5.mod(22):  Reading nostruct-align/1gp1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t2k-w0.5.mod (nostruct-align/1gp1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.081875
/projects/compbio/experiments/models.97/pdb/2b/2bbmB/nostruct-align/2bbmB.t2k-w0.5.mod(21):  Reading nostruct-align/2bbmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-11240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbmB/nostruct-align/2bbmB.t2k-w0.5.mod (nostruct-align/2bbmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bbmB/nostruct-align/2bbmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.352861
/projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t2k-w0.5.mod(21):  Reading nostruct-align/1rcf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t2k-w0.5.mod (nostruct-align/1rcf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.809874
/projects/compbio/experiments/models.97/pdb/1h/1h7wA/nostruct-align/1h7wA.t2k-w0.5.mod(21):  Reading nostruct-align/1h7wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-653/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7wA/nostruct-align/1h7wA.t2k-w0.5.mod (nostruct-align/1h7wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7wA/nostruct-align/1h7wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.272911
/projects/compbio/experiments/models.97/pdb/1e/1eguA/nostruct-align/1eguA.t2k-w0.5.mod(22):  Reading nostruct-align/1eguA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eguA/nostruct-align/1eguA.t2k-w0.5.mod (nostruct-align/1eguA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eguA/nostruct-align/1eguA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.361881
/projects/compbio/experiments/models.97/pdb/1h/1h7wB/nostruct-align/1h7wB.t2k-w0.5.mod(21):  Reading nostruct-align/1h7wB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-23945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7wB/nostruct-align/1h7wB.t2k-w0.5.mod (nostruct-align/1h7wB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7wB/nostruct-align/1h7wB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.503885
/projects/compbio/experiments/models.97/pdb/1e/1e4sA/nostruct-align/1e4sA.t2k-w0.5.mod(21):  Reading nostruct-align/1e4sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-22654/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4sA/nostruct-align/1e4sA.t2k-w0.5.mod (nostruct-align/1e4sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4sA/nostruct-align/1e4sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.464888
/projects/compbio/experiments/models.97/pdb/1h/1h7wD/nostruct-align/1h7wD.t2k-w0.5.mod(21):  Reading nostruct-align/1h7wD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-15135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7wD/nostruct-align/1h7wD.t2k-w0.5.mod (nostruct-align/1h7wD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7wD/nostruct-align/1h7wD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.516882
/projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t2k-w0.5.mod(21):  Reading nostruct-align/1qg0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-31796/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t2k-w0.5.mod (nostruct-align/1qg0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.268902
/projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t2k-w0.5.mod(21):  Reading nostruct-align/1cvsC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-20850/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t2k-w0.5.mod (nostruct-align/1cvsC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -34.844856
/projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t2k-w0.5.mod(21):  Reading nostruct-align/451c.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-20772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t2k-w0.5.mod (nostruct-align/451c.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.669897
/projects/compbio/experiments/models.97/pdb/1d/1dryA/nostruct-align/1dryA.t2k-w0.5.mod(22):  Reading nostruct-align/1dryA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-1957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dryA/nostruct-align/1dryA.t2k-w0.5.mod (nostruct-align/1dryA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dryA/nostruct-align/1dryA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.789852
/projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k-w0.5.mod(22):  Reading nostruct-align/1f0yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k-w0.5.mod (nostruct-align/1f0yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0yA/nostruct-align/1f0yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.662880
/projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t2k-w0.5.mod(22):  Reading nostruct-align/1bm9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19086/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t2k-w0.5.mod (nostruct-align/1bm9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.284855
/projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t2k-w0.5.mod(21):  Reading nostruct-align/1rcy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-31071/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t2k-w0.5.mod (nostruct-align/1rcy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.376900
/projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t2k-w0.5.mod(21):  Reading nostruct-align/1hylA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-30000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t2k-w0.5.mod (nostruct-align/1hylA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.257902
/projects/compbio/experiments/models.97/pdb/1j/1j7lA/nostruct-align/1j7lA.t2k-w0.5.mod(22):  Reading nostruct-align/1j7lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21419/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7lA/nostruct-align/1j7lA.t2k-w0.5.mod (nostruct-align/1j7lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j7lA/nostruct-align/1j7lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.305901
/projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k-w0.5.mod(22):  Reading nostruct-align/1evhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6401/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k-w0.5.mod (nostruct-align/1evhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.958853
/projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t2k-w0.5.mod(21):  Reading nostruct-align/1d1dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-15059/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t2k-w0.5.mod (nostruct-align/1d1dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.909882
/projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t2k-w0.5.mod(21):  Reading nostruct-align/1cojA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-30179/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t2k-w0.5.mod (nostruct-align/1cojA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.490870
/projects/compbio/experiments/models.97/pdb/1g/1gntA/nostruct-align/1gntA.t2k-w0.5.mod(22):  Reading nostruct-align/1gntA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23141/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gntA/nostruct-align/1gntA.t2k-w0.5.mod (nostruct-align/1gntA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gntA/nostruct-align/1gntA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.826855
/projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t2k-w0.5.mod(21):  Reading nostruct-align/1rdg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-24416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t2k-w0.5.mod (nostruct-align/1rdg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.116901
/projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t2k-w0.5.mod(22):  Reading nostruct-align/1yna.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-4136/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t2k-w0.5.mod (nostruct-align/1yna.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.227880
/projects/compbio/experiments/models.97/pdb/1f/1fyxA/nostruct-align/1fyxA.t2k-w0.5.mod(22):  Reading nostruct-align/1fyxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-23171/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fyxA/nostruct-align/1fyxA.t2k-w0.5.mod (nostruct-align/1fyxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fyxA/nostruct-align/1fyxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.768867
/projects/compbio/experiments/models.97/pdb/1h/1h7xA/nostruct-align/1h7xA.t2k-w0.5.mod(21):  Reading nostruct-align/1h7xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-12604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xA/nostruct-align/1h7xA.t2k-w0.5.mod (nostruct-align/1h7xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7xA/nostruct-align/1h7xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.186895
/projects/compbio/experiments/models.97/pdb/1h/1h96A/nostruct-align/1h96A.t2k-w0.5.mod(22):  Reading nostruct-align/1h96A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-5640/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h96A/nostruct-align/1h96A.t2k-w0.5.mod (nostruct-align/1h96A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h96A/nostruct-align/1h96A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.540857
/projects/compbio/experiments/models.97/pdb/1g/1gp2G/nostruct-align/1gp2G.t2k-w0.5.mod(21):  Reading nostruct-align/1gp2G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17458/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp2G/nostruct-align/1gp2G.t2k-w0.5.mod (nostruct-align/1gp2G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gp2G/nostruct-align/1gp2G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.205887
/projects/compbio/experiments/models.97/pdb/1h/1h7xB/nostruct-align/1h7xB.t2k-w0.5.mod(21):  Reading nostruct-align/1h7xB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-15402/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xB/nostruct-align/1h7xB.t2k-w0.5.mod (nostruct-align/1h7xB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7xB/nostruct-align/1h7xB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.754910
/projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-w0.5.mod(22):  Reading nostruct-align/1jyaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11431/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-w0.5.mod (nostruct-align/1jyaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jyaA/nostruct-align/1jyaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.996895
/projects/compbio/experiments/models.97/pdb/1e/1e4tA/nostruct-align/1e4tA.t2k-w0.5.mod(21):  Reading nostruct-align/1e4tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-20283/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4tA/nostruct-align/1e4tA.t2k-w0.5.mod (nostruct-align/1e4tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4tA/nostruct-align/1e4tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.469912
/projects/compbio/experiments/models.97/pdb/1h/1h7xC/nostruct-align/1h7xC.t2k-w0.5.mod(21):  Reading nostruct-align/1h7xC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24731/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xC/nostruct-align/1h7xC.t2k-w0.5.mod (nostruct-align/1h7xC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7xC/nostruct-align/1h7xC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.165874
/projects/compbio/experiments/models.97/pdb/1h/1h7xD/nostruct-align/1h7xD.t2k-w0.5.mod(21):  Reading nostruct-align/1h7xD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7xD/nostruct-align/1h7xD.t2k-w0.5.mod (nostruct-align/1h7xD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7xD/nostruct-align/1h7xD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.908911
/projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t2k-w0.5.mod(21):  Reading nostruct-align/1mfiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-32251/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t2k-w0.5.mod (nostruct-align/1mfiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.037905
/projects/compbio/experiments/models.97/pdb/1f/1f28A/nostruct-align/1f28A.t2k-w0.5.mod(22):  Reading nostruct-align/1f28A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-22805/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f28A/nostruct-align/1f28A.t2k-w0.5.mod (nostruct-align/1f28A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f28A/nostruct-align/1f28A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.598867
/projects/compbio/experiments/models.97/pdb/1c/1crb/nostruct-align/1crb.t2k-w0.5.mod(21):  Reading nostruct-align/1crb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22800/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crb/nostruct-align/1crb.t2k-w0.5.mod (nostruct-align/1crb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1crb/nostruct-align/1crb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.327852
/projects/compbio/experiments/models.97/pdb/1f/1f0zA/nostruct-align/1f0zA.t2k-w0.5.mod(21):  Reading nostruct-align/1f0zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-3995/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f0zA/nostruct-align/1f0zA.t2k-w0.5.mod (nostruct-align/1f0zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f0zA/nostruct-align/1f0zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.634895
/projects/compbio/experiments/models.97/pdb/1j/1jceA/nostruct-align/1jceA.t2k-w0.5.mod(22):  Reading nostruct-align/1jceA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jceA/nostruct-align/1jceA.t2k-w0.5.mod (nostruct-align/1jceA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jceA/nostruct-align/1jceA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.226900
/projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t2k-w0.5.mod(22):  Reading nostruct-align/1rdr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11721/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t2k-w0.5.mod (nostruct-align/1rdr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.045885
/projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t2k-w0.5.mod(21):  Reading nostruct-align/1cb6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1383/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t2k-w0.5.mod (nostruct-align/1cb6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.921892
/projects/compbio/experiments/models.97/pdb/1r/1rds/nostruct-align/1rds.t2k-w0.5.mod(22):  Reading nostruct-align/1rds.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rds/nostruct-align/1rds.t2k-w0.5.mod (nostruct-align/1rds.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rds/nostruct-align/1rds.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.814882
/projects/compbio/experiments/models.97/pdb/1m/1mmsA/nostruct-align/1mmsA.t2k-w0.5.mod(22):  Reading nostruct-align/1mmsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-19505/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mmsA/nostruct-align/1mmsA.t2k-w0.5.mod (nostruct-align/1mmsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mmsA/nostruct-align/1mmsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.874870
/projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-w0.5.mod(22):  Reading nostruct-align/1b8zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-w0.5.mod (nostruct-align/1b8zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b8zA/nostruct-align/1b8zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.985870
/projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t2k-w0.5.mod(21):  Reading nostruct-align/1crl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-5474/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t2k-w0.5.mod (nostruct-align/1crl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.300852
/projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t2k-w0.5.mod(21):  Reading nostruct-align/1hymA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10393/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t2k-w0.5.mod (nostruct-align/1hymA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.197895
/projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t2k-w0.5.mod(21):  Reading nostruct-align/1ribA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t2k-w0.5.mod (nostruct-align/1ribA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.337906
/projects/compbio/experiments/models.97/pdb/1c/1crn/nostruct-align/1crn.t2k-w0.5.mod(21):  Reading nostruct-align/1crn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-15840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1crn/nostruct-align/1crn.t2k-w0.5.mod (nostruct-align/1crn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1crn/nostruct-align/1crn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.470905
/projects/compbio/experiments/models.97/pdb/1h/1hymB/nostruct-align/1hymB.t2k-w0.5.mod(21):  Reading nostruct-align/1hymB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-17343/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hymB/nostruct-align/1hymB.t2k-w0.5.mod (nostruct-align/1hymB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hymB/nostruct-align/1hymB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.341856
/projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k-w0.5.mod(22):  Reading nostruct-align/1g4iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28033/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k-w0.5.mod (nostruct-align/1g4iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g4iA/nostruct-align/1g4iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.269857
/projects/compbio/experiments/models.97/pdb/1k/1k51A/nostruct-align/1k51A.t2k-w0.5.mod(22):  Reading nostruct-align/1k51A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21909/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k51A/nostruct-align/1k51A.t2k-w0.5.mod (nostruct-align/1k51A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k51A/nostruct-align/1k51A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.991879
/projects/compbio/experiments/models.97/pdb/1d/1ddgA/nostruct-align/1ddgA.t2k-w0.5.mod(21):  Reading nostruct-align/1ddgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddgA/nostruct-align/1ddgA.t2k-w0.5.mod (nostruct-align/1ddgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddgA/nostruct-align/1ddgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.140854
/projects/compbio/experiments/models.97/pdb/1k/1k3sA/nostruct-align/1k3sA.t2k-w0.5.mod(22):  Reading nostruct-align/1k3sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14137/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3sA/nostruct-align/1k3sA.t2k-w0.5.mod (nostruct-align/1k3sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k3sA/nostruct-align/1k3sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.939854
/projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t2k-w0.5.mod(21):  Reading nostruct-align/1hcqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-10000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t2k-w0.5.mod (nostruct-align/1hcqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.454889
/projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t2k-w0.5.mod(22):  Reading nostruct-align/1rec.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-12280/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t2k-w0.5.mod (nostruct-align/1rec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.129904
/projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t2k-w0.5.mod(21):  Reading nostruct-align/1cokA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-31993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t2k-w0.5.mod (nostruct-align/1cokA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.657875
/projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-w0.5.mod(22):  Reading nostruct-align/1gnuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11686/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-w0.5.mod (nostruct-align/1gnuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gnuA/nostruct-align/1gnuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.962906
/projects/compbio/experiments/models.97/pdb/1d/1dkqA/nostruct-align/1dkqA.t2k-w0.5.mod(22):  Reading nostruct-align/1dkqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27015/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkqA/nostruct-align/1dkqA.t2k-w0.5.mod (nostruct-align/1dkqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkqA/nostruct-align/1dkqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.463909
/projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-w0.5.mod(22):  Reading nostruct-align/1h97A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20764/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-w0.5.mod (nostruct-align/1h97A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h97A/nostruct-align/1h97A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.372877
/projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-w0.5.mod(22):  Reading nostruct-align/1egwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-16239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-w0.5.mod (nostruct-align/1egwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egwA/nostruct-align/1egwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.057854
/projects/compbio/experiments/models.97/pdb/1e/1ei5A/nostruct-align/1ei5A.t2k-w0.5.mod(21):  Reading nostruct-align/1ei5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19391/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei5A/nostruct-align/1ei5A.t2k-w0.5.mod (nostruct-align/1ei5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ei5A/nostruct-align/1ei5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.792894
/projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-w0.5.mod(22):  Reading nostruct-align/1pinA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-w0.5.mod (nostruct-align/1pinA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.764851
/projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t2k-w0.5.mod(21):  Reading nostruct-align/2gar.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19376/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t2k-w0.5.mod (nostruct-align/2gar.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.028898
/projects/compbio/experiments/models.97/pdb/1e/1e4uA/nostruct-align/1e4uA.t2k-w0.5.mod(21):  Reading nostruct-align/1e4uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13143/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4uA/nostruct-align/1e4uA.t2k-w0.5.mod (nostruct-align/1e4uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4uA/nostruct-align/1e4uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.098886
/projects/compbio/experiments/models.97/pdb/2f/2fibA/nostruct-align/2fibA.t2k-w0.5.mod(22):  Reading nostruct-align/2fibA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-6171/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fibA/nostruct-align/2fibA.t2k-w0.5.mod (nostruct-align/2fibA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fibA/nostruct-align/2fibA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.845873
/projects/compbio/experiments/models.97/pdb/1j/1jcfA/nostruct-align/1jcfA.t2k-w0.5.mod(22):  Reading nostruct-align/1jcfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19457/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcfA/nostruct-align/1jcfA.t2k-w0.5.mod (nostruct-align/1jcfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jcfA/nostruct-align/1jcfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.439857
/projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t2k-w0.5.mod(21):  Reading nostruct-align/1dt9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-22475/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t2k-w0.5.mod (nostruct-align/1dt9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.874910
/projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t2k-w0.5.mod(21):  Reading nostruct-align/1hrdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-23615/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t2k-w0.5.mod (nostruct-align/1hrdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.898886
/projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t2k-w0.5.mod(21):  Reading nostruct-align/1res.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29305/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t2k-w0.5.mod (nostruct-align/1res.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.303890
/projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t2k-w0.5.mod(21):  Reading nostruct-align/1cb7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-12991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t2k-w0.5.mod (nostruct-align/1cb7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.144854
/projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t2k-w0.5.mod(21):  Reading nostruct-align/1aq5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-18160/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t2k-w0.5.mod (nostruct-align/1aq5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.522894
/projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t2k-w0.5.mod(21):  Reading nostruct-align/1ret.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t2k-w0.5.mod (nostruct-align/1ret.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.299852
/projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-w0.5.mod(21):  Reading nostruct-align/19hcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-16853/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-w0.5.mod (nostruct-align/19hcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.368874
/projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-w0.5.mod(22):  Reading nostruct-align/1csh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14547/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-w0.5.mod (nostruct-align/1csh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.581911
/projects/compbio/experiments/models.97/pdb/1j/1j7nA/nostruct-align/1j7nA.t2k-w0.5.mod(22):  Reading nostruct-align/1j7nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7nA/nostruct-align/1j7nA.t2k-w0.5.mod (nostruct-align/1j7nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j7nA/nostruct-align/1j7nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.806900
/projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t2k-w0.5.mod(21):  Reading nostruct-align/1csn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t2k-w0.5.mod (nostruct-align/1csn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.375858
/projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t2k-w0.5.mod(22):  Reading nostruct-align/1seiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28714/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t2k-w0.5.mod (nostruct-align/1seiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.878902
/projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t2k-w0.5.mod(22):  Reading nostruct-align/1hcrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14425/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t2k-w0.5.mod (nostruct-align/1hcrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.162857
/projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t2k-w0.5.mod(22):  Reading nostruct-align/1frpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t2k-w0.5.mod (nostruct-align/1frpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.705860
/projects/compbio/experiments/models.97/pdb/1j/1js8A/nostruct-align/1js8A.t2k-w0.5.mod(22):  Reading nostruct-align/1js8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18200/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1js8A/nostruct-align/1js8A.t2k-w0.5.mod (nostruct-align/1js8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1js8A/nostruct-align/1js8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.592892
/projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t2k-w0.5.mod(22):  Reading nostruct-align/1colA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20245/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t2k-w0.5.mod (nostruct-align/1colA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.293856
/projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t2k-w0.5.mod(21):  Reading nostruct-align/1dkrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-9893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t2k-w0.5.mod (nostruct-align/1dkrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.584862
/projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t2k-w0.5.mod(22):  Reading nostruct-align/1dm0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19554/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t2k-w0.5.mod (nostruct-align/1dm0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.365910
/projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t2k-w0.5.mod(21):  Reading nostruct-align/1bzpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t2k-w0.5.mod (nostruct-align/1bzpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.126854
/projects/compbio/experiments/models.97/pdb/2h/2hpaA/nostruct-align/2hpaA.t2k-w0.5.mod(22):  Reading nostruct-align/2hpaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26322/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hpaA/nostruct-align/2hpaA.t2k-w0.5.mod (nostruct-align/2hpaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hpaA/nostruct-align/2hpaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.573853
/projects/compbio/experiments/models.97/pdb/1h/1hynP/nostruct-align/1hynP.t2k-w0.5.mod(22):  Reading nostruct-align/1hynP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11147/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hynP/nostruct-align/1hynP.t2k-w0.5.mod (nostruct-align/1hynP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hynP/nostruct-align/1hynP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.906876
/projects/compbio/experiments/models.97/pdb/1h/1h98A/nostruct-align/1h98A.t2k-w0.5.mod(22):  Reading nostruct-align/1h98A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9592/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h98A/nostruct-align/1h98A.t2k-w0.5.mod (nostruct-align/1h98A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h98A/nostruct-align/1h98A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.519882
/projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k-w0.5.mod(21):  Reading nostruct-align/1h7zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-6879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k-w0.5.mod (nostruct-align/1h7zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h7zA/nostruct-align/1h7zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.781889
/projects/compbio/experiments/models.97/pdb/2g/2gbp/nostruct-align/2gbp.t2k-w0.5.mod(21):  Reading nostruct-align/2gbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27267/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gbp/nostruct-align/2gbp.t2k-w0.5.mod (nostruct-align/2gbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gbp/nostruct-align/2gbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.992889
/projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t2k-w0.5.mod(21):  Reading nostruct-align/1pioA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-15497/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t2k-w0.5.mod (nostruct-align/1pioA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.077900
/projects/compbio/experiments/models.97/pdb/1c/1cx4A/nostruct-align/1cx4A.t2k-w0.5.mod(21):  Reading nostruct-align/1cx4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-28409/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cx4A/nostruct-align/1cx4A.t2k-w0.5.mod (nostruct-align/1cx4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cx4A/nostruct-align/1cx4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.779886
/projects/compbio/experiments/models.97/pdb/1b/1bdtA/nostruct-align/1bdtA.t2k-w0.5.mod(21):  Reading nostruct-align/1bdtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-2292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdtA/nostruct-align/1bdtA.t2k-w0.5.mod (nostruct-align/1bdtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdtA/nostruct-align/1bdtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.824909
/projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t2k-w0.5.mod(22):  Reading nostruct-align/1qg3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20814/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t2k-w0.5.mod (nostruct-align/1qg3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.044897
/projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t2k-w0.5.mod(21):  Reading nostruct-align/1cb8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-23010/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t2k-w0.5.mod (nostruct-align/1cb8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.377857
/projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t2k-w0.5.mod(21):  Reading nostruct-align/1rfs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-28229/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t2k-w0.5.mod (nostruct-align/1rfs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.134855
/projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t2k-w0.5.mod(21):  Reading nostruct-align/1aoxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21636/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t2k-w0.5.mod (nostruct-align/1aoxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.471880
/projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t2k-w0.5.mod(21):  Reading nostruct-align/1aq6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-30609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t2k-w0.5.mod (nostruct-align/1aq6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.995882
/projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-w0.5.mod(22):  Reading nostruct-align/1ctf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24784/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-w0.5.mod (nostruct-align/1ctf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.630869
/projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t2k-w0.5.mod(22):  Reading nostruct-align/1rh4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-3570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t2k-w0.5.mod (nostruct-align/1rh4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.585875
/projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t2k-w0.5.mod(22):  Reading nostruct-align/3chy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-17924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t2k-w0.5.mod (nostruct-align/3chy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.983858
/projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k-w0.5.mod(22):  Reading nostruct-align/1ctj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-23442/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k-w0.5.mod (nostruct-align/1ctj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.158869
/projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-w0.5.mod(22):  Reading nostruct-align/1f8eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25075/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-w0.5.mod (nostruct-align/1f8eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f8eA/nostruct-align/1f8eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.831898
/projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t2k-w0.5.mod(21):  Reading nostruct-align/1ctl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-9461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t2k-w0.5.mod (nostruct-align/1ctl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.518885
/projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-w0.5.mod(22):  Reading nostruct-align/1hyoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28445/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-w0.5.mod (nostruct-align/1hyoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyoA/nostruct-align/1hyoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.942888
/projects/compbio/experiments/models.97/pdb/2g/2glsA/nostruct-align/2glsA.t2k-w0.5.mod(22):  Reading nostruct-align/2glsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-26206/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2glsA/nostruct-align/2glsA.t2k-w0.5.mod (nostruct-align/2glsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2glsA/nostruct-align/2glsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.591883
/projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t2k-w0.5.mod(21):  Reading nostruct-align/1ctn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-27258/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t2k-w0.5.mod (nostruct-align/1ctn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.857861
/projects/compbio/experiments/models.97/pdb/1k/1kh5A/nostruct-align/1kh5A.t2k-w0.5.mod(22):  Reading nostruct-align/1kh5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23537/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kh5A/nostruct-align/1kh5A.t2k-w0.5.mod (nostruct-align/1kh5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kh5A/nostruct-align/1kh5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.965881
/projects/compbio/experiments/models.97/pdb/4x/4xiaA/nostruct-align/4xiaA.t2k-w0.5.mod(21):  Reading nostruct-align/4xiaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31412/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4x/4xiaA/nostruct-align/4xiaA.t2k-w0.5.mod (nostruct-align/4xiaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4x/4xiaA/nostruct-align/4xiaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.841858
/projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t2k-w0.5.mod(21):  Reading nostruct-align/1cto.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-11926/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t2k-w0.5.mod (nostruct-align/1cto.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.438890
/projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t2k-w0.5.mod(21):  Reading nostruct-align/1e2o.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-2999/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t2k-w0.5.mod (nostruct-align/1e2o.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.182854
/projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t2k-w0.5.mod(21):  Reading nostruct-align/2gcc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t2k-w0.5.mod (nostruct-align/2gcc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.084885
/projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t2k-w0.5.mod(22):  Reading nostruct-align/1d1gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-2760/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t2k-w0.5.mod (nostruct-align/1d1gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.061890
/projects/compbio/experiments/models.97/pdb/1h/1he1A/nostruct-align/1he1A.t2k-w0.5.mod(22):  Reading nostruct-align/1he1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-7057/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1he1A/nostruct-align/1he1A.t2k-w0.5.mod (nostruct-align/1he1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1he1A/nostruct-align/1he1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.847902
/projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t2k-w0.5.mod(22):  Reading nostruct-align/1ctt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t2k-w0.5.mod (nostruct-align/1ctt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.943905
/projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t2k-w0.5.mod(21):  Reading nostruct-align/1gnwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7851/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t2k-w0.5.mod (nostruct-align/1gnwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.109852
/projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t2k-w0.5.mod(21):  Reading nostruct-align/3minB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-3466/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t2k-w0.5.mod (nostruct-align/3minB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.877874
/projects/compbio/experiments/models.97/pdb/1d/1dm1A/nostruct-align/1dm1A.t2k-w0.5.mod(22):  Reading nostruct-align/1dm1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-26591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm1A/nostruct-align/1dm1A.t2k-w0.5.mod (nostruct-align/1dm1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dm1A/nostruct-align/1dm1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.312889
/projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t2k-w0.5.mod(21):  Reading nostruct-align/3minC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-24376/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t2k-w0.5.mod (nostruct-align/3minC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.912889
/projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-w0.5.mod(22):  Reading nostruct-align/1cv8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5080/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-w0.5.mod (nostruct-align/1cv8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.027874
/projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t2k-w0.5.mod(21):  Reading nostruct-align/1sltA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-9596/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t2k-w0.5.mod (nostruct-align/1sltA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.662905
/projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t2k-w0.5.mod(21):  Reading nostruct-align/1sltB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-4831/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t2k-w0.5.mod (nostruct-align/1sltB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.643869
/projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-w0.5.mod(22):  Reading nostruct-align/1h99A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-20863/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-w0.5.mod (nostruct-align/1h99A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h99A/nostruct-align/1h99A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.401859
/projects/compbio/experiments/models.97/pdb/1e/1ei7A/nostruct-align/1ei7A.t2k-w0.5.mod(22):  Reading nostruct-align/1ei7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei7A/nostruct-align/1ei7A.t2k-w0.5.mod (nostruct-align/1ei7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ei7A/nostruct-align/1ei7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.278856
/projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t2k-w0.5.mod(21):  Reading nostruct-align/3erdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25210/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t2k-w0.5.mod (nostruct-align/3erdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.104855
/projects/compbio/experiments/models.97/pdb/1e/1ei7B/nostruct-align/1ei7B.t2k-w0.5.mod(21):  Reading nostruct-align/1ei7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-2474/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei7B/nostruct-align/1ei7B.t2k-w0.5.mod (nostruct-align/1ei7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ei7B/nostruct-align/1ei7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.185883
/projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t2k-w0.5.mod(21):  Reading nostruct-align/1rgs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31899/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t2k-w0.5.mod (nostruct-align/1rgs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.071857
/projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-w0.5.mod(22):  Reading nostruct-align/1inlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-21638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-w0.5.mod (nostruct-align/1inlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1inlA/nostruct-align/1inlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.281878
/projects/compbio/experiments/models.97/pdb/1c/1cuk/nostruct-align/1cuk.t2k-w0.5.mod(22):  Reading nostruct-align/1cuk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12746/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cuk/nostruct-align/1cuk.t2k-w0.5.mod (nostruct-align/1cuk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cuk/nostruct-align/1cuk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.687855
/projects/compbio/experiments/models.97/pdb/1d/1dzfA/nostruct-align/1dzfA.t2k-w0.5.mod(22):  Reading nostruct-align/1dzfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzfA/nostruct-align/1dzfA.t2k-w0.5.mod (nostruct-align/1dzfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dzfA/nostruct-align/1dzfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.015890
/projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-w0.5.mod(22):  Reading nostruct-align/1jl0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-w0.5.mod (nostruct-align/1jl0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jl0A/nostruct-align/1jl0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.727905
/projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-w0.5.mod(22):  Reading nostruct-align/1evlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3033/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-w0.5.mod (nostruct-align/1evlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1evlA/nostruct-align/1evlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.665863
/projects/compbio/experiments/models.97/pdb/1d/1ddjA/nostruct-align/1ddjA.t2k-w0.5.mod(21):  Reading nostruct-align/1ddjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16192/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddjA/nostruct-align/1ddjA.t2k-w0.5.mod (nostruct-align/1ddjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddjA/nostruct-align/1ddjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.420862
/projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t2k-w0.5.mod(21):  Reading nostruct-align/5ukdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25415/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t2k-w0.5.mod (nostruct-align/5ukdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.849873
/projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t2k-w0.5.mod(21):  Reading nostruct-align/1cur.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16750/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t2k-w0.5.mod (nostruct-align/1cur.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.201904
/projects/compbio/experiments/models.97/pdb/1d/1d1hA/nostruct-align/1d1hA.t2k-w0.5.mod(21):  Reading nostruct-align/1d1hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-9564/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1hA/nostruct-align/1d1hA.t2k-w0.5.mod (nostruct-align/1d1hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d1hA/nostruct-align/1d1hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.254890
/projects/compbio/experiments/models.97/pdb/1h/1he2A/nostruct-align/1he2A.t2k-w0.5.mod(21):  Reading nostruct-align/1he2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-10876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1he2A/nostruct-align/1he2A.t2k-w0.5.mod (nostruct-align/1he2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1he2A/nostruct-align/1he2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.537880
/projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t2k-w0.5.mod(21):  Reading nostruct-align/1cus.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-12664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t2k-w0.5.mod (nostruct-align/1cus.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.262877
/projects/compbio/experiments/models.97/pdb/1f/1frrA/nostruct-align/1frrA.t2k-w0.5.mod(21):  Reading nostruct-align/1frrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-18712/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frrA/nostruct-align/1frrA.t2k-w0.5.mod (nostruct-align/1frrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1frrA/nostruct-align/1frrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.050898
/projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t2k-w0.5.mod(21):  Reading nostruct-align/1pbgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-13468/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t2k-w0.5.mod (nostruct-align/1pbgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.593895
/projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-w0.5.mod(21):  Reading nostruct-align/1ia8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-31972/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-w0.5.mod (nostruct-align/1ia8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ia8A/nostruct-align/1ia8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.768908
/projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-w0.5.mod(22):  Reading nostruct-align/1gp6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-22936/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-w0.5.mod (nostruct-align/1gp6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gp6A/nostruct-align/1gp6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.980862
/projects/compbio/experiments/models.97/pdb/1r/1rhd/nostruct-align/1rhd.t2k-w0.5.mod(21):  Reading nostruct-align/1rhd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-4878/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhd/nostruct-align/1rhd.t2k-w0.5.mod (nostruct-align/1rhd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rhd/nostruct-align/1rhd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.444857
/projects/compbio/experiments/models.97/pdb/1r/1r092/nostruct-align/1r092.t2k-w0.5.mod(21):  Reading nostruct-align/1r092.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1r092/nostruct-align/1r092.t2k-w0.5.mod (nostruct-align/1r092.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1r092/nostruct-align/1r092.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.516851
/projects/compbio/experiments/models.97/pdb/1k/1knaA/nostruct-align/1knaA.t2k-w0.5.mod(22):  Reading nostruct-align/1knaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20254/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knaA/nostruct-align/1knaA.t2k-w0.5.mod (nostruct-align/1knaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1knaA/nostruct-align/1knaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.123896
/projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-w0.5.mod(22):  Reading nostruct-align/2gdm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-w0.5.mod (nostruct-align/2gdm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.938889
/projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t2k-w0.5.mod(21):  Reading nostruct-align/1dktB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29216/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t2k-w0.5.mod (nostruct-align/1dktB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.111855
/projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-w0.5.mod(22):  Reading nostruct-align/1sluA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19032/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-w0.5.mod (nostruct-align/1sluA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.312897
/projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t2k-w0.5.mod(21):  Reading nostruct-align/4ull.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6644/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t2k-w0.5.mod (nostruct-align/4ull.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.437904
/projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t2k-w0.5.mod(21):  Reading nostruct-align/1ahpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t2k-w0.5.mod (nostruct-align/1ahpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.841869
/projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-w0.5.mod(22):  Reading nostruct-align/1jyeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-4263/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-w0.5.mod (nostruct-align/1jyeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jyeA/nostruct-align/1jyeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.943878
/projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t2k-w0.5.mod(21):  Reading nostruct-align/2gf1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31250/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t2k-w0.5.mod (nostruct-align/2gf1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.263885
/projects/compbio/experiments/models.97/pdb/1b/1bf4A/nostruct-align/1bf4A.t2k-w0.5.mod(21):  Reading nostruct-align/1bf4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27789/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf4A/nostruct-align/1bf4A.t2k-w0.5.mod (nostruct-align/1bf4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bf4A/nostruct-align/1bf4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.724861
/projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-w0.5.mod(22):  Reading nostruct-align/1mfmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-22894/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-w0.5.mod (nostruct-align/1mfmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.513882
/projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-w0.5.mod(22):  Reading nostruct-align/1rhs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-w0.5.mod (nostruct-align/1rhs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.525908
/projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t2k-w0.5.mod(21):  Reading nostruct-align/1aozA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-32157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t2k-w0.5.mod (nostruct-align/1aozA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.999874
/projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-w0.5.mod(22):  Reading nostruct-align/1jl1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9200/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-w0.5.mod (nostruct-align/1jl1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jl1A/nostruct-align/1jl1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.860867
/projects/compbio/experiments/models.97/pdb/1f/1f8gA/nostruct-align/1f8gA.t2k-w0.5.mod(22):  Reading nostruct-align/1f8gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4705/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8gA/nostruct-align/1f8gA.t2k-w0.5.mod (nostruct-align/1f8gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f8gA/nostruct-align/1f8gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.633860
/projects/compbio/experiments/models.97/pdb/1j/1jjsA/nostruct-align/1jjsA.t2k-w0.5.mod(21):  Reading nostruct-align/1jjsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10803/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjsA/nostruct-align/1jjsA.t2k-w0.5.mod (nostruct-align/1jjsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjsA/nostruct-align/1jjsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.622904
/projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t2k-w0.5.mod(21):  Reading nostruct-align/1cvl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-32305/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t2k-w0.5.mod (nostruct-align/1cvl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.809868
/projects/compbio/experiments/models.97/pdb/2c/2cmkA/nostruct-align/2cmkA.t2k-w0.5.mod(21):  Reading nostruct-align/2cmkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-32157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cmkA/nostruct-align/2cmkA.t2k-w0.5.mod (nostruct-align/2cmkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cmkA/nostruct-align/2cmkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.484877
/projects/compbio/experiments/models.97/pdb/1h/1hyqA/nostruct-align/1hyqA.t2k-w0.5.mod(21):  Reading nostruct-align/1hyqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-14588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyqA/nostruct-align/1hyqA.t2k-w0.5.mod (nostruct-align/1hyqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyqA/nostruct-align/1hyqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.810865
/projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t2k-w0.5.mod(21):  Reading nostruct-align/1awcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-4947/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t2k-w0.5.mod (nostruct-align/1awcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.300873
/projects/compbio/experiments/models.97/pdb/1a/1awcB/nostruct-align/1awcB.t2k-w0.5.mod(21):  Reading nostruct-align/1awcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-29607/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awcB/nostruct-align/1awcB.t2k-w0.5.mod (nostruct-align/1awcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awcB/nostruct-align/1awcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.607891
/projects/compbio/experiments/models.97/pdb/1g/1g4mA/nostruct-align/1g4mA.t2k-w0.5.mod(22):  Reading nostruct-align/1g4mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-31489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4mA/nostruct-align/1g4mA.t2k-w0.5.mod (nostruct-align/1g4mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g4mA/nostruct-align/1g4mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.050867
/projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-w0.5.mod(22):  Reading nostruct-align/1k55A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-w0.5.mod (nostruct-align/1k55A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k55A/nostruct-align/1k55A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.098896
/projects/compbio/experiments/models.97/pdb/1h/1hcuA/nostruct-align/1hcuA.t2k-w0.5.mod(21):  Reading nostruct-align/1hcuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-7998/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcuA/nostruct-align/1hcuA.t2k-w0.5.mod (nostruct-align/1hcuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcuA/nostruct-align/1hcuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.202902
/projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t2k-w0.5.mod(21):  Reading nostruct-align/1ft1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-18487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t2k-w0.5.mod (nostruct-align/1ft1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.419897
/projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t2k-w0.5.mod(21):  Reading nostruct-align/1ft1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29469/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t2k-w0.5.mod (nostruct-align/1ft1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.609852
/projects/compbio/experiments/models.97/pdb/1c/1c5cH/nostruct-align/1c5cH.t2k-w0.5.mod(21):  Reading nostruct-align/1c5cH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-21222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5cH/nostruct-align/1c5cH.t2k-w0.5.mod (nostruct-align/1c5cH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c5cH/nostruct-align/1c5cH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.756889
/projects/compbio/experiments/models.97/pdb/1i/1ia9A/nostruct-align/1ia9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ia9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-17671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ia9A/nostruct-align/1ia9A.t2k-w0.5.mod (nostruct-align/1ia9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ia9A/nostruct-align/1ia9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.104877
/projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t2k-w0.5.mod(22):  Reading nostruct-align/1rie.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t2k-w0.5.mod (nostruct-align/1rie.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.770882
/projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-w0.5.mod(22):  Reading nostruct-align/1gnyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20569/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-w0.5.mod (nostruct-align/1gnyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gnyA/nostruct-align/1gnyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.457878
/projects/compbio/experiments/models.97/pdb/1c/1c5cL/nostruct-align/1c5cL.t2k-w0.5.mod(21):  Reading nostruct-align/1c5cL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18088/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5cL/nostruct-align/1c5cL.t2k-w0.5.mod (nostruct-align/1c5cL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c5cL/nostruct-align/1c5cL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.616901
/projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t2k-w0.5.mod(22):  Reading nostruct-align/1dkuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t2k-w0.5.mod (nostruct-align/1dkuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.348900
/projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t2k-w0.5.mod(21):  Reading nostruct-align/1sn4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-26565/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t2k-w0.5.mod (nostruct-align/1sn4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.012852
/projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t2k-w0.5.mod(21):  Reading nostruct-align/1slvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-9640/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t2k-w0.5.mod (nostruct-align/1slvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.050869
/projects/compbio/experiments/models.97/pdb/1b/1bzsA/nostruct-align/1bzsA.t2k-w0.5.mod(21):  Reading nostruct-align/1bzsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-32767/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzsA/nostruct-align/1bzsA.t2k-w0.5.mod (nostruct-align/1bzsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bzsA/nostruct-align/1bzsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.872866
/projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ei9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3872/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t2k-w0.5.mod (nostruct-align/1ei9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.854868
/projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t2k-w0.5.mod(21):  Reading nostruct-align/1ysc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-19245/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t2k-w0.5.mod (nostruct-align/1ysc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.635864
/projects/compbio/experiments/models.97/pdb/1e/1e4yA/nostruct-align/1e4yA.t2k-w0.5.mod(21):  Reading nostruct-align/1e4yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-28893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e4yA/nostruct-align/1e4yA.t2k-w0.5.mod (nostruct-align/1e4yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e4yA/nostruct-align/1e4yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.872900
/projects/compbio/experiments/models.97/pdb/1b/1bf5A/nostruct-align/1bf5A.t2k-w0.5.mod(22):  Reading nostruct-align/1bf5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18238/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf5A/nostruct-align/1bf5A.t2k-w0.5.mod (nostruct-align/1bf5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bf5A/nostruct-align/1bf5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.523901
/projects/compbio/experiments/models.97/pdb/1b/1b1uA/nostruct-align/1b1uA.t2k-w0.5.mod(22):  Reading nostruct-align/1b1uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-13453/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1uA/nostruct-align/1b1uA.t2k-w0.5.mod (nostruct-align/1b1uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b1uA/nostruct-align/1b1uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.955887
/projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t2k-w0.5.mod(21):  Reading nostruct-align/1rip.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-15021/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t2k-w0.5.mod (nostruct-align/1rip.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.841879
/projects/compbio/experiments/models.97/pdb/1q/1qg6A/nostruct-align/1qg6A.t2k-w0.5.mod(21):  Reading nostruct-align/1qg6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1203/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg6A/nostruct-align/1qg6A.t2k-w0.5.mod (nostruct-align/1qg6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qg6A/nostruct-align/1qg6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.197872
/projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t2k-w0.5.mod(22):  Reading nostruct-align/1qexA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t2k-w0.5.mod (nostruct-align/1qexA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.666876
/projects/compbio/experiments/models.97/pdb/1u/1ueaB/nostruct-align/1ueaB.t2k-w0.5.mod(21):  Reading nostruct-align/1ueaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3225/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1ueaB/nostruct-align/1ueaB.t2k-w0.5.mod (nostruct-align/1ueaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1ueaB/nostruct-align/1ueaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.965853
/projects/compbio/experiments/models.97/pdb/1h/1hrhA/nostruct-align/1hrhA.t2k-w0.5.mod(21):  Reading nostruct-align/1hrhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-3688/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrhA/nostruct-align/1hrhA.t2k-w0.5.mod (nostruct-align/1hrhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hrhA/nostruct-align/1hrhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.114901
/projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t2k-w0.5.mod(21):  Reading nostruct-align/1ris.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-19033/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t2k-w0.5.mod (nostruct-align/1ris.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.977898
/projects/compbio/experiments/models.97/pdb/2p/2pvaA/nostruct-align/2pvaA.t2k-w0.5.mod(22):  Reading nostruct-align/2pvaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5888/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pvaA/nostruct-align/2pvaA.t2k-w0.5.mod (nostruct-align/2pvaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pvaA/nostruct-align/2pvaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.110886
/projects/compbio/experiments/models.97/pdb/1i/1innA/nostruct-align/1innA.t2k-w0.5.mod(22):  Reading nostruct-align/1innA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1innA/nostruct-align/1innA.t2k-w0.5.mod (nostruct-align/1innA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1innA/nostruct-align/1innA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.234859
/projects/compbio/experiments/models.97/pdb/1j/1jl2A/nostruct-align/1jl2A.t2k-w0.5.mod(22):  Reading nostruct-align/1jl2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-6100/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl2A/nostruct-align/1jl2A.t2k-w0.5.mod (nostruct-align/1jl2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jl2A/nostruct-align/1jl2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.429865
/projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k-w0.5.mod(22):  Reading nostruct-align/1jjtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22052/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k-w0.5.mod (nostruct-align/1jjtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjtA/nostruct-align/1jjtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.701900
/projects/compbio/experiments/models.97/pdb/1j/1j7rA/nostruct-align/1j7rA.t2k-w0.5.mod(21):  Reading nostruct-align/1j7rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-26168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7rA/nostruct-align/1j7rA.t2k-w0.5.mod (nostruct-align/1j7rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j7rA/nostruct-align/1j7rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.084900
/projects/compbio/experiments/models.97/pdb/1j/1j90A/nostruct-align/1j90A.t2k-w0.5.mod(22):  Reading nostruct-align/1j90A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-13773/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j90A/nostruct-align/1j90A.t2k-w0.5.mod (nostruct-align/1j90A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j90A/nostruct-align/1j90A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.619871
/projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t2k-w0.5.mod(22):  Reading nostruct-align/1b33N.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-9676/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t2k-w0.5.mod (nostruct-align/1b33N.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.149899
/projects/compbio/experiments/models.97/pdb/1d/1ddlA/nostruct-align/1ddlA.t2k-w0.5.mod(22):  Reading nostruct-align/1ddlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31781/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddlA/nostruct-align/1ddlA.t2k-w0.5.mod (nostruct-align/1ddlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddlA/nostruct-align/1ddlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.168896
/projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t2k-w0.5.mod(21):  Reading nostruct-align/1semA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-2255/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t2k-w0.5.mod (nostruct-align/1semA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.362873
/projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t2k-w0.5.mod(21):  Reading nostruct-align/1bsjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-25595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t2k-w0.5.mod (nostruct-align/1bsjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.369877
/projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-w0.5.mod(22):  Reading nostruct-align/3cla.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19429/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-w0.5.mod (nostruct-align/3cla.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.109894
/projects/compbio/experiments/models.97/pdb/1p/1pbiA/nostruct-align/1pbiA.t2k-w0.5.mod(21):  Reading nostruct-align/1pbiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-24123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbiA/nostruct-align/1pbiA.t2k-w0.5.mod (nostruct-align/1pbiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pbiA/nostruct-align/1pbiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.054911
/projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k-w0.5.mod(21):  Reading nostruct-align/1tc1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-1786/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k-w0.5.mod (nostruct-align/1tc1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.602869
/projects/compbio/experiments/models.97/pdb/1g/1gp8A/nostruct-align/1gp8A.t2k-w0.5.mod(21):  Reading nostruct-align/1gp8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gp8A/nostruct-align/1gp8A.t2k-w0.5.mod (nostruct-align/1gp8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gp8A/nostruct-align/1gp8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.533899
/projects/compbio/experiments/models.97/pdb/1k/1kncA/nostruct-align/1kncA.t2k-w0.5.mod(22):  Reading nostruct-align/1kncA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27912/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kncA/nostruct-align/1kncA.t2k-w0.5.mod (nostruct-align/1kncA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kncA/nostruct-align/1kncA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.892855
/projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t2k-w0.5.mod(21):  Reading nostruct-align/1copD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-10679/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t2k-w0.5.mod (nostruct-align/1copD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.522861
/projects/compbio/experiments/models.97/pdb/3c/3cln/nostruct-align/3cln.t2k-w0.5.mod(21):  Reading nostruct-align/3cln.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-14953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cln/nostruct-align/3cln.t2k-w0.5.mod (nostruct-align/3cln.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3cln/nostruct-align/3cln.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.787851
/projects/compbio/experiments/models.97/pdb/1y/1ytc/nostruct-align/1ytc.t2k-w0.5.mod(21):  Reading nostruct-align/1ytc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytc/nostruct-align/1ytc.t2k-w0.5.mod (nostruct-align/1ytc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytc/nostruct-align/1ytc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.961868
/projects/compbio/experiments/models.97/pdb/1e/1e68A/nostruct-align/1e68A.t2k-w0.5.mod(21):  Reading nostruct-align/1e68A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-5334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e68A/nostruct-align/1e68A.t2k-w0.5.mod (nostruct-align/1e68A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e68A/nostruct-align/1e68A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.460886
/projects/compbio/experiments/models.97/pdb/1c/1cx8A/nostruct-align/1cx8A.t2k-w0.5.mod(21):  Reading nostruct-align/1cx8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-10058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cx8A/nostruct-align/1cx8A.t2k-w0.5.mod (nostruct-align/1cx8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cx8A/nostruct-align/1cx8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.766865
/projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t2k-w0.5.mod(21):  Reading nostruct-align/1cx8B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26269/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t2k-w0.5.mod (nostruct-align/1cx8B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.678877
/projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k-w0.5.mod(21):  Reading nostruct-align/1bf6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26519/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k-w0.5.mod (nostruct-align/1bf6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bf6A/nostruct-align/1bf6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.410910
/projects/compbio/experiments/models.97/pdb/1b/1b1vA/nostruct-align/1b1vA.t2k-w0.5.mod(21):  Reading nostruct-align/1b1vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-25432/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b1vA/nostruct-align/1b1vA.t2k-w0.5.mod (nostruct-align/1b1vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b1vA/nostruct-align/1b1vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.944876
/projects/compbio/experiments/models.97/pdb/1q/1qg7A/nostruct-align/1qg7A.t2k-w0.5.mod(21):  Reading nostruct-align/1qg7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg7A/nostruct-align/1qg7A.t2k-w0.5.mod (nostruct-align/1qg7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qg7A/nostruct-align/1qg7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.547890
/projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t2k-w0.5.mod(21):  Reading nostruct-align/1qeyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-1529/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t2k-w0.5.mod (nostruct-align/1qeyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.852888
/projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t2k-w0.5.mod(21):  Reading nostruct-align/1b34B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-25923/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t2k-w0.5.mod (nostruct-align/1b34B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.224859
/projects/compbio/experiments/models.97/pdb/1c/1cxc/nostruct-align/1cxc.t2k-w0.5.mod(21):  Reading nostruct-align/1cxc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-28034/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxc/nostruct-align/1cxc.t2k-w0.5.mod (nostruct-align/1cxc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxc/nostruct-align/1cxc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.827908
/projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-w0.5.mod(22):  Reading nostruct-align/2pvbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-w0.5.mod (nostruct-align/2pvbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.739861
/projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t2k-w0.5.mod(21):  Reading nostruct-align/1tpfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-18926/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t2k-w0.5.mod (nostruct-align/1tpfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.917868
/projects/compbio/experiments/models.97/pdb/1y/1ytn/nostruct-align/1ytn.t2k-w0.5.mod(21):  Reading nostruct-align/1ytn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytn/nostruct-align/1ytn.t2k-w0.5.mod (nostruct-align/1ytn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytn/nostruct-align/1ytn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.489895
/projects/compbio/experiments/models.97/pdb/1j/1jl3A/nostruct-align/1jl3A.t2k-w0.5.mod(22):  Reading nostruct-align/1jl3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl3A/nostruct-align/1jl3A.t2k-w0.5.mod (nostruct-align/1jl3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jl3A/nostruct-align/1jl3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.155903
/projects/compbio/experiments/models.97/pdb/1j/1jjuA/nostruct-align/1jjuA.t2k-w0.5.mod(22):  Reading nostruct-align/1jjuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjuA/nostruct-align/1jjuA.t2k-w0.5.mod (nostruct-align/1jjuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjuA/nostruct-align/1jjuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.079905
/projects/compbio/experiments/models.97/pdb/1j/1jjuB/nostruct-align/1jjuB.t2k-w0.5.mod(22):  Reading nostruct-align/1jjuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjuB/nostruct-align/1jjuB.t2k-w0.5.mod (nostruct-align/1jjuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjuB/nostruct-align/1jjuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.318899
/projects/compbio/experiments/models.97/pdb/1j/1jjuC/nostruct-align/1jjuC.t2k-w0.5.mod(22):  Reading nostruct-align/1jjuC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-2945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjuC/nostruct-align/1jjuC.t2k-w0.5.mod (nostruct-align/1jjuC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjuC/nostruct-align/1jjuC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.765871
/projects/compbio/experiments/models.97/pdb/1y/1yts/nostruct-align/1yts.t2k-w0.5.mod(22):  Reading nostruct-align/1yts.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-20920/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yts/nostruct-align/1yts.t2k-w0.5.mod (nostruct-align/1yts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yts/nostruct-align/1yts.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.043890
/projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-w0.5.mod(22):  Reading nostruct-align/1c5eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-31829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-w0.5.mod (nostruct-align/1c5eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.464888
/projects/compbio/experiments/models.97/pdb/1g/1ggqA/nostruct-align/1ggqA.t2k-w0.5.mod(21):  Reading nostruct-align/1ggqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9494/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggqA/nostruct-align/1ggqA.t2k-w0.5.mod (nostruct-align/1ggqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ggqA/nostruct-align/1ggqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.784874
/projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t2k-w0.5.mod(22):  Reading nostruct-align/1vhrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t2k-w0.5.mod (nostruct-align/1vhrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.888851
/projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t2k-w0.5.mod(22):  Reading nostruct-align/1ytw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-19164/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t2k-w0.5.mod (nostruct-align/1ytw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.800905
/projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t2k-w0.5.mod(21):  Reading nostruct-align/32c2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12294/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t2k-w0.5.mod (nostruct-align/32c2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.019890
/projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t2k-w0.5.mod(21):  Reading nostruct-align/1kal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-20761/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t2k-w0.5.mod (nostruct-align/1kal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.727884
/projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t2k-w0.5.mod(21):  Reading nostruct-align/1rkd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-15548/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t2k-w0.5.mod (nostruct-align/1rkd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.011892
/projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t2k-w0.5.mod(21):  Reading nostruct-align/1kao.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-29046/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t2k-w0.5.mod (nostruct-align/1kao.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.245872
/projects/compbio/experiments/models.97/pdb/1d/1dm5A/nostruct-align/1dm5A.t2k-w0.5.mod(22):  Reading nostruct-align/1dm5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12385/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm5A/nostruct-align/1dm5A.t2k-w0.5.mod (nostruct-align/1dm5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dm5A/nostruct-align/1dm5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.144907
/projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t2k-w0.5.mod(21):  Reading nostruct-align/6pfkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-18735/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t2k-w0.5.mod (nostruct-align/6pfkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.084900
/projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t2k-w0.5.mod(22):  Reading nostruct-align/1ahsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-1744/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t2k-w0.5.mod (nostruct-align/1ahsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.106899
/projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t2k-w0.5.mod(21):  Reading nostruct-align/1kas.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-20529/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t2k-w0.5.mod (nostruct-align/1kas.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.176874
/projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-w0.5.mod(22):  Reading nostruct-align/1jyhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-w0.5.mod (nostruct-align/1jyhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jyhA/nostruct-align/1jyhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.940865
/projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t2k-w0.5.mod(21):  Reading nostruct-align/1yua.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-10642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t2k-w0.5.mod (nostruct-align/1yua.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.830889
/projects/compbio/experiments/models.97/pdb/1e/1e69B/nostruct-align/1e69B.t2k-w0.5.mod(21):  Reading nostruct-align/1e69B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11108/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e69B/nostruct-align/1e69B.t2k-w0.5.mod (nostruct-align/1e69B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e69B/nostruct-align/1e69B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.945877
/projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t2k-w0.5.mod(21):  Reading nostruct-align/1bdyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-16360/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t2k-w0.5.mod (nostruct-align/1bdyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.296858
/projects/compbio/experiments/models.97/pdb/1i/1i4dA/nostruct-align/1i4dA.t2k-w0.5.mod(22):  Reading nostruct-align/1i4dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4dA/nostruct-align/1i4dA.t2k-w0.5.mod (nostruct-align/1i4dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4dA/nostruct-align/1i4dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.042852
/projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t2k-w0.5.mod(22):  Reading nostruct-align/1b35A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-7964/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t2k-w0.5.mod (nostruct-align/1b35A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.687902
/projects/compbio/experiments/models.97/pdb/1y/1yuf/nostruct-align/1yuf.t2k-w0.5.mod(21):  Reading nostruct-align/1yuf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-18293/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1yuf/nostruct-align/1yuf.t2k-w0.5.mod (nostruct-align/1yuf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1yuf/nostruct-align/1yuf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.698906
/projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-w0.5.mod(22):  Reading nostruct-align/1qg8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-26511/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-w0.5.mod (nostruct-align/1qg8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.016903
/projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t2k-w0.5.mod(22):  Reading nostruct-align/1b35B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t2k-w0.5.mod (nostruct-align/1b35B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.249899
/projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t2k-w0.5.mod(21):  Reading nostruct-align/1kay.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-4274/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t2k-w0.5.mod (nostruct-align/1kay.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.118858
/projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t2k-w0.5.mod(22):  Reading nostruct-align/1b35C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-17095/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t2k-w0.5.mod (nostruct-align/1b35C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.557905
/projects/compbio/experiments/models.97/pdb/1j/1jclA/nostruct-align/1jclA.t2k-w0.5.mod(22):  Reading nostruct-align/1jclA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15547/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jclA/nostruct-align/1jclA.t2k-w0.5.mod (nostruct-align/1jclA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jclA/nostruct-align/1jclA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.294886
/projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t2k-w0.5.mod(21):  Reading nostruct-align/3cms.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-15174/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t2k-w0.5.mod (nostruct-align/3cms.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.762850
/projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t2k-w0.5.mod(22):  Reading nostruct-align/1b35D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-22244/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t2k-w0.5.mod (nostruct-align/1b35D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.997911
/projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t2k-w0.5.mod(21):  Reading nostruct-align/1cyi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-8209/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t2k-w0.5.mod (nostruct-align/1cyi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.918871
/projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t2k-w0.5.mod(21):  Reading nostruct-align/1cyj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-26287/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t2k-w0.5.mod (nostruct-align/1cyj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.097906
/projects/compbio/experiments/models.97/pdb/1j/1jjvA/nostruct-align/1jjvA.t2k-w0.5.mod(22):  Reading nostruct-align/1jjvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjvA/nostruct-align/1jjvA.t2k-w0.5.mod (nostruct-align/1jjvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjvA/nostruct-align/1jjvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.722908
/projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k-w0.5.mod(22):  Reading nostruct-align/1cyo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28518/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k-w0.5.mod (nostruct-align/1cyo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.136883
/projects/compbio/experiments/models.97/pdb/1d/1ddnA/nostruct-align/1ddnA.t2k-w0.5.mod(21):  Reading nostruct-align/1ddnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-14085/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddnA/nostruct-align/1ddnA.t2k-w0.5.mod (nostruct-align/1ddnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddnA/nostruct-align/1ddnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.893883
/projects/compbio/experiments/models.97/pdb/1h/1hcxA/nostruct-align/1hcxA.t2k-w0.5.mod(22):  Reading nostruct-align/1hcxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20971/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hcxA/nostruct-align/1hcxA.t2k-w0.5.mod (nostruct-align/1hcxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hcxA/nostruct-align/1hcxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.951899
/projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t2k-w0.5.mod(21):  Reading nostruct-align/1mucA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27089/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t2k-w0.5.mod (nostruct-align/1mucA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.200869
/projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t2k-w0.5.mod(21):  Reading nostruct-align/2afpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27288/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t2k-w0.5.mod (nostruct-align/2afpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.967882
/projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t2k-w0.5.mod(21):  Reading nostruct-align/1frvB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t2k-w0.5.mod (nostruct-align/1frvB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.539879
/projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t2k-w0.5.mod(22):  Reading nostruct-align/2bbvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t2k-w0.5.mod (nostruct-align/2bbvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.211882
/projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t2k-w0.5.mod(22):  Reading nostruct-align/1tc3C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-18105/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t2k-w0.5.mod (nostruct-align/1tc3C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.358879
/projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t2k-w0.5.mod(21):  Reading nostruct-align/1tph1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-20669/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t2k-w0.5.mod (nostruct-align/1tph1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.748886
/projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t2k-w0.5.mod(21):  Reading nostruct-align/1cyx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-19395/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t2k-w0.5.mod (nostruct-align/1cyx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.672880
/projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t2k-w0.5.mod(21):  Reading nostruct-align/2bbvC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-28663/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t2k-w0.5.mod (nostruct-align/2bbvC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.292871
/projects/compbio/experiments/models.97/pdb/1d/1dkxA/nostruct-align/1dkxA.t2k-w0.5.mod(21):  Reading nostruct-align/1dkxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-27030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkxA/nostruct-align/1dkxA.t2k-w0.5.mod (nostruct-align/1dkxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkxA/nostruct-align/1dkxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.084900
/projects/compbio/experiments/models.97/pdb/1q/1qg9A/nostruct-align/1qg9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qg9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qg9A/nostruct-align/1qg9A.t2k-w0.5.mod (nostruct-align/1qg9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qg9A/nostruct-align/1qg9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.815903
/projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t2k-w0.5.mod(21):  Reading nostruct-align/1ahtH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-32224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t2k-w0.5.mod (nostruct-align/1ahtH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.287865
/projects/compbio/experiments/models.97/pdb/1h/1hrkA/nostruct-align/1hrkA.t2k-w0.5.mod(21):  Reading nostruct-align/1hrkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25845/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrkA/nostruct-align/1hrkA.t2k-w0.5.mod (nostruct-align/1hrkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hrkA/nostruct-align/1hrkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.575897
/projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t2k-w0.5.mod(22):  Reading nostruct-align/1rlr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t2k-w0.5.mod (nostruct-align/1rlr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.872852
/projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t2k-w0.5.mod(21):  Reading nostruct-align/1ahtL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t2k-w0.5.mod (nostruct-align/1ahtL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.416889
/projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ka1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-21354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-w0.5.mod (nostruct-align/1ka1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ka1A/nostruct-align/1ka1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.026882
/projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t2k-w0.5.mod(21):  Reading nostruct-align/1rlw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-2092/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t2k-w0.5.mod (nostruct-align/1rlw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.904905
/projects/compbio/experiments/models.97/pdb/1c/1czj/nostruct-align/1czj.t2k-w0.5.mod(21):  Reading nostruct-align/1czj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-16362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1czj/nostruct-align/1czj.t2k-w0.5.mod (nostruct-align/1czj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1czj/nostruct-align/1czj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.371868
/projects/compbio/experiments/models.97/pdb/1f/1fkmA/nostruct-align/1fkmA.t2k-w0.5.mod(22):  Reading nostruct-align/1fkmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-4492/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkmA/nostruct-align/1fkmA.t2k-w0.5.mod (nostruct-align/1fkmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fkmA/nostruct-align/1fkmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.988884
/projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-w0.5.mod(22):  Reading nostruct-align/1dzkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-32734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-w0.5.mod (nostruct-align/1dzkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dzkA/nostruct-align/1dzkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.806866
/projects/compbio/experiments/models.97/pdb/1j/1jl5A/nostruct-align/1jl5A.t2k-w0.5.mod(21):  Reading nostruct-align/1jl5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14976/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jl5A/nostruct-align/1jl5A.t2k-w0.5.mod (nostruct-align/1jl5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jl5A/nostruct-align/1jl5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -47.368889
/projects/compbio/experiments/models.97/pdb/1h/1hyuA/nostruct-align/1hyuA.t2k-w0.5.mod(21):  Reading nostruct-align/1hyuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-26734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyuA/nostruct-align/1hyuA.t2k-w0.5.mod (nostruct-align/1hyuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyuA/nostruct-align/1hyuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.456854
/projects/compbio/experiments/models.97/pdb/1k/1k59A/nostruct-align/1k59A.t2k-w0.5.mod(22):  Reading nostruct-align/1k59A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k59A/nostruct-align/1k59A.t2k-w0.5.mod (nostruct-align/1k59A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k59A/nostruct-align/1k59A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.218872
/projects/compbio/experiments/models.97/pdb/1b/1bsmA/nostruct-align/1bsmA.t2k-w0.5.mod(21):  Reading nostruct-align/1bsmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-26363/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsmA/nostruct-align/1bsmA.t2k-w0.5.mod (nostruct-align/1bsmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bsmA/nostruct-align/1bsmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.844891
/projects/compbio/experiments/models.97/pdb/1h/1he7A/nostruct-align/1he7A.t2k-w0.5.mod(21):  Reading nostruct-align/1he7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-27746/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1he7A/nostruct-align/1he7A.t2k-w0.5.mod (nostruct-align/1he7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1he7A/nostruct-align/1he7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.708855
/projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-w0.5.mod(22):  Reading nostruct-align/1qtnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11934/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-w0.5.mod (nostruct-align/1qtnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qtnA/nostruct-align/1qtnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.587875
/projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-w0.5.mod(22):  Reading nostruct-align/1ft5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-7950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-w0.5.mod (nostruct-align/1ft5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ft5A/nostruct-align/1ft5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.227852
/projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k-w0.5.mod(22):  Reading nostruct-align/1qtnB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k-w0.5.mod (nostruct-align/1qtnB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qtnB/nostruct-align/1qtnB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.470894
/projects/compbio/experiments/models.97/pdb/1c/1cosA/nostruct-align/1cosA.t2k-w0.5.mod(21):  Reading nostruct-align/1cosA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-14651/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cosA/nostruct-align/1cosA.t2k-w0.5.mod (nostruct-align/1cosA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cosA/nostruct-align/1cosA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.519875
/projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t2k-w0.5.mod(22):  Reading nostruct-align/1rmd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-3027/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t2k-w0.5.mod (nostruct-align/1rmd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.338877
/projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t2k-w0.5.mod(21):  Reading nostruct-align/1rmg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-24392/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t2k-w0.5.mod (nostruct-align/1rmg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.152851
/projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t2k-w0.5.mod(21):  Reading nostruct-align/1rmi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-15973/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t2k-w0.5.mod (nostruct-align/1rmi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.746880
/projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-w0.5.mod(22):  Reading nostruct-align/1d8wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25691/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-w0.5.mod (nostruct-align/1d8wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d8wA/nostruct-align/1d8wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.693863
/projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t2k-w0.5.mod(21):  Reading nostruct-align/1hkbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16987/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t2k-w0.5.mod (nostruct-align/1hkbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.877909
/projects/compbio/experiments/models.97/pdb/1i/1i4fA/nostruct-align/1i4fA.t2k-w0.5.mod(22):  Reading nostruct-align/1i4fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-5910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4fA/nostruct-align/1i4fA.t2k-w0.5.mod (nostruct-align/1i4fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4fA/nostruct-align/1i4fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.282896
/projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t2k-w0.5.mod(22):  Reading nostruct-align/1kcw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-27786/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t2k-w0.5.mod (nostruct-align/1kcw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.464880
/projects/compbio/experiments/models.97/pdb/1i/1i4fB/nostruct-align/1i4fB.t2k-w0.5.mod(21):  Reading nostruct-align/1i4fB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-24978/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4fB/nostruct-align/1i4fB.t2k-w0.5.mod (nostruct-align/1i4fB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4fB/nostruct-align/1i4fB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.415857
/projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t2k-w0.5.mod(21):  Reading nostruct-align/1b37B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-6026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t2k-w0.5.mod (nostruct-align/1b37B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.395910
/projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t2k-w0.5.mod(21):  Reading nostruct-align/1dsbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-16378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t2k-w0.5.mod (nostruct-align/1dsbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.270859
/projects/compbio/experiments/models.97/pdb/1r/1rms/nostruct-align/1rms.t2k-w0.5.mod(21):  Reading nostruct-align/1rms.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-5874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rms/nostruct-align/1rms.t2k-w0.5.mod (nostruct-align/1rms.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rms/nostruct-align/1rms.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.820900
/projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t2k-w0.5.mod(21):  Reading nostruct-align/3cox.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-2524/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t2k-w0.5.mod (nostruct-align/3cox.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.367895
/projects/compbio/experiments/models.97/pdb/1q/1qmeA/nostruct-align/1qmeA.t2k-w0.5.mod(22):  Reading nostruct-align/1qmeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4030/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmeA/nostruct-align/1qmeA.t2k-w0.5.mod (nostruct-align/1qmeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmeA/nostruct-align/1qmeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.287886
/projects/compbio/experiments/models.97/pdb/1f/1fknA/nostruct-align/1fknA.t2k-w0.5.mod(21):  Reading nostruct-align/1fknA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21979/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fknA/nostruct-align/1fknA.t2k-w0.5.mod (nostruct-align/1fknA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fknA/nostruct-align/1fknA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.988899
/projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t2k-w0.5.mod(21):  Reading nostruct-align/1dzlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-32641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t2k-w0.5.mod (nostruct-align/1dzlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.834877
/projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-w0.5.mod(22):  Reading nostruct-align/1hyvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30166/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-w0.5.mod (nostruct-align/1hyvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyvA/nostruct-align/1hyvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.318899
/projects/compbio/experiments/models.97/pdb/1g/1g60A/nostruct-align/1g60A.t2k-w0.5.mod(22):  Reading nostruct-align/1g60A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-12295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g60A/nostruct-align/1g60A.t2k-w0.5.mod (nostruct-align/1g60A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g60A/nostruct-align/1g60A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.195864
/projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t2k-w0.5.mod(21):  Reading nostruct-align/1ggtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-7399/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t2k-w0.5.mod (nostruct-align/1ggtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.308893
/projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t2k-w0.5.mod(21):  Reading nostruct-align/1ofgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-18830/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t2k-w0.5.mod (nostruct-align/1ofgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.838881
/projects/compbio/experiments/models.97/pdb/1d/1d1nA/nostruct-align/1d1nA.t2k-w0.5.mod(21):  Reading nostruct-align/1d1nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-26595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1nA/nostruct-align/1d1nA.t2k-w0.5.mod (nostruct-align/1d1nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d1nA/nostruct-align/1d1nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.700867
/projects/compbio/experiments/models.97/pdb/1q/1qtoA/nostruct-align/1qtoA.t2k-w0.5.mod(22):  Reading nostruct-align/1qtoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14155/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtoA/nostruct-align/1qtoA.t2k-w0.5.mod (nostruct-align/1qtoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qtoA/nostruct-align/1qtoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.919870
/projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k-w0.5.mod(21):  Reading nostruct-align/1kdj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11763/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k-w0.5.mod (nostruct-align/1kdj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kdj/nostruct-align/1kdj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.965910
/projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t2k-w0.5.mod(21):  Reading nostruct-align/1lccA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12460/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t2k-w0.5.mod (nostruct-align/1lccA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.082851
/projects/compbio/experiments/models.97/pdb/1j/1jraA/nostruct-align/1jraA.t2k-w0.5.mod(22):  Reading nostruct-align/1jraA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-18139/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jraA/nostruct-align/1jraA.t2k-w0.5.mod (nostruct-align/1jraA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jraA/nostruct-align/1jraA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.018858
/projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t2k-w0.5.mod(21):  Reading nostruct-align/1rnd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-31599/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t2k-w0.5.mod (nostruct-align/1rnd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.096876
/projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t2k-w0.5.mod(22):  Reading nostruct-align/1dkzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-29484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t2k-w0.5.mod (nostruct-align/1dkzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.060867
/projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t2k-w0.5.mod(21):  Reading nostruct-align/1hkcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-10933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t2k-w0.5.mod (nostruct-align/1hkcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.583895
/projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t2k-w0.5.mod(21):  Reading nostruct-align/1fzaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12085/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t2k-w0.5.mod (nostruct-align/1fzaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.475883
/projects/compbio/experiments/models.97/pdb/1j/1j7vR/nostruct-align/1j7vR.t2k-w0.5.mod(22):  Reading nostruct-align/1j7vR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28768/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7vR/nostruct-align/1j7vR.t2k-w0.5.mod (nostruct-align/1j7vR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j7vR/nostruct-align/1j7vR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.101860
/projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-w0.5.mod(22):  Reading nostruct-align/1jykA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9299/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-w0.5.mod (nostruct-align/1jykA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jykA/nostruct-align/1jykA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.632864
/projects/compbio/experiments/models.97/pdb/1h/1h8aC/nostruct-align/1h8aC.t2k-w0.5.mod(22):  Reading nostruct-align/1h8aC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14117/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8aC/nostruct-align/1h8aC.t2k-w0.5.mod (nostruct-align/1h8aC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8aC/nostruct-align/1h8aC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.166862
/projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-w0.5.mod(21):  Reading nostruct-align/2tnfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-31595/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-w0.5.mod (nostruct-align/2tnfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.242895
/projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k-w0.5.mod(21):  Reading nostruct-align/2msbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k-w0.5.mod (nostruct-align/2msbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.887892
/projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t2k-w0.5.mod(21):  Reading nostruct-align/2msbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-5411/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t2k-w0.5.mod (nostruct-align/2msbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.939856
/projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-w0.5.mod(22):  Reading nostruct-align/1f8mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12569/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-w0.5.mod (nostruct-align/1f8mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f8mA/nostruct-align/1f8mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.154867
/projects/compbio/experiments/models.97/pdb/1j/1jjyA/nostruct-align/1jjyA.t2k-w0.5.mod(21):  Reading nostruct-align/1jjyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-2009/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jjyA/nostruct-align/1jjyA.t2k-w0.5.mod (nostruct-align/1jjyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jjyA/nostruct-align/1jjyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.622911
/projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t2k-w0.5.mod(21):  Reading nostruct-align/1chkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12095/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t2k-w0.5.mod (nostruct-align/1chkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.639906
/projects/compbio/experiments/models.97/pdb/1h/1hywA/nostruct-align/1hywA.t2k-w0.5.mod(21):  Reading nostruct-align/1hywA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-9639/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hywA/nostruct-align/1hywA.t2k-w0.5.mod (nostruct-align/1hywA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hywA/nostruct-align/1hywA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.013897
/projects/compbio/experiments/models.97/pdb/1j/1j95A/nostruct-align/1j95A.t2k-w0.5.mod(21):  Reading nostruct-align/1j95A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j95A/nostruct-align/1j95A.t2k-w0.5.mod (nostruct-align/1j95A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j95A/nostruct-align/1j95A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.432890
/projects/compbio/experiments/models.97/pdb/1e/1evsA/nostruct-align/1evsA.t2k-w0.5.mod(22):  Reading nostruct-align/1evsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-2097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evsA/nostruct-align/1evsA.t2k-w0.5.mod (nostruct-align/1evsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1evsA/nostruct-align/1evsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.349909
/projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ex1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14972/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t2k-w0.5.mod (nostruct-align/1ex1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.547857
/projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-w0.5.mod(22):  Reading nostruct-align/1g61A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-w0.5.mod (nostruct-align/1g61A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g61A/nostruct-align/1g61A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.631868
/projects/compbio/experiments/models.97/pdb/1l/1lcdA/nostruct-align/1lcdA.t2k-w0.5.mod(21):  Reading nostruct-align/1lcdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10147/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lcdA/nostruct-align/1lcdA.t2k-w0.5.mod (nostruct-align/1lcdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lcdA/nostruct-align/1lcdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.082851
/projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t2k-w0.5.mod(21):  Reading nostruct-align/1taxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-28897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t2k-w0.5.mod (nostruct-align/1taxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.210886
/projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t2k-w0.5.mod(22):  Reading nostruct-align/1cq3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-2501/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t2k-w0.5.mod (nostruct-align/1cq3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.061886
/projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t2k-w0.5.mod(22):  Reading nostruct-align/1dm9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4193/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t2k-w0.5.mod (nostruct-align/1dm9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.573895
/projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t2k-w0.5.mod(21):  Reading nostruct-align/1bzyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-31905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t2k-w0.5.mod (nostruct-align/1bzyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.051889
/projects/compbio/experiments/models.97/pdb/1h/1h8bA/nostruct-align/1h8bA.t2k-w0.5.mod(21):  Reading nostruct-align/1h8bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-16616/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8bA/nostruct-align/1h8bA.t2k-w0.5.mod (nostruct-align/1h8bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8bA/nostruct-align/1h8bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.307905
/projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-w0.5.mod(22):  Reading nostruct-align/1a73A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-6352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-w0.5.mod (nostruct-align/1a73A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.988855
/projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t2k-w0.5.mod(21):  Reading nostruct-align/1rom.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-9592/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t2k-w0.5.mod (nostruct-align/1rom.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.026863
/projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t2k-w0.5.mod(21):  Reading nostruct-align/1ron.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-17545/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t2k-w0.5.mod (nostruct-align/1ron.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.109894
/projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t2k-w0.5.mod(21):  Reading nostruct-align/1roo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t2k-w0.5.mod (nostruct-align/1roo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.399876
/projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k-w0.5.mod(21):  Reading nostruct-align/1hrnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-3488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k-w0.5.mod (nostruct-align/1hrnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hrnA/nostruct-align/1hrnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.230858
/projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t2k-w0.5.mod(22):  Reading nostruct-align/3ygsP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30967/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t2k-w0.5.mod (nostruct-align/3ygsP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.722855
/projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-w0.5.mod(22):  Reading nostruct-align/1qmgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32454/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-w0.5.mod (nostruct-align/1qmgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.138855
/projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t2k-w0.5.mod (nostruct-align/1b9dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.785860
/projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-w0.5.mod(22):  Reading nostruct-align/1j7xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-22097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-w0.5.mod (nostruct-align/1j7xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j7xA/nostruct-align/1j7xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.418861
/projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t2k-w0.5.mod(21):  Reading nostruct-align/3crxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3746/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t2k-w0.5.mod (nostruct-align/3crxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.972879
/projects/compbio/experiments/models.97/pdb/1e/1ex2A/nostruct-align/1ex2A.t2k-w0.5.mod(22):  Reading nostruct-align/1ex2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1934/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ex2A/nostruct-align/1ex2A.t2k-w0.5.mod (nostruct-align/1ex2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ex2A/nostruct-align/1ex2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.350878
/projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t2k-w0.5.mod(21):  Reading nostruct-align/1sesA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-31337/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t2k-w0.5.mod (nostruct-align/1sesA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.755892
/projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-w0.5.mod(22):  Reading nostruct-align/1mugA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-29215/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-w0.5.mod (nostruct-align/1mugA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.491886
/projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t2k-w0.5.mod(21):  Reading nostruct-align/1rpa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-10431/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t2k-w0.5.mod (nostruct-align/1rpa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.252874
/projects/compbio/experiments/models.97/pdb/1q/1qtqA/nostruct-align/1qtqA.t2k-w0.5.mod(21):  Reading nostruct-align/1qtqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29404/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtqA/nostruct-align/1qtqA.t2k-w0.5.mod (nostruct-align/1qtqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qtqA/nostruct-align/1qtqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.717880
/projects/compbio/experiments/models.97/pdb/1h/1hyxH/nostruct-align/1hyxH.t2k-w0.5.mod(21):  Reading nostruct-align/1hyxH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hyxH/nostruct-align/1hyxH.t2k-w0.5.mod (nostruct-align/1hyxH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hyxH/nostruct-align/1hyxH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.461882
/projects/compbio/experiments/models.97/pdb/1r/1rpb/nostruct-align/1rpb.t2k-w0.5.mod(21):  Reading nostruct-align/1rpb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-29718/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpb/nostruct-align/1rpb.t2k-w0.5.mod (nostruct-align/1rpb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rpb/nostruct-align/1rpb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.697872
/projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-w0.5.mod(22):  Reading nostruct-align/1eb6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16129/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-w0.5.mod (nostruct-align/1eb6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eb6A/nostruct-align/1eb6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.591900
/projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t2k-w0.5.mod(21):  Reading nostruct-align/3crd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-17229/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t2k-w0.5.mod (nostruct-align/3crd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.362860
/projects/compbio/experiments/models.97/pdb/1c/1cq4B/nostruct-align/1cq4B.t2k-w0.5.mod(22):  Reading nostruct-align/1cq4B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28884/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cq4B/nostruct-align/1cq4B.t2k-w0.5.mod (nostruct-align/1cq4B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cq4B/nostruct-align/1cq4B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.254887
/projects/compbio/experiments/models.97/pdb/1f/1ft8E/nostruct-align/1ft8E.t2k-w0.5.mod(21):  Reading nostruct-align/1ft8E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8504/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft8E/nostruct-align/1ft8E.t2k-w0.5.mod (nostruct-align/1ft8E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ft8E/nostruct-align/1ft8E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.497858
/projects/compbio/experiments/models.97/pdb/1a/1ahxA/nostruct-align/1ahxA.t2k-w0.5.mod(21):  Reading nostruct-align/1ahxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8182/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ahxA/nostruct-align/1ahxA.t2k-w0.5.mod (nostruct-align/1ahxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ahxA/nostruct-align/1ahxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.078899
/projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t2k-w0.5.mod(22):  Reading nostruct-align/1fzcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11614/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t2k-w0.5.mod (nostruct-align/1fzcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.040895
/projects/compbio/experiments/models.97/pdb/1h/1h8cA/nostruct-align/1h8cA.t2k-w0.5.mod(21):  Reading nostruct-align/1h8cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3326/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8cA/nostruct-align/1h8cA.t2k-w0.5.mod (nostruct-align/1h8cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8cA/nostruct-align/1h8cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.576862
/projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k-w0.5.mod(22):  Reading nostruct-align/1l7mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-31498/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k-w0.5.mod (nostruct-align/1l7mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l7mA/nostruct-align/1l7mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.535873
/projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t2k-w0.5.mod(21):  Reading nostruct-align/1rpl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-29634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t2k-w0.5.mod (nostruct-align/1rpl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.308872
/projects/compbio/experiments/models.97/pdb/1e/1ehaA/nostruct-align/1ehaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ehaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-23487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehaA/nostruct-align/1ehaA.t2k-w0.5.mod (nostruct-align/1ehaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ehaA/nostruct-align/1ehaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.770889
/projects/compbio/experiments/models.97/pdb/1k/1kusA/nostruct-align/1kusA.t2k-w0.5.mod(22):  Reading nostruct-align/1kusA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-20265/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kusA/nostruct-align/1kusA.t2k-w0.5.mod (nostruct-align/1kusA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kusA/nostruct-align/1kusA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.520859
/projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t2k-w0.5.mod(21):  Reading nostruct-align/1rpo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-31310/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t2k-w0.5.mod (nostruct-align/1rpo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.723896
/projects/compbio/experiments/models.97/pdb/1j/1jcqA/nostruct-align/1jcqA.t2k-w0.5.mod(22):  Reading nostruct-align/1jcqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4316/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcqA/nostruct-align/1jcqA.t2k-w0.5.mod (nostruct-align/1jcqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jcqA/nostruct-align/1jcqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.901878
/projects/compbio/experiments/models.97/pdb/1d/1dseA/nostruct-align/1dseA.t2k-w0.5.mod(22):  Reading nostruct-align/1dseA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-23574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dseA/nostruct-align/1dseA.t2k-w0.5.mod (nostruct-align/1dseA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dseA/nostruct-align/1dseA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.732906
/projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-w0.5.mod(22):  Reading nostruct-align/1f1eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11304/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-w0.5.mod (nostruct-align/1f1eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f1eA/nostruct-align/1f1eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.360888
/projects/compbio/experiments/models.97/pdb/2g/2gn5/nostruct-align/2gn5.t2k-w0.5.mod(21):  Reading nostruct-align/2gn5.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-24975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gn5/nostruct-align/2gn5.t2k-w0.5.mod (nostruct-align/2gn5.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gn5/nostruct-align/2gn5.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.309885
/projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t2k-w0.5.mod(21):  Reading nostruct-align/1u2fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6080/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t2k-w0.5.mod (nostruct-align/1u2fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.418900
/projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-w0.5.mod(22):  Reading nostruct-align/1eokA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11150/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-w0.5.mod (nostruct-align/1eokA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eokA/nostruct-align/1eokA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.700865
/projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t2k-w0.5.mod(21):  Reading nostruct-align/1tplA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-2412/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t2k-w0.5.mod (nostruct-align/1tplA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.838861
/projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t2k-w0.5.mod(22):  Reading nostruct-align/2scpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-6294/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t2k-w0.5.mod (nostruct-align/2scpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.036860
/projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t2k-w0.5.mod(22):  Reading nostruct-align/1qmhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13074/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t2k-w0.5.mod (nostruct-align/1qmhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.123911
/projects/compbio/experiments/models.97/pdb/1f/1fkqA/nostruct-align/1fkqA.t2k-w0.5.mod(21):  Reading nostruct-align/1fkqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-25233/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fkqA/nostruct-align/1fkqA.t2k-w0.5.mod (nostruct-align/1fkqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fkqA/nostruct-align/1fkqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.959852
/projects/compbio/experiments/models.97/pdb/1d/1dzoA/nostruct-align/1dzoA.t2k-w0.5.mod(22):  Reading nostruct-align/1dzoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13881/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzoA/nostruct-align/1dzoA.t2k-w0.5.mod (nostruct-align/1dzoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dzoA/nostruct-align/1dzoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.101910
/projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t2k-w0.5.mod(22):  Reading nostruct-align/1stfI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-18986/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t2k-w0.5.mod (nostruct-align/1stfI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.651882
/projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t2k-w0.5.mod(21):  Reading nostruct-align/1chmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-31229/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t2k-w0.5.mod (nostruct-align/1chmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.191910
/projects/compbio/experiments/models.97/pdb/1j/1j97A/nostruct-align/1j97A.t2k-w0.5.mod(22):  Reading nostruct-align/1j97A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15883/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j97A/nostruct-align/1j97A.t2k-w0.5.mod (nostruct-align/1j97A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j97A/nostruct-align/1j97A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.987885
/projects/compbio/experiments/models.97/pdb/1g/1ggwA/nostruct-align/1ggwA.t2k-w0.5.mod(21):  Reading nostruct-align/1ggwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-25363/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggwA/nostruct-align/1ggwA.t2k-w0.5.mod (nostruct-align/1ggwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ggwA/nostruct-align/1ggwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.434870
/projects/compbio/experiments/models.97/pdb/1l/1lybA/nostruct-align/1lybA.t2k-w0.5.mod(21):  Reading nostruct-align/1lybA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-31657/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lybA/nostruct-align/1lybA.t2k-w0.5.mod (nostruct-align/1lybA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lybA/nostruct-align/1lybA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.056894
/projects/compbio/experiments/models.97/pdb/1e/1evuA/nostruct-align/1evuA.t2k-w0.5.mod(22):  Reading nostruct-align/1evuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11559/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evuA/nostruct-align/1evuA.t2k-w0.5.mod (nostruct-align/1evuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1evuA/nostruct-align/1evuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.272860
/projects/compbio/experiments/models.97/pdb/1g/1g63A/nostruct-align/1g63A.t2k-w0.5.mod(21):  Reading nostruct-align/1g63A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12559/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g63A/nostruct-align/1g63A.t2k-w0.5.mod (nostruct-align/1g63A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g63A/nostruct-align/1g63A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.937862
/projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-w0.5.mod(22):  Reading nostruct-align/1d1qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30598/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-w0.5.mod (nostruct-align/1d1qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.995865
/projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t2k-w0.5.mod(21):  Reading nostruct-align/1qtrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-25993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t2k-w0.5.mod (nostruct-align/1qtrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.236895
/projects/compbio/experiments/models.97/pdb/1f/1ft9A/nostruct-align/1ft9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ft9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-5352/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ft9A/nostruct-align/1ft9A.t2k-w0.5.mod (nostruct-align/1ft9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ft9A/nostruct-align/1ft9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.367886
/projects/compbio/experiments/models.97/pdb/1e/1eb7A/nostruct-align/1eb7A.t2k-w0.5.mod(22):  Reading nostruct-align/1eb7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-21538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eb7A/nostruct-align/1eb7A.t2k-w0.5.mod (nostruct-align/1eb7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eb7A/nostruct-align/1eb7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.648861
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Reading nostruct-align/1rpxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.015905
/projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t2k-w0.5.mod(21):  Reading nostruct-align/1a75A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-2370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t2k-w0.5.mod (nostruct-align/1a75A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.245892
/projects/compbio/experiments/models.97/pdb/1g/1g4uS/nostruct-align/1g4uS.t2k-w0.5.mod(21):  Reading nostruct-align/1g4uS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-14779/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4uS/nostruct-align/1g4uS.t2k-w0.5.mod (nostruct-align/1g4uS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g4uS/nostruct-align/1g4uS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.749882
/projects/compbio/experiments/models.97/pdb/1j/1jcrA/nostruct-align/1jcrA.t2k-w0.5.mod(22):  Reading nostruct-align/1jcrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-23291/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcrA/nostruct-align/1jcrA.t2k-w0.5.mod (nostruct-align/1jcrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jcrA/nostruct-align/1jcrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.146866
/projects/compbio/experiments/models.97/pdb/1h/1h8dH/nostruct-align/1h8dH.t2k-w0.5.mod(21):  Reading nostruct-align/1h8dH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-8572/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8dH/nostruct-align/1h8dH.t2k-w0.5.mod (nostruct-align/1h8dH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8dH/nostruct-align/1h8dH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.064861
/projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-w0.5.mod(22):  Reading nostruct-align/1je0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-w0.5.mod (nostruct-align/1je0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1je0A/nostruct-align/1je0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.654869
/projects/compbio/experiments/models.97/pdb/1j/1jcrB/nostruct-align/1jcrB.t2k-w0.5.mod(22):  Reading nostruct-align/1jcrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcrB/nostruct-align/1jcrB.t2k-w0.5.mod (nostruct-align/1jcrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jcrB/nostruct-align/1jcrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.163910
/projects/compbio/experiments/models.97/pdb/1v/1vaoA/nostruct-align/1vaoA.t2k-w0.5.mod(21):  Reading nostruct-align/1vaoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vaoA/nostruct-align/1vaoA.t2k-w0.5.mod (nostruct-align/1vaoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vaoA/nostruct-align/1vaoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.146858
/projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t2k-w0.5.mod(21):  Reading nostruct-align/2pviA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-22924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t2k-w0.5.mod (nostruct-align/2pviA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.230892
/projects/compbio/experiments/models.97/pdb/1h/1h8dL/nostruct-align/1h8dL.t2k-w0.5.mod(22):  Reading nostruct-align/1h8dL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-5991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8dL/nostruct-align/1h8dL.t2k-w0.5.mod (nostruct-align/1h8dL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8dL/nostruct-align/1h8dL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.395851
/projects/compbio/experiments/models.97/pdb/1f/1f8pA/nostruct-align/1f8pA.t2k-w0.5.mod(21):  Reading nostruct-align/1f8pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-5484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8pA/nostruct-align/1f8pA.t2k-w0.5.mod (nostruct-align/1f8pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f8pA/nostruct-align/1f8pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.100872
/projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-w0.5.mod(22):  Reading nostruct-align/1fm0D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-8019/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-w0.5.mod (nostruct-align/1fm0D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fm0D/nostruct-align/1fm0D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.182905
/projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-w0.5.mod(22):  Reading nostruct-align/1j98A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3711/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-w0.5.mod (nostruct-align/1j98A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j98A/nostruct-align/1j98A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.391897
/projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-w0.5.mod(22):  Reading nostruct-align/1fm0E.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28455/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-w0.5.mod (nostruct-align/1fm0E.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fm0E/nostruct-align/1fm0E.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.371895
/projects/compbio/experiments/models.97/pdb/1g/1ggxA/nostruct-align/1ggxA.t2k-w0.5.mod(21):  Reading nostruct-align/1ggxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ggxA/nostruct-align/1ggxA.t2k-w0.5.mod (nostruct-align/1ggxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ggxA/nostruct-align/1ggxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.012873
/projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t2k-w0.5.mod(21):  Reading nostruct-align/1d1rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-7362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t2k-w0.5.mod (nostruct-align/1d1rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.113871
/projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t2k-w0.5.mod(22):  Reading nostruct-align/1qtsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14349/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t2k-w0.5.mod (nostruct-align/1qtsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.773855
/projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t2k-w0.5.mod(21):  Reading nostruct-align/1aapA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-12404/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t2k-w0.5.mod (nostruct-align/1aapA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.362864
/projects/compbio/experiments/models.97/pdb/1c/1c5lH/nostruct-align/1c5lH.t2k-w0.5.mod(21):  Reading nostruct-align/1c5lH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23707/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5lH/nostruct-align/1c5lH.t2k-w0.5.mod (nostruct-align/1c5lH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c5lH/nostruct-align/1c5lH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.055882
/projects/compbio/experiments/models.97/pdb/1c/1c5lL/nostruct-align/1c5lL.t2k-w0.5.mod(21):  Reading nostruct-align/1c5lL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12068/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5lL/nostruct-align/1c5lL.t2k-w0.5.mod (nostruct-align/1c5lL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c5lL/nostruct-align/1c5lL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.862856
/projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t2k-w0.5.mod(21):  Reading nostruct-align/1aj8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-32456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t2k-w0.5.mod (nostruct-align/1aj8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.122910
/projects/compbio/experiments/models.97/pdb/1h/1h8eA/nostruct-align/1h8eA.t2k-w0.5.mod(22):  Reading nostruct-align/1h8eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eA/nostruct-align/1h8eA.t2k-w0.5.mod (nostruct-align/1h8eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8eA/nostruct-align/1h8eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.506868
/projects/compbio/experiments/models.97/pdb/1j/1jyoA/nostruct-align/1jyoA.t2k-w0.5.mod(22):  Reading nostruct-align/1jyoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyoA/nostruct-align/1jyoA.t2k-w0.5.mod (nostruct-align/1jyoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jyoA/nostruct-align/1jyoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.876852
/projects/compbio/experiments/models.97/pdb/1h/1h8eD/nostruct-align/1h8eD.t2k-w0.5.mod(22):  Reading nostruct-align/1h8eD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22814/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eD/nostruct-align/1h8eD.t2k-w0.5.mod (nostruct-align/1h8eD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8eD/nostruct-align/1h8eD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.312910
/projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t2k-w0.5.mod(21):  Reading nostruct-align/1rro.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-3404/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t2k-w0.5.mod (nostruct-align/1rro.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.504875
/projects/compbio/experiments/models.97/pdb/1h/1h8eG/nostruct-align/1h8eG.t2k-w0.5.mod(22):  Reading nostruct-align/1h8eG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23880/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eG/nostruct-align/1h8eG.t2k-w0.5.mod (nostruct-align/1h8eG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8eG/nostruct-align/1h8eG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.974888
/projects/compbio/experiments/models.97/pdb/1j/1jyoE/nostruct-align/1jyoE.t2k-w0.5.mod(22):  Reading nostruct-align/1jyoE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8397/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyoE/nostruct-align/1jyoE.t2k-w0.5.mod (nostruct-align/1jyoE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jyoE/nostruct-align/1jyoE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.502882
/projects/compbio/experiments/models.97/pdb/1h/1h8eH/nostruct-align/1h8eH.t2k-w0.5.mod(22):  Reading nostruct-align/1h8eH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-8614/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eH/nostruct-align/1h8eH.t2k-w0.5.mod (nostruct-align/1h8eH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8eH/nostruct-align/1h8eH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.727865
/projects/compbio/experiments/models.97/pdb/1h/1h8eI/nostruct-align/1h8eI.t2k-w0.5.mod(22):  Reading nostruct-align/1h8eI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-18839/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8eI/nostruct-align/1h8eI.t2k-w0.5.mod (nostruct-align/1h8eI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8eI/nostruct-align/1h8eI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.600851
/projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t2k-w0.5.mod(21):  Reading nostruct-align/1vapA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-30236/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t2k-w0.5.mod (nostruct-align/1vapA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.042875
/projects/compbio/experiments/models.97/pdb/1b/1b9gA/nostruct-align/1b9gA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-31443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9gA/nostruct-align/1b9gA.t2k-w0.5.mod (nostruct-align/1b9gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9gA/nostruct-align/1b9gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.866856
/projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-w0.5.mod(22):  Reading nostruct-align/1kid.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-31038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-w0.5.mod (nostruct-align/1kid.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.066872
/projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t2k-w0.5.mod(21):  Reading nostruct-align/4gcr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-478/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t2k-w0.5.mod (nostruct-align/4gcr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.039862
/projects/compbio/experiments/models.97/pdb/1g/1g65K/nostruct-align/1g65K.t2k-w0.5.mod(21):  Reading nostruct-align/1g65K.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-8434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g65K/nostruct-align/1g65K.t2k-w0.5.mod (nostruct-align/1g65K.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g65K/nostruct-align/1g65K.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.851870
/projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t2k-w0.5.mod(21):  Reading nostruct-align/1ljrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-27571/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t2k-w0.5.mod (nostruct-align/1ljrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.820904
/projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t2k-w0.5.mod(22):  Reading nostruct-align/1kit.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-28549/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t2k-w0.5.mod (nostruct-align/1kit.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.128901
/projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t2k-w0.5.mod(22):  Reading nostruct-align/1ignA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t2k-w0.5.mod (nostruct-align/1ignA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.284864
/projects/compbio/experiments/models.97/pdb/1g/1g4wR/nostruct-align/1g4wR.t2k-w0.5.mod(21):  Reading nostruct-align/1g4wR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-19985/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4wR/nostruct-align/1g4wR.t2k-w0.5.mod (nostruct-align/1g4wR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g4wR/nostruct-align/1g4wR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.536896
/projects/compbio/experiments/models.97/pdb/1i/1i4lA/nostruct-align/1i4lA.t2k-w0.5.mod(21):  Reading nostruct-align/1i4lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-9500/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4lA/nostruct-align/1i4lA.t2k-w0.5.mod (nostruct-align/1i4lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4lA/nostruct-align/1i4lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.598858
/projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t2k-w0.5.mod(22):  Reading nostruct-align/1rss.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-30546/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t2k-w0.5.mod (nostruct-align/1rss.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.996880
/projects/compbio/experiments/models.97/pdb/1k/1ka8A/nostruct-align/1ka8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ka8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-2724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ka8A/nostruct-align/1ka8A.t2k-w0.5.mod (nostruct-align/1ka8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ka8A/nostruct-align/1ka8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.734865
/projects/compbio/experiments/models.97/pdb/1e/1eonA/nostruct-align/1eonA.t2k-w0.5.mod(22):  Reading nostruct-align/1eonA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19799/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eonA/nostruct-align/1eonA.t2k-w0.5.mod (nostruct-align/1eonA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eonA/nostruct-align/1eonA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.089853
/projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t2k-w0.5.mod(22):  Reading nostruct-align/1b9hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6227/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t2k-w0.5.mod (nostruct-align/1b9hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.915854
/projects/compbio/experiments/models.97/pdb/1f/1fm2A/nostruct-align/1fm2A.t2k-w0.5.mod(22):  Reading nostruct-align/1fm2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19054/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm2A/nostruct-align/1fm2A.t2k-w0.5.mod (nostruct-align/1fm2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fm2A/nostruct-align/1fm2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.867907
/projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t2k-w0.5.mod(22):  Reading nostruct-align/1rsy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13290/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t2k-w0.5.mod (nostruct-align/1rsy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.693897
/projects/compbio/experiments/models.97/pdb/1f/1fm2B/nostruct-align/1fm2B.t2k-w0.5.mod(22):  Reading nostruct-align/1fm2B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-30415/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm2B/nostruct-align/1fm2B.t2k-w0.5.mod (nostruct-align/1fm2B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fm2B/nostruct-align/1fm2B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.558910
/projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t2k-w0.5.mod(21):  Reading nostruct-align/1dzrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-27534/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t2k-w0.5.mod (nostruct-align/1dzrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.270882
/projects/compbio/experiments/models.97/pdb/1f/1f8rA/nostruct-align/1f8rA.t2k-w0.5.mod(21):  Reading nostruct-align/1f8rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-14257/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8rA/nostruct-align/1f8rA.t2k-w0.5.mod (nostruct-align/1f8rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f8rA/nostruct-align/1f8rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.613857
/projects/compbio/experiments/models.97/pdb/1e/1evxA/nostruct-align/1evxA.t2k-w0.5.mod(21):  Reading nostruct-align/1evxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-3177/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evxA/nostruct-align/1evxA.t2k-w0.5.mod (nostruct-align/1evxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1evxA/nostruct-align/1evxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.835890
/projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-w0.5.mod(22):  Reading nostruct-align/1g66A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8103/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-w0.5.mod (nostruct-align/1g66A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g66A/nostruct-align/1g66A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.355852
/projects/compbio/experiments/models.97/pdb/1d/1ddvA/nostruct-align/1ddvA.t2k-w0.5.mod(22):  Reading nostruct-align/1ddvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddvA/nostruct-align/1ddvA.t2k-w0.5.mod (nostruct-align/1ddvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddvA/nostruct-align/1ddvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.572855
/projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-w0.5.mod(22):  Reading nostruct-align/1df4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-25957/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-w0.5.mod (nostruct-align/1df4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.052858
/projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t2k-w0.5.mod(21):  Reading nostruct-align/1bu2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26634/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t2k-w0.5.mod (nostruct-align/1bu2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.685896
/projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t2k-w0.5.mod(21):  Reading nostruct-align/1cozA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-8825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t2k-w0.5.mod (nostruct-align/1cozA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.028875
/projects/compbio/experiments/models.97/pdb/1h/1h8gA/nostruct-align/1h8gA.t2k-w0.5.mod(22):  Reading nostruct-align/1h8gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26313/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8gA/nostruct-align/1h8gA.t2k-w0.5.mod (nostruct-align/1h8gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8gA/nostruct-align/1h8gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.384863
/projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t2k-w0.5.mod(21):  Reading nostruct-align/1kjs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7185/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t2k-w0.5.mod (nostruct-align/1kjs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.402880
/projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t2k-w0.5.mod(21):  Reading nostruct-align/1a78A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-13298/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t2k-w0.5.mod (nostruct-align/1a78A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.589903
/projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t2k-w0.5.mod(21):  Reading nostruct-align/2gpr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-4303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t2k-w0.5.mod (nostruct-align/2gpr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.846909
/projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t2k-w0.5.mod(21):  Reading nostruct-align/1fzgD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t2k-w0.5.mod (nostruct-align/1fzgD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.623869
/projects/compbio/experiments/models.97/pdb/1i/1i4mA/nostruct-align/1i4mA.t2k-w0.5.mod(22):  Reading nostruct-align/1i4mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21894/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4mA/nostruct-align/1i4mA.t2k-w0.5.mod (nostruct-align/1i4mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4mA/nostruct-align/1i4mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.548904
/projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t2k-w0.5.mod(21):  Reading nostruct-align/1dad.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-29335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t2k-w0.5.mod (nostruct-align/1dad.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.316887
/projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t2k-w0.5.mod(21):  Reading nostruct-align/1pd21.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12204/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t2k-w0.5.mod (nostruct-align/1pd21.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.562889
/projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k-w0.5.mod(22):  Reading nostruct-align/1rtu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-25123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k-w0.5.mod (nostruct-align/1rtu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.946884
/projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-w0.5.mod(22):  Reading nostruct-align/1kgdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-13968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-w0.5.mod (nostruct-align/1kgdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kgdA/nostruct-align/1kgdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.779869
/projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-w0.5.mod(22):  Reading nostruct-align/1evyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17471/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-w0.5.mod (nostruct-align/1evyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1evyA/nostruct-align/1evyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.555893
/projects/compbio/experiments/models.97/pdb/1e/1ex7A/nostruct-align/1ex7A.t2k-w0.5.mod(22):  Reading nostruct-align/1ex7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32438/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ex7A/nostruct-align/1ex7A.t2k-w0.5.mod (nostruct-align/1ex7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ex7A/nostruct-align/1ex7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.377882
/projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-w0.5.mod(22):  Reading nostruct-align/1ddwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8826/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-w0.5.mod (nostruct-align/1ddwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddwA/nostruct-align/1ddwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.034883
/projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-w0.5.mod(22):  Reading nostruct-align/1g4yB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-w0.5.mod (nostruct-align/1g4yB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g4yB/nostruct-align/1g4yB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.563904
/projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t2k-w0.5.mod(21):  Reading nostruct-align/1dar.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-17751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t2k-w0.5.mod (nostruct-align/1dar.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.318880
/projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t2k-w0.5.mod(21):  Reading nostruct-align/1dat.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-1636/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t2k-w0.5.mod (nostruct-align/1dat.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.017904
/projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t2k-w0.5.mod(21):  Reading nostruct-align/1jrhI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-19754/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t2k-w0.5.mod (nostruct-align/1jrhI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.936909
/projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k-w0.5.mod(22):  Reading nostruct-align/1jyrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21788/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k-w0.5.mod (nostruct-align/1jyrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jyrA/nostruct-align/1jyrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.413868
/projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t2k-w0.5.mod(22):  Reading nostruct-align/1a79A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-12335/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t2k-w0.5.mod (nostruct-align/1a79A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.610903
/projects/compbio/experiments/models.97/pdb/1e/1e5dA/nostruct-align/1e5dA.t2k-w0.5.mod(22):  Reading nostruct-align/1e5dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-26504/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5dA/nostruct-align/1e5dA.t2k-w0.5.mod (nostruct-align/1e5dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5dA/nostruct-align/1e5dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.779860
/projects/compbio/experiments/models.97/pdb/1g/1g4yR/nostruct-align/1g4yR.t2k-w0.5.mod(22):  Reading nostruct-align/1g4yR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-26696/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g4yR/nostruct-align/1g4yR.t2k-w0.5.mod (nostruct-align/1g4yR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g4yR/nostruct-align/1g4yR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.040901
/projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-w0.5.mod(22):  Reading nostruct-align/1bebA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28486/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-w0.5.mod (nostruct-align/1bebA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.501867
/projects/compbio/experiments/models.97/pdb/1q/1qfcA/nostruct-align/1qfcA.t2k-w0.5.mod(21):  Reading nostruct-align/1qfcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfcA/nostruct-align/1qfcA.t2k-w0.5.mod (nostruct-align/1qfcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfcA/nostruct-align/1qfcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.640862
/projects/compbio/experiments/models.97/pdb/1v/1vasA/nostruct-align/1vasA.t2k-w0.5.mod(21):  Reading nostruct-align/1vasA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-15434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vasA/nostruct-align/1vasA.t2k-w0.5.mod (nostruct-align/1vasA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vasA/nostruct-align/1vasA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.801878
/projects/compbio/experiments/models.97/pdb/1f/1fdlH/nostruct-align/1fdlH.t2k-w0.5.mod(21):  Reading nostruct-align/1fdlH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-8083/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdlH/nostruct-align/1fdlH.t2k-w0.5.mod (nostruct-align/1fdlH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdlH/nostruct-align/1fdlH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.605900
/projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t2k-w0.5.mod(22):  Reading nostruct-align/2scuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9421/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t2k-w0.5.mod (nostruct-align/2scuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.205891
/projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t2k-w0.5.mod(21):  Reading nostruct-align/2scuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-2052/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t2k-w0.5.mod (nostruct-align/2scuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.105852
/projects/compbio/experiments/models.97/pdb/2h/2hppP/nostruct-align/2hppP.t2k-w0.5.mod(21):  Reading nostruct-align/2hppP.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-12090/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hppP/nostruct-align/2hppP.t2k-w0.5.mod (nostruct-align/2hppP.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hppP/nostruct-align/2hppP.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.718863
/projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t2k-w0.5.mod(21):  Reading nostruct-align/1chrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-12331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t2k-w0.5.mod (nostruct-align/1chrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.978893
/projects/compbio/experiments/models.97/pdb/1d/1d1vA/nostruct-align/1d1vA.t2k-w0.5.mod(21):  Reading nostruct-align/1d1vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-23270/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d1vA/nostruct-align/1d1vA.t2k-w0.5.mod (nostruct-align/1d1vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d1vA/nostruct-align/1d1vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.972860
/projects/compbio/experiments/models.97/pdb/1b/1bsvA/nostruct-align/1bsvA.t2k-w0.5.mod(21):  Reading nostruct-align/1bsvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bsvA/nostruct-align/1bsvA.t2k-w0.5.mod (nostruct-align/1bsvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bsvA/nostruct-align/1bsvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.083895
/projects/compbio/experiments/models.97/pdb/1k/1k4cC/nostruct-align/1k4cC.t2k-w0.5.mod(22):  Reading nostruct-align/1k4cC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-16674/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4cC/nostruct-align/1k4cC.t2k-w0.5.mod (nostruct-align/1k4cC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k4cC/nostruct-align/1k4cC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.101873
/projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-w0.5.mod(22):  Reading nostruct-align/1qtwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-5042/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-w0.5.mod (nostruct-align/1qtwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.183872
/projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t2k-w0.5.mod(21):  Reading nostruct-align/1dbs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-9825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t2k-w0.5.mod (nostruct-align/1dbs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.297882
/projects/compbio/experiments/models.97/pdb/1l/1lckA/nostruct-align/1lckA.t2k-w0.5.mod(21):  Reading nostruct-align/1lckA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-29297/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lckA/nostruct-align/1lckA.t2k-w0.5.mod (nostruct-align/1lckA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lckA/nostruct-align/1lckA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.858860
/projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-w0.5.mod(22):  Reading nostruct-align/2cuaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-28279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-w0.5.mod (nostruct-align/2cuaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.132868
/projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t2k-w0.5.mod(21):  Reading nostruct-align/1vpfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-8693/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t2k-w0.5.mod (nostruct-align/1vpfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.726896
/projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t2k-w0.5.mod(22):  Reading nostruct-align/1klo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-30781/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t2k-w0.5.mod (nostruct-align/1klo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.138887
/projects/compbio/experiments/models.97/pdb/1k/1klt/nostruct-align/1klt.t2k-w0.5.mod(21):  Reading nostruct-align/1klt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-30587/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1klt/nostruct-align/1klt.t2k-w0.5.mod (nostruct-align/1klt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1klt/nostruct-align/1klt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.778906
/projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-w0.5.mod(22):  Reading nostruct-align/1igqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-w0.5.mod (nostruct-align/1igqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igqA/nostruct-align/1igqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.062885
/projects/compbio/experiments/models.97/pdb/1e/1e5eA/nostruct-align/1e5eA.t2k-w0.5.mod(22):  Reading nostruct-align/1e5eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-21592/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5eA/nostruct-align/1e5eA.t2k-w0.5.mod (nostruct-align/1e5eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5eA/nostruct-align/1e5eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.194895
/projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t2k-w0.5.mod(21):  Reading nostruct-align/1qfdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-5786/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t2k-w0.5.mod (nostruct-align/1qfdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.199850
/projects/compbio/experiments/models.97/pdb/1j/1je5A/nostruct-align/1je5A.t2k-w0.5.mod(22):  Reading nostruct-align/1je5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3253/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1je5A/nostruct-align/1je5A.t2k-w0.5.mod (nostruct-align/1je5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1je5A/nostruct-align/1je5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.777908
/projects/compbio/experiments/models.97/pdb/1h/1hruA/nostruct-align/1hruA.t2k-w0.5.mod(22):  Reading nostruct-align/1hruA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hruA/nostruct-align/1hruA.t2k-w0.5.mod (nostruct-align/1hruA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hruA/nostruct-align/1hruA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.607899
/projects/compbio/experiments/models.97/pdb/1i/1ip9A/nostruct-align/1ip9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ip9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-8681/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ip9A/nostruct-align/1ip9A.t2k-w0.5.mod (nostruct-align/1ip9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ip9A/nostruct-align/1ip9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.567905
/projects/compbio/experiments/models.97/pdb/1b/1b9kA/nostruct-align/1b9kA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-24975/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9kA/nostruct-align/1b9kA.t2k-w0.5.mod (nostruct-align/1b9kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9kA/nostruct-align/1b9kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.685890
/projects/compbio/experiments/models.97/pdb/1f/1fm5A/nostruct-align/1fm5A.t2k-w0.5.mod(21):  Reading nostruct-align/1fm5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-7819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm5A/nostruct-align/1fm5A.t2k-w0.5.mod (nostruct-align/1fm5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fm5A/nostruct-align/1fm5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.078863
/projects/compbio/experiments/models.97/pdb/1a/1awqA/nostruct-align/1awqA.t2k-w0.5.mod(21):  Reading nostruct-align/1awqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-13189/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awqA/nostruct-align/1awqA.t2k-w0.5.mod (nostruct-align/1awqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awqA/nostruct-align/1awqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.744850
/projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t2k-w0.5.mod(22):  Reading nostruct-align/2i1b.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3716/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t2k-w0.5.mod (nostruct-align/2i1b.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.636868
/projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k-w0.5.mod(21):  Reading nostruct-align/1df7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-32218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k-w0.5.mod (nostruct-align/1df7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.384890
/projects/compbio/experiments/models.97/pdb/3u/3uagA/nostruct-align/3uagA.t2k-w0.5.mod(22):  Reading nostruct-align/3uagA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21611/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3u/3uagA/nostruct-align/3uagA.t2k-w0.5.mod (nostruct-align/3uagA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3u/3uagA/nostruct-align/3uagA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.564854
/projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t2k-w0.5.mod(21):  Reading nostruct-align/1bu5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-31810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t2k-w0.5.mod (nostruct-align/1bu5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.894907
/projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-w0.5.mod(22):  Reading nostruct-align/1dcs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-20517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-w0.5.mod (nostruct-align/1dcs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.913870
/projects/compbio/experiments/models.97/pdb/3e/3ertA/nostruct-align/3ertA.t2k-w0.5.mod(21):  Reading nostruct-align/3ertA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-22480/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3ertA/nostruct-align/3ertA.t2k-w0.5.mod (nostruct-align/3ertA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3ertA/nostruct-align/3ertA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.039902
/projects/compbio/experiments/models.97/pdb/2g/2gsq/nostruct-align/2gsq.t2k-w0.5.mod(21):  Reading nostruct-align/2gsq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gsq/nostruct-align/2gsq.t2k-w0.5.mod (nostruct-align/2gsq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gsq/nostruct-align/2gsq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.350863
/projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t2k-w0.5.mod(22):  Reading nostruct-align/1igrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t2k-w0.5.mod (nostruct-align/1igrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.637880
/projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t2k-w0.5.mod(22):  Reading nostruct-align/1tiiC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t2k-w0.5.mod (nostruct-align/1tiiC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.150875
/projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t2k-w0.5.mod(22):  Reading nostruct-align/1tiiD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9274/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t2k-w0.5.mod (nostruct-align/1tiiD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.371872
/projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t2k-w0.5.mod(22):  Reading nostruct-align/1qfeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t2k-w0.5.mod (nostruct-align/1qfeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.067873
/projects/compbio/experiments/models.97/pdb/1j/1jcxA/nostruct-align/1jcxA.t2k-w0.5.mod(22):  Reading nostruct-align/1jcxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17609/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jcxA/nostruct-align/1jcxA.t2k-w0.5.mod (nostruct-align/1jcxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jcxA/nostruct-align/1jcxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.955891
/projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t2k-w0.5.mod(22):  Reading nostruct-align/3cyr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21683/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t2k-w0.5.mod (nostruct-align/3cyr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.570902
/projects/compbio/experiments/models.97/pdb/2f/2fbjL/nostruct-align/2fbjL.t2k-w0.5.mod(21):  Reading nostruct-align/2fbjL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-14379/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fbjL/nostruct-align/2fbjL.t2k-w0.5.mod (nostruct-align/2fbjL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fbjL/nostruct-align/2fbjL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.718861
/projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t2k-w0.5.mod(22):  Reading nostruct-align/1stmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-13275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t2k-w0.5.mod (nostruct-align/1stmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.461859
/projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t2k-w0.5.mod(21):  Reading nostruct-align/1ddf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9907/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t2k-w0.5.mod (nostruct-align/1ddf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.901869
/projects/compbio/experiments/models.97/pdb/1t/1tr1A/nostruct-align/1tr1A.t2k-w0.5.mod(21):  Reading nostruct-align/1tr1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-18853/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tr1A/nostruct-align/1tr1A.t2k-w0.5.mod (nostruct-align/1tr1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tr1A/nostruct-align/1tr1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.741852
/projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-6999/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t2k-w0.5.mod (nostruct-align/1b9lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.600872
/projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t2k-w0.5.mod(21):  Reading nostruct-align/1knb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12938/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t2k-w0.5.mod (nostruct-align/1knb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.837902
/projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t2k-w0.5.mod(21):  Reading nostruct-align/1ddzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-31800/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t2k-w0.5.mod (nostruct-align/1ddzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.682880
/projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t2k-w0.5.mod(21):  Reading nostruct-align/1hdcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-11737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t2k-w0.5.mod (nostruct-align/1hdcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.994902
/projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t2k-w0.5.mod(21):  Reading nostruct-align/1ddt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-19091/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t2k-w0.5.mod (nostruct-align/1ddt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.003864
/projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t2k-w0.5.mod(21):  Reading nostruct-align/1pbwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19150/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t2k-w0.5.mod (nostruct-align/1pbwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.334883
/projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t2k-w0.5.mod(22):  Reading nostruct-align/1a02F.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-21894/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t2k-w0.5.mod (nostruct-align/1a02F.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.956894
/projects/compbio/experiments/models.97/pdb/1f/1fzkA/nostruct-align/1fzkA.t2k-w0.5.mod(22):  Reading nostruct-align/1fzkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9319/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzkA/nostruct-align/1fzkA.t2k-w0.5.mod (nostruct-align/1fzkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzkA/nostruct-align/1fzkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.453909
/projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t2k-w0.5.mod(21):  Reading nostruct-align/1a02J.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-18124/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t2k-w0.5.mod (nostruct-align/1a02J.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.554873
/projects/compbio/experiments/models.97/pdb/1f/1fzkB/nostruct-align/1fzkB.t2k-w0.5.mod(22):  Reading nostruct-align/1fzkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26959/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzkB/nostruct-align/1fzkB.t2k-w0.5.mod (nostruct-align/1fzkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzkB/nostruct-align/1fzkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.456854
/projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t2k-w0.5.mod(21):  Reading nostruct-align/1knt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14253/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t2k-w0.5.mod (nostruct-align/1knt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.403887
/projects/compbio/experiments/models.97/pdb/1e/1ehiA/nostruct-align/1ehiA.t2k-w0.5.mod(22):  Reading nostruct-align/1ehiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-4647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehiA/nostruct-align/1ehiA.t2k-w0.5.mod (nostruct-align/1ehiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ehiA/nostruct-align/1ehiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.871878
/projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t2k-w0.5.mod(21):  Reading nostruct-align/1zac.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-30046/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t2k-w0.5.mod (nostruct-align/1zac.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.254866
/projects/compbio/experiments/models.97/pdb/1e/1e5gA/nostruct-align/1e5gA.t2k-w0.5.mod(21):  Reading nostruct-align/1e5gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-21917/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5gA/nostruct-align/1e5gA.t2k-w0.5.mod (nostruct-align/1e5gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5gA/nostruct-align/1e5gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.166878
/projects/compbio/experiments/models.97/pdb/1b/1bu6O/nostruct-align/1bu6O.t2k-w0.5.mod(22):  Reading nostruct-align/1bu6O.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7174/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu6O/nostruct-align/1bu6O.t2k-w0.5.mod (nostruct-align/1bu6O.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bu6O/nostruct-align/1bu6O.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.803850
/projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t2k-w0.5.mod(22):  Reading nostruct-align/1a02N.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23153/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t2k-w0.5.mod (nostruct-align/1a02N.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.822899
/projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-w0.5.mod(22):  Reading nostruct-align/1f1mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-5056/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-w0.5.mod (nostruct-align/1f1mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f1mA/nostruct-align/1f1mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.779882
/projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t2k-w0.5.mod(21):  Reading nostruct-align/1dec.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-15837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t2k-w0.5.mod (nostruct-align/1dec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.535875
/projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t2k-w0.5.mod(21):  Reading nostruct-align/2vgh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t2k-w0.5.mod (nostruct-align/2vgh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.910896
/projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t2k-w0.5.mod(21):  Reading nostruct-align/1def.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-25375/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t2k-w0.5.mod (nostruct-align/1def.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.469860
/projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-w0.5.mod(22):  Reading nostruct-align/1b9mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11353/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-w0.5.mod (nostruct-align/1b9mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.868893
/projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t2k-w0.5.mod(22):  Reading nostruct-align/1qmpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-10839/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t2k-w0.5.mod (nostruct-align/1qmpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.368879
/projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t2k-w0.5.mod(21):  Reading nostruct-align/1zaq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25418/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t2k-w0.5.mod (nostruct-align/1zaq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.584862
/projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t2k-w0.5.mod(21):  Reading nostruct-align/1chuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-32585/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t2k-w0.5.mod (nostruct-align/1chuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.598907
/projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t2k-w0.5.mod(22):  Reading nostruct-align/1awsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-14867/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t2k-w0.5.mod (nostruct-align/1awsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.435850
/projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-w0.5.mod(22):  Reading nostruct-align/1koe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14605/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-w0.5.mod (nostruct-align/1koe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.971897
/projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t2k-w0.5.mod(21):  Reading nostruct-align/1pxtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-3221/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t2k-w0.5.mod (nostruct-align/1pxtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.946888
/projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t2k-w0.5.mod(21):  Reading nostruct-align/1bu7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-30510/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t2k-w0.5.mod (nostruct-align/1bu7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.746883
/projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t2k-w0.5.mod(21):  Reading nostruct-align/4gatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-25661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t2k-w0.5.mod (nostruct-align/4gatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.178909
/projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t2k-w0.5.mod(21):  Reading nostruct-align/1ryc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-31459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t2k-w0.5.mod (nostruct-align/1ryc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.268908
/projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t2k-w0.5.mod(21):  Reading nostruct-align/1tbaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-15938/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t2k-w0.5.mod (nostruct-align/1tbaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.804890
/projects/compbio/experiments/models.97/pdb/4t/4ts1A/nostruct-align/4ts1A.t2k-w0.5.mod(21):  Reading nostruct-align/4ts1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-16911/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4t/4ts1A/nostruct-align/4ts1A.t2k-w0.5.mod (nostruct-align/4ts1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4t/4ts1A/nostruct-align/4ts1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.676867
/projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t2k-w0.5.mod(21):  Reading nostruct-align/2rveA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-20815/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t2k-w0.5.mod (nostruct-align/2rveA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.028898
/projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t2k-w0.5.mod(21):  Reading nostruct-align/1smeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-11526/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t2k-w0.5.mod (nostruct-align/1smeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.502888
/projects/compbio/experiments/models.97/pdb/1i/1ii2A/nostruct-align/1ii2A.t2k-w0.5.mod(22):  Reading nostruct-align/1ii2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2616/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii2A/nostruct-align/1ii2A.t2k-w0.5.mod (nostruct-align/1ii2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ii2A/nostruct-align/1ii2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.799856
/projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t2k-w0.5.mod(22):  Reading nostruct-align/1befA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18557/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t2k-w0.5.mod (nostruct-align/1befA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.585884
/projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t2k-w0.5.mod(21):  Reading nostruct-align/1igtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-6371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t2k-w0.5.mod (nostruct-align/1igtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.884893
/projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-w0.5.mod(22):  Reading nostruct-align/1i60A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5294/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-w0.5.mod (nostruct-align/1i60A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i60A/nostruct-align/1i60A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.527851
/projects/compbio/experiments/models.97/pdb/1i/1igtD/nostruct-align/1igtD.t2k-w0.5.mod(22):  Reading nostruct-align/1igtD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11644/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igtD/nostruct-align/1igtD.t2k-w0.5.mod (nostruct-align/1igtD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igtD/nostruct-align/1igtD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.537905
/projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t2k-w0.5.mod(21):  Reading nostruct-align/2fivA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-2325/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t2k-w0.5.mod (nostruct-align/2fivA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.150890
/projects/compbio/experiments/models.97/pdb/1q/1qfgA/nostruct-align/1qfgA.t2k-w0.5.mod(21):  Reading nostruct-align/1qfgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8138/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfgA/nostruct-align/1qfgA.t2k-w0.5.mod (nostruct-align/1qfgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfgA/nostruct-align/1qfgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.700855
/projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t2k-w0.5.mod(21):  Reading nostruct-align/1dfd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-24970/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t2k-w0.5.mod (nostruct-align/1dfd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.617859
/projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t2k-w0.5.mod(21):  Reading nostruct-align/1ryt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25931/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t2k-w0.5.mod (nostruct-align/1ryt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.901873
/projects/compbio/experiments/models.97/pdb/1e/1eq2A/nostruct-align/1eq2A.t2k-w0.5.mod(22):  Reading nostruct-align/1eq2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24020/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq2A/nostruct-align/1eq2A.t2k-w0.5.mod (nostruct-align/1eq2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eq2A/nostruct-align/1eq2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.783878
/projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t2k-w0.5.mod(21):  Reading nostruct-align/1mngA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-19700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t2k-w0.5.mod (nostruct-align/1mngA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.213902
/projects/compbio/experiments/models.97/pdb/1q/1qmqA/nostruct-align/1qmqA.t2k-w0.5.mod(21):  Reading nostruct-align/1qmqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-7707/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmqA/nostruct-align/1qmqA.t2k-w0.5.mod (nostruct-align/1qmqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmqA/nostruct-align/1qmqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.837894
/projects/compbio/experiments/models.97/pdb/1f/1f8xA/nostruct-align/1f8xA.t2k-w0.5.mod(21):  Reading nostruct-align/1f8xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-26703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8xA/nostruct-align/1f8xA.t2k-w0.5.mod (nostruct-align/1f8xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f8xA/nostruct-align/1f8xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.334858
/projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-w0.5.mod(22):  Reading nostruct-align/1kpf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8602/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-w0.5.mod (nostruct-align/1kpf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.984859
/projects/compbio/experiments/models.97/pdb/1k/1k4gA/nostruct-align/1k4gA.t2k-w0.5.mod(22):  Reading nostruct-align/1k4gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-7295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4gA/nostruct-align/1k4gA.t2k-w0.5.mod (nostruct-align/1k4gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k4gA/nostruct-align/1k4gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.914873
/projects/compbio/experiments/models.97/pdb/5c/5cpp/nostruct-align/5cpp.t2k-w0.5.mod(21):  Reading nostruct-align/5cpp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-31450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5c/5cpp/nostruct-align/5cpp.t2k-w0.5.mod (nostruct-align/5cpp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5c/5cpp/nostruct-align/5cpp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.486900
/projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-w0.5.mod(22):  Reading nostruct-align/1bu8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25637/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-w0.5.mod (nostruct-align/1bu8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bu8A/nostruct-align/1bu8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.858864
/projects/compbio/experiments/models.97/pdb/1a/1ac6A/nostruct-align/1ac6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ac6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-28500/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ac6A/nostruct-align/1ac6A.t2k-w0.5.mod (nostruct-align/1ac6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ac6A/nostruct-align/1ac6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.699856
/projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t2k-w0.5.mod(21):  Reading nostruct-align/1a04A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-18499/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t2k-w0.5.mod (nostruct-align/1a04A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.162874
/projects/compbio/experiments/models.97/pdb/3r/3rnt/nostruct-align/3rnt.t2k-w0.5.mod(21):  Reading nostruct-align/3rnt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-31165/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rnt/nostruct-align/3rnt.t2k-w0.5.mod (nostruct-align/3rnt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3r/3rnt/nostruct-align/3rnt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.692898
/projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k-w0.5.mod(22):  Reading nostruct-align/1goiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-11218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k-w0.5.mod (nostruct-align/1goiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1goiA/nostruct-align/1goiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.328892
/projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t2k-w0.5.mod(21):  Reading nostruct-align/1dfx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22238/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t2k-w0.5.mod (nostruct-align/1dfx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.745876
/projects/compbio/experiments/models.97/pdb/1d/1dleA/nostruct-align/1dleA.t2k-w0.5.mod(21):  Reading nostruct-align/1dleA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-20210/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dleA/nostruct-align/1dleA.t2k-w0.5.mod (nostruct-align/1dleA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dleA/nostruct-align/1dleA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.054867
/projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t2k-w0.5.mod(22):  Reading nostruct-align/1d9cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1653/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t2k-w0.5.mod (nostruct-align/1d9cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.687866
/projects/compbio/experiments/models.97/pdb/1h/1h8mA/nostruct-align/1h8mA.t2k-w0.5.mod(21):  Reading nostruct-align/1h8mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-17570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8mA/nostruct-align/1h8mA.t2k-w0.5.mod (nostruct-align/1h8mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8mA/nostruct-align/1h8mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.440891
/projects/compbio/experiments/models.97/pdb/1e/1ehkA/nostruct-align/1ehkA.t2k-w0.5.mod(21):  Reading nostruct-align/1ehkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-1914/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehkA/nostruct-align/1ehkA.t2k-w0.5.mod (nostruct-align/1ehkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ehkA/nostruct-align/1ehkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.471891
/projects/compbio/experiments/models.97/pdb/1p/1pjbA/nostruct-align/1pjbA.t2k-w0.5.mod(21):  Reading nostruct-align/1pjbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-28359/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pjbA/nostruct-align/1pjbA.t2k-w0.5.mod (nostruct-align/1pjbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pjbA/nostruct-align/1pjbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.329880
/projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t2k-w0.5.mod(21):  Reading nostruct-align/1rzl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-14884/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t2k-w0.5.mod (nostruct-align/1rzl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.680855
/projects/compbio/experiments/models.97/pdb/1e/1ehkC/nostruct-align/1ehkC.t2k-w0.5.mod(22):  Reading nostruct-align/1ehkC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehkC/nostruct-align/1ehkC.t2k-w0.5.mod (nostruct-align/1ehkC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ehkC/nostruct-align/1ehkC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.538898
/projects/compbio/experiments/models.97/pdb/1i/1i4sA/nostruct-align/1i4sA.t2k-w0.5.mod(22):  Reading nostruct-align/1i4sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4sA/nostruct-align/1i4sA.t2k-w0.5.mod (nostruct-align/1i4sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4sA/nostruct-align/1i4sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.007885
/projects/compbio/experiments/models.97/pdb/1g/1gx1A/nostruct-align/1gx1A.t2k-w0.5.mod(22):  Reading nostruct-align/1gx1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19674/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gx1A/nostruct-align/1gx1A.t2k-w0.5.mod (nostruct-align/1gx1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gx1A/nostruct-align/1gx1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.847866
/projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t2k-w0.5.mod(22):  Reading nostruct-align/1qfhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9633/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t2k-w0.5.mod (nostruct-align/1qfhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.523907
/projects/compbio/experiments/models.97/pdb/1f/1f1oA/nostruct-align/1f1oA.t2k-w0.5.mod(21):  Reading nostruct-align/1f1oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-26336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1oA/nostruct-align/1f1oA.t2k-w0.5.mod (nostruct-align/1f1oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f1oA/nostruct-align/1f1oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.340891
/projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t2k-w0.5.mod(21):  Reading nostruct-align/1hryA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-7077/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t2k-w0.5.mod (nostruct-align/1hryA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.485895
/projects/compbio/experiments/models.97/pdb/1e/1eq3A/nostruct-align/1eq3A.t2k-w0.5.mod(21):  Reading nostruct-align/1eq3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-11301/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq3A/nostruct-align/1eq3A.t2k-w0.5.mod (nostruct-align/1eq3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eq3A/nostruct-align/1eq3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.253859
/projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t2k-w0.5.mod(21):  Reading nostruct-align/2vik.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t2k-w0.5.mod (nostruct-align/2vik.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.142899
/projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t2k-w0.5.mod(21):  Reading nostruct-align/1zaaC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25445/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t2k-w0.5.mod (nostruct-align/1zaaC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -41.683907
/projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-24658/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k-w0.5.mod (nostruct-align/1b9oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.946911
/projects/compbio/experiments/models.97/pdb/1q/1qmrA/nostruct-align/1qmrA.t2k-w0.5.mod(22):  Reading nostruct-align/1qmrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22973/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmrA/nostruct-align/1qmrA.t2k-w0.5.mod (nostruct-align/1qmrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmrA/nostruct-align/1qmrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.578903
/projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t2k-w0.5.mod(21):  Reading nostruct-align/2vil.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9373/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t2k-w0.5.mod (nostruct-align/2vil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.142899
/projects/compbio/experiments/models.97/pdb/1f/1f8yA/nostruct-align/1f8yA.t2k-w0.5.mod(22):  Reading nostruct-align/1f8yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12603/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f8yA/nostruct-align/1f8yA.t2k-w0.5.mod (nostruct-align/1f8yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f8yA/nostruct-align/1f8yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.334858
/projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t2k-w0.5.mod(22):  Reading nostruct-align/1qo0D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t2k-w0.5.mod (nostruct-align/1qo0D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.350878
/projects/compbio/experiments/models.97/pdb/1f/1fm9D/nostruct-align/1fm9D.t2k-w0.5.mod(21):  Reading nostruct-align/1fm9D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-21271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fm9D/nostruct-align/1fm9D.t2k-w0.5.mod (nostruct-align/1fm9D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fm9D/nostruct-align/1fm9D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.458910
/projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t2k-w0.5.mod(22):  Reading nostruct-align/2gmfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17488/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t2k-w0.5.mod (nostruct-align/2gmfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.586855
/projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t2k-w0.5.mod(21):  Reading nostruct-align/1lylA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-27943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t2k-w0.5.mod (nostruct-align/1lylA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.209854
/projects/compbio/experiments/models.97/pdb/1i/1ivhA/nostruct-align/1ivhA.t2k-w0.5.mod(22):  Reading nostruct-align/1ivhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ivhA/nostruct-align/1ivhA.t2k-w0.5.mod (nostruct-align/1ivhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ivhA/nostruct-align/1ivhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.992874
/projects/compbio/experiments/models.97/pdb/1h/1hdfA/nostruct-align/1hdfA.t2k-w0.5.mod(22):  Reading nostruct-align/1hdfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-27018/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdfA/nostruct-align/1hdfA.t2k-w0.5.mod (nostruct-align/1hdfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdfA/nostruct-align/1hdfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.107880
/projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t2k-w0.5.mod(21):  Reading nostruct-align/1aayA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-13203/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t2k-w0.5.mod (nostruct-align/1aayA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -41.847900
/projects/compbio/experiments/models.97/pdb/1a/1a05A/nostruct-align/1a05A.t2k-w0.5.mod(21):  Reading nostruct-align/1a05A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3050/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a05A/nostruct-align/1a05A.t2k-w0.5.mod (nostruct-align/1a05A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a05A/nostruct-align/1a05A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.571875
/projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-w0.5.mod(22):  Reading nostruct-align/1uteA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26073/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-w0.5.mod (nostruct-align/1uteA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.668882
/projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t2k-w0.5.mod(21):  Reading nostruct-align/2anhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-4210/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t2k-w0.5.mod (nostruct-align/2anhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.634895
/projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t2k-w0.5.mod(22):  Reading nostruct-align/1pjcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-6464/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t2k-w0.5.mod (nostruct-align/1pjcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.179907
/projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t2k-w0.5.mod(22):  Reading nostruct-align/1dlfH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3278/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t2k-w0.5.mod (nostruct-align/1dlfH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.652889
/projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-w0.5.mod(22):  Reading nostruct-align/1behA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-3875/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-w0.5.mod (nostruct-align/1behA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.122890
/projects/compbio/experiments/models.97/pdb/1i/1i4tB/nostruct-align/1i4tB.t2k-w0.5.mod(21):  Reading nostruct-align/1i4tB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-8503/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4tB/nostruct-align/1i4tB.t2k-w0.5.mod (nostruct-align/1i4tB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4tB/nostruct-align/1i4tB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.270857
/projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t2k-w0.5.mod(22):  Reading nostruct-align/1dlfL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-25408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t2k-w0.5.mod (nostruct-align/1dlfL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.139891
/projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t2k-w0.5.mod(21):  Reading nostruct-align/1hrzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28645/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t2k-w0.5.mod (nostruct-align/1hrzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.479874
/projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t2k-w0.5.mod(21):  Reading nostruct-align/1rboC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-31553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t2k-w0.5.mod (nostruct-align/1rboC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.392872
/projects/compbio/experiments/models.97/pdb/6t/6tmnE/nostruct-align/6tmnE.t2k-w0.5.mod(21):  Reading nostruct-align/6tmnE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-3870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6t/6tmnE/nostruct-align/6tmnE.t2k-w0.5.mod (nostruct-align/6tmnE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6t/6tmnE/nostruct-align/6tmnE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.573860
/projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-6570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t2k-w0.5.mod (nostruct-align/1b9pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.629896
/projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-w0.5.mod(22):  Reading nostruct-align/1jkeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7989/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-w0.5.mod (nostruct-align/1jkeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkeA/nostruct-align/1jkeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.413893
/projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k-w0.5.mod(22):  Reading nostruct-align/1dhn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30785/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k-w0.5.mod (nostruct-align/1dhn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.237894
/projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-w0.5.mod(22):  Reading nostruct-align/1k4iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-w0.5.mod (nostruct-align/1k4iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k4iA/nostruct-align/1k4iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.957861
/projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t2k-w0.5.mod(21):  Reading nostruct-align/1dhr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t2k-w0.5.mod (nostruct-align/1dhr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.747864
/projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t2k-w0.5.mod(22):  Reading nostruct-align/1dhs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27015/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t2k-w0.5.mod (nostruct-align/1dhs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.418884
/projects/compbio/experiments/models.97/pdb/1f/1fseA/nostruct-align/1fseA.t2k-w0.5.mod(22):  Reading nostruct-align/1fseA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9454/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fseA/nostruct-align/1fseA.t2k-w0.5.mod (nostruct-align/1fseA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fseA/nostruct-align/1fseA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.569878
/projects/compbio/experiments/models.97/pdb/1l/1l0oA/nostruct-align/1l0oA.t2k-w0.5.mod(22):  Reading nostruct-align/1l0oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-29027/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l0oA/nostruct-align/1l0oA.t2k-w0.5.mod (nostruct-align/1l0oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l0oA/nostruct-align/1l0oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.357868
/projects/compbio/experiments/models.97/pdb/1k/1krn/nostruct-align/1krn.t2k-w0.5.mod(21):  Reading nostruct-align/1krn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1910/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1krn/nostruct-align/1krn.t2k-w0.5.mod (nostruct-align/1krn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1krn/nostruct-align/1krn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.050911
/projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t2k-w0.5.mod(21):  Reading nostruct-align/1dhx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-29466/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t2k-w0.5.mod (nostruct-align/1dhx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.267857
/projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t2k-w0.5.mod(21):  Reading nostruct-align/1dhy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t2k-w0.5.mod (nostruct-align/1dhy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.872856
/projects/compbio/experiments/models.97/pdb/1d/1d9eA/nostruct-align/1d9eA.t2k-w0.5.mod(21):  Reading nostruct-align/1d9eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-18401/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9eA/nostruct-align/1d9eA.t2k-w0.5.mod (nostruct-align/1d9eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d9eA/nostruct-align/1d9eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.785900
/projects/compbio/experiments/models.97/pdb/1f/1fzoA/nostruct-align/1fzoA.t2k-w0.5.mod(22):  Reading nostruct-align/1fzoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-30819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzoA/nostruct-align/1fzoA.t2k-w0.5.mod (nostruct-align/1fzoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzoA/nostruct-align/1fzoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.687870
/projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t2k-w0.5.mod(21):  Reading nostruct-align/1krs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9412/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t2k-w0.5.mod (nostruct-align/1krs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.825882
/projects/compbio/experiments/models.97/pdb/1f/1fzoB/nostruct-align/1fzoB.t2k-w0.5.mod(21):  Reading nostruct-align/1fzoB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-24874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzoB/nostruct-align/1fzoB.t2k-w0.5.mod (nostruct-align/1fzoB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzoB/nostruct-align/1fzoB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.409880
/projects/compbio/experiments/models.97/pdb/1i/1igwA/nostruct-align/1igwA.t2k-w0.5.mod(22):  Reading nostruct-align/1igwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4172/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1igwA/nostruct-align/1igwA.t2k-w0.5.mod (nostruct-align/1igwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1igwA/nostruct-align/1igwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.362856
/projects/compbio/experiments/models.97/pdb/1z/1zec/nostruct-align/1zec.t2k-w0.5.mod(21):  Reading nostruct-align/1zec.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-2684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zec/nostruct-align/1zec.t2k-w0.5.mod (nostruct-align/1zec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zec/nostruct-align/1zec.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.131863
/projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-w0.5.mod(22):  Reading nostruct-align/1e5kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-w0.5.mod (nostruct-align/1e5kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5kA/nostruct-align/1e5kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.833874
/projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-w0.5.mod(21):  Reading nostruct-align/1ii5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-22802/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-w0.5.mod (nostruct-align/1ii5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ii5A/nostruct-align/1ii5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.144878
/projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-w0.5.mod(22):  Reading nostruct-align/1i4uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15405/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-w0.5.mod (nostruct-align/1i4uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4uA/nostruct-align/1i4uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.436880
/projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t2k-w0.5.mod(21):  Reading nostruct-align/1qfjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5864/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t2k-w0.5.mod (nostruct-align/1qfjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.954851
/projects/compbio/experiments/models.97/pdb/1h/1ht9A/nostruct-align/1ht9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ht9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-24320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1ht9A/nostruct-align/1ht9A.t2k-w0.5.mod (nostruct-align/1ht9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1ht9A/nostruct-align/1ht9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.366865
/projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t2k-w0.5.mod(21):  Reading nostruct-align/1dih.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-1125/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t2k-w0.5.mod (nostruct-align/1dih.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.186853
/projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t2k-w0.5.mod(21):  Reading nostruct-align/1apmE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-16982/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t2k-w0.5.mod (nostruct-align/1apmE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.562864
/projects/compbio/experiments/models.97/pdb/1q/1qo2A/nostruct-align/1qo2A.t2k-w0.5.mod(22):  Reading nostruct-align/1qo2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-13131/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo2A/nostruct-align/1qo2A.t2k-w0.5.mod (nostruct-align/1qo2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qo2A/nostruct-align/1qo2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.027895
/projects/compbio/experiments/models.97/pdb/1q/1qmtA/nostruct-align/1qmtA.t2k-w0.5.mod(21):  Reading nostruct-align/1qmtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-25231/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmtA/nostruct-align/1qmtA.t2k-w0.5.mod (nostruct-align/1qmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmtA/nostruct-align/1qmtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.095850
/projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t2k-w0.5.mod(22):  Reading nostruct-align/1dik.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13441/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t2k-w0.5.mod (nostruct-align/1dik.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.927879
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Reading nostruct-align/1hzdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -35.932896
/projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t2k-w0.5.mod(22):  Reading nostruct-align/1apmI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13499/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t2k-w0.5.mod (nostruct-align/1apmI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.149885
/projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-w0.5.mod(22):  Reading nostruct-align/1din.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15283/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-w0.5.mod (nostruct-align/1din.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.622858
/projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-w0.5.mod(22):  Reading nostruct-align/1c75A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-14279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-w0.5.mod (nostruct-align/1c75A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.780884
/projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-w0.5.mod(22):  Reading nostruct-align/1hdhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-7186/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-w0.5.mod (nostruct-align/1hdhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdhA/nostruct-align/1hdhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.151878
/projects/compbio/experiments/models.97/pdb/1f/1fsfA/nostruct-align/1fsfA.t2k-w0.5.mod(22):  Reading nostruct-align/1fsfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsfA/nostruct-align/1fsfA.t2k-w0.5.mod (nostruct-align/1fsfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsfA/nostruct-align/1fsfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.027866
/projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t2k-w0.5.mod(22):  Reading nostruct-align/3pmgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14268/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t2k-w0.5.mod (nostruct-align/3pmgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.683872
/projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t2k-w0.5.mod(22):  Reading nostruct-align/1div.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-9821/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t2k-w0.5.mod (nostruct-align/1div.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.792866
/projects/compbio/experiments/models.97/pdb/1k/1knvA/nostruct-align/1knvA.t2k-w0.5.mod(22):  Reading nostruct-align/1knvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3583/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knvA/nostruct-align/1knvA.t2k-w0.5.mod (nostruct-align/1knvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1knvA/nostruct-align/1knvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.231911
/projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t2k-w0.5.mod(21):  Reading nostruct-align/1dlhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-13956/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t2k-w0.5.mod (nostruct-align/1dlhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.931887
/projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-w0.5.mod(22):  Reading nostruct-align/2nacA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13793/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-w0.5.mod (nostruct-align/2nacA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.705898
/projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t2k-w0.5.mod(21):  Reading nostruct-align/1ksr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-16281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t2k-w0.5.mod (nostruct-align/1ksr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.375906
/projects/compbio/experiments/models.97/pdb/1h/1h8pA/nostruct-align/1h8pA.t2k-w0.5.mod(22):  Reading nostruct-align/1h8pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-19724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8pA/nostruct-align/1h8pA.t2k-w0.5.mod (nostruct-align/1h8pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8pA/nostruct-align/1h8pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.077858
/projects/compbio/experiments/models.97/pdb/1f/1fzpB/nostruct-align/1fzpB.t2k-w0.5.mod(22):  Reading nostruct-align/1fzpB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzpB/nostruct-align/1fzpB.t2k-w0.5.mod (nostruct-align/1fzpB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzpB/nostruct-align/1fzpB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.889851
/projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t2k-w0.5.mod(21):  Reading nostruct-align/1kst.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31010/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t2k-w0.5.mod (nostruct-align/1kst.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.305901
/projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t2k-w0.5.mod(21):  Reading nostruct-align/1a6bB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26274/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t2k-w0.5.mod (nostruct-align/1a6bB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.389908
/projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t2k-w0.5.mod(21):  Reading nostruct-align/1zfd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-9106/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t2k-w0.5.mod (nostruct-align/1zfd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.803871
/projects/compbio/experiments/models.97/pdb/1e/1eq6A/nostruct-align/1eq6A.t2k-w0.5.mod(22):  Reading nostruct-align/1eq6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-17213/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq6A/nostruct-align/1eq6A.t2k-w0.5.mod (nostruct-align/1eq6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eq6A/nostruct-align/1eq6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.063862
/projects/compbio/experiments/models.97/pdb/1b/1b9rA/nostruct-align/1b9rA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-29829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9rA/nostruct-align/1b9rA.t2k-w0.5.mod (nostruct-align/1b9rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9rA/nostruct-align/1b9rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.688904
/projects/compbio/experiments/models.97/pdb/1z/1zfo/nostruct-align/1zfo.t2k-w0.5.mod(21):  Reading nostruct-align/1zfo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-10993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zfo/nostruct-align/1zfo.t2k-w0.5.mod (nostruct-align/1zfo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zfo/nostruct-align/1zfo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.263880
/projects/compbio/experiments/models.97/pdb/1q/1qmuA/nostruct-align/1qmuA.t2k-w0.5.mod(21):  Reading nostruct-align/1qmuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-5905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmuA/nostruct-align/1qmuA.t2k-w0.5.mod (nostruct-align/1qmuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmuA/nostruct-align/1qmuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.207876
/projects/compbio/experiments/models.97/pdb/1j/1jkgA/nostruct-align/1jkgA.t2k-w0.5.mod(22):  Reading nostruct-align/1jkgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12308/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkgA/nostruct-align/1jkgA.t2k-w0.5.mod (nostruct-align/1jkgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkgA/nostruct-align/1jkgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.007910
/projects/compbio/experiments/models.97/pdb/1j/1j8eA/nostruct-align/1j8eA.t2k-w0.5.mod(22):  Reading nostruct-align/1j8eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4188/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8eA/nostruct-align/1j8eA.t2k-w0.5.mod (nostruct-align/1j8eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j8eA/nostruct-align/1j8eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.247908
/projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t2k-w0.5.mod(21):  Reading nostruct-align/1qo3C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t2k-w0.5.mod (nostruct-align/1qo3C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.802898
/projects/compbio/experiments/models.97/pdb/1j/1jkgB/nostruct-align/1jkgB.t2k-w0.5.mod(22):  Reading nostruct-align/1jkgB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkgB/nostruct-align/1jkgB.t2k-w0.5.mod (nostruct-align/1jkgB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkgB/nostruct-align/1jkgB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.196888
/projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t2k-w0.5.mod(22):  Reading nostruct-align/1kte.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8478/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t2k-w0.5.mod (nostruct-align/1kte.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.361906
/projects/compbio/experiments/models.97/pdb/1e/1ewaA/nostruct-align/1ewaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ewaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewaA/nostruct-align/1ewaA.t2k-w0.5.mod (nostruct-align/1ewaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewaA/nostruct-align/1ewaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.115896
/projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-w0.5.mod(22):  Reading nostruct-align/1g5aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-6756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-w0.5.mod (nostruct-align/1g5aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5aA/nostruct-align/1g5aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.813862
/projects/compbio/experiments/models.97/pdb/1h/1hdiA/nostruct-align/1hdiA.t2k-w0.5.mod(22):  Reading nostruct-align/1hdiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3492/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdiA/nostruct-align/1hdiA.t2k-w0.5.mod (nostruct-align/1hdiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdiA/nostruct-align/1hdiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.367853
/projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-w0.5.mod(22):  Reading nostruct-align/1fsgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-w0.5.mod (nostruct-align/1fsgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsgA/nostruct-align/1fsgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.468904
/projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t2k-w0.5.mod(21):  Reading nostruct-align/1cpcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20339/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t2k-w0.5.mod (nostruct-align/1cpcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.284872
/projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t2k-w0.5.mod(21):  Reading nostruct-align/1cpcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t2k-w0.5.mod (nostruct-align/1cpcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.382856
/projects/compbio/experiments/models.97/pdb/1w/1wejH/nostruct-align/1wejH.t2k-w0.5.mod(21):  Reading nostruct-align/1wejH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3094/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wejH/nostruct-align/1wejH.t2k-w0.5.mod (nostruct-align/1wejH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wejH/nostruct-align/1wejH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.595852
/projects/compbio/experiments/models.97/pdb/1d/1dliA/nostruct-align/1dliA.t2k-w0.5.mod(21):  Reading nostruct-align/1dliA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-2393/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dliA/nostruct-align/1dliA.t2k-w0.5.mod (nostruct-align/1dliA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dliA/nostruct-align/1dliA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.115906
/projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t2k-w0.5.mod(21):  Reading nostruct-align/2nadA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-24211/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t2k-w0.5.mod (nostruct-align/2nadA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.724867
/projects/compbio/experiments/models.97/pdb/1f/1fzqA/nostruct-align/1fzqA.t2k-w0.5.mod(21):  Reading nostruct-align/1fzqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-15407/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzqA/nostruct-align/1fzqA.t2k-w0.5.mod (nostruct-align/1fzqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzqA/nostruct-align/1fzqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.387892
/projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t2k-w0.5.mod(22):  Reading nostruct-align/2polA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17738/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t2k-w0.5.mod (nostruct-align/2polA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.271860
/projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t2k-w0.5.mod(21):  Reading nostruct-align/1a6cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-24849/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t2k-w0.5.mod (nostruct-align/1a6cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.204880
/projects/compbio/experiments/models.97/pdb/1e/1e5mA/nostruct-align/1e5mA.t2k-w0.5.mod(22):  Reading nostruct-align/1e5mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5mA/nostruct-align/1e5mA.t2k-w0.5.mod (nostruct-align/1e5mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5mA/nostruct-align/1e5mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.908903
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Reading nostruct-align/1ii7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod (nostruct-align/1ii7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.366899
/projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-w0.5.mod(22):  Reading nostruct-align/1gx5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-26167/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-w0.5.mod (nostruct-align/1gx5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gx5A/nostruct-align/1gx5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.650875
/projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t2k-w0.5.mod(21):  Reading nostruct-align/1cpcL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-5339/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t2k-w0.5.mod (nostruct-align/1cpcL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.395857
/projects/compbio/experiments/models.97/pdb/1i/1i4wA/nostruct-align/1i4wA.t2k-w0.5.mod(22):  Reading nostruct-align/1i4wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14777/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4wA/nostruct-align/1i4wA.t2k-w0.5.mod (nostruct-align/1i4wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4wA/nostruct-align/1i4wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.828899
/projects/compbio/experiments/models.97/pdb/1q/1qflA/nostruct-align/1qflA.t2k-w0.5.mod(22):  Reading nostruct-align/1qflA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-22947/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qflA/nostruct-align/1qflA.t2k-w0.5.mod (nostruct-align/1qflA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qflA/nostruct-align/1qflA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.702869
/projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t2k-w0.5.mod(21):  Reading nostruct-align/1b2iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32185/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t2k-w0.5.mod (nostruct-align/1b2iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.116911
/projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t2k-w0.5.mod(21):  Reading nostruct-align/1ktx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t2k-w0.5.mod (nostruct-align/1ktx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.290873
/projects/compbio/experiments/models.97/pdb/1f/1f1sA/nostruct-align/1f1sA.t2k-w0.5.mod(22):  Reading nostruct-align/1f1sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-22613/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1sA/nostruct-align/1f1sA.t2k-w0.5.mod (nostruct-align/1f1sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f1sA/nostruct-align/1f1sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.773903
/projects/compbio/experiments/models.97/pdb/1e/1eq7A/nostruct-align/1eq7A.t2k-w0.5.mod(22):  Reading nostruct-align/1eq7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4868/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq7A/nostruct-align/1eq7A.t2k-w0.5.mod (nostruct-align/1eq7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eq7A/nostruct-align/1eq7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.264868
/projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t2k-w0.5.mod(22):  Reading nostruct-align/1dssG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-20916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t2k-w0.5.mod (nostruct-align/1dssG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.521894
/projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-w0.5.mod(22):  Reading nostruct-align/1qmvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-15919/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-w0.5.mod (nostruct-align/1qmvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmvA/nostruct-align/1qmvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.295870
/projects/compbio/experiments/models.97/pdb/1j/1j8fA/nostruct-align/1j8fA.t2k-w0.5.mod(22):  Reading nostruct-align/1j8fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8fA/nostruct-align/1j8fA.t2k-w0.5.mod (nostruct-align/1j8fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j8fA/nostruct-align/1j8fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.166899
/projects/compbio/experiments/models.97/pdb/1k/1kgnA/nostruct-align/1kgnA.t2k-w0.5.mod(22):  Reading nostruct-align/1kgnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-3197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgnA/nostruct-align/1kgnA.t2k-w0.5.mod (nostruct-align/1kgnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kgnA/nostruct-align/1kgnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.889894
/projects/compbio/experiments/models.97/pdb/1c/1c5yB/nostruct-align/1c5yB.t2k-w0.5.mod(21):  Reading nostruct-align/1c5yB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-28127/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c5yB/nostruct-align/1c5yB.t2k-w0.5.mod (nostruct-align/1c5yB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c5yB/nostruct-align/1c5yB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.760906
/projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-w0.5.mod(22):  Reading nostruct-align/1ay7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-26945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-w0.5.mod (nostruct-align/1ay7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.956875
/projects/compbio/experiments/models.97/pdb/1g/1g5bA/nostruct-align/1g5bA.t2k-w0.5.mod(21):  Reading nostruct-align/1g5bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-13738/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5bA/nostruct-align/1g5bA.t2k-w0.5.mod (nostruct-align/1g5bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5bA/nostruct-align/1g5bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.103851
/projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t2k-w0.5.mod(21):  Reading nostruct-align/1kuh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-12574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t2k-w0.5.mod (nostruct-align/1kuh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.170866
/projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t2k-w0.5.mod(22):  Reading nostruct-align/2hipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22032/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t2k-w0.5.mod (nostruct-align/2hipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.676886
/projects/compbio/experiments/models.97/pdb/1f/1fshA/nostruct-align/1fshA.t2k-w0.5.mod(21):  Reading nostruct-align/1fshA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24040/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fshA/nostruct-align/1fshA.t2k-w0.5.mod (nostruct-align/1fshA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fshA/nostruct-align/1fshA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.645880
/projects/compbio/experiments/models.97/pdb/1j/1jrrA/nostruct-align/1jrrA.t2k-w0.5.mod(22):  Reading nostruct-align/1jrrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-7963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jrrA/nostruct-align/1jrrA.t2k-w0.5.mod (nostruct-align/1jrrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jrrA/nostruct-align/1jrrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.884890
/projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t2k-w0.5.mod(21):  Reading nostruct-align/1tbgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t2k-w0.5.mod (nostruct-align/1tbgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.019903
/projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t2k-w0.5.mod(21):  Reading nostruct-align/1kum.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-18018/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t2k-w0.5.mod (nostruct-align/1kum.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.516882
/projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-w0.5.mod(22):  Reading nostruct-align/1kp6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-2143/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-w0.5.mod (nostruct-align/1kp6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.602884
/projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t2k-w0.5.mod(22):  Reading nostruct-align/1tbgE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32659/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t2k-w0.5.mod (nostruct-align/1tbgE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.225863
/projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-w0.5.mod(21):  Reading nostruct-align/1dljA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-25256/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-w0.5.mod (nostruct-align/1dljA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dljA/nostruct-align/1dljA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.243908
/projects/compbio/experiments/models.97/pdb/1f/1fzrA/nostruct-align/1fzrA.t2k-w0.5.mod(22):  Reading nostruct-align/1fzrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-14245/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzrA/nostruct-align/1fzrA.t2k-w0.5.mod (nostruct-align/1fzrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzrA/nostruct-align/1fzrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.824894
/projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t2k-w0.5.mod(21):  Reading nostruct-align/1a6dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-16561/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t2k-w0.5.mod (nostruct-align/1a6dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.177881
/projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t2k-w0.5.mod(22):  Reading nostruct-align/1qfmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t2k-w0.5.mod (nostruct-align/1qfmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.019871
/projects/compbio/experiments/models.97/pdb/1d/1du2A/nostruct-align/1du2A.t2k-w0.5.mod(21):  Reading nostruct-align/1du2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-26218/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1du2A/nostruct-align/1du2A.t2k-w0.5.mod (nostruct-align/1du2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1du2A/nostruct-align/1du2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.852903
/projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-w0.5.mod(22):  Reading nostruct-align/1f32A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-11748/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-w0.5.mod (nostruct-align/1f32A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f32A/nostruct-align/1f32A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.945902
/projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t2k-w0.5.mod(21):  Reading nostruct-align/1dlc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-8680/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t2k-w0.5.mod (nostruct-align/1dlc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.747854
/projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t2k-w0.5.mod(22):  Reading nostruct-align/1nciA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-26429/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t2k-w0.5.mod (nostruct-align/1nciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.642874
/projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t2k-w0.5.mod(21):  Reading nostruct-align/1mnmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32101/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t2k-w0.5.mod (nostruct-align/1mnmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.509907
/projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t2k-w0.5.mod(21):  Reading nostruct-align/1mnmC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-16661/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t2k-w0.5.mod (nostruct-align/1mnmC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.204906
/projects/compbio/experiments/models.97/pdb/1h/1hzgA/nostruct-align/1hzgA.t2k-w0.5.mod(21):  Reading nostruct-align/1hzgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15171/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzgA/nostruct-align/1hzgA.t2k-w0.5.mod (nostruct-align/1hzgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hzgA/nostruct-align/1hzgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.492876
/projects/compbio/experiments/models.97/pdb/1g/1g5cA/nostruct-align/1g5cA.t2k-w0.5.mod(21):  Reading nostruct-align/1g5cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5cA/nostruct-align/1g5cA.t2k-w0.5.mod (nostruct-align/1g5cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5cA/nostruct-align/1g5cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.661888
/projects/compbio/experiments/models.97/pdb/4g/4gr1/nostruct-align/4gr1.t2k-w0.5.mod(22):  Reading nostruct-align/4gr1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2407/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4g/4gr1/nostruct-align/4gr1.t2k-w0.5.mod (nostruct-align/4gr1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4g/4gr1/nostruct-align/4gr1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.246906
/projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t2k-w0.5.mod(21):  Reading nostruct-align/1deaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-31892/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t2k-w0.5.mod (nostruct-align/1deaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.756910
/projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-w0.5.mod(22):  Reading nostruct-align/1hdkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-27239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-w0.5.mod (nostruct-align/1hdkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdkA/nostruct-align/1hdkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.940853
/projects/compbio/experiments/models.97/pdb/1f/1fsiA/nostruct-align/1fsiA.t2k-w0.5.mod(22):  Reading nostruct-align/1fsiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28651/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsiA/nostruct-align/1fsiA.t2k-w0.5.mod (nostruct-align/1fsiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsiA/nostruct-align/1fsiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.408880
/projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t2k-w0.5.mod(21):  Reading nostruct-align/1eagA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-19482/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t2k-w0.5.mod (nostruct-align/1eagA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.198879
/projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t2k-w0.5.mod(22):  Reading nostruct-align/1knyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-3469/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t2k-w0.5.mod (nostruct-align/1knyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.202852
/projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t2k-w0.5.mod(22):  Reading nostruct-align/1smlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-24408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t2k-w0.5.mod (nostruct-align/1smlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.943880
/projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t2k-w0.5.mod(21):  Reading nostruct-align/1ystH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11651/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t2k-w0.5.mod (nostruct-align/1ystH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.949888
/projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t2k-w0.5.mod(21):  Reading nostruct-align/1kvs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-3993/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t2k-w0.5.mod (nostruct-align/1kvs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.630857
/projects/compbio/experiments/models.97/pdb/1c/1cwoA/nostruct-align/1cwoA.t2k-w0.5.mod(21):  Reading nostruct-align/1cwoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19097/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwoA/nostruct-align/1cwoA.t2k-w0.5.mod (nostruct-align/1cwoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cwoA/nostruct-align/1cwoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.190857
/projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t2k-w0.5.mod(21):  Reading nostruct-align/1zid.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30375/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t2k-w0.5.mod (nostruct-align/1zid.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.618868
/projects/compbio/experiments/models.97/pdb/1i/1i4yA/nostruct-align/1i4yA.t2k-w0.5.mod(22):  Reading nostruct-align/1i4yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-14873/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i4yA/nostruct-align/1i4yA.t2k-w0.5.mod (nostruct-align/1i4yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i4yA/nostruct-align/1i4yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.036909
/projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t2k-w0.5.mod(21):  Reading nostruct-align/1qfnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-7169/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t2k-w0.5.mod (nostruct-align/1qfnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.249851
/projects/compbio/experiments/models.97/pdb/1d/1du3A/nostruct-align/1du3A.t2k-w0.5.mod(22):  Reading nostruct-align/1du3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21192/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1du3A/nostruct-align/1du3A.t2k-w0.5.mod (nostruct-align/1du3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1du3A/nostruct-align/1du3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.091896
/projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t2k-w0.5.mod(21):  Reading nostruct-align/1dmc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-15764/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t2k-w0.5.mod (nostruct-align/1dmc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.949888
/projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t2k-w0.5.mod(21):  Reading nostruct-align/1dme.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-1327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t2k-w0.5.mod (nostruct-align/1dme.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.964911
/projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k-w0.5.mod(21):  Reading nostruct-align/1eq9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-8135/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k-w0.5.mod (nostruct-align/1eq9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eq9A/nostruct-align/1eq9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.370863
/projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-w0.5.mod(22):  Reading nostruct-align/1zin.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-4336/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-w0.5.mod (nostruct-align/1zin.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.812912
/projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t2k-w0.5.mod(22):  Reading nostruct-align/1b9uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-21371/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t2k-w0.5.mod (nostruct-align/1b9uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.692888
/projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t2k-w0.5.mod(22):  Reading nostruct-align/1vppX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-27955/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t2k-w0.5.mod (nostruct-align/1vppX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.797897
/projects/compbio/experiments/models.97/pdb/1c/1cc1L/nostruct-align/1cc1L.t2k-w0.5.mod(21):  Reading nostruct-align/1cc1L.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21308/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc1L/nostruct-align/1cc1L.t2k-w0.5.mod (nostruct-align/1cc1L.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cc1L/nostruct-align/1cc1L.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.185873
/projects/compbio/experiments/models.97/pdb/1j/1j8hD/nostruct-align/1j8hD.t2k-w0.5.mod(22):  Reading nostruct-align/1j8hD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-16950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8hD/nostruct-align/1j8hD.t2k-w0.5.mod (nostruct-align/1j8hD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j8hD/nostruct-align/1j8hD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.213861
/projects/compbio/experiments/models.97/pdb/1d/1debA/nostruct-align/1debA.t2k-w0.5.mod(22):  Reading nostruct-align/1debA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31973/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1debA/nostruct-align/1debA.t2k-w0.5.mod (nostruct-align/1debA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1debA/nostruct-align/1debA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.785881
/projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t2k-w0.5.mod(21):  Reading nostruct-align/1sfcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-21640/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t2k-w0.5.mod (nostruct-align/1sfcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.190853
/projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t2k-w0.5.mod(21):  Reading nostruct-align/1dmr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-32414/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t2k-w0.5.mod (nostruct-align/1dmr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.557899
/projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t2k-w0.5.mod(21):  Reading nostruct-align/1sfcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-12942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t2k-w0.5.mod (nostruct-align/1sfcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.798853
/projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t2k-w0.5.mod(21):  Reading nostruct-align/1sfcC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10928/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t2k-w0.5.mod (nostruct-align/1sfcC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.397863
/projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t2k-w0.5.mod(21):  Reading nostruct-align/1sfcD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23177/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t2k-w0.5.mod (nostruct-align/1sfcD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.939911
/projects/compbio/experiments/models.97/pdb/1c/1cc1S/nostruct-align/1cc1S.t2k-w0.5.mod(21):  Reading nostruct-align/1cc1S.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc1S/nostruct-align/1cc1S.t2k-w0.5.mod (nostruct-align/1cc1S.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cc1S/nostruct-align/1cc1S.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.406893
/projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t2k-w0.5.mod(21):  Reading nostruct-align/1sfcE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19450/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t2k-w0.5.mod (nostruct-align/1sfcE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.170860
/projects/compbio/experiments/models.97/pdb/1k/1knzA/nostruct-align/1knzA.t2k-w0.5.mod(22):  Reading nostruct-align/1knzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-24536/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1knzA/nostruct-align/1knzA.t2k-w0.5.mod (nostruct-align/1knzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1knzA/nostruct-align/1knzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.168894
/projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t2k-w0.5.mod(22):  Reading nostruct-align/1aihA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-4869/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t2k-w0.5.mod (nostruct-align/1aihA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.592880
/projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ej0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27233/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-w0.5.mod (nostruct-align/1ej0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej0A/nostruct-align/1ej0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.807907
/projects/compbio/experiments/models.97/pdb/2p/2pooA/nostruct-align/2pooA.t2k-w0.5.mod(21):  Reading nostruct-align/2pooA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pooA/nostruct-align/2pooA.t2k-w0.5.mod (nostruct-align/2pooA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pooA/nostruct-align/2pooA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.824894
/projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k-w0.5.mod(22):  Reading nostruct-align/1e5pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k-w0.5.mod (nostruct-align/1e5pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5pA/nostruct-align/1e5pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.255905
/projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t2k-w0.5.mod(21):  Reading nostruct-align/1cwpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-30381/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t2k-w0.5.mod (nostruct-align/1cwpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.904856
/projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t2k-w0.5.mod(21):  Reading nostruct-align/1benA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-14686/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t2k-w0.5.mod (nostruct-align/1benA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.516859
/projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t2k-w0.5.mod(22):  Reading nostruct-align/1qfoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-2716/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t2k-w0.5.mod (nostruct-align/1qfoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.020906
/projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t2k-w0.5.mod(22):  Reading nostruct-align/1benB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-20817/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t2k-w0.5.mod (nostruct-align/1benB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.689882
/projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t2k-w0.5.mod(21):  Reading nostruct-align/1dsvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26644/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t2k-w0.5.mod (nostruct-align/1dsvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.207895
/projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t2k-w0.5.mod(21):  Reading nostruct-align/1qfoC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10992/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t2k-w0.5.mod (nostruct-align/1qfoC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.030865
/projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t2k-w0.5.mod(21):  Reading nostruct-align/1ar0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6229/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t2k-w0.5.mod (nostruct-align/1ar0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.586857
/projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ps1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-21439/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t2k-w0.5.mod (nostruct-align/1ps1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.002853
/projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t2k-w0.5.mod(22):  Reading nostruct-align/4sgbI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-22842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t2k-w0.5.mod (nostruct-align/4sgbI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.977911
/projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t2k-w0.5.mod(21):  Reading nostruct-align/1bn6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22828/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t2k-w0.5.mod (nostruct-align/1bn6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.574888
/projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t2k-w0.5.mod(21):  Reading nostruct-align/1blxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-9173/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t2k-w0.5.mod (nostruct-align/1blxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.085852
/projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-w0.5.mod(22):  Reading nostruct-align/1qo7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-w0.5.mod (nostruct-align/1qo7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.033894
/projects/compbio/experiments/models.97/pdb/1q/1qmyA/nostruct-align/1qmyA.t2k-w0.5.mod(22):  Reading nostruct-align/1qmyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-4238/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmyA/nostruct-align/1qmyA.t2k-w0.5.mod (nostruct-align/1qmyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmyA/nostruct-align/1qmyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.530865
/projects/compbio/experiments/models.97/pdb/1h/1hziA/nostruct-align/1hziA.t2k-w0.5.mod(22):  Reading nostruct-align/1hziA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20571/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hziA/nostruct-align/1hziA.t2k-w0.5.mod (nostruct-align/1hziA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hziA/nostruct-align/1hziA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.449902
/projects/compbio/experiments/models.97/pdb/1m/1muyA/nostruct-align/1muyA.t2k-w0.5.mod(21):  Reading nostruct-align/1muyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-2258/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1muyA/nostruct-align/1muyA.t2k-w0.5.mod (nostruct-align/1muyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1muyA/nostruct-align/1muyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.587862
/projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t2k-w0.5.mod(21):  Reading nostruct-align/1qubA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24113/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t2k-w0.5.mod (nostruct-align/1qubA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.501894
/projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t2k-w0.5.mod(21):  Reading nostruct-align/1hdmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-20799/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t2k-w0.5.mod (nostruct-align/1hdmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.216862
/projects/compbio/experiments/models.97/pdb/1j/1jruA/nostruct-align/1jruA.t2k-w0.5.mod(21):  Reading nostruct-align/1jruA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-5511/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jruA/nostruct-align/1jruA.t2k-w0.5.mod (nostruct-align/1jruA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jruA/nostruct-align/1jruA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.945850
/projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t2k-w0.5.mod(21):  Reading nostruct-align/1dnv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-2706/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t2k-w0.5.mod (nostruct-align/1dnv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.948893
/projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t2k-w0.5.mod(22):  Reading nostruct-align/1eaiC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-11942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t2k-w0.5.mod (nostruct-align/1eaiC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.080910
/projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t2k-w0.5.mod(21):  Reading nostruct-align/1smnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-18142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t2k-w0.5.mod (nostruct-align/1smnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.414892
/projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-w0.5.mod(21):  Reading nostruct-align/1h8uA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-12541/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-w0.5.mod (nostruct-align/1h8uA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8uA/nostruct-align/1h8uA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.958864
/projects/compbio/experiments/models.97/pdb/1e/1ej1A/nostruct-align/1ej1A.t2k-w0.5.mod(22):  Reading nostruct-align/1ej1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-24918/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej1A/nostruct-align/1ej1A.t2k-w0.5.mod (nostruct-align/1ej1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej1A/nostruct-align/1ej1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.161880
/projects/compbio/experiments/models.97/pdb/2t/2tgpI/nostruct-align/2tgpI.t2k-w0.5.mod(21):  Reading nostruct-align/2tgpI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-28733/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2tgpI/nostruct-align/2tgpI.t2k-w0.5.mod (nostruct-align/2tgpI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2tgpI/nostruct-align/2tgpI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.491877
/projects/compbio/experiments/models.97/pdb/1k/1kxu/nostruct-align/1kxu.t2k-w0.5.mod(21):  Reading nostruct-align/1kxu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18610/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kxu/nostruct-align/1kxu.t2k-w0.5.mod (nostruct-align/1kxu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kxu/nostruct-align/1kxu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.207874
/projects/compbio/experiments/models.97/pdb/1i/1i69A/nostruct-align/1i69A.t2k-w0.5.mod(21):  Reading nostruct-align/1i69A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16825/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i69A/nostruct-align/1i69A.t2k-w0.5.mod (nostruct-align/1i69A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i69A/nostruct-align/1i69A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.485903
/projects/compbio/experiments/models.97/pdb/2m/2mllB/nostruct-align/2mllB.t2k-w0.5.mod(22):  Reading nostruct-align/2mllB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-17112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mllB/nostruct-align/2mllB.t2k-w0.5.mod (nostruct-align/2mllB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mllB/nostruct-align/2mllB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.601862
/projects/compbio/experiments/models.97/pdb/1f/1fdyA/nostruct-align/1fdyA.t2k-w0.5.mod(21):  Reading nostruct-align/1fdyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-5995/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fdyA/nostruct-align/1fdyA.t2k-w0.5.mod (nostruct-align/1fdyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fdyA/nostruct-align/1fdyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.933903
/projects/compbio/experiments/models.97/pdb/1k/1kvdA/nostruct-align/1kvdA.t2k-w0.5.mod(21):  Reading nostruct-align/1kvdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvdA/nostruct-align/1kvdA.t2k-w0.5.mod (nostruct-align/1kvdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kvdA/nostruct-align/1kvdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.038874
/projects/compbio/experiments/models.97/pdb/1k/1kvdB/nostruct-align/1kvdB.t2k-w0.5.mod(21):  Reading nostruct-align/1kvdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-17401/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvdB/nostruct-align/1kvdB.t2k-w0.5.mod (nostruct-align/1kvdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kvdB/nostruct-align/1kvdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.926876
/projects/compbio/experiments/models.97/pdb/1f/1f35A/nostruct-align/1f35A.t2k-w0.5.mod(22):  Reading nostruct-align/1f35A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5734/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f35A/nostruct-align/1f35A.t2k-w0.5.mod (nostruct-align/1f35A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f35A/nostruct-align/1f35A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.804909
/projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t2k-w0.5.mod(21):  Reading nostruct-align/1ounA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-18828/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t2k-w0.5.mod (nostruct-align/1ounA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.109909
/projects/compbio/experiments/models.97/pdb/1j/1jdbB/nostruct-align/1jdbB.t2k-w0.5.mod(22):  Reading nostruct-align/1jdbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9673/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdbB/nostruct-align/1jdbB.t2k-w0.5.mod (nostruct-align/1jdbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdbB/nostruct-align/1jdbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.530851
/projects/compbio/experiments/models.97/pdb/1c/1cc3A/nostruct-align/1cc3A.t2k-w0.5.mod(21):  Reading nostruct-align/1cc3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26034/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc3A/nostruct-align/1cc3A.t2k-w0.5.mod (nostruct-align/1cc3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cc3A/nostruct-align/1cc3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.076872
/projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t2k-w0.5.mod(21):  Reading nostruct-align/1cauA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-24932/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t2k-w0.5.mod (nostruct-align/1cauA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.274895
/projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t2k-w0.5.mod(21):  Reading nostruct-align/1cauB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-24897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t2k-w0.5.mod (nostruct-align/1cauB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.336857
/projects/compbio/experiments/models.97/pdb/1c/1c01A/nostruct-align/1c01A.t2k-w0.5.mod(21):  Reading nostruct-align/1c01A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-32662/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c01A/nostruct-align/1c01A.t2k-w0.5.mod (nostruct-align/1c01A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c01A/nostruct-align/1c01A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.765871
/projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t2k-w0.5.mod(21):  Reading nostruct-align/1sat.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-24158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t2k-w0.5.mod (nostruct-align/1sat.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.840860
/projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t2k-w0.5.mod(21):  Reading nostruct-align/1bn7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-29270/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t2k-w0.5.mod (nostruct-align/1bn7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.451897
/projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t2k-w0.5.mod(21):  Reading nostruct-align/1doi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-1026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t2k-w0.5.mod (nostruct-align/1doi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.799858
/projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-w0.5.mod(22):  Reading nostruct-align/1b9wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7631/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-w0.5.mod (nostruct-align/1b9wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.577862
/projects/compbio/experiments/models.97/pdb/1q/1qmzB/nostruct-align/1qmzB.t2k-w0.5.mod(22):  Reading nostruct-align/1qmzB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18720/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qmzB/nostruct-align/1qmzB.t2k-w0.5.mod (nostruct-align/1qmzB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qmzB/nostruct-align/1qmzB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.087883
/projects/compbio/experiments/models.97/pdb/1g/1ghhA/nostruct-align/1ghhA.t2k-w0.5.mod(21):  Reading nostruct-align/1ghhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-8809/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghhA/nostruct-align/1ghhA.t2k-w0.5.mod (nostruct-align/1ghhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ghhA/nostruct-align/1ghhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.374905
/projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-w0.5.mod(22):  Reading nostruct-align/1ewfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2251/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-w0.5.mod (nostruct-align/1ewfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewfA/nostruct-align/1ewfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.385862
/projects/compbio/experiments/models.97/pdb/1f/1fslA/nostruct-align/1fslA.t2k-w0.5.mod(22):  Reading nostruct-align/1fslA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20087/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fslA/nostruct-align/1fslA.t2k-w0.5.mod (nostruct-align/1fslA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fslA/nostruct-align/1fslA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.604874
/projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-w0.5.mod(22):  Reading nostruct-align/1eajA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-23434/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-w0.5.mod (nostruct-align/1eajA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eajA/nostruct-align/1eajA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.026897
/projects/compbio/experiments/models.97/pdb/1i/1ib2A/nostruct-align/1ib2A.t2k-w0.5.mod(21):  Reading nostruct-align/1ib2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-1123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ib2A/nostruct-align/1ib2A.t2k-w0.5.mod (nostruct-align/1ib2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ib2A/nostruct-align/1ib2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.049883
/projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t2k-w0.5.mod(22):  Reading nostruct-align/1vpsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-22048/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t2k-w0.5.mod (nostruct-align/1vpsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.019909
/projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t2k-w0.5.mod(21):  Reading nostruct-align/1vpsB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-27157/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t2k-w0.5.mod (nostruct-align/1vpsB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.995903
/projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-w0.5.mod(22):  Reading nostruct-align/1oneA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15018/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-w0.5.mod (nostruct-align/1oneA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.127871
/projects/compbio/experiments/models.97/pdb/1h/1hm6A/nostruct-align/1hm6A.t2k-w0.5.mod(22):  Reading nostruct-align/1hm6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9445/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hm6A/nostruct-align/1hm6A.t2k-w0.5.mod (nostruct-align/1hm6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hm6A/nostruct-align/1hm6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.538906
/projects/compbio/experiments/models.97/pdb/1h/1h8vA/nostruct-align/1h8vA.t2k-w0.5.mod(22):  Reading nostruct-align/1h8vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-24706/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h8vA/nostruct-align/1h8vA.t2k-w0.5.mod (nostruct-align/1h8vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h8vA/nostruct-align/1h8vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.959867
/projects/compbio/experiments/models.97/pdb/1e/1ej2A/nostruct-align/1ej2A.t2k-w0.5.mod(22):  Reading nostruct-align/1ej2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-29905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej2A/nostruct-align/1ej2A.t2k-w0.5.mod (nostruct-align/1ej2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej2A/nostruct-align/1ej2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.174854
/projects/compbio/experiments/models.97/pdb/1e/1e5rA/nostruct-align/1e5rA.t2k-w0.5.mod(22):  Reading nostruct-align/1e5rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-26618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5rA/nostruct-align/1e5rA.t2k-w0.5.mod (nostruct-align/1e5rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5rA/nostruct-align/1e5rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.988863
/projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-w0.5.mod(22):  Reading nostruct-align/1kveA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3171/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-w0.5.mod (nostruct-align/1kveA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.038874
/projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-w0.5.mod(22):  Reading nostruct-align/1sbp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-2208/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-w0.5.mod (nostruct-align/1sbp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.018906
/projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t2k-w0.5.mod(21):  Reading nostruct-align/1qfqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-18540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t2k-w0.5.mod (nostruct-align/1qfqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.032866
/projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k-w0.5.mod(22):  Reading nostruct-align/1kveB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-4105/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k-w0.5.mod (nostruct-align/1kveB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.926876
/projects/compbio/experiments/models.97/pdb/1d/1dsxA/nostruct-align/1dsxA.t2k-w0.5.mod(22):  Reading nostruct-align/1dsxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-9186/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsxA/nostruct-align/1dsxA.t2k-w0.5.mod (nostruct-align/1dsxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dsxA/nostruct-align/1dsxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.930868
/projects/compbio/experiments/models.97/pdb/1c/1c02A/nostruct-align/1c02A.t2k-w0.5.mod(22):  Reading nostruct-align/1c02A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c02A/nostruct-align/1c02A.t2k-w0.5.mod (nostruct-align/1c02A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c02A/nostruct-align/1c02A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.291859
/projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t2k-w0.5.mod(21):  Reading nostruct-align/1dpe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-22037/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t2k-w0.5.mod (nostruct-align/1dpe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.749859
/projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t2k-w0.5.mod(21):  Reading nostruct-align/1aijL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-21107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t2k-w0.5.mod (nostruct-align/1aijL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.784863
/projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k-w0.5.mod(21):  Reading nostruct-align/1bn8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-17387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k-w0.5.mod (nostruct-align/1bn8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.270857
/projects/compbio/experiments/models.97/pdb/1e/1e70M/nostruct-align/1e70M.t2k-w0.5.mod(21):  Reading nostruct-align/1e70M.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc80-13048/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e70M/nostruct-align/1e70M.t2k-w0.5.mod (nostruct-align/1e70M.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e70M/nostruct-align/1e70M.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.694901
/projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t2k-w0.5.mod(21):  Reading nostruct-align/1flcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-13215/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t2k-w0.5.mod (nostruct-align/1flcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.627905
/projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t2k-w0.5.mod(21):  Reading nostruct-align/1b9xB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-14747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t2k-w0.5.mod (nostruct-align/1b9xB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.161880
/projects/compbio/experiments/models.97/pdb/1f/1f9aA/nostruct-align/1f9aA.t2k-w0.5.mod(21):  Reading nostruct-align/1f9aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-19670/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9aA/nostruct-align/1f9aA.t2k-w0.5.mod (nostruct-align/1f9aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f9aA/nostruct-align/1f9aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.495909
/projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t2k-w0.5.mod(21):  Reading nostruct-align/1flcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20908/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t2k-w0.5.mod (nostruct-align/1flcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.146858
/projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t2k-w0.5.mod(21):  Reading nostruct-align/1jkmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23473/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t2k-w0.5.mod (nostruct-align/1jkmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.657909
/projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t2k-w0.5.mod(21):  Reading nostruct-align/1jkmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-27800/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t2k-w0.5.mod (nostruct-align/1jkmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.970894
/projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-w0.5.mod(22):  Reading nostruct-align/1kgsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-15347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-w0.5.mod (nostruct-align/1kgsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kgsA/nostruct-align/1kgsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.257902
/projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t2k-w0.5.mod(21):  Reading nostruct-align/1dpo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-6013/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t2k-w0.5.mod (nostruct-align/1dpo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.391903
/projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t2k-w0.5.mod(21):  Reading nostruct-align/2olbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-2612/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t2k-w0.5.mod (nostruct-align/2olbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.423906
/projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-w0.5.mod(22):  Reading nostruct-align/1hdoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29994/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-w0.5.mod (nostruct-align/1hdoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hdoA/nostruct-align/1hdoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.357874
/projects/compbio/experiments/models.97/pdb/1l/1l0wA/nostruct-align/1l0wA.t2k-w0.5.mod(22):  Reading nostruct-align/1l0wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15776/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l0wA/nostruct-align/1l0wA.t2k-w0.5.mod (nostruct-align/1l0wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l0wA/nostruct-align/1l0wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.485863
/projects/compbio/experiments/models.97/pdb/1i/1ib3A/nostruct-align/1ib3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ib3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21447/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ib3A/nostruct-align/1ib3A.t2k-w0.5.mod (nostruct-align/1ib3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ib3A/nostruct-align/1ib3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.324903
/projects/compbio/experiments/models.97/pdb/1d/1deeG/nostruct-align/1deeG.t2k-w0.5.mod(22):  Reading nostruct-align/1deeG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-27370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deeG/nostruct-align/1deeG.t2k-w0.5.mod (nostruct-align/1deeG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1deeG/nostruct-align/1deeG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.166903
/projects/compbio/experiments/models.97/pdb/1e/1ej3A/nostruct-align/1ej3A.t2k-w0.5.mod(21):  Reading nostruct-align/1ej3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej3A/nostruct-align/1ej3A.t2k-w0.5.mod (nostruct-align/1ej3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej3A/nostruct-align/1ej3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.584866
/projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t2k-w0.5.mod(21):  Reading nostruct-align/1aikC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t2k-w0.5.mod (nostruct-align/1aikC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.722895
/projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t2k-w0.5.mod(21):  Reading nostruct-align/1sco.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-12180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t2k-w0.5.mod (nostruct-align/1sco.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.295881
/projects/compbio/experiments/models.97/pdb/1f/1ff9A/nostruct-align/1ff9A.t2k-w0.5.mod(22):  Reading nostruct-align/1ff9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-13324/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ff9A/nostruct-align/1ff9A.t2k-w0.5.mod (nostruct-align/1ff9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ff9A/nostruct-align/1ff9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.160896
/projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t2k-w0.5.mod(21):  Reading nostruct-align/1smpI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-15061/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t2k-w0.5.mod (nostruct-align/1smpI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.248871
/projects/compbio/experiments/models.97/pdb/1f/1f37A/nostruct-align/1f37A.t2k-w0.5.mod(22):  Reading nostruct-align/1f37A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-28083/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f37A/nostruct-align/1f37A.t2k-w0.5.mod (nostruct-align/1f37A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f37A/nostruct-align/1f37A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.686911
/projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t2k-w0.5.mod(21):  Reading nostruct-align/1hsbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-29916/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t2k-w0.5.mod (nostruct-align/1hsbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.932854
/projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t2k-w0.5.mod(21):  Reading nostruct-align/1scs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-28366/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t2k-w0.5.mod (nostruct-align/1scs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.775885
/projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t2k-w0.5.mod(21):  Reading nostruct-align/1cawB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-19522/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t2k-w0.5.mod (nostruct-align/1cawB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.853878
/projects/compbio/experiments/models.97/pdb/1h/1hsbB/nostruct-align/1hsbB.t2k-w0.5.mod(21):  Reading nostruct-align/1hsbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-17765/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hsbB/nostruct-align/1hsbB.t2k-w0.5.mod (nostruct-align/1hsbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hsbB/nostruct-align/1hsbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.549900
/projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t2k-w0.5.mod(21):  Reading nostruct-align/1aikN.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-24242/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t2k-w0.5.mod (nostruct-align/1aikN.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.779860
/projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t2k-w0.5.mod(22):  Reading nostruct-align/1b9yC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-28543/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t2k-w0.5.mod (nostruct-align/1b9yC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.578880
/projects/compbio/experiments/models.97/pdb/1g/1g5hA/nostruct-align/1g5hA.t2k-w0.5.mod(22):  Reading nostruct-align/1g5hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-28625/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5hA/nostruct-align/1g5hA.t2k-w0.5.mod (nostruct-align/1g5hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5hA/nostruct-align/1g5hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.364853
/projects/compbio/experiments/models.97/pdb/1j/1jt6A/nostruct-align/1jt6A.t2k-w0.5.mod(22):  Reading nostruct-align/1jt6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-12755/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jt6A/nostruct-align/1jt6A.t2k-w0.5.mod (nostruct-align/1jt6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jt6A/nostruct-align/1jt6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.582882
/projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t2k-w0.5.mod(21):  Reading nostruct-align/8rxnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-10347/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t2k-w0.5.mod (nostruct-align/8rxnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.114851
/projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t2k-w0.5.mod(22):  Reading nostruct-align/1gotB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16432/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t2k-w0.5.mod (nostruct-align/1gotB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.968899
/projects/compbio/experiments/models.97/pdb/1d/1d9nA/nostruct-align/1d9nA.t2k-w0.5.mod(21):  Reading nostruct-align/1d9nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-26832/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9nA/nostruct-align/1d9nA.t2k-w0.5.mod (nostruct-align/1d9nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d9nA/nostruct-align/1d9nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.491882
/projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t2k-w0.5.mod(21):  Reading nostruct-align/1a6jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-19181/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t2k-w0.5.mod (nostruct-align/1a6jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.712906
/projects/compbio/experiments/models.97/pdb/1g/1gotG/nostruct-align/1gotG.t2k-w0.5.mod(22):  Reading nostruct-align/1gotG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-2387/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gotG/nostruct-align/1gotG.t2k-w0.5.mod (nostruct-align/1gotG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gotG/nostruct-align/1gotG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.533857
/projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t2k-w0.5.mod(21):  Reading nostruct-align/2bjxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-31224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t2k-w0.5.mod (nostruct-align/2bjxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.460871
/projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t2k-w0.5.mod(21):  Reading nostruct-align/1znf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t2k-w0.5.mod (nostruct-align/1znf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.464876
/projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-w0.5.mod(22):  Reading nostruct-align/1b2pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5964/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-w0.5.mod (nostruct-align/1b2pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.129890
/projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k-w0.5.mod(22):  Reading nostruct-align/3dfr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k-w0.5.mod (nostruct-align/3dfr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.349903
/projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-w0.5.mod(22):  Reading nostruct-align/1dszA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13829/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-w0.5.mod (nostruct-align/1dszA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dszA/nostruct-align/1dszA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.669907
/projects/compbio/experiments/models.97/pdb/1f/1f1zA/nostruct-align/1f1zA.t2k-w0.5.mod(22):  Reading nostruct-align/1f1zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30412/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f1zA/nostruct-align/1f1zA.t2k-w0.5.mod (nostruct-align/1f1zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f1zA/nostruct-align/1f1zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.940889
/projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t2k-w0.5.mod(22):  Reading nostruct-align/7at1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30837/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t2k-w0.5.mod (nostruct-align/7at1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.159903
/projects/compbio/experiments/models.97/pdb/1d/1dszB/nostruct-align/1dszB.t2k-w0.5.mod(21):  Reading nostruct-align/1dszB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23868/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dszB/nostruct-align/1dszB.t2k-w0.5.mod (nostruct-align/1dszB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dszB/nostruct-align/1dszB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.684862
/projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t2k-w0.5.mod(21):  Reading nostruct-align/1caxB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-8194/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t2k-w0.5.mod (nostruct-align/1caxB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.761898
/projects/compbio/experiments/models.97/pdb/1z/1znm/nostruct-align/1znm.t2k-w0.5.mod(22):  Reading nostruct-align/1znm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30493/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1znm/nostruct-align/1znm.t2k-w0.5.mod (nostruct-align/1znm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1znm/nostruct-align/1znm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.567875
/projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t2k-w0.5.mod(21):  Reading nostruct-align/1b9zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3059/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t2k-w0.5.mod (nostruct-align/1b9zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.042870
/projects/compbio/experiments/models.97/pdb/1j/1jkoC/nostruct-align/1jkoC.t2k-w0.5.mod(22):  Reading nostruct-align/1jkoC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22231/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkoC/nostruct-align/1jkoC.t2k-w0.5.mod (nostruct-align/1jkoC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkoC/nostruct-align/1jkoC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.162893
/projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t2k-w0.5.mod(21):  Reading nostruct-align/1lywA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-3069/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t2k-w0.5.mod (nostruct-align/1lywA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.060902
/projects/compbio/experiments/models.97/pdb/1d/1dro/nostruct-align/1dro.t2k-w0.5.mod(21):  Reading nostruct-align/1dro.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11639/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dro/nostruct-align/1dro.t2k-w0.5.mod (nostruct-align/1dro.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dro/nostruct-align/1dro.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.423912
/projects/compbio/experiments/models.97/pdb/1e/1ewiA/nostruct-align/1ewiA.t2k-w0.5.mod(21):  Reading nostruct-align/1ewiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-22381/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewiA/nostruct-align/1ewiA.t2k-w0.5.mod (nostruct-align/1ewiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewiA/nostruct-align/1ewiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.466877
/projects/compbio/experiments/models.97/pdb/1d/1d2eA/nostruct-align/1d2eA.t2k-w0.5.mod(21):  Reading nostruct-align/1d2eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-25174/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2eA/nostruct-align/1d2eA.t2k-w0.5.mod (nostruct-align/1d2eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2eA/nostruct-align/1d2eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.988890
/projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-w0.5.mod(22):  Reading nostruct-align/1bteA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-1075/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-w0.5.mod (nostruct-align/1bteA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.795881
/projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t2k-w0.5.mod(22):  Reading nostruct-align/1fleI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-14114/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t2k-w0.5.mod (nostruct-align/1fleI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.518860
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Reading nostruct-align/1j8mF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod (nostruct-align/1j8mF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.636900
/projects/compbio/experiments/models.97/pdb/1d/1drs/nostruct-align/1drs.t2k-w0.5.mod(21):  Reading nostruct-align/1drs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drs/nostruct-align/1drs.t2k-w0.5.mod (nostruct-align/1drs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1drs/nostruct-align/1drs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.194885
/projects/compbio/experiments/models.97/pdb/1f/1fsoA/nostruct-align/1fsoA.t2k-w0.5.mod(22):  Reading nostruct-align/1fsoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-20489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsoA/nostruct-align/1fsoA.t2k-w0.5.mod (nostruct-align/1fsoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsoA/nostruct-align/1fsoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.867861
/projects/compbio/experiments/models.97/pdb/1j/1jt7A/nostruct-align/1jt7A.t2k-w0.5.mod(22):  Reading nostruct-align/1jt7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-26853/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jt7A/nostruct-align/1jt7A.t2k-w0.5.mod (nostruct-align/1jt7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jt7A/nostruct-align/1jt7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.156874
/projects/compbio/experiments/models.97/pdb/1g/1gouA/nostruct-align/1gouA.t2k-w0.5.mod(22):  Reading nostruct-align/1gouA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23730/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gouA/nostruct-align/1gouA.t2k-w0.5.mod (nostruct-align/1gouA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gouA/nostruct-align/1gouA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.674896
/projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t2k-w0.5.mod(22):  Reading nostruct-align/1drw.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25791/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t2k-w0.5.mod (nostruct-align/1drw.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.870872
/projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-w0.5.mod(22):  Reading nostruct-align/1hm9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14278/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-w0.5.mod (nostruct-align/1hm9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hm9A/nostruct-align/1hm9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.867889
/projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t2k-w0.5.mod(21):  Reading nostruct-align/1smrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-6327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t2k-w0.5.mod (nostruct-align/1smrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.783899
/projects/compbio/experiments/models.97/pdb/1f/1fzyA/nostruct-align/1fzyA.t2k-w0.5.mod(22):  Reading nostruct-align/1fzyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-21323/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fzyA/nostruct-align/1fzyA.t2k-w0.5.mod (nostruct-align/1fzyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fzyA/nostruct-align/1fzyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.241890
/projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t2k-w0.5.mod(21):  Reading nostruct-align/1sek.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-27725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t2k-w0.5.mod (nostruct-align/1sek.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.271864
/projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t2k-w0.5.mod(21):  Reading nostruct-align/1ej5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t2k-w0.5.mod (nostruct-align/1ej5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.221899
/projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t2k-w0.5.mod(22):  Reading nostruct-align/6gsvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17360/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t2k-w0.5.mod (nostruct-align/6gsvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.066864
/projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t2k-w0.5.mod(22):  Reading nostruct-align/1bg1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-27556/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t2k-w0.5.mod (nostruct-align/1bg1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.043854
/projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-w0.5.mod(22):  Reading nostruct-align/1qftA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-12180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-w0.5.mod (nostruct-align/1qftA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.314898
/projects/compbio/experiments/models.97/pdb/1j/1jdfA/nostruct-align/1jdfA.t2k-w0.5.mod(22):  Reading nostruct-align/1jdfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19997/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdfA/nostruct-align/1jdfA.t2k-w0.5.mod (nostruct-align/1jdfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdfA/nostruct-align/1jdfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.126862
/projects/compbio/experiments/models.97/pdb/1f/1f39A/nostruct-align/1f39A.t2k-w0.5.mod(21):  Reading nostruct-align/1f39A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18095/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f39A/nostruct-align/1f39A.t2k-w0.5.mod (nostruct-align/1f39A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f39A/nostruct-align/1f39A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.074858
/projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t2k-w0.5.mod(21):  Reading nostruct-align/1c05A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-18070/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t2k-w0.5.mod (nostruct-align/1c05A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.088896
/projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t2k-w0.5.mod(21):  Reading nostruct-align/1mntA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9196/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t2k-w0.5.mod (nostruct-align/1mntA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.946890
/projects/compbio/experiments/models.97/pdb/1d/1dsj/nostruct-align/1dsj.t2k-w0.5.mod(21):  Reading nostruct-align/1dsj.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dsj/nostruct-align/1dsj.t2k-w0.5.mod (nostruct-align/1dsj.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dsj/nostruct-align/1dsj.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.365887
/projects/compbio/experiments/models.97/pdb/1e/1ewjA/nostruct-align/1ewjA.t2k-w0.5.mod(22):  Reading nostruct-align/1ewjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-21547/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewjA/nostruct-align/1ewjA.t2k-w0.5.mod (nostruct-align/1ewjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewjA/nostruct-align/1ewjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.665882
/projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t2k-w0.5.mod(22):  Reading nostruct-align/1pyaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-24765/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t2k-w0.5.mod (nostruct-align/1pyaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.127874
/projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t2k-w0.5.mod(22):  Reading nostruct-align/1pyaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t2k-w0.5.mod (nostruct-align/1pyaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.792904
/projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t2k-w0.5.mod(21):  Reading nostruct-align/1d2fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-25276/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t2k-w0.5.mod (nostruct-align/1d2fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.788872
/projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t2k-w0.5.mod(21):  Reading nostruct-align/2hbg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t2k-w0.5.mod (nostruct-align/2hbg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.773897
/projects/compbio/experiments/models.97/pdb/1j/1jt8A/nostruct-align/1jt8A.t2k-w0.5.mod(21):  Reading nostruct-align/1jt8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-22867/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jt8A/nostruct-align/1jt8A.t2k-w0.5.mod (nostruct-align/1jt8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jt8A/nostruct-align/1jt8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.318884
/projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t2k-w0.5.mod(21):  Reading nostruct-align/1sfe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-21239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t2k-w0.5.mod (nostruct-align/1sfe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.751862
/projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t2k-w0.5.mod(21):  Reading nostruct-align/4htcI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-18227/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t2k-w0.5.mod (nostruct-align/4htcI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.168896
/projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t2k-w0.5.mod(21):  Reading nostruct-align/1vbd4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t2k-w0.5.mod (nostruct-align/1vbd4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.984877
/projects/compbio/experiments/models.97/pdb/1e/1ej6A/nostruct-align/1ej6A.t2k-w0.5.mod(21):  Reading nostruct-align/1ej6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-14332/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej6A/nostruct-align/1ej6A.t2k-w0.5.mod (nostruct-align/1ej6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej6A/nostruct-align/1ej6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.857857
/projects/compbio/experiments/models.97/pdb/1e/1ehxA/nostruct-align/1ehxA.t2k-w0.5.mod(21):  Reading nostruct-align/1ehxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehxA/nostruct-align/1ehxA.t2k-w0.5.mod (nostruct-align/1ehxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ehxA/nostruct-align/1ehxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.762871
/projects/compbio/experiments/models.97/pdb/1e/1ej6B/nostruct-align/1ej6B.t2k-w0.5.mod(21):  Reading nostruct-align/1ej6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-1072/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej6B/nostruct-align/1ej6B.t2k-w0.5.mod (nostruct-align/1ej6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej6B/nostruct-align/1ej6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.569889
/projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t2k-w0.5.mod(22):  Reading nostruct-align/3daaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-9312/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t2k-w0.5.mod (nostruct-align/3daaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.351864
/projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t2k-w0.5.mod(21):  Reading nostruct-align/1cwvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-9849/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t2k-w0.5.mod (nostruct-align/1cwvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.512863
/projects/compbio/experiments/models.97/pdb/1e/1ej6D/nostruct-align/1ej6D.t2k-w0.5.mod(21):  Reading nostruct-align/1ej6D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-22974/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej6D/nostruct-align/1ej6D.t2k-w0.5.mod (nostruct-align/1ej6D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej6D/nostruct-align/1ej6D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.517879
/projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t2k-w0.5.mod(21):  Reading nostruct-align/1qh3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14432/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t2k-w0.5.mod (nostruct-align/1qh3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.329910
/projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t2k-w0.5.mod(22):  Reading nostruct-align/1sfp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9833/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t2k-w0.5.mod (nostruct-align/1sfp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.283871
/projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-w0.5.mod(22):  Reading nostruct-align/1cc8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-12012/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-w0.5.mod (nostruct-align/1cc8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.903904
/projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t2k-w0.5.mod(21):  Reading nostruct-align/1sh1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-9933/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t2k-w0.5.mod (nostruct-align/1sh1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.058887
/projects/compbio/experiments/models.97/pdb/1a/1apxA/nostruct-align/1apxA.t2k-w0.5.mod(21):  Reading nostruct-align/1apxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-11343/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apxA/nostruct-align/1apxA.t2k-w0.5.mod (nostruct-align/1apxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apxA/nostruct-align/1apxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.765894
/projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t2k-w0.5.mod(21):  Reading nostruct-align/1epaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-11443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t2k-w0.5.mod (nostruct-align/1epaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.589907
/projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-w0.5.mod(22):  Reading nostruct-align/3ezmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27782/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-w0.5.mod (nostruct-align/3ezmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.941853
/projects/compbio/experiments/models.97/pdb/2p/2pabA/nostruct-align/2pabA.t2k-w0.5.mod(21):  Reading nostruct-align/2pabA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27484/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pabA/nostruct-align/2pabA.t2k-w0.5.mod (nostruct-align/2pabA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pabA/nostruct-align/2pabA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.424892
/projects/compbio/experiments/models.97/pdb/1h/1hzoA/nostruct-align/1hzoA.t2k-w0.5.mod(22):  Reading nostruct-align/1hzoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13117/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzoA/nostruct-align/1hzoA.t2k-w0.5.mod (nostruct-align/1hzoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hzoA/nostruct-align/1hzoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.870909
/projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-w0.5.mod(22):  Reading nostruct-align/3bamA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-10340/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-w0.5.mod (nostruct-align/3bamA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3b/3bamA/nostruct-align/3bamA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.009905
/projects/compbio/experiments/models.97/pdb/1e/1ewkA/nostruct-align/1ewkA.t2k-w0.5.mod(22):  Reading nostruct-align/1ewkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-11985/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewkA/nostruct-align/1ewkA.t2k-w0.5.mod (nostruct-align/1ewkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewkA/nostruct-align/1ewkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.988859
/projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t2k-w0.5.mod(21):  Reading nostruct-align/3bamB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-18314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t2k-w0.5.mod (nostruct-align/3bamB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.054903
/projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t2k-w0.5.mod(21):  Reading nostruct-align/1dts.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-28120/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t2k-w0.5.mod (nostruct-align/1dts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.363855
/projects/compbio/experiments/models.97/pdb/1w/1wetA/nostruct-align/1wetA.t2k-w0.5.mod(21):  Reading nostruct-align/1wetA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-21668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wetA/nostruct-align/1wetA.t2k-w0.5.mod (nostruct-align/1wetA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wetA/nostruct-align/1wetA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.126863
/projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t2k-w0.5.mod(21):  Reading nostruct-align/2phlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-9866/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t2k-w0.5.mod (nostruct-align/2phlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.519907
/projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-w0.5.mod(22):  Reading nostruct-align/1pcfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-14684/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-w0.5.mod (nostruct-align/1pcfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.665867
/projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t2k-w0.5.mod(21):  Reading nostruct-align/1sgc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-17257/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t2k-w0.5.mod (nostruct-align/1sgc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.926888
/projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t2k-w0.5.mod(21):  Reading nostruct-align/1dtx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-28987/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t2k-w0.5.mod (nostruct-align/1dtx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.383894
/projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t2k-w0.5.mod(21):  Reading nostruct-align/1dn1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-25253/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t2k-w0.5.mod (nostruct-align/1dn1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.809885
/projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t2k-w0.5.mod(21):  Reading nostruct-align/1dn1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1025/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t2k-w0.5.mod (nostruct-align/1dn1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.706873
/projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t2k-w0.5.mod(22):  Reading nostruct-align/1smtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12974/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t2k-w0.5.mod (nostruct-align/1smtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.254889
/projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t2k-w0.5.mod(21):  Reading nostruct-align/2omf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-26906/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t2k-w0.5.mod (nostruct-align/2omf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.353853
/projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t2k-w0.5.mod(21):  Reading nostruct-align/1smtB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-12348/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t2k-w0.5.mod (nostruct-align/1smtB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.356852
/projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t2k-w0.5.mod(22):  Reading nostruct-align/1lkfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-855/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t2k-w0.5.mod (nostruct-align/1lkfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.294870
/projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t2k-w0.5.mod(21):  Reading nostruct-align/1ehyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-15663/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t2k-w0.5.mod (nostruct-align/1ehyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.453859
/projects/compbio/experiments/models.97/pdb/1i/1ihbA/nostruct-align/1ihbA.t2k-w0.5.mod(22):  Reading nostruct-align/1ihbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-19898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihbA/nostruct-align/1ihbA.t2k-w0.5.mod (nostruct-align/1ihbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihbA/nostruct-align/1ihbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.139887
/projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-w0.5.mod(22):  Reading nostruct-align/1cy5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-16461/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-w0.5.mod (nostruct-align/1cy5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.609892
/projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t2k-w0.5.mod(22):  Reading nostruct-align/1qh4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-13058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t2k-w0.5.mod (nostruct-align/1qh4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.651850
/projects/compbio/experiments/models.97/pdb/1j/1jdhA/nostruct-align/1jdhA.t2k-w0.5.mod(22):  Reading nostruct-align/1jdhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-7005/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdhA/nostruct-align/1jdhA.t2k-w0.5.mod (nostruct-align/1jdhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdhA/nostruct-align/1jdhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.672903
/projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t2k-w0.5.mod(21):  Reading nostruct-align/1b2sD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13465/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t2k-w0.5.mod (nostruct-align/1b2sD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.124870
/projects/compbio/experiments/models.97/pdb/1j/1jdhB/nostruct-align/1jdhB.t2k-w0.5.mod(22):  Reading nostruct-align/1jdhB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdhB/nostruct-align/1jdhB.t2k-w0.5.mod (nostruct-align/1jdhB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdhB/nostruct-align/1jdhB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.936899
/projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t2k-w0.5.mod(21):  Reading nostruct-align/1apyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-21775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t2k-w0.5.mod (nostruct-align/1apyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.848869
/projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t2k-w0.5.mod(21):  Reading nostruct-align/1sgt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-13064/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t2k-w0.5.mod (nostruct-align/1sgt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.827873
/projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t2k-w0.5.mod(21):  Reading nostruct-align/1apyB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-26027/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t2k-w0.5.mod (nostruct-align/1apyB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.876904
/projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t2k-w0.5.mod(21):  Reading nostruct-align/1epbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-12567/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t2k-w0.5.mod (nostruct-align/1epbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.842880
/projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k-w0.5.mod(22):  Reading nostruct-align/1jm0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-9199/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k-w0.5.mod (nostruct-align/1jm0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jm0A/nostruct-align/1jm0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.867872
/projects/compbio/experiments/models.97/pdb/1f/1f9fA/nostruct-align/1f9fA.t2k-w0.5.mod(21):  Reading nostruct-align/1f9fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18377/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9fA/nostruct-align/1f9fA.t2k-w0.5.mod (nostruct-align/1f9fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f9fA/nostruct-align/1f9fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.821869
/projects/compbio/experiments/models.97/pdb/1h/1hzpA/nostruct-align/1hzpA.t2k-w0.5.mod(21):  Reading nostruct-align/1hzpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-25109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzpA/nostruct-align/1hzpA.t2k-w0.5.mod (nostruct-align/1hzpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hzpA/nostruct-align/1hzpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.742857
/projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t2k-w0.5.mod(21):  Reading nostruct-align/1dun.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28593/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t2k-w0.5.mod (nostruct-align/1dun.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.624870
/projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t2k-w0.5.mod(21):  Reading nostruct-align/1bev1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-23565/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t2k-w0.5.mod (nostruct-align/1bev1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.373886
/projects/compbio/experiments/models.97/pdb/1k/1k4vA/nostruct-align/1k4vA.t2k-w0.5.mod(22):  Reading nostruct-align/1k4vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-12896/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4vA/nostruct-align/1k4vA.t2k-w0.5.mod (nostruct-align/1k4vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k4vA/nostruct-align/1k4vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.281887
/projects/compbio/experiments/models.97/pdb/1h/1hf2A/nostruct-align/1hf2A.t2k-w0.5.mod(22):  Reading nostruct-align/1hf2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-11893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hf2A/nostruct-align/1hf2A.t2k-w0.5.mod (nostruct-align/1hf2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hf2A/nostruct-align/1hf2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.563875
/projects/compbio/experiments/models.97/pdb/1g/1gadO/nostruct-align/1gadO.t2k-w0.5.mod(21):  Reading nostruct-align/1gadO.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-25950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gadO/nostruct-align/1gadO.t2k-w0.5.mod (nostruct-align/1gadO.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gadO/nostruct-align/1gadO.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.216854
/projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t2k-w0.5.mod(21):  Reading nostruct-align/1bev4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-27597/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t2k-w0.5.mod (nostruct-align/1bev4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.036860
/projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t2k-w0.5.mod(21):  Reading nostruct-align/1shg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-3475/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t2k-w0.5.mod (nostruct-align/1shg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.344854
/projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t2k-w0.5.mod(21):  Reading nostruct-align/1f3z.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-10638/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t2k-w0.5.mod (nostruct-align/1f3z.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.757862
/projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ej8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-19310/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k-w0.5.mod (nostruct-align/1ej8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.864882
/projects/compbio/experiments/models.97/pdb/1e/1e5xA/nostruct-align/1e5xA.t2k-w0.5.mod(22):  Reading nostruct-align/1e5xA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-2571/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e5xA/nostruct-align/1e5xA.t2k-w0.5.mod (nostruct-align/1e5xA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e5xA/nostruct-align/1e5xA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.792885
/projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t2k-w0.5.mod(21):  Reading nostruct-align/1cwxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-28388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t2k-w0.5.mod (nostruct-align/1cwxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.547878
/projects/compbio/experiments/models.97/pdb/1i/1ihcA/nostruct-align/1ihcA.t2k-w0.5.mod(21):  Reading nostruct-align/1ihcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-1361/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihcA/nostruct-align/1ihcA.t2k-w0.5.mod (nostruct-align/1ihcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihcA/nostruct-align/1ihcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.570910
/projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t2k-w0.5.mod(21):  Reading nostruct-align/1aipE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-14521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t2k-w0.5.mod (nostruct-align/1aipE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.028894
/projects/compbio/experiments/models.97/pdb/1k/1kvkA/nostruct-align/1kvkA.t2k-w0.5.mod(22):  Reading nostruct-align/1kvkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-14175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvkA/nostruct-align/1kvkA.t2k-w0.5.mod (nostruct-align/1kvkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kvkA/nostruct-align/1kvkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.563890
/projects/compbio/experiments/models.97/pdb/1b/1b2tA/nostruct-align/1b2tA.t2k-w0.5.mod(21):  Reading nostruct-align/1b2tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-18755/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2tA/nostruct-align/1b2tA.t2k-w0.5.mod (nostruct-align/1b2tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b2tA/nostruct-align/1b2tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.675903
/projects/compbio/experiments/models.97/pdb/1s/1shp/nostruct-align/1shp.t2k-w0.5.mod(21):  Reading nostruct-align/1shp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1shp/nostruct-align/1shp.t2k-w0.5.mod (nostruct-align/1shp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1shp/nostruct-align/1shp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.449883
/projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-w0.5.mod(22):  Reading nostruct-align/1qh5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-17061/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-w0.5.mod (nostruct-align/1qh5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.841850
/projects/compbio/experiments/models.97/pdb/1j/1jdiA/nostruct-align/1jdiA.t2k-w0.5.mod(22):  Reading nostruct-align/1jdiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-6193/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdiA/nostruct-align/1jdiA.t2k-w0.5.mod (nostruct-align/1jdiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdiA/nostruct-align/1jdiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.541851
/projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t2k-w0.5.mod(21):  Reading nostruct-align/1dvh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31940/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t2k-w0.5.mod (nostruct-align/1dvh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.832890
/projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t2k-w0.5.mod(21):  Reading nostruct-align/1zrn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-22441/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t2k-w0.5.mod (nostruct-align/1zrn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.021883
/projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t2k-w0.5.mod(21):  Reading nostruct-align/1fliA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-14443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t2k-w0.5.mod (nostruct-align/1fliA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.990868
/projects/compbio/experiments/models.97/pdb/1j/1jksA/nostruct-align/1jksA.t2k-w0.5.mod(22):  Reading nostruct-align/1jksA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-30382/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jksA/nostruct-align/1jksA.t2k-w0.5.mod (nostruct-align/1jksA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jksA/nostruct-align/1jksA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.179859
/projects/compbio/experiments/models.97/pdb/1k/1k4wA/nostruct-align/1k4wA.t2k-w0.5.mod(22):  Reading nostruct-align/1k4wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-4421/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4wA/nostruct-align/1k4wA.t2k-w0.5.mod (nostruct-align/1k4wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k4wA/nostruct-align/1k4wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.490860
/projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t2k-w0.5.mod(22):  Reading nostruct-align/1dekA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-13574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t2k-w0.5.mod (nostruct-align/1dekA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.425890
/projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t2k-w0.5.mod(22):  Reading nostruct-align/1d2iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-32005/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t2k-w0.5.mod (nostruct-align/1d2iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.519876
/projects/compbio/experiments/models.97/pdb/1f/1fu1A/nostruct-align/1fu1A.t2k-w0.5.mod(22):  Reading nostruct-align/1fu1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-21570/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fu1A/nostruct-align/1fu1A.t2k-w0.5.mod (nostruct-align/1fu1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fu1A/nostruct-align/1fu1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.000875
/projects/compbio/experiments/models.97/pdb/1f/1fu1B/nostruct-align/1fu1B.t2k-w0.5.mod(22):  Reading nostruct-align/1fu1B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-22204/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fu1B/nostruct-align/1fu1B.t2k-w0.5.mod (nostruct-align/1fu1B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fu1B/nostruct-align/1fu1B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.702900
/projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t2k-w0.5.mod(22):  Reading nostruct-align/1sig.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-25327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t2k-w0.5.mod (nostruct-align/1sig.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.877871
/projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t2k-w0.5.mod(21):  Reading nostruct-align/2napA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-21763/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t2k-w0.5.mod (nostruct-align/2napA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.892874
/projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t2k-w0.5.mod(21):  Reading nostruct-align/1smvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21111/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t2k-w0.5.mod (nostruct-align/1smvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.079887
/projects/compbio/experiments/models.97/pdb/1c/1cwyA/nostruct-align/1cwyA.t2k-w0.5.mod(21):  Reading nostruct-align/1cwyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-31292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cwyA/nostruct-align/1cwyA.t2k-w0.5.mod (nostruct-align/1cwyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cwyA/nostruct-align/1cwyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.660852
/projects/compbio/experiments/models.97/pdb/1b/1b43A/nostruct-align/1b43A.t2k-w0.5.mod(22):  Reading nostruct-align/1b43A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b43A/nostruct-align/1b43A.t2k-w0.5.mod (nostruct-align/1b43A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b43A/nostruct-align/1b43A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.717896
/projects/compbio/experiments/models.97/pdb/1k/1kvlA/nostruct-align/1kvlA.t2k-w0.5.mod(22):  Reading nostruct-align/1kvlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-23538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvlA/nostruct-align/1kvlA.t2k-w0.5.mod (nostruct-align/1kvlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kvlA/nostruct-align/1kvlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.923868
/projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t2k-w0.5.mod(22):  Reading nostruct-align/2mltA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19544/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t2k-w0.5.mod (nostruct-align/2mltA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.540871
/projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t2k-w0.5.mod(21):  Reading nostruct-align/1qfxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t2k-w0.5.mod (nostruct-align/1qfxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.834896
/projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t2k-w0.5.mod(21):  Reading nostruct-align/1sis.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-14443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t2k-w0.5.mod (nostruct-align/1sis.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.095858
/projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t2k-w0.5.mod(21):  Reading nostruct-align/1tbrR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-24604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t2k-w0.5.mod (nostruct-align/1tbrR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.904873
/projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-w0.5.mod(22):  Reading nostruct-align/1qnaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2752/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-w0.5.mod (nostruct-align/1qnaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.480873
/projects/compbio/experiments/models.97/pdb/1f/1fljA/nostruct-align/1fljA.t2k-w0.5.mod(21):  Reading nostruct-align/1fljA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30365/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fljA/nostruct-align/1fljA.t2k-w0.5.mod (nostruct-align/1fljA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fljA/nostruct-align/1fljA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.635895
/projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-w0.5.mod(22):  Reading nostruct-align/1j8rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-7804/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-w0.5.mod (nostruct-align/1j8rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j8rA/nostruct-align/1j8rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.136902
/projects/compbio/experiments/models.97/pdb/1a/1axdA/nostruct-align/1axdA.t2k-w0.5.mod(21):  Reading nostruct-align/1axdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-3868/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axdA/nostruct-align/1axdA.t2k-w0.5.mod (nostruct-align/1axdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1axdA/nostruct-align/1axdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.927872
/projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k-w0.5.mod(21):  Reading nostruct-align/1ghpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-24893/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k-w0.5.mod (nostruct-align/1ghpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ghpA/nostruct-align/1ghpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.434868
/projects/compbio/experiments/models.97/pdb/1e/1ewnA/nostruct-align/1ewnA.t2k-w0.5.mod(22):  Reading nostruct-align/1ewnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-32214/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewnA/nostruct-align/1ewnA.t2k-w0.5.mod (nostruct-align/1ewnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewnA/nostruct-align/1ewnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.529865
/projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t2k-w0.5.mod(21):  Reading nostruct-align/1delA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-9722/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t2k-w0.5.mod (nostruct-align/1delA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.393871
/projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-w0.5.mod(22):  Reading nostruct-align/1earA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-7275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-w0.5.mod (nostruct-align/1earA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1earA/nostruct-align/1earA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.251854
/projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t2k-w0.5.mod(21):  Reading nostruct-align/2hfh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22403/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t2k-w0.5.mod (nostruct-align/2hfh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.015860
/projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-w0.5.mod(22):  Reading nostruct-align/1gq8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-18519/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-w0.5.mod (nostruct-align/1gq8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gq8A/nostruct-align/1gq8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.926878
/projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t2k-w0.5.mod(21):  Reading nostruct-align/1zpdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-23904/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t2k-w0.5.mod (nostruct-align/1zpdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.622879
/projects/compbio/experiments/models.97/pdb/1d/1d9tA/nostruct-align/1d9tA.t2k-w0.5.mod(22):  Reading nostruct-align/1d9tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-7872/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d9tA/nostruct-align/1d9tA.t2k-w0.5.mod (nostruct-align/1d9tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d9tA/nostruct-align/1d9tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.624865
/projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-w0.5.mod(22):  Reading nostruct-align/1jzgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-16811/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-w0.5.mod (nostruct-align/1jzgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jzgA/nostruct-align/1jzgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.019894
/projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-w0.5.mod(22):  Reading nostruct-align/2hft.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-29287/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-w0.5.mod (nostruct-align/2hft.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.677851
/projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t2k-w0.5.mod(21):  Reading nostruct-align/1b2vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-19416/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t2k-w0.5.mod (nostruct-align/1b2vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.432903
/projects/compbio/experiments/models.97/pdb/1q/1qh7A/nostruct-align/1qh7A.t2k-w0.5.mod(22):  Reading nostruct-align/1qh7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-17462/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh7A/nostruct-align/1qh7A.t2k-w0.5.mod (nostruct-align/1qh7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qh7A/nostruct-align/1qh7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.305868
/projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t2k-w0.5.mod(22):  Reading nostruct-align/1zto.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-20869/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t2k-w0.5.mod (nostruct-align/1zto.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.972851
/projects/compbio/experiments/models.97/pdb/3p/3pflA/nostruct-align/3pflA.t2k-w0.5.mod(22):  Reading nostruct-align/3pflA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11988/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pflA/nostruct-align/3pflA.t2k-w0.5.mod (nostruct-align/3pflA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pflA/nostruct-align/3pflA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.269880
/projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t2k-w0.5.mod(21):  Reading nostruct-align/1lab.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-22619/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t2k-w0.5.mod (nostruct-align/1lab.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.764891
/projects/compbio/experiments/models.97/pdb/1y/1ylvA/nostruct-align/1ylvA.t2k-w0.5.mod(21):  Reading nostruct-align/1ylvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ylvA/nostruct-align/1ylvA.t2k-w0.5.mod (nostruct-align/1ylvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ylvA/nostruct-align/1ylvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.890905
/projects/compbio/experiments/models.97/pdb/3k/3kvt/nostruct-align/3kvt.t2k-w0.5.mod(22):  Reading nostruct-align/3kvt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-15407/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3k/3kvt/nostruct-align/3kvt.t2k-w0.5.mod (nostruct-align/3kvt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3k/3kvt/nostruct-align/3kvt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.963863
/projects/compbio/experiments/models.97/pdb/1g/1ghqB/nostruct-align/1ghqB.t2k-w0.5.mod(22):  Reading nostruct-align/1ghqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-19333/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghqB/nostruct-align/1ghqB.t2k-w0.5.mod (nostruct-align/1ghqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ghqB/nostruct-align/1ghqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.290888
/projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t2k-w0.5.mod(21):  Reading nostruct-align/1ivyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-20544/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t2k-w0.5.mod (nostruct-align/1ivyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.148861
/projects/compbio/experiments/models.97/pdb/1d/1d2kA/nostruct-align/1d2kA.t2k-w0.5.mod(21):  Reading nostruct-align/1d2kA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-15707/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2kA/nostruct-align/1d2kA.t2k-w0.5.mod (nostruct-align/1d2kA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2kA/nostruct-align/1d2kA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.219898
/projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-w0.5.mod(22):  Reading nostruct-align/1btkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-28154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-w0.5.mod (nostruct-align/1btkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.321878
/projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t2k-w0.5.mod(21):  Reading nostruct-align/1btkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-25467/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t2k-w0.5.mod (nostruct-align/1btkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.527889
/projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t2k-w0.5.mod(21):  Reading nostruct-align/2hgf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-30438/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t2k-w0.5.mod (nostruct-align/2hgf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.335896
/projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-w0.5.mod(22):  Reading nostruct-align/1lam.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12195/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-w0.5.mod (nostruct-align/1lam.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.655893
/projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t2k-w0.5.mod(21):  Reading nostruct-align/1skf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23318/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t2k-w0.5.mod (nostruct-align/1skf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.109879
/projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t2k-w0.5.mod(21):  Reading nostruct-align/1dxy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-27005/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t2k-w0.5.mod (nostruct-align/1dxy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.263893
/projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-w0.5.mod(22):  Reading nostruct-align/1dlwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12818/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-w0.5.mod (nostruct-align/1dlwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dlwA/nostruct-align/1dlwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.120886
/projects/compbio/experiments/models.97/pdb/1l/1lap/nostruct-align/1lap.t2k-w0.5.mod(21):  Reading nostruct-align/1lap.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-22650/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lap/nostruct-align/1lap.t2k-w0.5.mod (nostruct-align/1lap.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lap/nostruct-align/1lap.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.814892
/projects/compbio/experiments/models.97/pdb/1a/1aisA/nostruct-align/1aisA.t2k-w0.5.mod(21):  Reading nostruct-align/1aisA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-18148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aisA/nostruct-align/1aisA.t2k-w0.5.mod (nostruct-align/1aisA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aisA/nostruct-align/1aisA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.591856
/projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t2k-w0.5.mod(22):  Reading nostruct-align/1aisB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-32701/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t2k-w0.5.mod (nostruct-align/1aisB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.776867
/projects/compbio/experiments/models.97/pdb/1e/1e79A/nostruct-align/1e79A.t2k-w0.5.mod(21):  Reading nostruct-align/1e79A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-30540/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79A/nostruct-align/1e79A.t2k-w0.5.mod (nostruct-align/1e79A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e79A/nostruct-align/1e79A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.735903
/projects/compbio/experiments/models.97/pdb/1c/1cy9A/nostruct-align/1cy9A.t2k-w0.5.mod(22):  Reading nostruct-align/1cy9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-22891/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cy9A/nostruct-align/1cy9A.t2k-w0.5.mod (nostruct-align/1cy9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cy9A/nostruct-align/1cy9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.035856
/projects/compbio/experiments/models.97/pdb/1i/1ihfA/nostruct-align/1ihfA.t2k-w0.5.mod(21):  Reading nostruct-align/1ihfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-11297/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihfA/nostruct-align/1ihfA.t2k-w0.5.mod (nostruct-align/1ihfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihfA/nostruct-align/1ihfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.571888
/projects/compbio/experiments/models.97/pdb/1i/1ihfB/nostruct-align/1ihfB.t2k-w0.5.mod(22):  Reading nostruct-align/1ihfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22015/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihfB/nostruct-align/1ihfB.t2k-w0.5.mod (nostruct-align/1ihfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihfB/nostruct-align/1ihfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.704884
/projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t2k-w0.5.mod(22):  Reading nostruct-align/1qh8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-13908/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t2k-w0.5.mod (nostruct-align/1qh8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.991875
/projects/compbio/experiments/models.97/pdb/1e/1e79D/nostruct-align/1e79D.t2k-w0.5.mod(22):  Reading nostruct-align/1e79D.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29739/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79D/nostruct-align/1e79D.t2k-w0.5.mod (nostruct-align/1e79D.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e79D/nostruct-align/1e79D.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.063910
/projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t2k-w0.5.mod(21):  Reading nostruct-align/1lay.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-20257/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t2k-w0.5.mod (nostruct-align/1lay.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.996870
/projects/compbio/experiments/models.97/pdb/1j/1jdlA/nostruct-align/1jdlA.t2k-w0.5.mod(22):  Reading nostruct-align/1jdlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21903/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdlA/nostruct-align/1jdlA.t2k-w0.5.mod (nostruct-align/1jdlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdlA/nostruct-align/1jdlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.217875
/projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t2k-w0.5.mod(21):  Reading nostruct-align/1zug.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-29385/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t2k-w0.5.mod (nostruct-align/1zug.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.331900
/projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t2k-w0.5.mod(22):  Reading nostruct-align/1qh8B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-4820/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t2k-w0.5.mod (nostruct-align/1qh8B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.960859
/projects/compbio/experiments/models.97/pdb/1e/1e79G/nostruct-align/1e79G.t2k-w0.5.mod(22):  Reading nostruct-align/1e79G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8919/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79G/nostruct-align/1e79G.t2k-w0.5.mod (nostruct-align/1e79G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e79G/nostruct-align/1e79G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.210880
/projects/compbio/experiments/models.97/pdb/1e/1e79H/nostruct-align/1e79H.t2k-w0.5.mod(22):  Reading nostruct-align/1e79H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-17171/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79H/nostruct-align/1e79H.t2k-w0.5.mod (nostruct-align/1e79H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e79H/nostruct-align/1e79H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.064898
/projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k-w0.5.mod(22):  Reading nostruct-align/1kb0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-10307/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k-w0.5.mod (nostruct-align/1kb0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kb0A/nostruct-align/1kb0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.584900
/projects/compbio/experiments/models.97/pdb/1e/1epfA/nostruct-align/1epfA.t2k-w0.5.mod(22):  Reading nostruct-align/1epfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23677/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epfA/nostruct-align/1epfA.t2k-w0.5.mod (nostruct-align/1epfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1epfA/nostruct-align/1epfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -34.992886
/projects/compbio/experiments/models.97/pdb/1e/1e79I/nostruct-align/1e79I.t2k-w0.5.mod(21):  Reading nostruct-align/1e79I.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-10357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e79I/nostruct-align/1e79I.t2k-w0.5.mod (nostruct-align/1e79I.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e79I/nostruct-align/1e79I.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.216888
/projects/compbio/experiments/models.97/pdb/1b/1bmbA/nostruct-align/1bmbA.t2k-w0.5.mod(21):  Reading nostruct-align/1bmbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-21322/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmbA/nostruct-align/1bmbA.t2k-w0.5.mod (nostruct-align/1bmbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmbA/nostruct-align/1bmbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.568861
/projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t2k-w0.5.mod(22):  Reading nostruct-align/1lba.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4302/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t2k-w0.5.mod (nostruct-align/1lba.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.845901
/projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t2k-w0.5.mod(21):  Reading nostruct-align/1skz.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-1250/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t2k-w0.5.mod (nostruct-align/1skz.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.729862
/projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-w0.5.mod(22):  Reading nostruct-align/1hztA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28458/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-w0.5.mod (nostruct-align/1hztA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hztA/nostruct-align/1hztA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.298862
/projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t2k-w0.5.mod(21):  Reading nostruct-align/1lbd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-19936/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t2k-w0.5.mod (nostruct-align/1lbd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.590851
/projects/compbio/experiments/models.97/pdb/1k/1k4zA/nostruct-align/1k4zA.t2k-w0.5.mod(22):  Reading nostruct-align/1k4zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-12459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k4zA/nostruct-align/1k4zA.t2k-w0.5.mod (nostruct-align/1k4zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k4zA/nostruct-align/1k4zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.947876
/projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t2k-w0.5.mod(21):  Reading nostruct-align/1dyr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-2426/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t2k-w0.5.mod (nostruct-align/1dyr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.323910
/projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t2k-w0.5.mod(21):  Reading nostruct-align/2ligA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-32433/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t2k-w0.5.mod (nostruct-align/2ligA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.427900
/projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t2k-w0.5.mod(22):  Reading nostruct-align/1qumA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-2224/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t2k-w0.5.mod (nostruct-align/1qumA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.527885
/projects/compbio/experiments/models.97/pdb/1c/1cr0A/nostruct-align/1cr0A.t2k-w0.5.mod(21):  Reading 1cr0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-13715/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr0A/nostruct-align/1cr0A.t2k-w0.5.mod (1cr0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cr0A/nostruct-align/1cr0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.172853
/projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t2k-w0.5.mod(21):  Reading nostruct-align/1dlxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-16939/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t2k-w0.5.mod (nostruct-align/1dlxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.775869
/projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t2k-w0.5.mod(21):  Reading nostruct-align/3dni.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21366/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t2k-w0.5.mod (nostruct-align/3dni.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.112890
/projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-w0.5.mod(22):  Reading nostruct-align/1lkkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9166/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-w0.5.mod (nostruct-align/1lkkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.295862
/projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-w0.5.mod(22):  Reading nostruct-align/1lbu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-32624/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-w0.5.mod (nostruct-align/1lbu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.258875
/projects/compbio/experiments/models.97/pdb/1i/1ihgA/nostruct-align/1ihgA.t2k-w0.5.mod(21):  Reading nostruct-align/1ihgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-22046/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihgA/nostruct-align/1ihgA.t2k-w0.5.mod (nostruct-align/1ihgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihgA/nostruct-align/1ihgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.621902
/projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t2k-w0.5.mod(21):  Reading nostruct-align/1bg8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t2k-w0.5.mod (nostruct-align/1bg8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.680887
/projects/compbio/experiments/models.97/pdb/1k/1kvoA/nostruct-align/1kvoA.t2k-w0.5.mod(22):  Reading nostruct-align/1kvoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-15378/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kvoA/nostruct-align/1kvoA.t2k-w0.5.mod (nostruct-align/1kvoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kvoA/nostruct-align/1kvoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.278875
/projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k-w0.5.mod(21):  Reading nostruct-align/1fecA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27083/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k-w0.5.mod (nostruct-align/1fecA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fecA/nostruct-align/1fecA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.099897
/projects/compbio/experiments/models.97/pdb/1f/1f2aA/nostruct-align/1f2aA.t2k-w0.5.mod(21):  Reading nostruct-align/1f2aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-5402/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2aA/nostruct-align/1f2aA.t2k-w0.5.mod (nostruct-align/1f2aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2aA/nostruct-align/1f2aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.706858
/projects/compbio/experiments/models.97/pdb/1h/1hskA/nostruct-align/1hskA.t2k-w0.5.mod(22):  Reading nostruct-align/1hskA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-21275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hskA/nostruct-align/1hskA.t2k-w0.5.mod (nostruct-align/1hskA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hskA/nostruct-align/1hskA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.726889
/projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t2k-w0.5.mod(21):  Reading nostruct-align/1lt3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24390/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t2k-w0.5.mod (nostruct-align/1lt3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.819860
/projects/compbio/experiments/models.97/pdb/1q/1qndA/nostruct-align/1qndA.t2k-w0.5.mod(21):  Reading nostruct-align/1qndA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18764/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qndA/nostruct-align/1qndA.t2k-w0.5.mod (nostruct-align/1qndA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qndA/nostruct-align/1qndA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.209883
/projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-w0.5.mod(22):  Reading nostruct-align/1flmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-27648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-w0.5.mod (nostruct-align/1flmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.371895
/projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t2k-w0.5.mod(21):  Reading nostruct-align/1sly.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-30098/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t2k-w0.5.mod (nostruct-align/1sly.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.390854
/projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t2k-w0.5.mod(21):  Reading nostruct-align/3csuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-27201/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t2k-w0.5.mod (nostruct-align/3csuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.460875
/projects/compbio/experiments/models.97/pdb/1g/1ghsA/nostruct-align/1ghsA.t2k-w0.5.mod(22):  Reading nostruct-align/1ghsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1ghsA/nostruct-align/1ghsA.t2k-w0.5.mod (nostruct-align/1ghsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1ghsA/nostruct-align/1ghsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.366901
/projects/compbio/experiments/models.97/pdb/1e/1ewqA/nostruct-align/1ewqA.t2k-w0.5.mod(22):  Reading nostruct-align/1ewqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-2943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewqA/nostruct-align/1ewqA.t2k-w0.5.mod (nostruct-align/1ewqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewqA/nostruct-align/1ewqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.802889
/projects/compbio/experiments/models.97/pdb/1g/1g5qA/nostruct-align/1g5qA.t2k-w0.5.mod(21):  Reading nostruct-align/1g5qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-22390/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5qA/nostruct-align/1g5qA.t2k-w0.5.mod (nostruct-align/1g5qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5qA/nostruct-align/1g5qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.962854
/projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t2k-w0.5.mod(22):  Reading nostruct-align/1deoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-26078/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t2k-w0.5.mod (nostruct-align/1deoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.896887
/projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t2k-w0.5.mod(21):  Reading nostruct-align/1d2mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t2k-w0.5.mod (nostruct-align/1d2mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.969875
/projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t2k-w0.5.mod(21):  Reading nostruct-align/1btmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-31725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t2k-w0.5.mod (nostruct-align/1btmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.373886
/projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t2k-w0.5.mod(21):  Reading nostruct-align/1lci.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15844/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t2k-w0.5.mod (nostruct-align/1lci.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.891893
/projects/compbio/experiments/models.97/pdb/1q/1qunB/nostruct-align/1qunB.t2k-w0.5.mod(22):  Reading nostruct-align/1qunB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-11968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qunB/nostruct-align/1qunB.t2k-w0.5.mod (nostruct-align/1qunB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qunB/nostruct-align/1qunB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.705904
/projects/compbio/experiments/models.97/pdb/1e/1e01A/nostruct-align/1e01A.t2k-w0.5.mod(21):  Reading nostruct-align/1e01A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-18642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e01A/nostruct-align/1e01A.t2k-w0.5.mod (nostruct-align/1e01A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e01A/nostruct-align/1e01A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.799885
/projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t2k-w0.5.mod(21):  Reading nostruct-align/1cr1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1298/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t2k-w0.5.mod (nostruct-align/1cr1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.722895
/projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t2k-w0.5.mod(21):  Reading nostruct-align/1lcl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-19725/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t2k-w0.5.mod (nostruct-align/1lcl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.075893
/projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t2k-w0.5.mod(22):  Reading nostruct-align/1smd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-21526/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t2k-w0.5.mod (nostruct-align/1smd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.756878
/projects/compbio/experiments/models.97/pdb/1d/1dlyA/nostruct-align/1dlyA.t2k-w0.5.mod(21):  Reading nostruct-align/1dlyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4303/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dlyA/nostruct-align/1dlyA.t2k-w0.5.mod (nostruct-align/1dlyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dlyA/nostruct-align/1dlyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.395905
/projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t2k-w0.5.mod(21):  Reading nostruct-align/1zwa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t2k-w0.5.mod (nostruct-align/1zwa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.694889
/projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t2k-w0.5.mod(21):  Reading nostruct-align/1a81A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-1631/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t2k-w0.5.mod (nostruct-align/1a81A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.170864
/projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t2k-w0.5.mod(21):  Reading nostruct-align/1lct.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31928/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t2k-w0.5.mod (nostruct-align/1lct.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.107857
/projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t2k-w0.5.mod(21):  Reading nostruct-align/1le4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-29215/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t2k-w0.5.mod (nostruct-align/1le4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.695892
/projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t2k-w0.5.mod(21):  Reading nostruct-align/1b47A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t2k-w0.5.mod (nostruct-align/1b47A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.086868
/projects/compbio/experiments/models.97/pdb/1g/1gajA/nostruct-align/1gajA.t2k-w0.5.mod(21):  Reading nostruct-align/1gajA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-30361/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gajA/nostruct-align/1gajA.t2k-w0.5.mod (nostruct-align/1gajA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gajA/nostruct-align/1gajA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.794901
/projects/compbio/experiments/models.97/pdb/1i/1iq0A/nostruct-align/1iq0A.t2k-w0.5.mod(22):  Reading nostruct-align/1iq0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-11134/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq0A/nostruct-align/1iq0A.t2k-w0.5.mod (nostruct-align/1iq0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iq0A/nostruct-align/1iq0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.296888
/projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t2k-w0.5.mod(22):  Reading nostruct-align/1bmdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6349/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t2k-w0.5.mod (nostruct-align/1bmdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.725859
/projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t2k-w0.5.mod(22):  Reading nostruct-align/2mtaC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-14180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t2k-w0.5.mod (nostruct-align/2mtaC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.174862
/projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-w0.5.mod(22):  Reading nostruct-align/1jkxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-5583/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-w0.5.mod (nostruct-align/1jkxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jkxA/nostruct-align/1jkxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.161892
/projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t2k-w0.5.mod(21):  Reading nostruct-align/1pyiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-28199/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t2k-w0.5.mod (nostruct-align/1pyiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.420855
/projects/compbio/experiments/models.97/pdb/1g/1g5rA/nostruct-align/1g5rA.t2k-w0.5.mod(22):  Reading nostruct-align/1g5rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19143/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5rA/nostruct-align/1g5rA.t2k-w0.5.mod (nostruct-align/1g5rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5rA/nostruct-align/1g5rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.449905
/projects/compbio/experiments/models.97/pdb/1l/1ldg/nostruct-align/1ldg.t2k-w0.5.mod(22):  Reading nostruct-align/1ldg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldg/nostruct-align/1ldg.t2k-w0.5.mod (nostruct-align/1ldg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ldg/nostruct-align/1ldg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.652899
/projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-w0.5.mod(21):  Reading nostruct-align/1d2nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-20067/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-w0.5.mod (nostruct-align/1d2nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.256859
/projects/compbio/experiments/models.97/pdb/1h/1hf8A/nostruct-align/1hf8A.t2k-w0.5.mod(22):  Reading nostruct-align/1hf8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-5255/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hf8A/nostruct-align/1hf8A.t2k-w0.5.mod (nostruct-align/1hf8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hf8A/nostruct-align/1hf8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.837854
/projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t2k-w0.5.mod(21):  Reading nostruct-align/1snc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-21649/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t2k-w0.5.mod (nostruct-align/1snc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.221876
/projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t2k-w0.5.mod(21):  Reading nostruct-align/1ldl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-2256/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t2k-w0.5.mod (nostruct-align/1ldl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.190887
/projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t2k-w0.5.mod(21):  Reading nostruct-align/1ytbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-24669/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t2k-w0.5.mod (nostruct-align/1ytbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.620892
/projects/compbio/experiments/models.97/pdb/1y/1ytbB/nostruct-align/1ytbB.t2k-w0.5.mod(21):  Reading nostruct-align/1ytbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-4563/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytbB/nostruct-align/1ytbB.t2k-w0.5.mod (nostruct-align/1ytbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytbB/nostruct-align/1ytbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.785887
/projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t2k-w0.5.mod(21):  Reading nostruct-align/1qa1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-3617/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t2k-w0.5.mod (nostruct-align/1qa1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.047871
/projects/compbio/experiments/models.97/pdb/1h/1hlcA/nostruct-align/1hlcA.t2k-w0.5.mod(21):  Reading nostruct-align/1hlcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-29294/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlcA/nostruct-align/1hlcA.t2k-w0.5.mod (nostruct-align/1hlcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hlcA/nostruct-align/1hlcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.904863
/projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t2k-w0.5.mod(21):  Reading nostruct-align/1ldr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-6142/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t2k-w0.5.mod (nostruct-align/1ldr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.127907
/projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t2k-w0.5.mod(21):  Reading nostruct-align/1ak4C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-25810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t2k-w0.5.mod (nostruct-align/1ak4C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.141905
/projects/compbio/experiments/models.97/pdb/1i/1i5gA/nostruct-align/1i5gA.t2k-w0.5.mod(22):  Reading nostruct-align/1i5gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-20619/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5gA/nostruct-align/1i5gA.t2k-w0.5.mod (nostruct-align/1i5gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i5gA/nostruct-align/1i5gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.649878
/projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t2k-w0.5.mod(21):  Reading nostruct-align/2aaa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-5337/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t2k-w0.5.mod (nostruct-align/2aaa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.056911
/projects/compbio/experiments/models.97/pdb/1s/1sp1/nostruct-align/1sp1.t2k-w0.5.mod(21):  Reading nostruct-align/1sp1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-29552/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sp1/nostruct-align/1sp1.t2k-w0.5.mod (nostruct-align/1sp1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sp1/nostruct-align/1sp1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.190901
/projects/compbio/experiments/models.97/pdb/1g/1gakA/nostruct-align/1gakA.t2k-w0.5.mod(22):  Reading nostruct-align/1gakA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-29642/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gakA/nostruct-align/1gakA.t2k-w0.5.mod (nostruct-align/1gakA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gakA/nostruct-align/1gakA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.812868
/projects/compbio/experiments/models.97/pdb/1s/1sp2/nostruct-align/1sp2.t2k-w0.5.mod(21):  Reading nostruct-align/1sp2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-19228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sp2/nostruct-align/1sp2.t2k-w0.5.mod (nostruct-align/1sp2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sp2/nostruct-align/1sp2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.392902
/projects/compbio/experiments/models.97/pdb/1f/1floA/nostruct-align/1floA.t2k-w0.5.mod(22):  Reading nostruct-align/1floA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27643/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1floA/nostruct-align/1floA.t2k-w0.5.mod (nostruct-align/1floA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1floA/nostruct-align/1floA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.014904
/projects/compbio/experiments/models.97/pdb/1f/1f9mA/nostruct-align/1f9mA.t2k-w0.5.mod(21):  Reading nostruct-align/1f9mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-9670/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9mA/nostruct-align/1f9mA.t2k-w0.5.mod (nostruct-align/1f9mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f9mA/nostruct-align/1f9mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.051853
/projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t2k-w0.5.mod(21):  Reading nostruct-align/1lea.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-15902/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t2k-w0.5.mod (nostruct-align/1lea.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.580879
/projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t2k-w0.5.mod(21):  Reading nostruct-align/1zxq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9037/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t2k-w0.5.mod (nostruct-align/1zxq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.713903
/projects/compbio/experiments/models.97/pdb/1j/1j8wB/nostruct-align/1j8wB.t2k-w0.5.mod(22):  Reading nostruct-align/1j8wB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3138/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8wB/nostruct-align/1j8wB.t2k-w0.5.mod (nostruct-align/1j8wB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j8wB/nostruct-align/1j8wB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.722893
/projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t2k-w0.5.mod(21):  Reading nostruct-align/1led.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-26610/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t2k-w0.5.mod (nostruct-align/1led.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.677858
/projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t2k-w0.5.mod(21):  Reading nostruct-align/1axiB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-22691/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t2k-w0.5.mod (nostruct-align/1axiB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -33.775879
/projects/compbio/experiments/models.97/pdb/1e/1ewsA/nostruct-align/1ewsA.t2k-w0.5.mod(21):  Reading nostruct-align/1ewsA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-4814/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewsA/nostruct-align/1ewsA.t2k-w0.5.mod (nostruct-align/1ewsA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewsA/nostruct-align/1ewsA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.886906
/projects/compbio/experiments/models.97/pdb/1g/1g71A/nostruct-align/1g71A.t2k-w0.5.mod(22):  Reading nostruct-align/1g71A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20572/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g71A/nostruct-align/1g71A.t2k-w0.5.mod (nostruct-align/1g71A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g71A/nostruct-align/1g71A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.184881
/projects/compbio/experiments/models.97/pdb/1d/1d2oA/nostruct-align/1d2oA.t2k-w0.5.mod(22):  Reading nostruct-align/1d2oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-26828/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2oA/nostruct-align/1d2oA.t2k-w0.5.mod (nostruct-align/1d2oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2oA/nostruct-align/1d2oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.183884
/projects/compbio/experiments/models.97/pdb/1h/1hf9A/nostruct-align/1hf9A.t2k-w0.5.mod(21):  Reading nostruct-align/1hf9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-27517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hf9A/nostruct-align/1hf9A.t2k-w0.5.mod (nostruct-align/1hf9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hf9A/nostruct-align/1hf9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.977852
/projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t2k-w0.5.mod(22):  Reading nostruct-align/1qupA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-19856/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t2k-w0.5.mod (nostruct-align/1qupA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.420904
/projects/compbio/experiments/models.97/pdb/1a/1abmA/nostruct-align/1abmA.t2k-w0.5.mod(21):  Reading nostruct-align/1abmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-32267/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abmA/nostruct-align/1abmA.t2k-w0.5.mod (nostruct-align/1abmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1abmA/nostruct-align/1abmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.072857
/projects/compbio/experiments/models.97/pdb/1f/1fsyA/nostruct-align/1fsyA.t2k-w0.5.mod(21):  Reading nostruct-align/1fsyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-22968/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fsyA/nostruct-align/1fsyA.t2k-w0.5.mod (nostruct-align/1fsyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fsyA/nostruct-align/1fsyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.807852
/projects/compbio/experiments/models.97/pdb/1e/1ec5A/nostruct-align/1ec5A.t2k-w0.5.mod(22):  Reading nostruct-align/1ec5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-23423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ec5A/nostruct-align/1ec5A.t2k-w0.5.mod (nostruct-align/1ec5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ec5A/nostruct-align/1ec5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.292860
/projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k-w0.5.mod(22):  Reading nostruct-align/2fcbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-3487/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k-w0.5.mod (nostruct-align/2fcbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -36.770908
/projects/compbio/experiments/models.97/pdb/2a/2aat/nostruct-align/2aat.t2k-w0.5.mod(21):  Reading nostruct-align/2aat.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16983/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aat/nostruct-align/2aat.t2k-w0.5.mod (nostruct-align/2aat.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2aat/nostruct-align/2aat.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.130903
/projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t2k-w0.5.mod(22):  Reading nostruct-align/1onrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-18628/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t2k-w0.5.mod (nostruct-align/1onrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.940870
/projects/compbio/experiments/models.97/pdb/1s/1sol/nostruct-align/1sol.t2k-w0.5.mod(21):  Reading nostruct-align/1sol.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-16976/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sol/nostruct-align/1sol.t2k-w0.5.mod (nostruct-align/1sol.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sol/nostruct-align/1sol.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.392881
/projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-w0.5.mod(22):  Reading nostruct-align/1ihjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21965/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-w0.5.mod (nostruct-align/1ihjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihjA/nostruct-align/1ihjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.815866
/projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t2k-w0.5.mod(21):  Reading nostruct-align/1xikA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t2k-w0.5.mod (nostruct-align/1xikA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.349882
/projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-w0.5.mod(22):  Reading nostruct-align/1mgtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26311/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-w0.5.mod (nostruct-align/1mgtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.136860
/projects/compbio/experiments/models.97/pdb/1j/1jdpA/nostruct-align/1jdpA.t2k-w0.5.mod(22):  Reading nostruct-align/1jdpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-19309/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdpA/nostruct-align/1jdpA.t2k-w0.5.mod (nostruct-align/1jdpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdpA/nostruct-align/1jdpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.189877
/projects/compbio/experiments/models.97/pdb/1d/1dtdA/nostruct-align/1dtdA.t2k-w0.5.mod(21):  Reading nostruct-align/1dtdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-15587/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtdA/nostruct-align/1dtdA.t2k-w0.5.mod (nostruct-align/1dtdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtdA/nostruct-align/1dtdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.458853
/projects/compbio/experiments/models.97/pdb/1f/1f2dA/nostruct-align/1f2dA.t2k-w0.5.mod(21):  Reading nostruct-align/1f2dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-19056/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2dA/nostruct-align/1f2dA.t2k-w0.5.mod (nostruct-align/1f2dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2dA/nostruct-align/1f2dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.797855
/projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-w0.5.mod(22):  Reading nostruct-align/1dtdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-w0.5.mod (nostruct-align/1dtdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtdB/nostruct-align/1dtdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.309874
/projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t2k-w0.5.mod(21):  Reading nostruct-align/2abd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-29012/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t2k-w0.5.mod (nostruct-align/2abd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.147852
/projects/compbio/experiments/models.97/pdb/1a/1a6uL/nostruct-align/1a6uL.t2k-w0.5.mod(21):  Reading nostruct-align/1a6uL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-16266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6uL/nostruct-align/1a6uL.t2k-w0.5.mod (nostruct-align/1a6uL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6uL/nostruct-align/1a6uL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.824856
/projects/compbio/experiments/models.97/pdb/1b/1bmfA/nostruct-align/1bmfA.t2k-w0.5.mod(21):  Reading nostruct-align/1bmfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-12927/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmfA/nostruct-align/1bmfA.t2k-w0.5.mod (nostruct-align/1bmfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmfA/nostruct-align/1bmfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.524872
/projects/compbio/experiments/models.97/pdb/8p/8pchA/nostruct-align/8pchA.t2k-w0.5.mod(21):  Reading nostruct-align/8pchA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-7892/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8p/8pchA/nostruct-align/8pchA.t2k-w0.5.mod (nostruct-align/8pchA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8p/8pchA/nostruct-align/8pchA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.333860
/projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t2k-w0.5.mod(22):  Reading nostruct-align/1lfb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-12767/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t2k-w0.5.mod (nostruct-align/1lfb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.887852
/projects/compbio/experiments/models.97/pdb/1h/1hzxA/nostruct-align/1hzxA.t2k-w0.5.mod(22):  Reading nostruct-align/1hzxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-15819/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzxA/nostruct-align/1hzxA.t2k-w0.5.mod (nostruct-align/1hzxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hzxA/nostruct-align/1hzxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -41.262856
/projects/compbio/experiments/models.97/pdb/1l/1lfc/nostruct-align/1lfc.t2k-w0.5.mod(21):  Reading nostruct-align/1lfc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-32006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfc/nostruct-align/1lfc.t2k-w0.5.mod (nostruct-align/1lfc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lfc/nostruct-align/1lfc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.890873
/projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t2k-w0.5.mod(21):  Reading nostruct-align/1bmfG.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-32743/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t2k-w0.5.mod (nostruct-align/1bmfG.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.660873
/projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t2k-w0.5.mod(21):  Reading nostruct-align/2abk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16002/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t2k-w0.5.mod (nostruct-align/2abk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.545910
/projects/compbio/experiments/models.97/pdb/1e/1ey2A/nostruct-align/1ey2A.t2k-w0.5.mod(22):  Reading nostruct-align/1ey2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3563/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ey2A/nostruct-align/1ey2A.t2k-w0.5.mod (nostruct-align/1ey2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ey2A/nostruct-align/1ey2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.798885
/projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-w0.5.mod(22):  Reading nostruct-align/1g5tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12197/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-w0.5.mod (nostruct-align/1g5tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5tA/nostruct-align/1g5tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.461872
/projects/compbio/experiments/models.97/pdb/1g/1g72A/nostruct-align/1g72A.t2k-w0.5.mod(22):  Reading nostruct-align/1g72A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18906/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g72A/nostruct-align/1g72A.t2k-w0.5.mod (nostruct-align/1g72A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g72A/nostruct-align/1g72A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.456903
/projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t2k-w0.5.mod(21):  Reading nostruct-align/4hb1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-7039/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t2k-w0.5.mod (nostruct-align/4hb1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.357882
/projects/compbio/experiments/models.97/pdb/1v/1viwB/nostruct-align/1viwB.t2k-w0.5.mod(21):  Reading nostruct-align/1viwB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-13285/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1viwB/nostruct-align/1viwB.t2k-w0.5.mod (nostruct-align/1viwB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1viwB/nostruct-align/1viwB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.703869
/projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t2k-w0.5.mod(22):  Reading nostruct-align/1derA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-32141/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t2k-w0.5.mod (nostruct-align/1derA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.389885
/projects/compbio/experiments/models.97/pdb/1g/1g72B/nostruct-align/1g72B.t2k-w0.5.mod(22):  Reading nostruct-align/1g72B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-24148/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g72B/nostruct-align/1g72B.t2k-w0.5.mod (nostruct-align/1g72B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g72B/nostruct-align/1g72B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.303862
/projects/compbio/experiments/models.97/pdb/3z/3znf/nostruct-align/3znf.t2k-w0.5.mod(21):  Reading nostruct-align/3znf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-28167/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3z/3znf/nostruct-align/3znf.t2k-w0.5.mod (nostruct-align/3znf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3z/3znf/nostruct-align/3znf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.513874
/projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t2k-w0.5.mod(21):  Reading nostruct-align/1spa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-528/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t2k-w0.5.mod (nostruct-align/1spa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.835852
/projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t2k-w0.5.mod(22):  Reading nostruct-align/1quqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-21924/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t2k-w0.5.mod (nostruct-align/1quqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.628906
/projects/compbio/experiments/models.97/pdb/1e/1eaxA/nostruct-align/1eaxA.t2k-w0.5.mod(22):  Reading nostruct-align/1eaxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-23510/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eaxA/nostruct-align/1eaxA.t2k-w0.5.mod (nostruct-align/1eaxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eaxA/nostruct-align/1eaxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.112879
/projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t2k-w0.5.mod(22):  Reading nostruct-align/1quqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9550/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t2k-w0.5.mod (nostruct-align/1quqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.502911
/projects/compbio/experiments/models.97/pdb/1i/1i5hW/nostruct-align/1i5hW.t2k-w0.5.mod(21):  Reading nostruct-align/1i5hW.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-17826/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5hW/nostruct-align/1i5hW.t2k-w0.5.mod (nostruct-align/1i5hW.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i5hW/nostruct-align/1i5hW.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.363911
/projects/compbio/experiments/models.97/pdb/1k/1koiA/nostruct-align/1koiA.t2k-w0.5.mod(22):  Reading nostruct-align/1koiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-25615/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1koiA/nostruct-align/1koiA.t2k-w0.5.mod (nostruct-align/1koiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1koiA/nostruct-align/1koiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.559898
/projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t2k-w0.5.mod(21):  Reading nostruct-align/1spf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-19360/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t2k-w0.5.mod (nostruct-align/1spf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.741863
/projects/compbio/experiments/models.97/pdb/1l/1lfo/nostruct-align/1lfo.t2k-w0.5.mod(22):  Reading nostruct-align/1lfo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-2062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lfo/nostruct-align/1lfo.t2k-w0.5.mod (nostruct-align/1lfo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lfo/nostruct-align/1lfo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.336874
/projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t2k-w0.5.mod(21):  Reading nostruct-align/1hleA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-16908/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t2k-w0.5.mod (nostruct-align/1hleA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.026903
/projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t2k-w0.5.mod(21):  Reading nostruct-align/1hleB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-26656/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t2k-w0.5.mod (nostruct-align/1hleB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.088903
/projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t2k-w0.5.mod(21):  Reading nostruct-align/1lh1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-30126/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t2k-w0.5.mod (nostruct-align/1lh1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.567858
/projects/compbio/experiments/models.97/pdb/1i/1ihkA/nostruct-align/1ihkA.t2k-w0.5.mod(21):  Reading nostruct-align/1ihkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-31592/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihkA/nostruct-align/1ihkA.t2k-w0.5.mod (nostruct-align/1ihkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihkA/nostruct-align/1ihkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.210855
/projects/compbio/experiments/models.97/pdb/1f/1f2eA/nostruct-align/1f2eA.t2k-w0.5.mod(21):  Reading nostruct-align/1f2eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29721/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2eA/nostruct-align/1f2eA.t2k-w0.5.mod (nostruct-align/1f2eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2eA/nostruct-align/1f2eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.027851
/projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-w0.5.mod(22):  Reading nostruct-align/3seb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-22390/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-w0.5.mod (nostruct-align/3seb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.598911
/projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t2k-w0.5.mod(21):  Reading nostruct-align/2ovo.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-12604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t2k-w0.5.mod (nostruct-align/2ovo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.937906
/projects/compbio/experiments/models.97/pdb/1k/1kb5A/nostruct-align/1kb5A.t2k-w0.5.mod(21):  Reading nostruct-align/1kb5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-2437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kb5A/nostruct-align/1kb5A.t2k-w0.5.mod (nostruct-align/1kb5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kb5A/nostruct-align/1kb5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.703873
/projects/compbio/experiments/models.97/pdb/1i/1iq3A/nostruct-align/1iq3A.t2k-w0.5.mod(21):  Reading nostruct-align/1iq3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-26279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq3A/nostruct-align/1iq3A.t2k-w0.5.mod (nostruct-align/1iq3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iq3A/nostruct-align/1iq3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.807859
/projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t2k-w0.5.mod(21):  Reading nostruct-align/1kb5B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21214/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t2k-w0.5.mod (nostruct-align/1kb5B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.861904
/projects/compbio/experiments/models.97/pdb/1h/1hzyA/nostruct-align/1hzyA.t2k-w0.5.mod(22):  Reading nostruct-align/1hzyA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-32602/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzyA/nostruct-align/1hzyA.t2k-w0.5.mod (nostruct-align/1hzyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hzyA/nostruct-align/1hzyA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.364910
/projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t2k-w0.5.mod(21):  Reading nostruct-align/1axkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-14897/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t2k-w0.5.mod (nostruct-align/1axkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.603891
/projects/compbio/experiments/models.97/pdb/1g/1g73A/nostruct-align/1g73A.t2k-w0.5.mod(22):  Reading nostruct-align/1g73A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-6315/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g73A/nostruct-align/1g73A.t2k-w0.5.mod (nostruct-align/1g73A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g73A/nostruct-align/1g73A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.218887
/projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t2k-w0.5.mod(21):  Reading nostruct-align/1sftA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-8413/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t2k-w0.5.mod (nostruct-align/1sftA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.631893
/projects/compbio/experiments/models.97/pdb/1d/1d2qA/nostruct-align/1d2qA.t2k-w0.5.mod(22):  Reading nostruct-align/1d2qA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-17073/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2qA/nostruct-align/1d2qA.t2k-w0.5.mod (nostruct-align/1d2qA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2qA/nostruct-align/1d2qA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.527855
/projects/compbio/experiments/models.97/pdb/1g/1g73C/nostruct-align/1g73C.t2k-w0.5.mod(21):  Reading nostruct-align/1g73C.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-17607/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g73C/nostruct-align/1g73C.t2k-w0.5.mod (nostruct-align/1g73C.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g73C/nostruct-align/1g73C.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.689863
/projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t2k-w0.5.mod(21):  Reading nostruct-align/1aboA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-18796/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t2k-w0.5.mod (nostruct-align/1aboA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.591885
/projects/compbio/experiments/models.97/pdb/1f/1fu9A/nostruct-align/1fu9A.t2k-w0.5.mod(21):  Reading nostruct-align/1fu9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-5412/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fu9A/nostruct-align/1fu9A.t2k-w0.5.mod (nostruct-align/1fu9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fu9A/nostruct-align/1fu9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.384892
/projects/compbio/experiments/models.97/pdb/1l/1l1dA/nostruct-align/1l1dA.t2k-w0.5.mod(22):  Reading nostruct-align/1l1dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1dA/nostruct-align/1l1dA.t2k-w0.5.mod (nostruct-align/1l1dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l1dA/nostruct-align/1l1dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.048874
/projects/compbio/experiments/models.97/pdb/1e/1ec7A/nostruct-align/1ec7A.t2k-w0.5.mod(21):  Reading nostruct-align/1ec7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc04-4969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ec7A/nostruct-align/1ec7A.t2k-w0.5.mod (nostruct-align/1ec7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ec7A/nostruct-align/1ec7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.451878
/projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-w0.5.mod(22):  Reading nostruct-align/1jsdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1406/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-w0.5.mod (nostruct-align/1jsdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jsdA/nostruct-align/1jsdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.316864
/projects/compbio/experiments/models.97/pdb/1s/1sqc/nostruct-align/1sqc.t2k-w0.5.mod(21):  Reading nostruct-align/1sqc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-20646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sqc/nostruct-align/1sqc.t2k-w0.5.mod (nostruct-align/1sqc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sqc/nostruct-align/1sqc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.208853
/projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t2k-w0.5.mod(21):  Reading nostruct-align/1cr5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-31879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t2k-w0.5.mod (nostruct-align/1cr5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.950869
/projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-w0.5.mod(22):  Reading nostruct-align/1jsdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-w0.5.mod (nostruct-align/1jsdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jsdB/nostruct-align/1jsdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.337862
/projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t2k-w0.5.mod(21):  Reading nostruct-align/2acr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-17901/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t2k-w0.5.mod (nostruct-align/2acr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.791868
/projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t2k-w0.5.mod(22):  Reading nostruct-align/1eayC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-32573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t2k-w0.5.mod (nostruct-align/1eayC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.268867
/projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t2k-w0.5.mod(21):  Reading nostruct-align/2act.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-20852/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t2k-w0.5.mod (nostruct-align/2act.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.449856
/projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t2k-w0.5.mod(21):  Reading nostruct-align/1qa4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18903/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t2k-w0.5.mod (nostruct-align/1qa4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.522861
/projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t2k-w0.5.mod(21):  Reading nostruct-align/1lgr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-31176/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t2k-w0.5.mod (nostruct-align/1lgr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.537853
/projects/compbio/experiments/models.97/pdb/1h/1h9dA/nostruct-align/1h9dA.t2k-w0.5.mod(22):  Reading nostruct-align/1h9dA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-16250/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9dA/nostruct-align/1h9dA.t2k-w0.5.mod (nostruct-align/1h9dA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9dA/nostruct-align/1h9dA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.232878
/projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t2k-w0.5.mod(22):  Reading nostruct-align/2acy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-19350/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t2k-w0.5.mod (nostruct-align/2acy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.384909
/projects/compbio/experiments/models.97/pdb/1h/1h9dB/nostruct-align/1h9dB.t2k-w0.5.mod(22):  Reading nostruct-align/1h9dB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-905/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9dB/nostruct-align/1h9dB.t2k-w0.5.mod (nostruct-align/1h9dB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9dB/nostruct-align/1h9dB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.907906
/projects/compbio/experiments/models.97/pdb/1i/1i5jA/nostruct-align/1i5jA.t2k-w0.5.mod(21):  Reading nostruct-align/1i5jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-10447/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5jA/nostruct-align/1i5jA.t2k-w0.5.mod (nostruct-align/1i5jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i5jA/nostruct-align/1i5jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.106869
/projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t2k-w0.5.mod(21):  Reading nostruct-align/1fehA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9094/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t2k-w0.5.mod (nostruct-align/1fehA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.972881
/projects/compbio/experiments/models.97/pdb/1j/1jdrA/nostruct-align/1jdrA.t2k-w0.5.mod(21):  Reading nostruct-align/1jdrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-4490/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jdrA/nostruct-align/1jdrA.t2k-w0.5.mod (nostruct-align/1jdrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jdrA/nostruct-align/1jdrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.535908
/projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t2k-w0.5.mod(21):  Reading nostruct-align/2hmx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-4022/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t2k-w0.5.mod (nostruct-align/2hmx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.859892
/projects/compbio/experiments/models.97/pdb/1a/1a6wH/nostruct-align/1a6wH.t2k-w0.5.mod(21):  Reading nostruct-align/1a6wH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27623/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6wH/nostruct-align/1a6wH.t2k-w0.5.mod (nostruct-align/1a6wH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6wH/nostruct-align/1a6wH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.633907
/projects/compbio/experiments/models.97/pdb/1a/1a6wL/nostruct-align/1a6wL.t2k-w0.5.mod(21):  Reading nostruct-align/1a6wL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a6wL/nostruct-align/1a6wL.t2k-w0.5.mod (nostruct-align/1a6wL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a6wL/nostruct-align/1a6wL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.746862
/projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-w0.5.mod(22):  Reading nostruct-align/1iq4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-15344/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-w0.5.mod (nostruct-align/1iq4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iq4A/nostruct-align/1iq4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.453865
/projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t2k-w0.5.mod(21):  Reading nostruct-align/1prcC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-430/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t2k-w0.5.mod (nostruct-align/1prcC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.884884
/projects/compbio/experiments/models.97/pdb/1q/1qniA/nostruct-align/1qniA.t2k-w0.5.mod(21):  Reading nostruct-align/1qniA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1692/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qniA/nostruct-align/1qniA.t2k-w0.5.mod (nostruct-align/1qniA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qniA/nostruct-align/1qniA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.966883
/projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-w0.5.mod(22):  Reading nostruct-align/1ey4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-8489/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-w0.5.mod (nostruct-align/1ey4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ey4A/nostruct-align/1ey4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.166861
/projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t2k-w0.5.mod(22):  Reading nostruct-align/1pymA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-5931/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t2k-w0.5.mod (nostruct-align/1pymA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.772894
/projects/compbio/experiments/models.97/pdb/1g/1g5vA/nostruct-align/1g5vA.t2k-w0.5.mod(21):  Reading nostruct-align/1g5vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-26943/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5vA/nostruct-align/1g5vA.t2k-w0.5.mod (nostruct-align/1g5vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5vA/nostruct-align/1g5vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.201899
/projects/compbio/experiments/models.97/pdb/1d/1d2rA/nostruct-align/1d2rA.t2k-w0.5.mod(21):  Reading nostruct-align/1d2rA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-27751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2rA/nostruct-align/1d2rA.t2k-w0.5.mod (nostruct-align/1d2rA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2rA/nostruct-align/1d2rA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.373875
/projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t2k-w0.5.mod(21):  Reading nostruct-align/1d2rB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-14298/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t2k-w0.5.mod (nostruct-align/1d2rB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.677885
/projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t2k-w0.5.mod(22):  Reading nostruct-align/1sra.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2372/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t2k-w0.5.mod (nostruct-align/1sra.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.385855
/projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-w0.5.mod(22):  Reading nostruct-align/1qusA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22176/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-w0.5.mod (nostruct-align/1qusA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.668871
/projects/compbio/experiments/models.97/pdb/1s/1srb/nostruct-align/1srb.t2k-w0.5.mod(21):  Reading nostruct-align/1srb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-12811/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1srb/nostruct-align/1srb.t2k-w0.5.mod (nostruct-align/1srb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1srb/nostruct-align/1srb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.858898
/projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t2k-w0.5.mod(21):  Reading nostruct-align/2adr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-22673/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t2k-w0.5.mod (nostruct-align/2adr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.823900
/projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t2k-w0.5.mod(21):  Reading nostruct-align/1cr6B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-25737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t2k-w0.5.mod (nostruct-align/1cr6B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.795881
/projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t2k-w0.5.mod(22):  Reading nostruct-align/1ytfB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-16511/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t2k-w0.5.mod (nostruct-align/1ytfB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.374893
/projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t2k-w0.5.mod(22):  Reading nostruct-align/1ytfC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-7894/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t2k-w0.5.mod (nostruct-align/1ytfC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.327858
/projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t2k-w0.5.mod(21):  Reading nostruct-align/1qa5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-20267/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t2k-w0.5.mod (nostruct-align/1qa5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.522861
/projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t2k-w0.5.mod(22):  Reading nostruct-align/1ytfD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-22361/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t2k-w0.5.mod (nostruct-align/1ytfD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.224897
/projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t2k-w0.5.mod(22):  Reading nostruct-align/1hlgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t2k-w0.5.mod (nostruct-align/1hlgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.781864
/projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t2k-w0.5.mod(21):  Reading nostruct-align/2adx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-29057/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t2k-w0.5.mod (nostruct-align/2adx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.559910
/projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t2k-w0.5.mod(21):  Reading nostruct-align/1aizA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc97-7199/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t2k-w0.5.mod (nostruct-align/1aizA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.029850
/projects/compbio/experiments/models.97/pdb/1h/1h9eA/nostruct-align/1h9eA.t2k-w0.5.mod(21):  Reading nostruct-align/1h9eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-26956/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9eA/nostruct-align/1h9eA.t2k-w0.5.mod (nostruct-align/1h9eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9eA/nostruct-align/1h9eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.678865
/projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t2k-w0.5.mod(21):  Reading nostruct-align/2hnp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-23515/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t2k-w0.5.mod (nostruct-align/2hnp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.849857
/projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t2k-w0.5.mod(21):  Reading nostruct-align/2af8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-25700/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t2k-w0.5.mod (nostruct-align/2af8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.603909
/projects/compbio/experiments/models.97/pdb/1i/1ihmA/nostruct-align/1ihmA.t2k-w0.5.mod(21):  Reading nostruct-align/1ihmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-180278/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihmA/nostruct-align/1ihmA.t2k-w0.5.mod (nostruct-align/1ihmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihmA/nostruct-align/1ihmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.187864
/projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t2k-w0.5.mod(21):  Reading nostruct-align/1sro.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-16323/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t2k-w0.5.mod (nostruct-align/1sro.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.315874
/projects/compbio/experiments/models.97/pdb/1i/1i5kC/nostruct-align/1i5kC.t2k-w0.5.mod(22):  Reading nostruct-align/1i5kC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25569/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5kC/nostruct-align/1i5kC.t2k-w0.5.mod (nostruct-align/1i5kC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i5kC/nostruct-align/1i5kC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.324863
/projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t2k-w0.5.mod(21):  Reading nostruct-align/1dtgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc07-22529/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t2k-w0.5.mod (nostruct-align/1dtgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.072889
/projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t2k-w0.5.mod(21):  Reading nostruct-align/2aviA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t2k-w0.5.mod (nostruct-align/2aviA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.154852
/projects/compbio/experiments/models.97/pdb/1a/1aqcA/nostruct-align/1aqcA.t2k-w0.5.mod(22):  Reading nostruct-align/1aqcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18668/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1aqcA/nostruct-align/1aqcA.t2k-w0.5.mod (nostruct-align/1aqcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1aqcA/nostruct-align/1aqcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.445892
/projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t2k-w0.5.mod(21):  Reading nostruct-align/2hp8.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-6058/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t2k-w0.5.mod (nostruct-align/2hp8.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.573874
/projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k-w0.5.mod(22):  Reading nostruct-align/1iq5B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30546/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k-w0.5.mod (nostruct-align/1iq5B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iq5B/nostruct-align/1iq5B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.319899
/projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t2k-w0.5.mod(21):  Reading nostruct-align/1qnjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-14577/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t2k-w0.5.mod (nostruct-align/1qnjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.439867
/projects/compbio/experiments/models.97/pdb/1g/1gj7A/nostruct-align/1gj7A.t2k-w0.5.mod(22):  Reading nostruct-align/1gj7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-11728/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gj7A/nostruct-align/1gj7A.t2k-w0.5.mod (nostruct-align/1gj7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gj7A/nostruct-align/1gj7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -15.510882
/projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t2k-w0.5.mod(21):  Reading nostruct-align/1lid.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-23671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t2k-w0.5.mod (nostruct-align/1lid.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.152897
/projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k-w0.5.mod(22):  Reading nostruct-align/1gj7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-3004/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k-w0.5.mod (nostruct-align/1gj7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gj7B/nostruct-align/1gj7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.419899
/projects/compbio/experiments/models.97/pdb/1k/1khbA/nostruct-align/1khbA.t2k-w0.5.mod(22):  Reading nostruct-align/1khbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-9424/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khbA/nostruct-align/1khbA.t2k-w0.5.mod (nostruct-align/1khbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1khbA/nostruct-align/1khbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.386890
/projects/compbio/experiments/models.97/pdb/1e/1ewwA/nostruct-align/1ewwA.t2k-w0.5.mod(21):  Reading nostruct-align/1ewwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-29591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewwA/nostruct-align/1ewwA.t2k-w0.5.mod (nostruct-align/1ewwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewwA/nostruct-align/1ewwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.235857
/projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t2k-w0.5.mod(21):  Reading nostruct-align/1dg3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-23865/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t2k-w0.5.mod (nostruct-align/1dg3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.669853
/projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-w0.5.mod(21):  Reading nostruct-align/1deuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-9457/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-w0.5.mod (nostruct-align/1deuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1deuA/nostruct-align/1deuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.832899
/projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-w0.5.mod(22):  Reading nostruct-align/1d2sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-20232/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-w0.5.mod (nostruct-align/1d2sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2sA/nostruct-align/1d2sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.514872
/projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t2k-w0.5.mod(22):  Reading nostruct-align/1xxaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-14737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t2k-w0.5.mod (nostruct-align/1xxaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.902897
/projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t2k-w0.5.mod(21):  Reading nostruct-align/1qa6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-27281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t2k-w0.5.mod (nostruct-align/1qa6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.323864
/projects/compbio/experiments/models.97/pdb/1h/1h9fA/nostruct-align/1h9fA.t2k-w0.5.mod(21):  Reading nostruct-align/1h9fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-26530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9fA/nostruct-align/1h9fA.t2k-w0.5.mod (nostruct-align/1h9fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9fA/nostruct-align/1h9fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.778862
/projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t2k-w0.5.mod(21):  Reading nostruct-align/1lis.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-20879/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t2k-w0.5.mod (nostruct-align/1lis.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.574903
/projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t2k-w0.5.mod(21):  Reading nostruct-align/1lit.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-30420/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t2k-w0.5.mod (nostruct-align/1lit.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.701880
/projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-w0.5.mod(22):  Reading nostruct-align/1e6bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-5646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-w0.5.mod (nostruct-align/1e6bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6bA/nostruct-align/1e6bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.099865
/projects/compbio/experiments/models.97/pdb/1i/1ihnA/nostruct-align/1ihnA.t2k-w0.5.mod(22):  Reading nostruct-align/1ihnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-30334/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihnA/nostruct-align/1ihnA.t2k-w0.5.mod (nostruct-align/1ihnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihnA/nostruct-align/1ihnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.744886
/projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t2k-w0.5.mod(21):  Reading nostruct-align/1sso.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-1239/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t2k-w0.5.mod (nostruct-align/1sso.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.623857
/projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t2k-w0.5.mod(21):  Reading nostruct-align/2dynA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-29389/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t2k-w0.5.mod (nostruct-align/2dynA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.751911
/projects/compbio/experiments/models.97/pdb/1j/1jf2A/nostruct-align/1jf2A.t2k-w0.5.mod(22):  Reading nostruct-align/1jf2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-1035/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf2A/nostruct-align/1jf2A.t2k-w0.5.mod (nostruct-align/1jf2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jf2A/nostruct-align/1jf2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.543858
/projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t2k-w0.5.mod(22):  Reading nostruct-align/1preA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-21885/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t2k-w0.5.mod (nostruct-align/1preA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.983879
/projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t2k-w0.5.mod(21):  Reading nostruct-align/1preB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-23200/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t2k-w0.5.mod (nostruct-align/1preB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.965895
/projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t2k-w0.5.mod(21):  Reading nostruct-align/1epnE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-22175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t2k-w0.5.mod (nostruct-align/1epnE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.748890
/projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t2k-w0.5.mod(22):  Reading nostruct-align/1umuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-6355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t2k-w0.5.mod (nostruct-align/1umuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.397905
/projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t2k-w0.5.mod(22):  Reading nostruct-align/1umuB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-18370/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t2k-w0.5.mod (nostruct-align/1umuB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.493906
/projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t2k-w0.5.mod(22):  Reading nostruct-align/1cipA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-1913/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t2k-w0.5.mod (nostruct-align/1cipA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.652889
/projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-w0.5.mod(22):  Reading nostruct-align/1khcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-3874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-w0.5.mod (nostruct-align/1khcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1khcA/nostruct-align/1khcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.762863
/projects/compbio/experiments/models.97/pdb/1e/1ewxA/nostruct-align/1ewxA.t2k-w0.5.mod(21):  Reading nostruct-align/1ewxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-815/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ewxA/nostruct-align/1ewxA.t2k-w0.5.mod (nostruct-align/1ewxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ewxA/nostruct-align/1ewxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.251858
/projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t2k-w0.5.mod(22):  Reading nostruct-align/1devB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5527/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t2k-w0.5.mod (nostruct-align/1devB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.237879
/projects/compbio/experiments/models.97/pdb/1d/1d2tA/nostruct-align/1d2tA.t2k-w0.5.mod(22):  Reading nostruct-align/1d2tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-26823/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2tA/nostruct-align/1d2tA.t2k-w0.5.mod (nostruct-align/1d2tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2tA/nostruct-align/1d2tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.175890
/projects/compbio/experiments/models.97/pdb/1x/1xxbA/nostruct-align/1xxbA.t2k-w0.5.mod(21):  Reading nostruct-align/1xxbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-4586/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xxbA/nostruct-align/1xxbA.t2k-w0.5.mod (nostruct-align/1xxbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xxbA/nostruct-align/1xxbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.764883
/projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t2k-w0.5.mod(21):  Reading nostruct-align/1devC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-16271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t2k-w0.5.mod (nostruct-align/1devC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.632877
/projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t2k-w0.5.mod(21):  Reading nostruct-align/1quuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9486/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t2k-w0.5.mod (nostruct-align/1quuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -38.063908
/projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t2k-w0.5.mod(21):  Reading nostruct-align/1abrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-3999/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t2k-w0.5.mod (nostruct-align/1abrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.679861
/projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t2k-w0.5.mod(21):  Reading nostruct-align/1abrB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-baa-1584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t2k-w0.5.mod (nostruct-align/1abrB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.146885
/projects/compbio/experiments/models.97/pdb/1c/1cr8A/nostruct-align/1cr8A.t2k-w0.5.mod(21):  Reading nostruct-align/1cr8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26158/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cr8A/nostruct-align/1cr8A.t2k-w0.5.mod (nostruct-align/1cr8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cr8A/nostruct-align/1cr8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.127878
/projects/compbio/experiments/models.97/pdb/1c/1cpzA/nostruct-align/1cpzA.t2k-w0.5.mod(21):  Reading nostruct-align/1cpzA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-26877/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cpzA/nostruct-align/1cpzA.t2k-w0.5.mod (nostruct-align/1cpzA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cpzA/nostruct-align/1cpzA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.762857
/projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t2k-w0.5.mod(21):  Reading nostruct-align/1std.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-3296/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t2k-w0.5.mod (nostruct-align/1std.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.039871
/projects/compbio/experiments/models.97/pdb/1q/1qa7A/nostruct-align/1qa7A.t2k-w0.5.mod(22):  Reading nostruct-align/1qa7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-25622/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa7A/nostruct-align/1qa7A.t2k-w0.5.mod (nostruct-align/1qa7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qa7A/nostruct-align/1qa7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.167864
/projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t2k-w0.5.mod(22):  Reading nostruct-align/1qa7B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-23620/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t2k-w0.5.mod (nostruct-align/1qa7B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.831863
/projects/compbio/experiments/models.97/pdb/3s/3sxlA/nostruct-align/3sxlA.t2k-w0.5.mod(22):  Reading nostruct-align/3sxlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-1183/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3s/3sxlA/nostruct-align/3sxlA.t2k-w0.5.mod (nostruct-align/3sxlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3s/3sxlA/nostruct-align/3sxlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.254852
/projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t2k-w0.5.mod(21):  Reading nostruct-align/1ll1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-17654/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t2k-w0.5.mod (nostruct-align/1ll1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.949860
/projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t2k-w0.5.mod(21):  Reading nostruct-align/1a88A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-20708/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t2k-w0.5.mod (nostruct-align/1a88A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.734869
/projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-w0.5.mod(22):  Reading nostruct-align/1e6cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-10032/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-w0.5.mod (nostruct-align/1e6cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6cA/nostruct-align/1e6cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.300900
/projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t2k-w0.5.mod(22):  Reading nostruct-align/1fltV.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-20175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t2k-w0.5.mod (nostruct-align/1fltV.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.746897
/projects/compbio/experiments/models.97/pdb/1i/1ihoA/nostruct-align/1ihoA.t2k-w0.5.mod(22):  Reading nostruct-align/1ihoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25772/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihoA/nostruct-align/1ihoA.t2k-w0.5.mod (nostruct-align/1ihoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihoA/nostruct-align/1ihoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.924902
/projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-w0.5.mod(22):  Reading nostruct-align/1fltX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-20361/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-w0.5.mod (nostruct-align/1fltX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.445871
/projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t2k-w0.5.mod(21):  Reading nostruct-align/1qgbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-15697/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t2k-w0.5.mod (nostruct-align/1qgbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.904856
/projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t2k-w0.5.mod(21):  Reading nostruct-align/1fltY.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-29600/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t2k-w0.5.mod (nostruct-align/1fltY.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.354885
/projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t2k-w0.5.mod(21):  Reading nostruct-align/1hssA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-27510/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t2k-w0.5.mod (nostruct-align/1hssA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.926857
/projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t2k-w0.5.mod(21):  Reading nostruct-align/7rsa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-29203/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t2k-w0.5.mod (nostruct-align/7rsa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.065882
/projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t2k-w0.5.mod(22):  Reading nostruct-align/1eaf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-22950/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t2k-w0.5.mod (nostruct-align/1eaf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.985857
/projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t2k-w0.5.mod(21):  Reading nostruct-align/1stu.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-19647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t2k-w0.5.mod (nostruct-align/1stu.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.277880
/projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t2k-w0.5.mod(21):  Reading nostruct-align/2mev1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-9465/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t2k-w0.5.mod (nostruct-align/2mev1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.988911
/projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t2k-w0.5.mod(21):  Reading nostruct-align/2mev2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-25717/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t2k-w0.5.mod (nostruct-align/2mev2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.397892
/projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t2k-w0.5.mod(21):  Reading nostruct-align/2mev4.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-22912/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t2k-w0.5.mod (nostruct-align/2mev4.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.598886
/projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t2k-w0.5.mod(21):  Reading nostruct-align/1sty.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-5327/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t2k-w0.5.mod (nostruct-align/1sty.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.068911
/projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t2k-w0.5.mod(21):  Reading nostruct-align/2wrpR.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-5071/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t2k-w0.5.mod (nostruct-align/2wrpR.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.392870
/projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t2k-w0.5.mod(21):  Reading nostruct-align/1eal.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-966/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t2k-w0.5.mod (nostruct-align/1eal.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.425859
/projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-w0.5.mod(22):  Reading nostruct-align/3sil.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-28912/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-w0.5.mod (nostruct-align/3sil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.813868
/projects/compbio/experiments/models.97/pdb/1g/1g5yA/nostruct-align/1g5yA.t2k-w0.5.mod(22):  Reading nostruct-align/1g5yA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-6374/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g5yA/nostruct-align/1g5yA.t2k-w0.5.mod (nostruct-align/1g5yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g5yA/nostruct-align/1g5yA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.837898
/projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t2k-w0.5.mod(21):  Reading nostruct-align/1xxcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-3244/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t2k-w0.5.mod (nostruct-align/1xxcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.780869
/projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t2k-w0.5.mod(22):  Reading nostruct-align/1lki.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6140/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t2k-w0.5.mod (nostruct-align/1lki.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.275852
/projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t2k-w0.5.mod(21):  Reading nostruct-align/1quvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-7658/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t2k-w0.5.mod (nostruct-align/1quvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.351873
/projects/compbio/experiments/models.97/pdb/1a/1ad1A/nostruct-align/1ad1A.t2k-w0.5.mod(21):  Reading nostruct-align/1ad1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-23111/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad1A/nostruct-align/1ad1A.t2k-w0.5.mod (nostruct-align/1ad1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ad1A/nostruct-align/1ad1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.593903
/projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t2k-w0.5.mod(21):  Reading nostruct-align/2hqi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-20677/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t2k-w0.5.mod (nostruct-align/2hqi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.760855
/projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t2k-w0.5.mod(22):  Reading nostruct-align/1lktA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25068/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t2k-w0.5.mod (nostruct-align/1lktA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.935863
/projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t2k-w0.5.mod(21):  Reading nostruct-align/3dapA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-28368/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t2k-w0.5.mod (nostruct-align/3dapA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.963871
/projects/compbio/experiments/models.97/pdb/1i/1i5nA/nostruct-align/1i5nA.t2k-w0.5.mod(22):  Reading nostruct-align/1i5nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5nA/nostruct-align/1i5nA.t2k-w0.5.mod (nostruct-align/1i5nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i5nA/nostruct-align/1i5nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.160870
/projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t2k-w0.5.mod(21):  Reading nostruct-align/1sup.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19093/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t2k-w0.5.mod (nostruct-align/1sup.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.896852
/projects/compbio/experiments/models.97/pdb/1d/1dtjA/nostruct-align/1dtjA.t2k-w0.5.mod(22):  Reading nostruct-align/1dtjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-1886/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtjA/nostruct-align/1dtjA.t2k-w0.5.mod (nostruct-align/1dtjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtjA/nostruct-align/1dtjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.573895
/projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ovaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc03-26535/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t2k-w0.5.mod (nostruct-align/1ovaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.764851
/projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t2k-w0.5.mod(22):  Reading nostruct-align/1sur.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-12380/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t2k-w0.5.mod (nostruct-align/1sur.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.198858
/projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t2k-w0.5.mod(22):  Reading nostruct-align/1hstA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-8299/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t2k-w0.5.mod (nostruct-align/1hstA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.171892
/projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t2k-w0.5.mod(21):  Reading nostruct-align/1garA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-1520/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t2k-w0.5.mod (nostruct-align/1garA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.910872
/projects/compbio/experiments/models.97/pdb/1s/1sut/nostruct-align/1sut.t2k-w0.5.mod(21):  Reading nostruct-align/1sut.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-3267/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sut/nostruct-align/1sut.t2k-w0.5.mod (nostruct-align/1sut.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sut/nostruct-align/1sut.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.812899
/projects/compbio/experiments/models.97/pdb/1p/1prgA/nostruct-align/1prgA.t2k-w0.5.mod(21):  Reading nostruct-align/1prgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-32705/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prgA/nostruct-align/1prgA.t2k-w0.5.mod (nostruct-align/1prgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prgA/nostruct-align/1prgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -31.150867
/projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t2k-w0.5.mod(21):  Reading nostruct-align/1bmlC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-3594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t2k-w0.5.mod (nostruct-align/1bmlC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.937881
/projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t2k-w0.5.mod(22):  Reading nostruct-align/1lla.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20806/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t2k-w0.5.mod (nostruct-align/1lla.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.105852
/projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-w0.5.mod(22):  Reading nostruct-align/1dg6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-18953/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-w0.5.mod (nostruct-align/1dg6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.939898
/projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-w0.5.mod(22):  Reading nostruct-align/1d2vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-4747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-w0.5.mod (nostruct-align/1d2vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.931858
/projects/compbio/experiments/models.97/pdb/1b/1bv4A/nostruct-align/1bv4A.t2k-w0.5.mod(21):  Reading nostruct-align/1bv4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-8894/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bv4A/nostruct-align/1bv4A.t2k-w0.5.mod (nostruct-align/1bv4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bv4A/nostruct-align/1bv4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.102886
/projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k-w0.5.mod(22):  Reading nostruct-align/1wfbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-19240/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k-w0.5.mod (nostruct-align/1wfbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.079908
/projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t2k-w0.5.mod(22):  Reading nostruct-align/1svb.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-10226/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t2k-w0.5.mod (nostruct-align/1svb.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.258886
/projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k-w0.5.mod(22):  Reading nostruct-align/1d2vC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-12917/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k-w0.5.mod (nostruct-align/1d2vC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2vC/nostruct-align/1d2vC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.495882
/projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k-w0.5.mod(22):  Reading nostruct-align/1gpeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-1578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k-w0.5.mod (nostruct-align/1gpeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.212851
/projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t2k-w0.5.mod(21):  Reading nostruct-align/1qa9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-19341/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t2k-w0.5.mod (nostruct-align/1qa9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.175852
/projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t2k-w0.5.mod(21):  Reading nostruct-align/1llp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-18594/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t2k-w0.5.mod (nostruct-align/1llp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.992878
/projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t2k-w0.5.mod(21):  Reading nostruct-align/1dmaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-21871/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t2k-w0.5.mod (nostruct-align/1dmaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.447870
/projects/compbio/experiments/models.97/pdb/83/830cA/nostruct-align/830cA.t2k-w0.5.mod(22):  Reading nostruct-align/830cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/83/830cA/nostruct-align/830cA.t2k-w0.5.mod (nostruct-align/830cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/83/830cA/nostruct-align/830cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.114889
/projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-w0.5.mod(21):  Reading nostruct-align/1eca.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-31856/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-w0.5.mod (nostruct-align/1eca.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.430857
/projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-w0.5.mod(22):  Reading nostruct-align/1b3aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-31538/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-w0.5.mod (nostruct-align/1b3aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.428890
/projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t2k-w0.5.mod(21):  Reading nostruct-align/1svq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5008/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t2k-w0.5.mod (nostruct-align/1svq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.443901
/projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t2k-w0.5.mod(21):  Reading nostruct-align/1svr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-20290/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t2k-w0.5.mod (nostruct-align/1svr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.443901
/projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t2k-w0.5.mod(21):  Reading nostruct-align/1ecd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-3723/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t2k-w0.5.mod (nostruct-align/1ecd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.430857
/projects/compbio/experiments/models.97/pdb/1h/1hu3A/nostruct-align/1hu3A.t2k-w0.5.mod(22):  Reading nostruct-align/1hu3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-30329/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hu3A/nostruct-align/1hu3A.t2k-w0.5.mod (nostruct-align/1hu3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hu3A/nostruct-align/1hu3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.141903
/projects/compbio/experiments/models.97/pdb/1q/1qnnA/nostruct-align/1qnnA.t2k-w0.5.mod(21):  Reading nostruct-align/1qnnA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22323/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnnA/nostruct-align/1qnnA.t2k-w0.5.mod (nostruct-align/1qnnA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qnnA/nostruct-align/1qnnA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.331882
/projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t2k-w0.5.mod(22):  Reading nostruct-align/1svy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-21175/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t2k-w0.5.mod (nostruct-align/1svy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.637894
/projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t2k-w0.5.mod(21):  Reading nostruct-align/1gc1G.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-29000/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t2k-w0.5.mod (nostruct-align/1gc1G.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.604879
/projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t2k-w0.5.mod(21):  Reading nostruct-align/1gc1H.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc47-1038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t2k-w0.5.mod (nostruct-align/1gc1H.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.343882
/projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t2k-w0.5.mod(21):  Reading nostruct-align/1ecl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-21230/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t2k-w0.5.mod (nostruct-align/1ecl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.174881
/projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t2k-w0.5.mod(22):  Reading nostruct-align/1rl2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-5051/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t2k-w0.5.mod (nostruct-align/1rl2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.777901
/projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t2k-w0.5.mod(21):  Reading nostruct-align/1eco.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-27257/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t2k-w0.5.mod (nostruct-align/1eco.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.398880
/projects/compbio/experiments/models.97/pdb/1k/1k5dB/nostruct-align/1k5dB.t2k-w0.5.mod(22):  Reading nostruct-align/1k5dB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4534/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5dB/nostruct-align/1k5dB.t2k-w0.5.mod (nostruct-align/1k5dB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k5dB/nostruct-align/1k5dB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.041893
/projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ad3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-18577/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t2k-w0.5.mod (nostruct-align/1ad3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.812883
/projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t2k-w0.5.mod(22):  Reading nostruct-align/1lml.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-26222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t2k-w0.5.mod (nostruct-align/1lml.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.663866
/projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t2k-w0.5.mod(21):  Reading nostruct-align/3tmkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13573/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t2k-w0.5.mod (nostruct-align/3tmkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.650906
/projects/compbio/experiments/models.97/pdb/1k/1kopA/nostruct-align/1kopA.t2k-w0.5.mod(21):  Reading nostruct-align/1kopA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-27785/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kopA/nostruct-align/1kopA.t2k-w0.5.mod (nostruct-align/1kopA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kopA/nostruct-align/1kopA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.034906
/projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t2k-w0.5.mod(21):  Reading nostruct-align/1lmq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-29050/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t2k-w0.5.mod (nostruct-align/1lmq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.991911
/projects/compbio/experiments/models.97/pdb/1h/1h9jA/nostruct-align/1h9jA.t2k-w0.5.mod(22):  Reading nostruct-align/1h9jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-15650/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9jA/nostruct-align/1h9jA.t2k-w0.5.mod (nostruct-align/1h9jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9jA/nostruct-align/1h9jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.549864
/projects/compbio/experiments/models.97/pdb/1j/1jztA/nostruct-align/1jztA.t2k-w0.5.mod(22):  Reading nostruct-align/1jztA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-27703/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jztA/nostruct-align/1jztA.t2k-w0.5.mod (nostruct-align/1jztA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jztA/nostruct-align/1jztA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.011879
/projects/compbio/experiments/models.97/pdb/1e/1e6fA/nostruct-align/1e6fA.t2k-w0.5.mod(22):  Reading nostruct-align/1e6fA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13696/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6fA/nostruct-align/1e6fA.t2k-w0.5.mod (nostruct-align/1e6fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6fA/nostruct-align/1e6fA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.341852
/projects/compbio/experiments/models.97/pdb/1i/1ihrA/nostruct-align/1ihrA.t2k-w0.5.mod(22):  Reading nostruct-align/1ihrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-31176/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihrA/nostruct-align/1ihrA.t2k-w0.5.mod (nostruct-align/1ihrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihrA/nostruct-align/1ihrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.191906
/projects/compbio/experiments/models.97/pdb/1i/1i5pA/nostruct-align/1i5pA.t2k-w0.5.mod(22):  Reading nostruct-align/1i5pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-28921/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i5pA/nostruct-align/1i5pA.t2k-w0.5.mod (nostruct-align/1i5pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i5pA/nostruct-align/1i5pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.419865
/projects/compbio/experiments/models.97/pdb/1f/1f2lA/nostruct-align/1f2lA.t2k-w0.5.mod(21):  Reading nostruct-align/1f2lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-27579/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2lA/nostruct-align/1f2lA.t2k-w0.5.mod (nostruct-align/1f2lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2lA/nostruct-align/1f2lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.339863
/projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t2k-w0.5.mod(21):  Reading nostruct-align/2cgpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-24029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t2k-w0.5.mod (nostruct-align/2cgpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.597870
/projects/compbio/experiments/models.97/pdb/1c/1cbjA/nostruct-align/1cbjA.t2k-w0.5.mod(21):  Reading nostruct-align/1cbjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-32061/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbjA/nostruct-align/1cbjA.t2k-w0.5.mod (nostruct-align/1cbjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cbjA/nostruct-align/1cbjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.590887
/projects/compbio/experiments/models.97/pdb/1h/1hu4A/nostruct-align/1hu4A.t2k-w0.5.mod(22):  Reading nostruct-align/1hu4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6836/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hu4A/nostruct-align/1hu4A.t2k-w0.5.mod (nostruct-align/1hu4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hu4A/nostruct-align/1hu4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.568863
/projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t2k-w0.5.mod(22):  Reading nostruct-align/1qgeE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-8954/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t2k-w0.5.mod (nostruct-align/1qgeE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgeE/nostruct-align/1qgeE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.391853
/projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t2k-w0.5.mod(21):  Reading nostruct-align/1ede.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-25623/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t2k-w0.5.mod (nostruct-align/1ede.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.356899
/projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t2k-w0.5.mod(21):  Reading nostruct-align/1gatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-8636/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t2k-w0.5.mod (nostruct-align/1gatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.036905
/projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-w0.5.mod(22):  Reading nostruct-align/1edg.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-15530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-w0.5.mod (nostruct-align/1edg.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.361862
/projects/compbio/experiments/models.97/pdb/1q/1qnoA/nostruct-align/1qnoA.t2k-w0.5.mod(21):  Reading nostruct-align/1qnoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-27797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnoA/nostruct-align/1qnoA.t2k-w0.5.mod (nostruct-align/1qnoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qnoA/nostruct-align/1qnoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.329882
/projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-w0.5.mod(22):  Reading nostruct-align/1f9vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc32-23553/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-w0.5.mod (nostruct-align/1f9vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f9vA/nostruct-align/1f9vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.993879
/projects/compbio/experiments/models.97/pdb/1e/1edn/nostruct-align/1edn.t2k-w0.5.mod(22):  Reading nostruct-align/1edn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-15225/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edn/nostruct-align/1edn.t2k-w0.5.mod (nostruct-align/1edn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edn/nostruct-align/1edn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.437855
/projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t2k-w0.5.mod(21):  Reading nostruct-align/1pysA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-4942/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t2k-w0.5.mod (nostruct-align/1pysA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.588905
/projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t2k-w0.5.mod(21):  Reading nostruct-align/1pysB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-29603/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t2k-w0.5.mod (nostruct-align/1pysB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.664909
/projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t2k-w0.5.mod(21):  Reading nostruct-align/1lnh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-4080/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t2k-w0.5.mod (nostruct-align/1lnh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.249886
/projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-w0.5.mod(22):  Reading nostruct-align/2lisA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1551/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-w0.5.mod (nostruct-align/2lisA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.574903
/projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t2k-w0.5.mod(21):  Reading nostruct-align/1edt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-4701/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t2k-w0.5.mod (nostruct-align/1edt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.917908
/projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-w0.5.mod(22):  Reading nostruct-align/1a12A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-2737/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-w0.5.mod (nostruct-align/1a12A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.279879
/projects/compbio/experiments/models.97/pdb/1k/1koqA/nostruct-align/1koqA.t2k-w0.5.mod(21):  Reading nostruct-align/1koqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-20459/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1koqA/nostruct-align/1koqA.t2k-w0.5.mod (nostruct-align/1koqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1koqA/nostruct-align/1koqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.704910
/projects/compbio/experiments/models.97/pdb/1h/1h2aL/nostruct-align/1h2aL.t2k-w0.5.mod(21):  Reading nostruct-align/1h2aL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc99-17112/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2aL/nostruct-align/1h2aL.t2k-w0.5.mod (nostruct-align/1h2aL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h2aL/nostruct-align/1h2aL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.194897
/projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t2k-w0.5.mod(21):  Reading nostruct-align/1sxl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-30152/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t2k-w0.5.mod (nostruct-align/1sxl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.490881
/projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t2k-w0.5.mod(21):  Reading nostruct-align/1bfeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-28228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t2k-w0.5.mod (nostruct-align/1bfeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.742857
/projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t2k-w0.5.mod(21):  Reading nostruct-align/2hts.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-3264/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t2k-w0.5.mod (nostruct-align/2hts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.341896
/projects/compbio/experiments/models.97/pdb/1v/1vxrA/nostruct-align/1vxrA.t2k-w0.5.mod(22):  Reading nostruct-align/1vxrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-23332/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1v/1vxrA/nostruct-align/1vxrA.t2k-w0.5.mod (nostruct-align/1vxrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1v/1vxrA/nostruct-align/1vxrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.662899
/projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t2k-w0.5.mod(21):  Reading nostruct-align/1h2aS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-23052/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t2k-w0.5.mod (nostruct-align/1h2aS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.030870
/projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t2k-w0.5.mod(21):  Reading nostruct-align/3lck.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-31971/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t2k-w0.5.mod (nostruct-align/3lck.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -27.633881
/projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t2k-w0.5.mod(22):  Reading nostruct-align/1pytA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-12815/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t2k-w0.5.mod (nostruct-align/1pytA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.691860
/projects/compbio/experiments/models.97/pdb/1k/1khhA/nostruct-align/1khhA.t2k-w0.5.mod(22):  Reading nostruct-align/1khhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-14701/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1khhA/nostruct-align/1khhA.t2k-w0.5.mod (nostruct-align/1khhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1khhA/nostruct-align/1khhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.459862
/projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t2k-w0.5.mod(21):  Reading nostruct-align/1dg9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-1368/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t2k-w0.5.mod (nostruct-align/1dg9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.253878
/projects/compbio/experiments/models.97/pdb/1l/1loi/nostruct-align/1loi.t2k-w0.5.mod(21):  Reading nostruct-align/1loi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-27880/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1loi/nostruct-align/1loi.t2k-w0.5.mod (nostruct-align/1loi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1loi/nostruct-align/1loi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.827852
/projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t2k-w0.5.mod(21):  Reading nostruct-align/1mvpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc37-19103/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t2k-w0.5.mod (nostruct-align/1mvpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.685854
/projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t2k-w0.5.mod(21):  Reading nostruct-align/1abwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4281/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t2k-w0.5.mod (nostruct-align/1abwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.232891
/projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-w0.5.mod(22):  Reading nostruct-align/1l1lA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-14055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-w0.5.mod (nostruct-align/1l1lA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l1lA/nostruct-align/1l1lA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.210859
/projects/compbio/experiments/models.97/pdb/1k/1korA/nostruct-align/1korA.t2k-w0.5.mod(22):  Reading nostruct-align/1korA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1korA/nostruct-align/1korA.t2k-w0.5.mod (nostruct-align/1korA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1korA/nostruct-align/1korA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.467905
/projects/compbio/experiments/models.97/pdb/1e/1eijA/nostruct-align/1eijA.t2k-w0.5.mod(21):  Reading nostruct-align/1eijA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-3954/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eijA/nostruct-align/1eijA.t2k-w0.5.mod (nostruct-align/1eijA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eijA/nostruct-align/1eijA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.320883
/projects/compbio/experiments/models.97/pdb/1i/1ij2A/nostruct-align/1ij2A.t2k-w0.5.mod(22):  Reading nostruct-align/1ij2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3508/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ij2A/nostruct-align/1ij2A.t2k-w0.5.mod (nostruct-align/1ij2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ij2A/nostruct-align/1ij2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.583864
/projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t2k-w0.5.mod(22):  Reading nostruct-align/1fepA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc11-22769/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t2k-w0.5.mod (nostruct-align/1fepA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.521883
/projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t2k-w0.5.mod(21):  Reading nostruct-align/1lox.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-566/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t2k-w0.5.mod (nostruct-align/1lox.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.912855
/projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t2k-w0.5.mod(21):  Reading nostruct-align/3ldh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-5724/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t2k-w0.5.mod (nostruct-align/3ldh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.683905
/projects/compbio/experiments/models.97/pdb/1f/1f2nA/nostruct-align/1f2nA.t2k-w0.5.mod(21):  Reading nostruct-align/1f2nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-26069/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2nA/nostruct-align/1f2nA.t2k-w0.5.mod (nostruct-align/1f2nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2nA/nostruct-align/1f2nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.850855
/projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-w0.5.mod(22):  Reading nostruct-align/1jf8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-3024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-w0.5.mod (nostruct-align/1jf8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jf8A/nostruct-align/1jf8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.358860
/projects/compbio/experiments/models.97/pdb/1t/1ts3A/nostruct-align/1ts3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ts3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-11317/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1ts3A/nostruct-align/1ts3A.t2k-w0.5.mod (nostruct-align/1ts3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1ts3A/nostruct-align/1ts3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.759899
/projects/compbio/experiments/models.97/pdb/1f/1fn8A/nostruct-align/1fn8A.t2k-w0.5.mod(22):  Reading nostruct-align/1fn8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-27542/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fn8A/nostruct-align/1fn8A.t2k-w0.5.mod (nostruct-align/1fn8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fn8A/nostruct-align/1fn8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.038855
/projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t2k-w0.5.mod(21):  Reading nostruct-align/1efm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-3517/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t2k-w0.5.mod (nostruct-align/1efm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.448877
/projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t2k-w0.5.mod(21):  Reading nostruct-align/1lpe.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-20296/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t2k-w0.5.mod (nostruct-align/1lpe.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.546871
/projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t2k-w0.5.mod(22):  Reading nostruct-align/1d2zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30559/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t2k-w0.5.mod (nostruct-align/1d2zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.108906
/projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t2k-w0.5.mod(22):  Reading nostruct-align/1d2zB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-25898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t2k-w0.5.mod (nostruct-align/1d2zB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.662874
/projects/compbio/experiments/models.97/pdb/1j/1jsmA/nostruct-align/1jsmA.t2k-w0.5.mod(22):  Reading nostruct-align/1jsmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-23029/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsmA/nostruct-align/1jsmA.t2k-w0.5.mod (nostruct-align/1jsmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jsmA/nostruct-align/1jsmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.404871
/projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t2k-w0.5.mod(21):  Reading nostruct-align/2alp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-24810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t2k-w0.5.mod (nostruct-align/2alp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.621908
/projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t2k-w0.5.mod(21):  Reading nostruct-align/1eh2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-18235/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t2k-w0.5.mod (nostruct-align/1eh2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.090864
/projects/compbio/experiments/models.97/pdb/1e/1ebaA/nostruct-align/1ebaA.t2k-w0.5.mod(21):  Reading nostruct-align/1ebaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-11947/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebaA/nostruct-align/1ebaA.t2k-w0.5.mod (nostruct-align/1ebaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ebaA/nostruct-align/1ebaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.419901
/projects/compbio/experiments/models.97/pdb/1j/1jsmB/nostruct-align/1jsmB.t2k-w0.5.mod(22):  Reading nostruct-align/1jsmB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-11153/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsmB/nostruct-align/1jsmB.t2k-w0.5.mod (nostruct-align/1jsmB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jsmB/nostruct-align/1jsmB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.208878
/projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t2k-w0.5.mod(21):  Reading nostruct-align/1iakA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-15357/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t2k-w0.5.mod (nostruct-align/1iakA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.824873
/projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-w0.5.mod(22):  Reading nostruct-align/1gpiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-17314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-w0.5.mod (nostruct-align/1gpiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpiA/nostruct-align/1gpiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.317852
/projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t2k-w0.5.mod(21):  Reading nostruct-align/1iakB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc09-22644/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t2k-w0.5.mod (nostruct-align/1iakB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.191906
/projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t2k-w0.5.mod(21):  Reading nostruct-align/2hvm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9481/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t2k-w0.5.mod (nostruct-align/2hvm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.623863
/projects/compbio/experiments/models.97/pdb/1h/1hloA/nostruct-align/1hloA.t2k-w0.5.mod(21):  Reading nostruct-align/1hloA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-16386/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hloA/nostruct-align/1hloA.t2k-w0.5.mod (nostruct-align/1hloA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hloA/nostruct-align/1hloA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.759882
/projects/compbio/experiments/models.97/pdb/1h/1h9mA/nostruct-align/1h9mA.t2k-w0.5.mod(21):  Reading nostruct-align/1h9mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-13831/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9mA/nostruct-align/1h9mA.t2k-w0.5.mod (nostruct-align/1h9mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9mA/nostruct-align/1h9mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.751850
/projects/compbio/experiments/models.97/pdb/1e/1eikA/nostruct-align/1eikA.t2k-w0.5.mod(21):  Reading nostruct-align/1eikA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-26395/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eikA/nostruct-align/1eikA.t2k-w0.5.mod (nostruct-align/1eikA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eikA/nostruct-align/1eikA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.238859
/projects/compbio/experiments/models.97/pdb/1i/1ihuA/nostruct-align/1ihuA.t2k-w0.5.mod(22):  Reading nostruct-align/1ihuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-4581/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihuA/nostruct-align/1ihuA.t2k-w0.5.mod (nostruct-align/1ihuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihuA/nostruct-align/1ihuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.782877
/projects/compbio/experiments/models.97/pdb/1e/1e6iA/nostruct-align/1e6iA.t2k-w0.5.mod(22):  Reading nostruct-align/1e6iA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc35-13428/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6iA/nostruct-align/1e6iA.t2k-w0.5.mod (nostruct-align/1e6iA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6iA/nostruct-align/1e6iA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.577852
/projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t2k-w0.5.mod(21):  Reading nostruct-align/3rubS.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-27427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t2k-w0.5.mod (nostruct-align/3rubS.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.399870
/projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-w0.5.mod(22):  Reading nostruct-align/1i71A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-17477/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-w0.5.mod (nostruct-align/1i71A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i71A/nostruct-align/1i71A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.046858
/projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t2k-w0.5.mod(21):  Reading nostruct-align/1qghA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-13830/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t2k-w0.5.mod (nostruct-align/1qghA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.361904
/projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t2k-w0.5.mod(21):  Reading nostruct-align/1b3eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-24648/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t2k-w0.5.mod (nostruct-align/1b3eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.039890
/projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t2k-w0.5.mod(21):  Reading nostruct-align/1dtoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-16641/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t2k-w0.5.mod (nostruct-align/1dtoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.147892
/projects/compbio/experiments/models.97/pdb/1j/1jf9A/nostruct-align/1jf9A.t2k-w0.5.mod(22):  Reading nostruct-align/1jf9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15131/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jf9A/nostruct-align/1jf9A.t2k-w0.5.mod (nostruct-align/1jf9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jf9A/nostruct-align/1jf9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.361902
/projects/compbio/experiments/models.97/pdb/1n/1nddA/nostruct-align/1nddA.t2k-w0.5.mod(22):  Reading nostruct-align/1nddA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11394/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nddA/nostruct-align/1nddA.t2k-w0.5.mod (nostruct-align/1nddA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nddA/nostruct-align/1nddA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.272898
/projects/compbio/experiments/models.97/pdb/1g/1gc5A/nostruct-align/1gc5A.t2k-w0.5.mod(22):  Reading nostruct-align/1gc5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-20740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gc5A/nostruct-align/1gc5A.t2k-w0.5.mod (nostruct-align/1gc5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gc5A/nostruct-align/1gc5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.962870
/projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t2k-w0.5.mod(21):  Reading nostruct-align/1szt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-28752/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t2k-w0.5.mod (nostruct-align/1szt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.823866
/projects/compbio/experiments/models.97/pdb/1e/1epuA/nostruct-align/1epuA.t2k-w0.5.mod(22):  Reading nostruct-align/1epuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-13626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epuA/nostruct-align/1epuA.t2k-w0.5.mod (nostruct-align/1epuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1epuA/nostruct-align/1epuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.792892
/projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t2k-w0.5.mod(21):  Reading nostruct-align/1egf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-6060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t2k-w0.5.mod (nostruct-align/1egf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.640882
/projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t2k-w0.5.mod(21):  Reading nostruct-align/1nddD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-10671/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t2k-w0.5.mod (nostruct-align/1nddD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.312883
/projects/compbio/experiments/models.97/pdb/1b/1bmqA/nostruct-align/1bmqA.t2k-w0.5.mod(21):  Reading nostruct-align/1bmqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-32756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmqA/nostruct-align/1bmqA.t2k-w0.5.mod (nostruct-align/1bmqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmqA/nostruct-align/1bmqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.229855
/projects/compbio/experiments/models.97/pdb/1b/1bmqB/nostruct-align/1bmqB.t2k-w0.5.mod(22):  Reading nostruct-align/1bmqB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-10647/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmqB/nostruct-align/1bmqB.t2k-w0.5.mod (nostruct-align/1bmqB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmqB/nostruct-align/1bmqB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.613852
/projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-w0.5.mod(22):  Reading nostruct-align/1fn9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12499/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-w0.5.mod (nostruct-align/1fn9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fn9A/nostruct-align/1fn9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.964865
/projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-w0.5.mod(22):  Reading nostruct-align/1qnrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9201/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-w0.5.mod (nostruct-align/1qnrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qnrA/nostruct-align/1qnrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.258858
/projects/compbio/experiments/models.97/pdb/1j/1j9bA/nostruct-align/1j9bA.t2k-w0.5.mod(22):  Reading nostruct-align/1j9bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-17878/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9bA/nostruct-align/1j9bA.t2k-w0.5.mod (nostruct-align/1j9bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j9bA/nostruct-align/1j9bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.584866
/projects/compbio/experiments/models.97/pdb/1l/1lqc/nostruct-align/1lqc.t2k-w0.5.mod(21):  Reading nostruct-align/1lqc.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-28747/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lqc/nostruct-align/1lqc.t2k-w0.5.mod (nostruct-align/1lqc.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lqc/nostruct-align/1lqc.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.016888
/projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t2k-w0.5.mod(22):  Reading nostruct-align/1rl6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-31983/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t2k-w0.5.mod (nostruct-align/1rl6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.321896
/projects/compbio/experiments/models.97/pdb/1a/1az3A/nostruct-align/1az3A.t2k-w0.5.mod(21):  Reading nostruct-align/1az3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-31252/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1az3A/nostruct-align/1az3A.t2k-w0.5.mod (nostruct-align/1az3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1az3A/nostruct-align/1az3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.849880
/projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t2k-w0.5.mod(21):  Reading nostruct-align/1ego.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-6350/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t2k-w0.5.mod (nostruct-align/1ego.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.189903
/projects/compbio/experiments/models.97/pdb/1k/1k5hA/nostruct-align/1k5hA.t2k-w0.5.mod(22):  Reading nostruct-align/1k5hA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-22447/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5hA/nostruct-align/1k5hA.t2k-w0.5.mod (nostruct-align/1k5hA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k5hA/nostruct-align/1k5hA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.200876
/projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t2k-w0.5.mod(21):  Reading nostruct-align/1egr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-2062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t2k-w0.5.mod (nostruct-align/1egr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.189903
/projects/compbio/experiments/models.97/pdb/1l/1l1nA/nostruct-align/1l1nA.t2k-w0.5.mod(22):  Reading nostruct-align/1l1nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-13337/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1l1nA/nostruct-align/1l1nA.t2k-w0.5.mod (nostruct-align/1l1nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1l1nA/nostruct-align/1l1nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.281895
/projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t2k-w0.5.mod(21):  Reading nostruct-align/1a15A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-736/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t2k-w0.5.mod (nostruct-align/1a15A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.641897
/projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t2k-w0.5.mod(21):  Reading nostruct-align/2thiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-20141/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t2k-w0.5.mod (nostruct-align/2thiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.237906
/projects/compbio/experiments/models.97/pdb/1g/1gpjA/nostruct-align/1gpjA.t2k-w0.5.mod(22):  Reading nostruct-align/1gpjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-21840/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpjA/nostruct-align/1gpjA.t2k-w0.5.mod (nostruct-align/1gpjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpjA/nostruct-align/1gpjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.607910
/projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t2k-w0.5.mod(21):  Reading nostruct-align/1ihvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-16537/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t2k-w0.5.mod (nostruct-align/1ihvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.896864
/projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-w0.5.mod(22):  Reading nostruct-align/1qgiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-32154/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-w0.5.mod (nostruct-align/1qgiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.279860
/projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t2k-w0.5.mod(21):  Reading nostruct-align/5znf.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-12802/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t2k-w0.5.mod (nostruct-align/5znf.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.071892
/projects/compbio/experiments/models.97/pdb/1g/1gaxA/nostruct-align/1gaxA.t2k-w0.5.mod(21):  Reading nostruct-align/1gaxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-7848/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gaxA/nostruct-align/1gaxA.t2k-w0.5.mod (nostruct-align/1gaxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gaxA/nostruct-align/1gaxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.594908
/projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t2k-w0.5.mod(21):  Reading nostruct-align/9rnt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-3929/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t2k-w0.5.mod (nostruct-align/9rnt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.648897
/projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-w0.5.mod(22):  Reading nostruct-align/1f9zA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-8384/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-w0.5.mod (nostruct-align/1f9zA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f9zA/nostruct-align/1f9zA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.086908
/projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t2k-w0.5.mod(21):  Reading nostruct-align/1lre.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-21900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t2k-w0.5.mod (nostruct-align/1lre.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.934891
/projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t2k-w0.5.mod(21):  Reading nostruct-align/1ehs.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-23992/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t2k-w0.5.mod (nostruct-align/1ehs.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.265888
/projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-w0.5.mod(22):  Reading nostruct-align/1kq3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-27180/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-w0.5.mod (nostruct-align/1kq3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kq3A/nostruct-align/1kq3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.209873
/projects/compbio/experiments/models.97/pdb/2u/2udpA/nostruct-align/2udpA.t2k-w0.5.mod(21):  Reading nostruct-align/2udpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-15228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2u/2udpA/nostruct-align/2udpA.t2k-w0.5.mod (nostruct-align/2udpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2u/2udpA/nostruct-align/2udpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.693907
/projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t2k-w0.5.mod(21):  Reading nostruct-align/2pac.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-14824/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t2k-w0.5.mod (nostruct-align/2pac.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.604910
/projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-w0.5.mod(22):  Reading nostruct-align/1dmgA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8839/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-w0.5.mod (nostruct-align/1dmgA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmgA/nostruct-align/1dmgA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.725901
/projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k-w0.5.mod(21):  Reading nostruct-align/1h9oA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-12237/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k-w0.5.mod (nostruct-align/1h9oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9oA/nostruct-align/1h9oA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.323881
/projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t2k-w0.5.mod(22):  Reading nostruct-align/1a7aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-9360/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t2k-w0.5.mod (nostruct-align/1a7aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.100882
/projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t2k-w0.5.mod(22):  Reading nostruct-align/1lrv.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-3751/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t2k-w0.5.mod (nostruct-align/1lrv.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.567858
/projects/compbio/experiments/models.97/pdb/1q/1qgjA/nostruct-align/1qgjA.t2k-w0.5.mod(21):  Reading nostruct-align/1qgjA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-372/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgjA/nostruct-align/1qgjA.t2k-w0.5.mod (nostruct-align/1qgjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgjA/nostruct-align/1qgjA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.782867
/projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t2k-w0.5.mod(21):  Reading nostruct-align/1eia.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-20682/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t2k-w0.5.mod (nostruct-align/1eia.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.980877
/projects/compbio/experiments/models.97/pdb/1c/1c6vX/nostruct-align/1c6vX.t2k-w0.5.mod(22):  Reading nostruct-align/1c6vX.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-2062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c6vX/nostruct-align/1c6vX.t2k-w0.5.mod (nostruct-align/1c6vX.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c6vX/nostruct-align/1c6vX.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.879862
/projects/compbio/experiments/models.97/pdb/1e/1epwA/nostruct-align/1epwA.t2k-w0.5.mod(21):  Reading nostruct-align/1epwA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-9550/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epwA/nostruct-align/1epwA.t2k-w0.5.mod (nostruct-align/1epwA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1epwA/nostruct-align/1epwA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.377905
/projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t2k-w0.5.mod(22):  Reading nostruct-align/1bo1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-4390/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t2k-w0.5.mod (nostruct-align/1bo1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.577862
/projects/compbio/experiments/models.97/pdb/1q/1qntA/nostruct-align/1qntA.t2k-w0.5.mod(21):  Reading nostruct-align/1qntA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-18070/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qntA/nostruct-align/1qntA.t2k-w0.5.mod (nostruct-align/1qntA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qntA/nostruct-align/1qntA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.152885
/projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t2k-w0.5.mod(21):  Reading nostruct-align/1ck7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-2358/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t2k-w0.5.mod (nostruct-align/1ck7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.675869
/projects/compbio/experiments/models.97/pdb/1c/1c6wA/nostruct-align/1c6wA.t2k-w0.5.mod(21):  Reading nostruct-align/1c6wA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-4874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1c6wA/nostruct-align/1c6wA.t2k-w0.5.mod (nostruct-align/1c6wA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1c6wA/nostruct-align/1c6wA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.276863
/projects/compbio/experiments/models.97/pdb/1k/1k5jA/nostruct-align/1k5jA.t2k-w0.5.mod(22):  Reading nostruct-align/1k5jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25941/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k5jA/nostruct-align/1k5jA.t2k-w0.5.mod (nostruct-align/1k5jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1k5jA/nostruct-align/1k5jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.629875
/projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t2k-w0.5.mod(21):  Reading nostruct-align/2aop.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-21578/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t2k-w0.5.mod (nostruct-align/2aop.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.682875
/projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t2k-w0.5.mod(21):  Reading nostruct-align/1eit.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-11618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t2k-w0.5.mod (nostruct-align/1eit.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.094851
/projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t2k-w0.5.mod(22):  Reading nostruct-align/1ebdC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18604/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t2k-w0.5.mod (nostruct-align/1ebdC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.553898
/projects/compbio/experiments/models.97/pdb/1k/1kq4A/nostruct-align/1kq4A.t2k-w0.5.mod(22):  Reading nostruct-align/1kq4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-19574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kq4A/nostruct-align/1kq4A.t2k-w0.5.mod (nostruct-align/1kq4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kq4A/nostruct-align/1kq4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.313862
/projects/compbio/experiments/models.97/pdb/2f/2fcpA/nostruct-align/2fcpA.t2k-w0.5.mod(21):  Reading nostruct-align/2fcpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc98-8423/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2f/2fcpA/nostruct-align/2fcpA.t2k-w0.5.mod (nostruct-align/2fcpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2f/2fcpA/nostruct-align/2fcpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.041903
/projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-w0.5.mod(22):  Reading nostruct-align/1dmhA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25017/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-w0.5.mod (nostruct-align/1dmhA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmhA/nostruct-align/1dmhA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.551895
/projects/compbio/experiments/models.97/pdb/1h/1hlrA/nostruct-align/1hlrA.t2k-w0.5.mod(22):  Reading nostruct-align/1hlrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-26437/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlrA/nostruct-align/1hlrA.t2k-w0.5.mod (nostruct-align/1hlrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hlrA/nostruct-align/1hlrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.604904
/projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-w0.5.mod(22):  Reading nostruct-align/1lst.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17074/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-w0.5.mod (nostruct-align/1lst.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.981878
/projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t2k-w0.5.mod(21):  Reading nostruct-align/1cxlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-30546/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t2k-w0.5.mod (nostruct-align/1cxlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.233894
/projects/compbio/experiments/models.97/pdb/1i/1i74A/nostruct-align/1i74A.t2k-w0.5.mod(22):  Reading nostruct-align/1i74A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-31369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i74A/nostruct-align/1i74A.t2k-w0.5.mod (nostruct-align/1i74A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i74A/nostruct-align/1i74A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.301878
/projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t2k-w0.5.mod(21):  Reading nostruct-align/1qgkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-17055/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t2k-w0.5.mod (nostruct-align/1qgkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.088911
/projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t2k-w0.5.mod(21):  Reading nostruct-align/1dv0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-5665/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t2k-w0.5.mod (nostruct-align/1dv0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.316900
/projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-w0.5.mod(22):  Reading nostruct-align/1epxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18593/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-w0.5.mod (nostruct-align/1epxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1epxA/nostruct-align/1epxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.879879
/projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t2k-w0.5.mod(22):  Reading nostruct-align/1zbdB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-591/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t2k-w0.5.mod (nostruct-align/1zbdB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.363909
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Reading nostruct-align/1bmtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod (nostruct-align/1bmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.390909
/projects/compbio/experiments/models.97/pdb/1j/1j9eA/nostruct-align/1j9eA.t2k-w0.5.mod(22):  Reading nostruct-align/1j9eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-14326/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9eA/nostruct-align/1j9eA.t2k-w0.5.mod (nostruct-align/1j9eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j9eA/nostruct-align/1j9eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.706873
/projects/compbio/experiments/models.97/pdb/1g/1g6aA/nostruct-align/1g6aA.t2k-w0.5.mod(21):  Reading nostruct-align/1g6aA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc83-12367/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6aA/nostruct-align/1g6aA.t2k-w0.5.mod (nostruct-align/1g6aA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6aA/nostruct-align/1g6aA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.801857
/projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t2k-w0.5.mod(22):  Reading nostruct-align/1heiA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-30969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t2k-w0.5.mod (nostruct-align/1heiA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.352888
/projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k-w0.5.mod(21):  Reading nostruct-align/2apr.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-29071/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k-w0.5.mod (nostruct-align/2apr.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.480881
/projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t2k-w0.5.mod(21):  Reading nostruct-align/1ltm.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc14-14105/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t2k-w0.5.mod (nostruct-align/1ltm.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.738861
/projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t2k-w0.5.mod(21):  Reading nostruct-align/1gpmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-17041/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t2k-w0.5.mod (nostruct-align/1gpmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.848890
/projects/compbio/experiments/models.97/pdb/1k/1kq5A/nostruct-align/1kq5A.t2k-w0.5.mod(22):  Reading nostruct-align/1kq5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-8419/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kq5A/nostruct-align/1kq5A.t2k-w0.5.mod (nostruct-align/1kq5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kq5A/nostruct-align/1kq5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.925911
/projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t2k-w0.5.mod(21):  Reading nostruct-align/1a7cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-20275/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t2k-w0.5.mod (nostruct-align/1a7cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.268854
/projects/compbio/experiments/models.97/pdb/1e/1e6mA/nostruct-align/1e6mA.t2k-w0.5.mod(21):  Reading nostruct-align/1e6mA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc27-25507/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6mA/nostruct-align/1e6mA.t2k-w0.5.mod (nostruct-align/1e6mA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6mA/nostruct-align/1e6mA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.058908
/projects/compbio/experiments/models.97/pdb/1f/1feuA/nostruct-align/1feuA.t2k-w0.5.mod(22):  Reading nostruct-align/1feuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-20991/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1feuA/nostruct-align/1feuA.t2k-w0.5.mod (nostruct-align/1feuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1feuA/nostruct-align/1feuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.589909
/projects/compbio/experiments/models.97/pdb/1d/1dv1A/nostruct-align/1dv1A.t2k-w0.5.mod(21):  Reading nostruct-align/1dv1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-25804/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dv1A/nostruct-align/1dv1A.t2k-w0.5.mod (nostruct-align/1dv1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dv1A/nostruct-align/1dv1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.662851
/projects/compbio/experiments/models.97/pdb/1f/1f41A/nostruct-align/1f41A.t2k-w0.5.mod(21):  Reading nostruct-align/1f41A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-8305/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f41A/nostruct-align/1f41A.t2k-w0.5.mod (nostruct-align/1f41A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f41A/nostruct-align/1f41A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.437864
/projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-w0.5.mod(22):  Reading nostruct-align/1molA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-12159/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-w0.5.mod (nostruct-align/1molA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.521875
/projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t2k-w0.5.mod(21):  Reading nostruct-align/3ssi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-19756/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t2k-w0.5.mod (nostruct-align/3ssi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.828852
/projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t2k-w0.5.mod(21):  Reading nostruct-align/1ck9A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-12063/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t2k-w0.5.mod (nostruct-align/1ck9A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.293869
/projects/compbio/experiments/models.97/pdb/2p/2pcy/nostruct-align/2pcy.t2k-w0.5.mod(21):  Reading nostruct-align/2pcy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-20597/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pcy/nostruct-align/2pcy.t2k-w0.5.mod (nostruct-align/2pcy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pcy/nostruct-align/2pcy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.986879
/projects/compbio/experiments/models.97/pdb/1e/1exbA/nostruct-align/1exbA.t2k-w0.5.mod(21):  Reading nostruct-align/1exbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-8094/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1exbA/nostruct-align/1exbA.t2k-w0.5.mod (nostruct-align/1exbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1exbA/nostruct-align/1exbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.697882
/projects/compbio/experiments/models.97/pdb/1f/1fthA/nostruct-align/1fthA.t2k-w0.5.mod(22):  Reading nostruct-align/1fthA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-25272/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fthA/nostruct-align/1fthA.t2k-w0.5.mod (nostruct-align/1fthA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fthA/nostruct-align/1fthA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.092897
/projects/compbio/experiments/models.97/pdb/1e/1ebfA/nostruct-align/1ebfA.t2k-w0.5.mod(22):  Reading nostruct-align/1ebfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-11217/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ebfA/nostruct-align/1ebfA.t2k-w0.5.mod (nostruct-align/1ebfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ebfA/nostruct-align/1ebfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.785904
/projects/compbio/experiments/models.97/pdb/1j/1jsrA/nostruct-align/1jsrA.t2k-w0.5.mod(22):  Reading nostruct-align/1jsrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-14577/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsrA/nostruct-align/1jsrA.t2k-w0.5.mod (nostruct-align/1jsrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jsrA/nostruct-align/1jsrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.567862
/projects/compbio/experiments/models.97/pdb/1i/1iapA/nostruct-align/1iapA.t2k-w0.5.mod(22):  Reading nostruct-align/1iapA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-3331/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iapA/nostruct-align/1iapA.t2k-w0.5.mod (nostruct-align/1iapA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iapA/nostruct-align/1iapA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.471905
/projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t2k-w0.5.mod(21):  Reading nostruct-align/2drpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-24395/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t2k-w0.5.mod (nostruct-align/2drpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -32.470901
/projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t2k-w0.5.mod(22):  Reading nostruct-align/1bmv1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-14519/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t2k-w0.5.mod (nostruct-align/1bmv1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.231901
/projects/compbio/experiments/models.97/pdb/1h/1hn2A/nostruct-align/1hn2A.t2k-w0.5.mod(22):  Reading nostruct-align/1hn2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-5173/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hn2A/nostruct-align/1hn2A.t2k-w0.5.mod (nostruct-align/1hn2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hn2A/nostruct-align/1hn2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.751858
/projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t2k-w0.5.mod(21):  Reading nostruct-align/2pdd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-4427/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t2k-w0.5.mod (nostruct-align/2pdd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.569880
/projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t2k-w0.5.mod(22):  Reading nostruct-align/1bmv2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-11969/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t2k-w0.5.mod (nostruct-align/1bmv2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.087875
/projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t2k-w0.5.mod(21):  Reading nostruct-align/2pde.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-23104/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t2k-w0.5.mod (nostruct-align/2pde.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.569880
/projects/compbio/experiments/models.97/pdb/1i/1ij8A/nostruct-align/1ij8A.t2k-w0.5.mod(22):  Reading nostruct-align/1ij8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2931/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ij8A/nostruct-align/1ij8A.t2k-w0.5.mod (nostruct-align/1ij8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ij8A/nostruct-align/1ij8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.192892
/projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t2k-w0.5.mod(21):  Reading nostruct-align/1ldtL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23618/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t2k-w0.5.mod (nostruct-align/1ldtL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.594866
/projects/compbio/experiments/models.97/pdb/1i/1i76A/nostruct-align/1i76A.t2k-w0.5.mod(21):  Reading nostruct-align/1i76A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25345/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i76A/nostruct-align/1i76A.t2k-w0.5.mod (nostruct-align/1i76A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i76A/nostruct-align/1i76A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.599880
/projects/compbio/experiments/models.97/pdb/1q/1qgmA/nostruct-align/1qgmA.t2k-w0.5.mod(21):  Reading nostruct-align/1qgmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc81-13130/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgmA/nostruct-align/1qgmA.t2k-w0.5.mod (nostruct-align/1qgmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgmA/nostruct-align/1qgmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -16.811901
/projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t2k-w0.5.mod(21):  Reading nostruct-align/1b3jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-9588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t2k-w0.5.mod (nostruct-align/1b3jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.439877
/projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t2k-w0.5.mod(22):  Reading nostruct-align/1kwaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc42-2028/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t2k-w0.5.mod (nostruct-align/1kwaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.594873
/projects/compbio/experiments/models.97/pdb/1m/1mhcB/nostruct-align/1mhcB.t2k-w0.5.mod(21):  Reading nostruct-align/1mhcB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-31292/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhcB/nostruct-align/1mhcB.t2k-w0.5.mod (nostruct-align/1mhcB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhcB/nostruct-align/1mhcB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.486897
/projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t2k-w0.5.mod(22):  Reading nostruct-align/1dttA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-30963/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t2k-w0.5.mod (nostruct-align/1dttA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.145855
/projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-w0.5.mod(22):  Reading nostruct-align/1f2tA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-5574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-w0.5.mod (nostruct-align/1f2tA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2tA/nostruct-align/1f2tA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.803864
/projects/compbio/experiments/models.97/pdb/1f/1f42A/nostruct-align/1f42A.t2k-w0.5.mod(22):  Reading nostruct-align/1f42A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-28300/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f42A/nostruct-align/1f42A.t2k-w0.5.mod (nostruct-align/1f42A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f42A/nostruct-align/1f42A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.274899
/projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t2k-w0.5.mod(21):  Reading nostruct-align/1kwaB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-24199/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t2k-w0.5.mod (nostruct-align/1kwaB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.622881
/projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k-w0.5.mod(21):  Reading nostruct-align/1f2tB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc24-28134/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k-w0.5.mod (nostruct-align/1f2tB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2tB/nostruct-align/1f2tB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.944880
/projects/compbio/experiments/models.97/pdb/1c/1cd0A/nostruct-align/1cd0A.t2k-w0.5.mod(21):  Reading nostruct-align/1cd0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-9610/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd0A/nostruct-align/1cd0A.t2k-w0.5.mod (nostruct-align/1cd0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cd0A/nostruct-align/1cd0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.576866
/projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t2k-w0.5.mod(21):  Reading nostruct-align/2vhbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-15125/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t2k-w0.5.mod (nostruct-align/2vhbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.149868
/projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t2k-w0.5.mod(21):  Reading nostruct-align/2vhbB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-5541/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t2k-w0.5.mod (nostruct-align/2vhbB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.547876
/projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t2k-w0.5.mod(21):  Reading nostruct-align/2pf1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-18155/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t2k-w0.5.mod (nostruct-align/2pf1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.254862
/projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t2k-w0.5.mod(22):  Reading nostruct-align/1bo4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-6545/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t2k-w0.5.mod (nostruct-align/1bo4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.993908
/projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t2k-w0.5.mod(21):  Reading nostruct-align/1bo4B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc31-17295/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t2k-w0.5.mod (nostruct-align/1bo4B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.485891
/projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t2k-w0.5.mod(22):  Reading nostruct-align/1nksA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9382/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t2k-w0.5.mod (nostruct-align/1nksA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.655903
/projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t2k-w0.5.mod(21):  Reading nostruct-align/1ryp1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-4620/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t2k-w0.5.mod (nostruct-align/1ryp1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.032862
/projects/compbio/experiments/models.97/pdb/1d/1dfaA/nostruct-align/1dfaA.t2k-w0.5.mod(22):  Reading nostruct-align/1dfaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1442/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfaA/nostruct-align/1dfaA.t2k-w0.5.mod (nostruct-align/1dfaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfaA/nostruct-align/1dfaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -30.486887
/projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t2k-w0.5.mod(22):  Reading nostruct-align/1ryp2.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc30-17301/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t2k-w0.5.mod (nostruct-align/1ryp2.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.923893
/projects/compbio/experiments/models.97/pdb/1h/1hekA/nostruct-align/1hekA.t2k-w0.5.mod(22):  Reading nostruct-align/1hekA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-14354/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hekA/nostruct-align/1hekA.t2k-w0.5.mod (nostruct-align/1hekA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hekA/nostruct-align/1hekA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.116886
/projects/compbio/experiments/models.97/pdb/1e/1elt/nostruct-align/1elt.t2k-w0.5.mod(21):  Reading nostruct-align/1elt.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc57-30787/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1elt/nostruct-align/1elt.t2k-w0.5.mod (nostruct-align/1elt.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1elt/nostruct-align/1elt.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.934864
/projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t2k-w0.5.mod(21):  Reading nostruct-align/1lvk.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-18236/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t2k-w0.5.mod (nostruct-align/1lvk.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.310867
/projects/compbio/experiments/models.97/pdb/1j/1jssA/nostruct-align/1jssA.t2k-w0.5.mod(22):  Reading nostruct-align/1jssA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc75-10548/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jssA/nostruct-align/1jssA.t2k-w0.5.mod (nostruct-align/1jssA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jssA/nostruct-align/1jssA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.316864
/projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t2k-w0.5.mod(21):  Reading nostruct-align/1lvl.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc17-24509/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t2k-w0.5.mod (nostruct-align/1lvl.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.654907
/projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t2k-w0.5.mod(21):  Reading nostruct-align/1cqeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc12-28232/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t2k-w0.5.mod (nostruct-align/1cqeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.666874
/projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t2k-w0.5.mod(22):  Reading nostruct-align/1xbrA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-19495/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t2k-w0.5.mod (nostruct-align/1xbrA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.532852
/projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t2k-w0.5.mod(21):  Reading nostruct-align/2pec.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc29-10799/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t2k-w0.5.mod (nostruct-align/2pec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.363903
/projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t2k-w0.5.mod(21):  Reading nostruct-align/8prkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc61-32151/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t2k-w0.5.mod (nostruct-align/8prkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.730896
/projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t2k-w0.5.mod(21):  Reading nostruct-align/3pga1.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-10062/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t2k-w0.5.mod (nostruct-align/3pga1.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.600880
/projects/compbio/experiments/models.97/pdb/1h/1h9sA/nostruct-align/1h9sA.t2k-w0.5.mod(21):  Reading nostruct-align/1h9sA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-12626/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1h9sA/nostruct-align/1h9sA.t2k-w0.5.mod (nostruct-align/1h9sA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1h9sA/nostruct-align/1h9sA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.517853
/projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t2k-w0.5.mod(21):  Reading nostruct-align/8prkB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc56-4126/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t2k-w0.5.mod (nostruct-align/8prkB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.737911
/projects/compbio/experiments/models.97/pdb/2a/2at9/nostruct-align/2at9.t2k-w0.5.mod(21):  Reading nostruct-align/2at9.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-6170/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2at9/nostruct-align/2at9.t2k-w0.5.mod (nostruct-align/2at9.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2at9/nostruct-align/2at9.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.747856
/projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t2k-w0.5.mod(21):  Reading nostruct-align/1t7pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-16451/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t2k-w0.5.mod (nostruct-align/1t7pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.158867
/projects/compbio/experiments/models.97/pdb/1r/1rypA/nostruct-align/1rypA.t2k-w0.5.mod(21):  Reading nostruct-align/1rypA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-15581/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypA/nostruct-align/1rypA.t2k-w0.5.mod (nostruct-align/1rypA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypA/nostruct-align/1rypA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.635874
/projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t2k-w0.5.mod(21):  Reading nostruct-align/1bfmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-2351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t2k-w0.5.mod (nostruct-align/1bfmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.513874
/projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t2k-w0.5.mod(22):  Reading nostruct-align/1mhdA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-29038/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t2k-w0.5.mod (nostruct-align/1mhdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.988876
/projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t2k-w0.5.mod(22):  Reading nostruct-align/1rypB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-27669/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t2k-w0.5.mod (nostruct-align/1rypB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.748854
/projects/compbio/experiments/models.97/pdb/1f/1fewA/nostruct-align/1fewA.t2k-w0.5.mod(21):  Reading nostruct-align/1fewA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-16729/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fewA/nostruct-align/1fewA.t2k-w0.5.mod (nostruct-align/1fewA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fewA/nostruct-align/1fewA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.489904
/projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t2k-w0.5.mod(21):  Reading nostruct-align/1rypC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc33-13665/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t2k-w0.5.mod (nostruct-align/1rypC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.569860
/projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t2k-w0.5.mod(22):  Reading nostruct-align/1ema.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30042/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t2k-w0.5.mod (nostruct-align/1ema.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.711882
/projects/compbio/experiments/models.97/pdb/1f/1f43A/nostruct-align/1f43A.t2k-w0.5.mod(21):  Reading nostruct-align/1f43A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-28714/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f43A/nostruct-align/1f43A.t2k-w0.5.mod (nostruct-align/1f43A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f43A/nostruct-align/1f43A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.609886
/projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t2k-w0.5.mod(21):  Reading nostruct-align/1rypD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-12880/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t2k-w0.5.mod (nostruct-align/1rypD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.822857
/projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t2k-w0.5.mod(21):  Reading nostruct-align/1rypE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-25118/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t2k-w0.5.mod (nostruct-align/1rypE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.842905
/projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t2k-w0.5.mod(21):  Reading nostruct-align/1cd1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-1163/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t2k-w0.5.mod (nostruct-align/1cd1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.254877
/projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t2k-w0.5.mod(21):  Reading nostruct-align/1rypF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-341/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t2k-w0.5.mod (nostruct-align/1rypF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.426889
/projects/compbio/experiments/models.97/pdb/1e/1e6oH/nostruct-align/1e6oH.t2k-w0.5.mod(22):  Reading nostruct-align/1e6oH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-1068/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6oH/nostruct-align/1e6oH.t2k-w0.5.mod (nostruct-align/1e6oH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6oH/nostruct-align/1e6oH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.358881
/projects/compbio/experiments/models.97/pdb/1r/1rypH/nostruct-align/1rypH.t2k-w0.5.mod(21):  Reading nostruct-align/1rypH.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-22250/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypH/nostruct-align/1rypH.t2k-w0.5.mod (nostruct-align/1rypH.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypH/nostruct-align/1rypH.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.156898
/projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-w0.5.mod(22):  Reading nostruct-align/1kafA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-9193/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-w0.5.mod (nostruct-align/1kafA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1k/1kafA/nostruct-align/1kafA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.324883
/projects/compbio/experiments/models.97/pdb/1r/1rypI/nostruct-align/1rypI.t2k-w0.5.mod(21):  Reading nostruct-align/1rypI.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-12024/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypI/nostruct-align/1rypI.t2k-w0.5.mod (nostruct-align/1rypI.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypI/nostruct-align/1rypI.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.345865
/projects/compbio/experiments/models.97/pdb/1r/1rypJ/nostruct-align/1rypJ.t2k-w0.5.mod(21):  Reading nostruct-align/1rypJ.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30408/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypJ/nostruct-align/1rypJ.t2k-w0.5.mod (nostruct-align/1rypJ.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypJ/nostruct-align/1rypJ.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.010853
/projects/compbio/experiments/models.97/pdb/1e/1e6oL/nostruct-align/1e6oL.t2k-w0.5.mod(22):  Reading nostruct-align/1e6oL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc84-22720/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6oL/nostruct-align/1e6oL.t2k-w0.5.mod (nostruct-align/1e6oL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6oL/nostruct-align/1e6oL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.759907
/projects/compbio/experiments/models.97/pdb/1r/1rypK/nostruct-align/1rypK.t2k-w0.5.mod(21):  Reading nostruct-align/1rypK.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc40-29196/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypK/nostruct-align/1rypK.t2k-w0.5.mod (nostruct-align/1rypK.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypK/nostruct-align/1rypK.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.829851
/projects/compbio/experiments/models.97/pdb/1r/1rypL/nostruct-align/1rypL.t2k-w0.5.mod(22):  Reading nostruct-align/1rypL.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc55-9584/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rypL/nostruct-align/1rypL.t2k-w0.5.mod (nostruct-align/1rypL.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1r/1rypL/nostruct-align/1rypL.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.759882
/projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t2k-w0.5.mod(21):  Reading nostruct-align/1qp6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-15902/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t2k-w0.5.mod (nostruct-align/1qp6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.162903
/projects/compbio/experiments/models.97/pdb/1q/1qnxA/nostruct-align/1qnxA.t2k-w0.5.mod(22):  Reading nostruct-align/1qnxA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-31206/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qnxA/nostruct-align/1qnxA.t2k-w0.5.mod (nostruct-align/1qnxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qnxA/nostruct-align/1qnxA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.844893
/projects/compbio/experiments/models.97/pdb/1j/1jljA/nostruct-align/1jljA.t2k-w0.5.mod(22):  Reading nostruct-align/1jljA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-4100/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jljA/nostruct-align/1jljA.t2k-w0.5.mod (nostruct-align/1jljA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jljA/nostruct-align/1jljA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.006891
/projects/compbio/experiments/models.97/pdb/2a/2asi/nostruct-align/2asi.t2k-w0.5.mod(21):  Reading nostruct-align/2asi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-9168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2a/2asi/nostruct-align/2asi.t2k-w0.5.mod (nostruct-align/2asi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2a/2asi/nostruct-align/2asi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.295881
/projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t2k-w0.5.mod(21):  Reading nostruct-align/1emn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc16-23523/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t2k-w0.5.mod (nostruct-align/1emn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.092871
/projects/compbio/experiments/models.97/pdb/3f/3fapB/nostruct-align/3fapB.t2k-w0.5.mod(22):  Reading nostruct-align/3fapB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-1586/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3f/3fapB/nostruct-align/3fapB.t2k-w0.5.mod (nostruct-align/3fapB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3f/3fapB/nostruct-align/3fapB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.276880
/projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t2k-w0.5.mod(21):  Reading nostruct-align/1qvaA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-10060/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t2k-w0.5.mod (nostruct-align/1qvaA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.840878
/projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t2k-w0.5.mod(22):  Reading nostruct-align/1iarB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc63-25314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t2k-w0.5.mod (nostruct-align/1iarB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -28.155857
/projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t2k-w0.5.mod(22):  Reading nostruct-align/1dmlA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc54-13704/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t2k-w0.5.mod (nostruct-align/1dmlA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.594866
/projects/compbio/experiments/models.97/pdb/1h/1hn4A/nostruct-align/1hn4A.t2k-w0.5.mod(22):  Reading nostruct-align/1hn4A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-5652/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hn4A/nostruct-align/1hn4A.t2k-w0.5.mod (nostruct-align/1hn4A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hn4A/nostruct-align/1hn4A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.200891
/projects/compbio/experiments/models.97/pdb/1h/1hlvA/nostruct-align/1hlvA.t2k-w0.5.mod(22):  Reading nostruct-align/1hlvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-9717/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hlvA/nostruct-align/1hlvA.t2k-w0.5.mod (nostruct-align/1hlvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1h/1hlvA/nostruct-align/1hlvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.255884
/projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t2k-w0.5.mod(22):  Reading nostruct-align/1dmlB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc69-25588/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t2k-w0.5.mod (nostruct-align/1dmlB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.304855
/projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t2k-w0.5.mod(22):  Reading nostruct-align/1ek0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-12504/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t2k-w0.5.mod (nostruct-align/1ek0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.803865
/projects/compbio/experiments/models.97/pdb/1e/1e6pA/nostruct-align/1e6pA.t2k-w0.5.mod(21):  Reading nostruct-align/1e6pA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc38-29810/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6pA/nostruct-align/1e6pA.t2k-w0.5.mod (nostruct-align/1e6pA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6pA/nostruct-align/1e6pA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.826868
/projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t2k-w0.5.mod(21):  Reading nostruct-align/1cxpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc52-31090/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t2k-w0.5.mod (nostruct-align/1cxpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.885900
/projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t2k-w0.5.mod(22):  Reading nostruct-align/1cxpC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-18006/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t2k-w0.5.mod (nostruct-align/1cxpC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.884853
/projects/compbio/experiments/models.97/pdb/1i/1i78A/nostruct-align/1i78A.t2k-w0.5.mod(22):  Reading nostruct-align/1i78A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-24388/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1i78A/nostruct-align/1i78A.t2k-w0.5.mod (nostruct-align/1i78A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1i78A/nostruct-align/1i78A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.932898
/projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t2k-w0.5.mod(22):  Reading nostruct-align/1qgoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-11184/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t2k-w0.5.mod (nostruct-align/1qgoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.726910
/projects/compbio/experiments/models.97/pdb/1f/1fexA/nostruct-align/1fexA.t2k-w0.5.mod(21):  Reading nostruct-align/1fexA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-19961/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fexA/nostruct-align/1fexA.t2k-w0.5.mod (nostruct-align/1fexA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fexA/nostruct-align/1fexA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.928865
/projects/compbio/experiments/models.97/pdb/1d/1dtvA/nostruct-align/1dtvA.t2k-w0.5.mod(21):  Reading nostruct-align/1dtvA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1270/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtvA/nostruct-align/1dtvA.t2k-w0.5.mod (nostruct-align/1dtvA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtvA/nostruct-align/1dtvA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.409904
/projects/compbio/experiments/models.97/pdb/1f/1f2vA/nostruct-align/1f2vA.t2k-w0.5.mod(22):  Reading nostruct-align/1f2vA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-11355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f2vA/nostruct-align/1f2vA.t2k-w0.5.mod (nostruct-align/1f2vA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f2vA/nostruct-align/1f2vA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.172874
/projects/compbio/experiments/models.97/pdb/1f/1f44A/nostruct-align/1f44A.t2k-w0.5.mod(22):  Reading nostruct-align/1f44A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc48-1260/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f44A/nostruct-align/1f44A.t2k-w0.5.mod (nostruct-align/1f44A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f44A/nostruct-align/1f44A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.813875
/projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t2k-w0.5.mod(21):  Reading nostruct-align/3ebx.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-20930/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t2k-w0.5.mod (nostruct-align/3ebx.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.186911
/projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t2k-w0.5.mod(21):  Reading nostruct-align/1enh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-26769/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t2k-w0.5.mod (nostruct-align/1enh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.336872
/projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t2k-w0.5.mod(21):  Reading nostruct-align/1lxa.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21860/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t2k-w0.5.mod (nostruct-align/1lxa.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.438875
/projects/compbio/experiments/models.97/pdb/1f/1fmaD/nostruct-align/1fmaD.t2k-w0.5.mod(21):  Reading nostruct-align/1fmaD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-20109/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmaD/nostruct-align/1fmaD.t2k-w0.5.mod (nostruct-align/1fmaD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmaD/nostruct-align/1fmaD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.237871
/projects/compbio/experiments/models.97/pdb/1f/1fmaE/nostruct-align/1fmaE.t2k-w0.5.mod(21):  Reading nostruct-align/1fmaE.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-674/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmaE/nostruct-align/1fmaE.t2k-w0.5.mod (nostruct-align/1fmaE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmaE/nostruct-align/1fmaE.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.129869
/projects/compbio/experiments/models.97/pdb/1e/1eno/nostruct-align/1eno.t2k-w0.5.mod(21):  Reading nostruct-align/1eno.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-1049/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eno/nostruct-align/1eno.t2k-w0.5.mod (nostruct-align/1eno.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eno/nostruct-align/1eno.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.550879
/projects/compbio/experiments/models.97/pdb/1g/1g6eA/nostruct-align/1g6eA.t2k-w0.5.mod(21):  Reading nostruct-align/1g6eA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc21-9664/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6eA/nostruct-align/1g6eA.t2k-w0.5.mod (nostruct-align/1g6eA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6eA/nostruct-align/1g6eA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.977886
/projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t2k-w0.5.mod(21):  Reading nostruct-align/1enp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-14222/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t2k-w0.5.mod (nostruct-align/1enp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.476889
/projects/compbio/experiments/models.97/pdb/1d/1dfcA/nostruct-align/1dfcA.t2k-w0.5.mod(22):  Reading nostruct-align/1dfcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-1651/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfcA/nostruct-align/1dfcA.t2k-w0.5.mod (nostruct-align/1dfcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfcA/nostruct-align/1dfcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.589880
/projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t2k-w0.5.mod(22):  Reading nostruct-align/1tyfA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-18256/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t2k-w0.5.mod (nostruct-align/1tyfA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.557856
/projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t2k-w0.5.mod(21):  Reading nostruct-align/1qvbA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-4939/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t2k-w0.5.mod (nostruct-align/1qvbA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.004854
/projects/compbio/experiments/models.97/pdb/1f/1ftkA/nostruct-align/1ftkA.t2k-w0.5.mod(22):  Reading nostruct-align/1ftkA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-23889/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1ftkA/nostruct-align/1ftkA.t2k-w0.5.mod (nostruct-align/1ftkA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1ftkA/nostruct-align/1ftkA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.025866
/projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t2k-w0.5.mod(21):  Reading nostruct-align/1cd31.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc06-20546/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t2k-w0.5.mod (nostruct-align/1cd31.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.457874
/projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-w0.5.mod(22):  Reading nostruct-align/1ju3A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9479/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-w0.5.mod (nostruct-align/1ju3A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1ju3A/nostruct-align/1ju3A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.782909
/projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t2k-w0.5.mod(21):  Reading nostruct-align/1tac.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-7713/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t2k-w0.5.mod (nostruct-align/1tac.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.036888
/projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t2k-w0.5.mod(22):  Reading nostruct-align/1jsuC.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-452/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t2k-w0.5.mod (nostruct-align/1jsuC.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.872873
/projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t2k-w0.5.mod(22):  Reading nostruct-align/1eny.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-18898/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t2k-w0.5.mod (nostruct-align/1eny.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.784899
/projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t2k-w0.5.mod(21):  Reading nostruct-align/1tag.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc41-20834/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t2k-w0.5.mod (nostruct-align/1tag.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.410873
/projects/compbio/experiments/models.97/pdb/1d/1dmmA/nostruct-align/1dmmA.t2k-w0.5.mod(21):  Reading nostruct-align/1dmmA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-23876/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dmmA/nostruct-align/1dmmA.t2k-w0.5.mod (nostruct-align/1dmmA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dmmA/nostruct-align/1dmmA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.679852
/projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t2k-w0.5.mod(22):  Reading nostruct-align/2pgd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc22-6690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t2k-w0.5.mod (nostruct-align/2pgd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.107866
/projects/compbio/experiments/models.97/pdb/1e/1ek1A/nostruct-align/1ek1A.t2k-w0.5.mod(21):  Reading nostruct-align/1ek1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc74-21221/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ek1A/nostruct-align/1ek1A.t2k-w0.5.mod (nostruct-align/1ek1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1ek1A/nostruct-align/1ek1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.990892
/projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-w0.5.mod(22):  Reading nostruct-align/1cxqA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-6872/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-w0.5.mod (nostruct-align/1cxqA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.797880
/projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t2k-w0.5.mod(21):  Reading nostruct-align/2pgi.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc15-21215/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t2k-w0.5.mod (nostruct-align/2pgi.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.328867
/projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t2k-w0.5.mod(22):  Reading nostruct-align/1tl2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-6259/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t2k-w0.5.mod (nostruct-align/1tl2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.006884
/projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t2k-w0.5.mod(21):  Reading nostruct-align/1tam.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-482/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t2k-w0.5.mod (nostruct-align/1tam.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.807854
/projects/compbio/experiments/models.97/pdb/1q/1qgpA/nostruct-align/1qgpA.t2k-w0.5.mod(21):  Reading nostruct-align/1qgpA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc08-29477/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qgpA/nostruct-align/1qgpA.t2k-w0.5.mod (nostruct-align/1qgpA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qgpA/nostruct-align/1qgpA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.310883
/projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-w0.5.mod(22):  Reading nostruct-align/1fg7A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-25760/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-w0.5.mod (nostruct-align/1fg7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fg7A/nostruct-align/1fg7A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.049898
/projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t2k-w0.5.mod(21):  Reading nostruct-align/1tap.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc10-31882/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t2k-w0.5.mod (nostruct-align/1tap.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.651861
/projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t2k-w0.5.mod(21):  Reading nostruct-align/1taq.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc89-17249/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t2k-w0.5.mod (nostruct-align/1taq.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -26.926867
/projects/compbio/experiments/models.97/pdb/1d/1dv5A/nostruct-align/1dv5A.t2k-w0.5.mod(21):  Reading nostruct-align/1dv5A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-18740/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dv5A/nostruct-align/1dv5A.t2k-w0.5.mod (nostruct-align/1dv5A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dv5A/nostruct-align/1dv5A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.019855
/projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t2k-w0.5.mod(21):  Reading nostruct-align/1sw6A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc34-10204/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t2k-w0.5.mod (nostruct-align/1sw6A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -29.571909
/projects/compbio/experiments/models.97/pdb/1d/1dtwB/nostruct-align/1dtwB.t2k-w0.5.mod(22):  Reading nostruct-align/1dtwB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc53-15443/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dtwB/nostruct-align/1dtwB.t2k-w0.5.mod (nostruct-align/1dtwB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dtwB/nostruct-align/1dtwB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.379864
/projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t2k-w0.5.mod(21):  Reading nostruct-align/1cbuA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc86-3827/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t2k-w0.5.mod (nostruct-align/1cbuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.902901
/projects/compbio/experiments/models.97/pdb/1f/1f45B/nostruct-align/1f45B.t2k-w0.5.mod(22):  Reading nostruct-align/1f45B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc50-12306/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f45B/nostruct-align/1f45B.t2k-w0.5.mod (nostruct-align/1f45B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f45B/nostruct-align/1f45B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.124880
/projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t2k-w0.5.mod(21):  Reading nostruct-align/1cd3B.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc73-30856/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t2k-w0.5.mod (nostruct-align/1cd3B.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.613878
/projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t2k-w0.5.mod(21):  Reading nostruct-align/1prtA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-9900/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t2k-w0.5.mod (nostruct-align/1prtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.207855
/projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t2k-w0.5.mod(21):  Reading nostruct-align/1prtD.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc44-29560/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t2k-w0.5.mod (nostruct-align/1prtD.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.160906
/projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t2k-w0.5.mod(22):  Reading nostruct-align/1qp8A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-26096/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t2k-w0.5.mod (nostruct-align/1qp8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.209864
/projects/compbio/experiments/models.97/pdb/1e/1e6qM/nostruct-align/1e6qM.t2k-w0.5.mod(21):  Reading nostruct-align/1e6qM.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc46-16863/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1e6qM/nostruct-align/1e6qM.t2k-w0.5.mod (nostruct-align/1e6qM.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1e6qM/nostruct-align/1e6qM.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.682878
/projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t2k-w0.5.mod(21):  Reading nostruct-align/1prtF.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-29369/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t2k-w0.5.mod (nostruct-align/1prtF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.741911
/projects/compbio/experiments/models.97/pdb/1j/1j9jA/nostruct-align/1j9jA.t2k-w0.5.mod(21):  Reading nostruct-align/1j9jA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-28106/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9jA/nostruct-align/1j9jA.t2k-w0.5.mod (nostruct-align/1j9jA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1j/1j9jA/nostruct-align/1j9jA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.938858
/projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t2k-w0.5.mod(22):  Reading nostruct-align/1d3bA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-12657/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t2k-w0.5.mod (nostruct-align/1d3bA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.895899
/projects/compbio/experiments/models.97/pdb/1q/1qvcA/nostruct-align/1qvcA.t2k-w0.5.mod(21):  Reading nostruct-align/1qvcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-30525/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1q/1qvcA/nostruct-align/1qvcA.t2k-w0.5.mod (nostruct-align/1qvcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1q/1qvcA/nostruct-align/1qvcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.222897
/projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t2k-w0.5.mod(22):  Reading nostruct-align/1d3bB.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-13123/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t2k-w0.5.mod (nostruct-align/1d3bB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.810907
/projects/compbio/experiments/models.97/pdb/1i/1iatA/nostruct-align/1iatA.t2k-w0.5.mod(22):  Reading nostruct-align/1iatA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc25-10945/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1iatA/nostruct-align/1iatA.t2k-w0.5.mod (nostruct-align/1iatA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1iatA/nostruct-align/1iatA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.126894
/projects/compbio/experiments/models.97/pdb/1i/1ic2A/nostruct-align/1ic2A.t2k-w0.5.mod(21):  Reading nostruct-align/1ic2A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc45-23355/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ic2A/nostruct-align/1ic2A.t2k-w0.5.mod (nostruct-align/1ic2A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1i/1ic2A/nostruct-align/1ic2A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -19.418850
/projects/compbio/experiments/models.97/pdb/1g/1gr0A/nostruct-align/1gr0A.t2k-w0.5.mod(22):  Reading nostruct-align/1gr0A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-30530/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1gr0A/nostruct-align/1gr0A.t2k-w0.5.mod (nostruct-align/1gr0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1gr0A/nostruct-align/1gr0A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.309902
/projects/compbio/experiments/models.97/pdb/1t/1tbd/nostruct-align/1tbd.t2k-w0.5.mod(21):  Reading nostruct-align/1tbd.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-25723/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbd/nostruct-align/1tbd.t2k-w0.5.mod (nostruct-align/1tbd.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tbd/nostruct-align/1tbd.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -20.483889
/projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t2k-w0.5.mod(22):  Reading nostruct-align/1x11A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-9815/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t2k-w0.5.mod (nostruct-align/1x11A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.330860
/projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t2k-w0.5.mod(21):  Reading nostruct-align/1lyp.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc66-11596/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t2k-w0.5.mod (nostruct-align/1lyp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.226866
/projects/compbio/experiments/models.97/pdb/2p/2phh/nostruct-align/2phh.t2k-w0.5.mod(21):  Reading nostruct-align/2phh.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc05-26797/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2phh/nostruct-align/2phh.t2k-w0.5.mod (nostruct-align/2phh.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2phh/nostruct-align/2phh.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.038906
/projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t2k-w0.5.mod(21):  Reading nostruct-align/1tbn.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc96-5456/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t2k-w0.5.mod (nostruct-align/1tbn.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.905909
/projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t2k-w0.5.mod(21):  Reading nostruct-align/1b3nA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc78-19415/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t2k-w0.5.mod (nostruct-align/1b3nA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.174860
/projects/compbio/experiments/models.97/pdb/1f/1fezA/nostruct-align/1fezA.t2k-w0.5.mod(22):  Reading nostruct-align/1fezA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-909/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fezA/nostruct-align/1fezA.t2k-w0.5.mod (nostruct-align/1fezA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fezA/nostruct-align/1fezA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.210899
/projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-w0.5.mod(22):  Reading nostruct-align/1f46A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-19970/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-w0.5.mod (nostruct-align/1f46A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1f46A/nostruct-align/1f46A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.217859
/projects/compbio/experiments/models.97/pdb/1o/1ovoA/nostruct-align/1ovoA.t2k-w0.5.mod(21):  Reading nostruct-align/1ovoA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc18-4574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1o/1ovoA/nostruct-align/1ovoA.t2k-w0.5.mod (nostruct-align/1ovoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1o/1ovoA/nostruct-align/1ovoA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.970856
/projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k-w0.5.mod(21):  Reading nostruct-align/1fmcA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc02-26266/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k-w0.5.mod (nostruct-align/1fmcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1f/1fmcA/nostruct-align/1fmcA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -22.704853
/projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t2k-w0.5.mod(21):  Reading nostruct-align/2phy.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc82-19312/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t2k-w0.5.mod (nostruct-align/2phy.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.144882
/projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-w0.5.mod(22):  Reading nostruct-align/1g6gA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc36-30827/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-w0.5.mod (nostruct-align/1g6gA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1g/1g6gA/nostruct-align/1g6gA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.413883
/projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t2k-w0.5.mod(21):  Reading nostruct-align/1dfeA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc77-25874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t2k-w0.5.mod (nostruct-align/1dfeA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -17.413891
/projects/compbio/experiments/models.97/pdb/1d/1d3cA/nostruct-align/1d3cA.t2k-w0.5.mod(22):  Reading nostruct-align/1d3cA.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-28045/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1d3cA/nostruct-align/1d3cA.t2k-w0.5.mod (nostruct-align/1d3cA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1d/1d3cA/nostruct-align/1d3cA.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.713902
/projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t2k-w0.5.mod(21):  Reading nostruct-align/1eps.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-2177/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t2k-w0.5.mod (nostruct-align/1eps.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -24.816891
/projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-w0.5.mod(22):  Reading nostruct-align/1tca.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc72-25860/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-w0.5.mod (nostruct-align/1tca.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -23.892893
/projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t2k-w0.5.mod(21):  Reading nostruct-align/2pia.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc79-30864/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t2k-w0.5.mod (nostruct-align/2pia.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -25.622887
/projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t2k-w0.5.mod(22):  Reading nostruct-align/2pii.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc26-14111/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t2k-w0.5.mod (nostruct-align/2pii.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.131887
/projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t2k-w0.5.mod(21):  Reading nostruct-align/1cz1A.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc88-9820/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t2k-w0.5.mod (nostruct-align/1cz1A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -21.423901
/projects/compbio/experiments/models.97/pdb/6h/6hir/nostruct-align/6hir.t2k-w0.5.mod(21):  Reading nostruct-align/6hir.t2k-w0.5-db model number 1 from MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc67-741/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/6h/6hir/nostruct-align/6hir.t2k-w0.5.mod (nostruct-align/6hir.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
% Subsequence-submodel (local) (SW = 2)
% Simple scores adjusted by ln(seq len) (adjust_score = 2)
% Single Track Model:  /projects/compbio/experiments/models.97/pdb/6h/6hir/nostruct-align/6hir.t2k-w0.5.mod
.
Average NLL-Simple NULL score:        -18.342854
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/strip_comments < T0136-1-290-template-lib.dist-rdb > T0136-1-290-template-lib-sorted.rdb.tmp1
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/shorten_mod_names < T0136-1-290-template-lib-sorted.rdb.tmp1 > T0136-1-290-template-lib-sorted.rdb.tmp2
/projects/compbio/bin/sorttbl EVALUE < T0136-1-290-template-lib-sorted.rdb.tmp2 > T0136-1-290-template-lib-sorted.rdb
rm -f T0136-1-290-template-lib-sorted.rdb.tmp1
rm -f T0136-1-290-template-lib-sorted.rdb.tmp2
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/annotate_template_scores  < T0136-1-290-template-lib-sorted.rdb > T0136-1-290-template-lib-scores.rdb
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136-1-290-template-lib-scores < T0136-1-290-template-lib-scores.rdb > T0136-1-290-template-lib-scores.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated template model scores" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290-template-lib-scores.html \
	T0136-1-290-template-lib-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Top Hits" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/casp5/scripts-human/best_scores T0136-1-290.t2k-100-30-dssp-ebghstl-scores.rdb T0136-1-290-template-lib-scores.rdb T0136-1-290.t2k-w0.5-scores.rdb T0136-1-290.t2k-100-30-stride-ebghtl-scores.rdb > tmp.best.rdb
Invalid input file: T0136-1-290.t2k-100-30-dssp-ebghstl-scores.rdb, unrecognized type 1-290.t2k-100-30-dssp-ebghstl
make: *** [T0136-1-290.best-scores.rdb] Error 255
/projects/compbio/experiments/casp5/scripts-human/create_summary_html \
T0136-1-290 file:/projects/compbio/experiments/casp5/t0136-1-290 > /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_master_table_head_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
Inputs >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
echo Received sequence T0136-1-290.a2m
Received sequence T0136-1-290.a2m
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Submitted sequence(s)" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.a2m T0136-1-290.a2m >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 multiple alignment in a2m format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.a2m.gz T0136-1-290.t2k.a2m.gz >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 multiple alignment in pretty html format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k.pa.html T0136-1-290.t2k.pa.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 target hidden Markov model" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-w0.5.mod T0136-1-290.t2k-w0.5.mod >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Secondary Structure Prediction" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Sequence Logos" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"SAM_T02 multiple alignment in sequence logo format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290-w0.5-logo.eps T0136-1-290-w0.5-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"DSSP EBGHSTL structure prediction in sequence logo format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290-dssp-ebghstl-logo.eps T0136-1-290-dssp-ebghstl-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Stride EBGHTL structure prediction in sequence logo format" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290-stride-ebghtl-logo.eps T0136-1-290-stride-ebghtl-logo.eps >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Target model scores" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated amino acid/DSSP EBGHSTL two-track target model scores" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl-scores.html \
	T0136-1-290.t2k-100-30-dssp-ebghstl-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated amino acid/STRIDE EBGHTL two-track target model scores" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl-scores.html \
	T0136-1-290.t2k-100-30-stride-ebghtl-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated amino acid single-track target model scores of PDB" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.t2k-w0.5-scores.html \
	T0136-1-290.t2k-w0.5-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Template model scores" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Annotated template model scores" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.template-lib-scores.html \
	T0136-1-290.template-lib-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Top Hits" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/casp5/scripts-human/best_scores T0136-1-290.t2k-100-30-dssp-ebghstl-scores.rdb T0136-1-290.template-lib-scores.rdb T0136-1-290.t2k-w0.5-scores.rdb T0136-1-290.t2k-100-30-stride-ebghtl-scores.rdb > tmp.best.rdb
/projects/compbio/bin/sorttbl Evalue < tmp.best.rdb > tmp.sorted.rdb
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/best_score_filter 30 < tmp.sorted.rdb > T0136-1-290.best-scores.rdb
rm -f tmp.best.rdb
rm -f tmp.sorted.rdb
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/oneway_hits_rdb2html T0136-1-290.best_hits < T0136-1-290.best-scores.rdb > T0136-1-290.best-scores.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_summary_html \
"Best scoring hits from all models" \
	file:/projects/compbio/experiments/casp5/t0136-1-290/T0136-1-290.best-scores.html \
	T0136-1-290.best-scores.html >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/end_section_summary_html \
>> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/add_section_head_summary_html \
"Alignments for Top Hits" >> /projects/compbio/experiments/casp5/t0136/t0136-1-290/summary.html
/projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/modelfromalign T0136-1-290 \
-alignfile T0136-1-290.a2m \
-insert /projects/compbio/lib/fssp-trained.regularizer \
                -aweight_bits 0.8\
                -fimtrans -1\
        -fimstrength 1\
        -ins_jump_conf 1 \
        -match_jump_conf 1 \
        -del_jump_conf 1 \
        -binary_output 1\
        -prior_library /projects/compbio/lib/recode3.20comp \
        -a2mdots 0 \
        -a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
        -aweight_method 1\
        -aweight_exponent 10 
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/modelfromalign v3.3.1 (December 20, 2001) compiled 04/11/02_15:34:16
Reading alignment file T0136-1-290.a2m (1 sequence, 290 columns) as A2M alignment.
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/get_t2k_lib_hits < T0136-1-290.best-scores.rdb > T0136-1-290-top_hits_t2k
/projects/compbio/experiments/protein-predict/SAM_T02/scripts/get_non_t2k_lib_hits < T0136-1-290.best-scores.rdb > T0136-1-290-top_hits_non_t2k
/projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments /projects/compbio/experiments/casp5/t0136/t0136-1-290 \
file:/projects/compbio/experiments/casp5/t0136-1-290 T0136-1-290 T0136-1-290.t2k.dssp-ebghstl.mod T0136-1-290.t2k.stride-ebghtl.mod T0136-1-290.t2k-w0.5.mlib T0136-1-290.t2k-100-30-dssp-ebghstl.mlib T0136-1-290.t2k-100-30-stride-ebghtl.mlib < T0136-1-290-top_hits_t2k > T0136-1-290-top_hits_t2k_pwise_alignments.rdb
Name "main::lln" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 38.
Name "main::BASEURL" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 18.
Name "main::PDB_DB" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 32.
Name "main::T02_SCRIPTS" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 27.
Name "main::makefile" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 61.
Name "main::T2K_ID_FILE" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 24.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1cec


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.862885
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.217926
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.797104
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.282623
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.870689
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.408707
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/1cec-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.007202
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/1cec-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/1cec-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.146187
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/1cec-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.081688
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.607193
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/1cec-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Replacing nostruct-align/1cec.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod (nostruct-align/1cec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.023163
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/1cec-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/1cec-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Replacing nostruct-align/1cec.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod (nostruct-align/1cec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.288185
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/1cec-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.814697
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.867706
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.862885
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1cec/T0136-1-290-1cec-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.771179
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.797104
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1cec/T0136-1-290-1cec-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -162.810440
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.870689
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/1cec-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.007202
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/1cec-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.081688
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/1cec-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod(21):  Replacing nostruct-align/1cec.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc19-7228/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t2k-w0.5.mod (nostruct-align/1cec.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.023163
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/1cec-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1cec/T0136-1-290-1cec-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1cec/info/1cec.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.814697
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1cec/T0136-1-290-1cec-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dosA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.875458
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.875458
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.471298
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.471298
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.381790
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.381790
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/1dosA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.963806
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/1dosA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/1dosA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.963806
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/1dosA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.562759
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.562759
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/1dosA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Replacing nostruct-align/1dosA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod (nostruct-align/1dosA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.766785
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/1dosA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/1dosA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Replacing nostruct-align/1dosA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod (nostruct-align/1dosA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.766785
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/1dosA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -247.108795
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -247.108795
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.875458
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1dosA/T0136-1-290-1dosA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -157.666138
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.471298
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1dosA/T0136-1-290-1dosA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -155.985977
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.381790
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/1dosA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.963806
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/1dosA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.562759
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/1dosA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod(22):  Replacing nostruct-align/1dosA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc58-1320/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t2k-w0.5.mod (nostruct-align/1dosA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.766785
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/1dosA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/T0136-1-290-1dosA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -247.108795
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/T0136-1-290-1dosA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dosA/1dosA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dosA/struct-align/1dosA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dosA/info/1dosA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/struct-align/1dosA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/struct-align/1dosA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-29774/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dosA/struct-align/1dosA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -91.542007
Database has 2 sequences with 648 residues.


@@@@ gzip -f 1dosA/1dosA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1j9yA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.941345
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.259857
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.341217
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.321716
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.641449
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.641449
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -134.419937
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/1j9yA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -134.940430
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/1j9yA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.568451
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.691437
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Replacing nostruct-align/1j9yA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -138.117935
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/1j9yA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Replacing nostruct-align/1j9yA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -138.689453
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/1j9yA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.631973
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.760941
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.941345
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1j9yA/T0136-1-290-1j9yA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -160.799377
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.341217
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1j9yA/T0136-1-290-1j9yA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -160.414276
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.641449
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -134.419937
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/1j9yA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.568451
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod(22):  Replacing nostruct-align/1j9yA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-30775/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/nostruct-align/1j9yA.t2k-w0.5.mod (nostruct-align/1j9yA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -138.117935
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/1j9yA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/T0136-1-290-1j9yA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.631973
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/T0136-1-290-1j9yA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j9yA/1j9yA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j9yA/info/1j9yA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-13933/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j9yA/struct-align/1j9yA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -91.929977
Database has 2 sequences with 675 residues.


@@@@ gzip -f 1j9yA/1j9yA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1ejjA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.416168
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.414215
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.945541
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.944504
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.248352
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.248352
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/1ejjA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -232.847366
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/1ejjA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/1ejjA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -232.847366
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/1ejjA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.959351
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.960388
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/1ejjA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Replacing nostruct-align/1ejjA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod (nostruct-align/1ejjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -237.441879
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/1ejjA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/1ejjA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Replacing nostruct-align/1ejjA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod (nostruct-align/1ejjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -237.442368
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/1ejjA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.998367
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.998856
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.416168
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ejjA/T0136-1-290-1ejjA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.741333
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.945541
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ejjA/T0136-1-290-1ejjA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.583145
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.248352
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/1ejjA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -232.847366
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/1ejjA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.959351
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/1ejjA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod(21):  Replacing nostruct-align/1ejjA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-24646/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/nostruct-align/1ejjA.t2k-w0.5.mod (nostruct-align/1ejjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -237.441879
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/1ejjA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/T0136-1-290-1ejjA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.998367
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/T0136-1-290-1ejjA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ejjA/1ejjA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ejjA/struct-align/1ejjA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ejjA/info/1ejjA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejjA/struct-align/1ejjA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejjA/struct-align/1ejjA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-915/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ejjA/struct-align/1ejjA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -294.039032
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1ejjA/1ejjA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1hnoA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.239975
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.108475
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.507538
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.374527
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.755669
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.755669
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -76.072670
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/1hnoA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -75.551643
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/1hnoA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.024651
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.969658
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Replacing nostruct-align/1hnoA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -81.720161
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/1hnoA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Replacing nostruct-align/1hnoA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -81.175667
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/1hnoA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.759659
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.859650
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.239975
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1hnoA/T0136-1-290-1hnoA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -161.350815
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.507538
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1hnoA/T0136-1-290-1hnoA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.266342
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.755669
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -76.072670
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/1hnoA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.024651
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod(21):  Replacing nostruct-align/1hnoA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc51-2842/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/nostruct-align/1hnoA.t2k-w0.5.mod (nostruct-align/1hnoA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -81.720161
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/1hnoA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/T0136-1-290-1hnoA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.759659
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/T0136-1-290-1hnoA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnoA/1hnoA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnoA/info/1hnoA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-10786/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnoA/struct-align/1hnoA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.502495
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnoA/1hnoA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1rpxA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.634521
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.634521
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.047958
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.047958
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.158012
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.158012
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -112.355019
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/1rpxA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -112.355019
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/1rpxA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.322502
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.322502
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Replacing nostruct-align/1rpxA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.999031
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/1rpxA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Replacing nostruct-align/1rpxA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.999031
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/1rpxA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.456024
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.456024
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.634521
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1rpxA/T0136-1-290-1rpxA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.868011
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.047958
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1rpxA/T0136-1-290-1rpxA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -157.564438
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.158012
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -112.355019
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/1rpxA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.322502
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod(22):  Replacing nostruct-align/1rpxA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc60-11855/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t2k-w0.5.mod (nostruct-align/1rpxA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.999031
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/1rpxA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/T0136-1-290-1rpxA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.456024
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/T0136-1-290-1rpxA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1rpxA/1rpxA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1r/1rpxA/info/1rpxA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-23779/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1r/1rpxA/struct-align/1rpxA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -62.104507
Database has 2 sequences with 520 residues.


@@@@ gzip -f 1rpxA/1rpxA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1ii7A


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.848297
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.848297
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.942657
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.942657
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.143494
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.143494
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/1ii7A-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -127.608490
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/1ii7A-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/1ii7A-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -127.608490
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/1ii7A-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.321991
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.321991
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/1ii7A-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Replacing nostruct-align/1ii7A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod (nostruct-align/1ii7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -131.649994
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/1ii7A-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/1ii7A-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Replacing nostruct-align/1ii7A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod (nostruct-align/1ii7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -131.649994
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/1ii7A-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.776001
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.776001
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.848297
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ii7A/T0136-1-290-1ii7A-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -160.243774
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.942657
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ii7A/T0136-1-290-1ii7A-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.360657
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.143494
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/1ii7A-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -127.608490
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/1ii7A-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.321991
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/1ii7A-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod(22):  Replacing nostruct-align/1ii7A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc87-1026/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/nostruct-align/1ii7A.t2k-w0.5.mod (nostruct-align/1ii7A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -131.649994
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/1ii7A-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/T0136-1-290-1ii7A-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.776001
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/T0136-1-290-1ii7A-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ii7A/1ii7A-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1i/1ii7A/struct-align/1ii7A.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1i/1ii7A/info/1ii7A.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ii7A/struct-align/1ii7A.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ii7A/struct-align/1ii7A.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-13188/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1i/1ii7A/struct-align/1ii7A.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -176.334488
Database has 2 sequences with 623 residues.


@@@@ gzip -f 1ii7A/1ii7A-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1bw0A


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.321960
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.321411
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.992157
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.992706
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.435242
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.435249
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/1bw0A-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.004211
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/1bw0A-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/1bw0A-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.004227
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/1bw0A-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.608704
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.609688
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/1bw0A-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Replacing nostruct-align/1bw0A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod (nostruct-align/1bw0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -133.399200
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/1bw0A-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/1bw0A-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Replacing nostruct-align/1bw0A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod (nostruct-align/1bw0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -133.399704
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/1bw0A-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.260239
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.260239
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.321960
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1bw0A/T0136-1-290-1bw0A-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.034195
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.992157
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1bw0A/T0136-1-290-1bw0A-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.512482
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.435242
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/1bw0A-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.004211
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/1bw0A-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.608704
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/1bw0A-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod(22):  Replacing nostruct-align/1bw0A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-28742/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t2k-w0.5.mod (nostruct-align/1bw0A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -133.399200
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/1bw0A-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/T0136-1-290-1bw0A-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.260239
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/T0136-1-290-1bw0A-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bw0A/1bw0A-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bw0A/struct-align/1bw0A.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bw0A/info/1bw0A.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/struct-align/1bw0A.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/struct-align/1bw0A.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-22560/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bw0A/struct-align/1bw0A.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -155.925995
Database has 2 sequences with 706 residues.


@@@@ gzip -f 1bw0A/1bw0A-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.783279
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.783279
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.968185
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.968185
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.299179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.299179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -104.355179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/1dciA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -104.355179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/1dciA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.167679
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.167679
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Replacing nostruct-align/1dciA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -108.603165
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/1dciA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Replacing nostruct-align/1dciA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -108.603165
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/1dciA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.754166
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.754166
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.783279
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1dciA/T0136-1-290-1dciA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -156.497086
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.968185
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1dciA/T0136-1-290-1dciA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -156.377502
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.299179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -104.355179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/1dciA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.167679
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod(22):  Replacing nostruct-align/1dciA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc49-2574/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t2k-w0.5.mod (nostruct-align/1dciA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -108.603165
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/1dciA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/T0136-1-290-1dciA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.754166
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/T0136-1-290-1dciA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciA/1dciA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1d/1dciA/info/1dciA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-28040/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1d/1dciA/struct-align/1dciA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -140.474503
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciA/1dciA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/7odcA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.899734
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.187271
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.223282
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.022278
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.161690
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -114.594185
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/7odcA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.116699
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/7odcA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/7odcA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.298187
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/7odcA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.664192
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.649658
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/7odcA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Replacing nostruct-align/7odcA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod (nostruct-align/7odcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.080688
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/7odcA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/7odcA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Replacing nostruct-align/7odcA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod (nostruct-align/7odcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -168.356689
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/7odcA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.670227
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.761215
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.899734
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 7odcA/T0136-1-290-7odcA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -155.656082
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.223282
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 7odcA/T0136-1-290-7odcA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -154.233582
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.161690
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/7odcA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.116699
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/7odcA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.664192
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/7odcA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod(22):  Replacing nostruct-align/7odcA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-4249/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t2k-w0.5.mod (nostruct-align/7odcA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.080688
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/7odcA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 7odcA/T0136-1-290-7odcA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/7o/7odcA/info/7odcA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.670227
Database has 2 sequences with 714 residues.


@@@@ gzip -f 7odcA/T0136-1-290-7odcA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1b8oA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.246338
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.041336
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.114365
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.729858
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.275063
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.275085
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/1b8oA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.575577
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/1b8oA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/1b8oA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.575592
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/1b8oA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.494057
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.496063
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/1b8oA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Replacing nostruct-align/1b8oA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod (nostruct-align/1b8oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -132.362595
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/1b8oA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/1b8oA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Replacing nostruct-align/1b8oA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod (nostruct-align/1b8oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -132.363098
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/1b8oA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.766068
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.766083
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.246338
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1b8oA/T0136-1-290-1b8oA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -160.988251
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.114365
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1b8oA/T0136-1-290-1b8oA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.368820
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.275063
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/1b8oA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.575577
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/1b8oA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.494057
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/1b8oA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod(22):  Replacing nostruct-align/1b8oA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc39-30330/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t2k-w0.5.mod (nostruct-align/1b8oA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -132.362595
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/1b8oA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/T0136-1-290-1b8oA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.766068
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/T0136-1-290-1b8oA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1b8oA/1b8oA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1b8oA/struct-align/1b8oA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1b8oA/info/1b8oA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/struct-align/1b8oA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/struct-align/1b8oA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-18213/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1b8oA/struct-align/1b8oA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -134.179504
Database has 2 sequences with 574 residues.


@@@@ gzip -f 1b8oA/1b8oA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1ceo


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -171.342316
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.650818
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.502579
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.861053
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.818192
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.356178
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.419205
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/1ceo-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.584709
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/1ceo-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.029190
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.554695
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Replacing nostruct-align/1ceo.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.300186
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/1ceo-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Replacing nostruct-align/1ceo.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.536186
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/1ceo-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.815704
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.866180
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -171.342316
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ceo/T0136-1-290-1ceo-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.551086
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.502579
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ceo/T0136-1-290-1ceo-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.178879
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.818192
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.419205
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/1ceo-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.029190
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod(21):  Replacing nostruct-align/1ceo.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc28-8314/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t2k-w0.5.mod (nostruct-align/1ceo.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.300186
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/1ceo-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/T0136-1-290-1ceo-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.815704
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/T0136-1-290-1ceo-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ceo/1ceo-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1c/1ceo/info/1ceo.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-24536/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1c/1ceo/struct-align/1ceo.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -97.958496
Database has 2 sequences with 633 residues.


@@@@ gzip -f 1ceo/1ceo-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1j8mF


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.080765
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.080246
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.801849
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.800858
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.906204
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.906212
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/1j8mF-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.963196
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/1j8mF-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/1j8mF-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.963196
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/1j8mF-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.806198
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.809685
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/1j8mF-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Replacing nostruct-align/1j8mF.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod (nostruct-align/1j8mF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.569702
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/1j8mF-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/1j8mF-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Replacing nostruct-align/1j8mF.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod (nostruct-align/1j8mF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.568695
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/1j8mF-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.280685
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.281708
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.080765
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1j8mF/T0136-1-290-1j8mF-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.202057
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.801849
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1j8mF/T0136-1-290-1j8mF-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -162.863663
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.906204
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/1j8mF-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.963196
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/1j8mF-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.806198
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/1j8mF-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod(22):  Replacing nostruct-align/1j8mF.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc23-22709/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1j/1j8mF/nostruct-align/1j8mF.t2k-w0.5.mod (nostruct-align/1j8mF.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.569702
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/1j8mF-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1j8mF/T0136-1-290-1j8mF-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1j/1j8mF/info/1j8mF.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.280685
Database has 2 sequences with 587 residues.


@@@@ gzip -f 1j8mF/T0136-1-290-1j8mF-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1k3fA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.834869
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.834869
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.775726
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.775726
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.834854
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.834854
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/1k3fA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -99.398392
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/1k3fA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/1k3fA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -99.398392
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/1k3fA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.394363
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.394363
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/1k3fA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Replacing nostruct-align/1k3fA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod (nostruct-align/1k3fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -103.798874
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/1k3fA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/1k3fA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Replacing nostruct-align/1k3fA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod (nostruct-align/1k3fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -103.798874
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/1k3fA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.601868
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.601868
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.834869
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1k3fA/T0136-1-290-1k3fA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -156.883514
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.775726
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1k3fA/T0136-1-290-1k3fA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -154.466354
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.834854
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/1k3fA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -99.398392
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/1k3fA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.394363
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/1k3fA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod(21):  Replacing nostruct-align/1k3fA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc71-15168/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1k/1k3fA/nostruct-align/1k3fA.t2k-w0.5.mod (nostruct-align/1k3fA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -103.798874
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/1k3fA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1k3fA/T0136-1-290-1k3fA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1k/1k3fA/info/1k3fA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.601868
Database has 2 sequences with 543 residues.


@@@@ gzip -f 1k3fA/T0136-1-290-1k3fA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/3pnp


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.155914
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.518143
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.266357
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/3pnp-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.508858
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/3pnp-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.480835
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/3pnp-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22):  Replacing nostruct-align/3pnp.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod (nostruct-align/3pnp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -126.056862
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/3pnp-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.756363
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.155914
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 3pnp/T0136-1-290-3pnp-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -161.608536
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.518143
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 3pnp/T0136-1-290-3pnp-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.574799
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.266357
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/3pnp-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.508858
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/3pnp-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.480835
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/3pnp-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod(22):  Replacing nostruct-align/3pnp.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc76-6874/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/3p/3pnp/nostruct-align/3pnp.t2k-w0.5.mod (nostruct-align/3pnp.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -126.056862
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/3pnp-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 3pnp/T0136-1-290-3pnp-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/3p/3pnp/info/3pnp.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.756363
Database has 2 sequences with 579 residues.


@@@@ gzip -f 3pnp/T0136-1-290-3pnp-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1mil


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.011078
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.011078
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.625168
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.625168
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -112.864372
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -112.864372
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/1mil-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.259880
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/1mil-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/1mil-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.259880
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/1mil-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.152855
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.152855
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/1mil-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Replacing nostruct-align/1mil.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod (nostruct-align/1mil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -46.260872
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/1mil-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/1mil-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Replacing nostruct-align/1mil.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod (nostruct-align/1mil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -46.260872
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/1mil-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.502350
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.502350
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.011078
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1mil/T0136-1-290-1mil-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.233688
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.625168
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1mil/T0136-1-290-1mil-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -156.073807
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -112.864372
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/1mil-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.259880
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/1mil-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.152855
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/1mil-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod(21):  Replacing nostruct-align/1mil.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc13-23881/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1m/1mil/nostruct-align/1mil.t2k-w0.5.mod (nostruct-align/1mil.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -46.260872
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/1mil-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1mil/T0136-1-290-1mil-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1m/1mil/info/1mil.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.502350
Database has 2 sequences with 394 residues.


@@@@ gzip -f 1mil/T0136-1-290-1mil-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1hnuA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -171.099136
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -170.968124
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.623459
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.489975
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.755669
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.755669
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -76.488167
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/1hnuA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -75.945160
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/1hnuA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.024651
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.969658
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Replacing nostruct-align/1hnuA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -81.735664
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/1hnuA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Replacing nostruct-align/1hnuA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -81.202667
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/1hnuA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.759659
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.859650
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -171.099136
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1hnuA/T0136-1-290-1hnuA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -161.443954
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.623459
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1hnuA/T0136-1-290-1hnuA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.109818
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -116.755669
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -76.488167
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/1hnuA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.024651
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/1hnuA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod(21):  Replacing nostruct-align/1hnuA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc70-30279/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hnuA/nostruct-align/1hnuA.t2k-w0.5.mod (nostruct-align/1hnuA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -81.735664
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/1hnuA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hnuA/T0136-1-290-1hnuA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hnuA/info/1hnuA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.759659
Database has 2 sequences with 570 residues.


@@@@ gzip -f 1hnuA/T0136-1-290-1hnuA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1ef8A


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.703812
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.805328
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.545120
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.655594
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.091309
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.091286
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -90.990311
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/1ef8A-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -90.939301
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/1ef8A-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.358276
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.364296
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Replacing nostruct-align/1ef8A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -95.800797
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/1ef8A-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Replacing nostruct-align/1ef8A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -95.753784
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/1ef8A-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.507797
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.437790
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.703812
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ef8A/T0136-1-290-1ef8A-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -161.331009
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.545120
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1ef8A/T0136-1-290-1ef8A-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -160.215317
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.091309
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -90.990311
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/1ef8A-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.358276
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod(21):  Replacing nostruct-align/1ef8A.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc85-26271/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/nostruct-align/1ef8A.t2k-w0.5.mod (nostruct-align/1ef8A.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -95.800797
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/1ef8A-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/T0136-1-290-1ef8A-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.507797
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/T0136-1-290-1ef8A-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1ef8A/1ef8A-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1ef8A/info/1ef8A.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-32684/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1ef8A/struct-align/1ef8A.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -130.042007
Database has 2 sequences with 551 residues.


@@@@ gzip -f 1ef8A/1ef8A-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1lucB


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.180023
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.180008
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.578644
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.578644
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.130188
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.130180
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/1lucB-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.820702
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/1lucB-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/1lucB-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.820686
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/1lucB-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.396667
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.397179
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/1lucB-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Replacing nostruct-align/1lucB.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod (nostruct-align/1lucB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.506668
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/1lucB-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/1lucB-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Replacing nostruct-align/1lucB.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod (nostruct-align/1lucB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.507172
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/1lucB-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.594193
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.594696
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.180023
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1lucB/T0136-1-290-1lucB-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -152.175293
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.578644
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1lucB/T0136-1-290-1lucB-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -150.344482
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.130188
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/1lucB-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.820702
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/1lucB-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.396667
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/1lucB-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod(21):  Replacing nostruct-align/1lucB.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc68-6690/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t2k-w0.5.mod (nostruct-align/1lucB.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -128.506668
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/1lucB-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1lucB/T0136-1-290-1lucB-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1l/1lucB/info/1lucB.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.594193
Database has 2 sequences with 614 residues.


@@@@ gzip -f 1lucB/T0136-1-290-1lucB-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1hzdA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -171.178772
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -171.318283
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.488297
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.532318
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.376671
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.376648
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -103.233154
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/1hzdA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -103.233147
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/1hzdA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.116661
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.124146
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Replacing nostruct-align/1hzdA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -107.620667
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/1hzdA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Replacing nostruct-align/1hzdA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -107.619682
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/1hzdA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.958160
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.958160
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -171.178772
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1hzdA/T0136-1-290-1hzdA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.438110
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.488297
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1hzdA/T0136-1-290-1hzdA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -155.535645
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.376671
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -103.233154
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/1hzdA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -122.116661
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/1hzdA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod(22):  Replacing nostruct-align/1hzdA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc62-9107/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1h/1hzdA/nostruct-align/1hzdA.t2k-w0.5.mod (nostruct-align/1hzdA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -107.620667
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/1hzdA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1hzdA/T0136-1-290-1hzdA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1h/1hzdA/info/1hzdA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.958160
Database has 2 sequences with 562 residues.


@@@@ gzip -f 1hzdA/T0136-1-290-1hzdA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1bmtA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.108810
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.108810
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.732559
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.732559
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -114.766388
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -114.766388
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/1bmtA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -108.693390
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/1bmtA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/1bmtA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -108.693390
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/1bmtA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.328888
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.328888
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/1bmtA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Replacing nostruct-align/1bmtA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod (nostruct-align/1bmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -111.931900
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/1bmtA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/1bmtA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Replacing nostruct-align/1bmtA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod (nostruct-align/1bmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -111.931900
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/1bmtA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.814896
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.814896
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.108810
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1bmtA/T0136-1-290-1bmtA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -160.085922
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.732559
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1bmtA/T0136-1-290-1bmtA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -159.854156
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -114.766388
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/1bmtA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -108.693390
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/1bmtA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.328888
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/1bmtA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod(21):  Replacing nostruct-align/1bmtA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc64-21521/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t2k-w0.5.mod (nostruct-align/1bmtA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -111.931900
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/1bmtA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/T0136-1-290-1bmtA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.814896
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/T0136-1-290-1bmtA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1bmtA/1bmtA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1b/1bmtA/struct-align/1bmtA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1b/1bmtA/info/1bmtA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/struct-align/1bmtA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/struct-align/1bmtA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-20493/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1b/1bmtA/struct-align/1bmtA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -92.399498
Database has 2 sequences with 536 residues.


@@@@ gzip -f 1bmtA/1bmtA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1fts


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.237350
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.237350
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.525574
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.525574
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.615074
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.615074
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/1fts-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.172066
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/1fts-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/1fts-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.172066
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/1fts-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.360069
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.360069
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/1fts-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Replacing nostruct-align/1fts.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod (nostruct-align/1fts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.291573
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/1fts-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/1fts-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Replacing nostruct-align/1fts.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod (nostruct-align/1fts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.291573
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/1fts-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.676086
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.676086
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -169.237350
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1fts/T0136-1-290-1fts-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -161.929260
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -167.525574
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1fts/T0136-1-290-1fts-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -160.463013
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.615074
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/1fts-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -119.172066
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/1fts-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.360069
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/1fts-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod(21):  Replacing nostruct-align/1fts.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc43-8870/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1f/1fts/nostruct-align/1fts.t2k-w0.5.mod (nostruct-align/1fts.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.291573
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/1fts-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1fts/T0136-1-290-1fts-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1f/1fts/info/1fts.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.676086
Database has 2 sequences with 585 residues.


@@@@ gzip -f 1fts/T0136-1-290-1fts-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1nzyA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.083084
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.083084
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.394836
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.394836
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.754204
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.754204
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -95.180710
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/1nzyA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -95.180710
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/1nzyA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.840202
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.840202
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Replacing nostruct-align/1nzyA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -99.431717
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/1nzyA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Replacing nostruct-align/1nzyA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -99.431717
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/1nzyA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.012695
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.012695
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -164.083084
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1nzyA/T0136-1-290-1nzyA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -152.238358
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.394836
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1nzyA/T0136-1-290-1nzyA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -149.898148
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -113.754204
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -95.180710
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/1nzyA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.840202
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod(21):  Replacing nostruct-align/1nzyA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc59-27351/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t2k-w0.5.mod (nostruct-align/1nzyA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -99.431717
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/1nzyA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/T0136-1-290-1nzyA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.012695
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/T0136-1-290-1nzyA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1nzyA/1nzyA-T0136-1-290-fssp-global-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1n/1nzyA/info/1nzyA.stride-mixed.seq  -adpstyle 5 -sw 0 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-17734/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1n/1nzyA/struct-align/1nzyA.fssp-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -136.104507
Database has 2 sequences with 559 residues.


@@@@ gzip -f 1nzyA/1nzyA-T0136-1-290-fssp-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 315, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1eqjA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.413681
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.412155
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.959106
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.957581
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.248352
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.248352
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/1eqjA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -237.579895
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/1eqjA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/1eqjA-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -237.579895
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/1eqjA-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.959351
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.960388
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/1eqjA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Replacing nostruct-align/1eqjA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod (nostruct-align/1eqjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -242.042877
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/1eqjA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/1eqjA-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Replacing nostruct-align/1eqjA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod (nostruct-align/1eqjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -242.042877
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/1eqjA-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.998367
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.998856
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.413681
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1eqjA/T0136-1-290-1eqjA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.731827
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -166.959106
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 1eqjA/T0136-1-290-1eqjA-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -158.642715
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -118.248352
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/1eqjA-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -237.579895
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/1eqjA-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.959351
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/1eqjA-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod(22):  Replacing nostruct-align/1eqjA.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc65-25362/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/1e/1eqjA/nostruct-align/1eqjA.t2k-w0.5.mod (nostruct-align/1eqjA.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -242.042877
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/1eqjA-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1eqjA/T0136-1-290-1eqjA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/1e/1eqjA/info/1eqjA.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.998367
Database has 2 sequences with 801 residues.


@@@@ gzip -f 1eqjA/T0136-1-290-1eqjA-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/2dubE


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.440353
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.451843
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.561417
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 1 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.518402
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.425308
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.425301
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -110.502304
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/2dubE-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-1-290-vit-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m  -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -viterbi 1 -sw 2 -subtract_null 4 -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -110.440826
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/2dubE-T0136-1-290-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.122299
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.010780
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -adpstyle 1 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Replacing nostruct-align/2dubE.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.621292
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/2dubE-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-1-290-local-adpstyle1.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Replacing nostruct-align/2dubE.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.568817
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/2dubE-T0136-1-290-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.541290
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.x.seq -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.449310
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-local-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-stride-ebghtl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-stride-ebghtl (T0136-1-290.t2k-100-30-stride-ebghtl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -165.440353
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-global-adpstyle5.pw -alphabet protein,EBGHTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.2d -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 2dubE/T0136-1-290-2dubE-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.stride-ebghtl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.stride-ebghtl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -151.892059
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-local-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 2 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-100-30-dssp-ebghstl.mlib  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model T0136-1-290.t2k-100-30-dssp-ebghstl (T0136-1-290.t2k-100-30-dssp-ebghstl model number 1)
T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -163.561417
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 126, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-2track-global-adpstyle5.pw -alphabet protein,EBGHSTL -trackcoeff 1.0,0.3 -sw 0 -adpstyle 5 -trackmod /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m,/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.seq -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq,/projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.dssp -subtract_null 4  -select_align 8
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model 2dubE/T0136-1-290-2dubE-2track-global-adpstyle5.pw
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(3541):  Reading track 0 model from MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k.dssp-ebghstl.mod(1769):  Reading track 1 model from MODEL -- Model from 2nd structure file T0136-1-290.t2k.dssp-ebghstl.rdb
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -150.936600
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-2track-global-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 149, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.425308
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 176, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-1-290-vit-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq  -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -110.502304
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/2dubE-T0136-1-290-vit-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 193, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -121.122299
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 236, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/2dubE-T0136-1-290-local-adpstyle5.pw -i /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5-db.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq -adpstyle 5 -sw 2 -subtract_null 4 -select_align 8
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod(22):  Replacing nostruct-align/2dubE.t2k-w0.5-db model number 1 with MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-cc20-22981/tmp.a2m
Scoring model /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t2k-w0.5.mod (nostruct-align/2dubE.t2k-w0.5-db model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -115.621292
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/2dubE-T0136-1-290-local-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 254, <STDIN> line 25.


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 2dubE/T0136-1-290-2dubE-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/models.97/pdb/2d/2dubE/info/2dubE.stride-mixed.seq  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -246.541290
Database has 2 sequences with 551 residues.


@@@@ gzip -f 2dubE/T0136-1-290-2dubE-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in -e at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 217, <STDIN> line 25.
Use of uninitialized value in concatenation (.) or string at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 109, <STDIN> line 25.
Use of uninitialized value in concatenation (.) or string at /projects/compbio/experiments/casp5/scripts-human/t2k_lib_pairwise_alignments line 109, <STDIN> line 25.
/projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments /projects/compbio/experiments/casp5/t0136/t0136-1-290 \
file:/projects/compbio/experiments/casp5/t0136-1-290 T0136-1-290 T0136-1-290.t2k.dssp-ebghstl.mod T0136-1-290.t2k.stride-ebghtl.mod T0136-1-290.t2k-w0.5.mlib T0136-1-290.t2k-100-30-dssp-ebghstl.mlib T0136-1-290.t2k-100-30-stride-ebghtl.mlib < T0136-1-290-top_hits_non_t2k > T0136-1-290-top_hits_non_t2k_pwise_alignments.rdb
Name "main::PRED2" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 51.
Name "main::EBGHSTL_TRACKMOD" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 19.
Name "main::EBGHTL_TRACKMOD" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 19.
Name "main::lln" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 37.
Name "main::BASEURL" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 19.
Name "main::EBGHSTL_MLIB" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 19.
Name "main::PT" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 55.
Name "main::EBGHTL_MLIB" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 19.
Name "main::PCEM_PDB" used only once: possible typo at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 28.


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/scripts/get_one_seq 1dciC < /projects/compbio/data/pdb/all-protein > /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC/1dciC.fa


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciC/T0136-1-290-1dciC-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC/1dciC.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.299179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciC/T0136-1-290-1dciC-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciC/T0136-1-290-1dciC-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC/1dciC.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.167679
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciC/T0136-1-290-1dciC-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciC/T0136-1-290-1dciC-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC/1dciC.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.754166
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciC/T0136-1-290-1dciC-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciC/T0136-1-290-1dciC-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC/1dciC.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.299179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciC/T0136-1-290-1dciC-vit-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciC/T0136-1-290-1dciC-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC/1dciC.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.167679
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciC/T0136-1-290-1dciC-local-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciC/T0136-1-290-1dciC-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciC/1dciC.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.754166
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciC/T0136-1-290-1dciC-simpleSW-adpstyle5.pw.a2m


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/scripts/get_one_seq 1kk2A < /projects/compbio/data/pdb/all-protein > /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A/1kk2A.fa


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk2A/T0136-1-290-1kk2A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A/1kk2A.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.148010
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk2A/T0136-1-290-1kk2A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk2A/T0136-1-290-1kk2A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A/1kk2A.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.013977
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk2A/T0136-1-290-1kk2A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk2A/T0136-1-290-1kk2A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A/1kk2A.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.729996
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk2A/T0136-1-290-1kk2A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk2A/T0136-1-290-1kk2A-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A/1kk2A.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.148010
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk2A/T0136-1-290-1kk2A-vit-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk2A/T0136-1-290-1kk2A-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A/1kk2A.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.013977
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk2A/T0136-1-290-1kk2A-local-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk2A/T0136-1-290-1kk2A-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk2A/1kk2A.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.729996
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk2A/T0136-1-290-1kk2A-simpleSW-adpstyle5.pw.a2m


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/scripts/get_one_seq 1kjzA < /projects/compbio/data/pdb/all-protein > /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA/1kjzA.fa


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kjzA/T0136-1-290-1kjzA-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA/1kjzA.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.148010
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kjzA/T0136-1-290-1kjzA-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kjzA/T0136-1-290-1kjzA-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA/1kjzA.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.013977
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kjzA/T0136-1-290-1kjzA-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kjzA/T0136-1-290-1kjzA-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA/1kjzA.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.729996
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kjzA/T0136-1-290-1kjzA-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kjzA/T0136-1-290-1kjzA-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA/1kjzA.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.148010
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kjzA/T0136-1-290-1kjzA-vit-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kjzA/T0136-1-290-1kjzA-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA/1kjzA.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.013977
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kjzA/T0136-1-290-1kjzA-local-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kjzA/T0136-1-290-1kjzA-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kjzA/1kjzA.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.729996
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kjzA/T0136-1-290-1kjzA-simpleSW-adpstyle5.pw.a2m


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/scripts/get_one_seq 1kk3A < /projects/compbio/data/pdb/all-protein > /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A/1kk3A.fa


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk3A/T0136-1-290-1kk3A-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A/1kk3A.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.048958
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk3A/T0136-1-290-1kk3A-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk3A/T0136-1-290-1kk3A-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A/1kk3A.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.899483
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk3A/T0136-1-290-1kk3A-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk3A/T0136-1-290-1kk3A-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A/1kk3A.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.744476
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk3A/T0136-1-290-1kk3A-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk3A/T0136-1-290-1kk3A-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A/1kk3A.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -117.048958
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk3A/T0136-1-290-1kk3A-vit-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk3A/T0136-1-290-1kk3A-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A/1kk3A.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -123.899483
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk3A/T0136-1-290-1kk3A-local-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1kk3A/T0136-1-290-1kk3A-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1kk3A/1kk3A.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -245.744476
Database has 2 sequences with 700 residues.


@@@@ gzip -f 1kk3A/T0136-1-290-1kk3A-simpleSW-adpstyle5.pw.a2m


@@@@ mkdir /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/scripts/get_one_seq 1dciB < /projects/compbio/data/pdb/all-protein > /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB/1dciB.fa


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciB/T0136-1-290-1dciB-vit-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB/1dciB.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 1
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.299179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciB/T0136-1-290-1dciB-vit-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciB/T0136-1-290-1dciB-local-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB/1dciB.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.167679
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciB/T0136-1-290-1dciB-local-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciB/T0136-1-290-1dciB-simpleSW-adpstyle1.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB/1dciB.fa  -adpstyle 1 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.754166
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciB/T0136-1-290-1dciB-simpleSW-adpstyle1.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciB/T0136-1-290-1dciB-vit-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB/1dciB.fa -viterbi 1 -sw 2 -subtract_null 4  -select_align 8 -adpstyle 5
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -120.299179
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciB/T0136-1-290-1dciB-vit-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciB/T0136-1-290-1dciB-local-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod -modellibrary /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mlib -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB/1dciB.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Reading parameter file T0136-1-290.t2k-w0.5.mod
T0136-1-290.t2k-w0.5.mod(22):  Reading MODEL --  Model from alignment file /var/tmp/tmp-build-weighted-model-bark-3916/tmp.a2m
Scoring model T0136-1-290.t2k-w0.5.mod (T0136-1-290.t2k-w0.5 model number 1)
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -124.167679
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciB/T0136-1-290-1dciB-local-adpstyle5.pw.a2m


@@@@ /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore 1dciB/T0136-1-290-1dciB-simpleSW-adpstyle5.pw -i /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod  -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.a2m -db /projects/compbio/experiments/casp5/t0136/t0136-1-290/1dciB/1dciB.fa  -adpstyle 5 -sw 2 -subtract_null 4  -select_align 8
Reading parameter file /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
/projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod(22):  Reading MODEL --  Model from alignment file T0136-1-290.a2m
SAM: /projects/compbio/experiments/protein-predict/SAM_T02/bin_freeze/sam/hmmscore v3.3.1 (December 20, 2001) compiled 04/11/02_15:33:57
Scoring model /projects/compbio/experiments/casp5/t0136/t0136-1-290/T0136-1-290.mod
WARNING: Reverse null model and E-value calculations are
being made without model calibration.  Use -calibrate first
for better results.
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -248.754166
Database has 2 sequences with 565 residues.


@@@@ gzip -f 1dciB/T0136-1-290-1dciB-simpleSW-adpstyle5.pw.a2m
Use of uninitialized value in concatenation (.) or string at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 90, <STDIN> line 5.
Use of uninitialized value in concatenation (.) or string at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 90, <STDIN> line 5.
Use of uninitialized value in concatenation (.) or string at /projects/compbio/experiments/casp5/scripts-human/t2k_non_lib_pairwise_alignments line 90, <STDIN> line 5.
cat T0136-1-290-top_hits_t2k_pwise_alignments.rdb > tmp.top.pair-al
/projects/compbio/bin/headchg -del < T0136-1-290-top_hits_non_t2k_pwise_alignments.rdb >> tmp.top.pair-al
mv tmp.top.pair-al T0136-1-290-top_hits_pwise_alignments.rdb
/projects/compbio/experiments/casp5/scripts-human/gather_best_align_scores 50 /projects/compbio/experiments/casp5/t0136/t0136-1-290 T0136-1-290 T0136-1-290-top_hits_pwise_alignments.rdb T0136-1-290.best-scores.rdb > T0136-1-290-predicted_alignments.rdb
Error: No average E-value for 1 in average scores hash
make: *** [T0136-1-290-predicted_alignments.rdb] Error 29