PFRMAT SS TARGET T0133 AUTHOR 4069-6308-1312 METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 15 METHOD 7 15 METHOD 9 15 METHOD 13 7 (1 EBGHSTL ) METHOD The input amino acid frequencies were determined from METHOD alignment T0133.t2k-thin90.a2m.gz METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1) METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 13 METHOD MODEL 1 M C 0.997 N C 0.797 S C 0.448 I C 0.306 K H 0.271 N H 0.328 V C 0.346 P C 0.514 A H 0.395 R H 0.415 V H 0.422 L H 0.363 S C 0.240 R C 0.383 R C 0.792 P T 0.735 G T 0.763 H C 0.440 S C 0.453 L C 0.373 E H 0.443 A H 0.484 E H 0.586 R H 0.720 E H 0.793 Q H 0.745 F H 0.816 D H 0.845 K H 0.903 T H 0.921 Q H 0.952 A H 0.973 I H 0.970 S H 0.972 I H 0.961 S H 0.934 K H 0.785 A H 0.700 I H 0.475 N C 0.386 S C 0.279 Q H 0.258 E C 0.292 A C 0.427 P S 0.450 V C 0.541 K C 0.673 E H 0.339 K H 0.353 H H 0.446 A H 0.735 R H 0.763 R H 0.793 I H 0.805 I H 0.636 L H 0.323 G E 0.300 T C 0.475 H C 0.251 H H 0.265 E H 0.531 K H 0.597 G H 0.620 A H 0.799 F H 0.879 T H 0.911 F H 0.914 W H 0.903 S H 0.860 Y H 0.821 A H 0.710 I H 0.525 G H 0.406 L C 0.342 P C 0.466 L C 0.387 P T 0.370 S S 0.367 S C 0.351 S H 0.452 I H 0.804 L H 0.916 S H 0.967 W H 0.983 K H 0.989 F H 0.993 C H 0.995 H H 0.995 V H 0.996 L H 0.996 H H 0.995 K H 0.994 V H 0.988 L H 0.976 R H 0.904 D H 0.558 G T 0.637 H C 0.710 P T 0.513 N T 0.577 V H 0.344 L H 0.439 H H 0.654 D H 0.620 C H 0.598 Q H 0.587 R H 0.630 Y H 0.659 R H 0.803 S H 0.803 N H 0.814 I H 0.865 R H 0.835 E H 0.776 I H 0.819 G H 0.761 D H 0.672 L H 0.587 W H 0.352 G T 0.378 H T 0.321 L C 0.325 R T 0.295 D T 0.270 Q C 0.309 Y H 0.298 G H 0.546 H H 0.804 L H 0.927 V H 0.984 N H 0.994 I H 0.995 Y H 0.996 T H 0.996 K H 0.993 L H 0.987 L H 0.985 L H 0.978 T H 0.958 K H 0.945 I H 0.917 S H 0.825 F H 0.728 H H 0.543 L T 0.329 K H 0.280 H C 0.434 P T 0.419 Q T 0.357 F C 0.450 P C 0.366 A T 0.419 G C 0.354 L C 0.380 E C 0.424 V C 0.431 T C 0.541 D H 0.718 E H 0.780 V H 0.793 L H 0.746 E H 0.659 K H 0.584 A H 0.503 A H 0.282 G T 0.356 T T 0.309 D C 0.693 V T 0.594 N T 0.691 N C 0.278 I C 0.327 F E 0.369 Q E 0.538 L E 0.453 T E 0.454 V H 0.401 E H 0.395 M H 0.703 F H 0.774 D H 0.729 Y H 0.813 M H 0.855 D H 0.748 C H 0.748 E H 0.878 L H 0.940 K H 0.938 L H 0.962 S H 0.980 E H 0.983 S H 0.984 V H 0.982 F H 0.970 R H 0.933 Q H 0.884 L H 0.727 N H 0.324 T C 0.240 A C 0.302 I C 0.384 A C 0.324 V C 0.330 S C 0.341 Q C 0.285 M C 0.495 S C 0.533 S T 0.760 G T 0.685 Q C 0.414 C E 0.537 R E 0.430 L H 0.338 A H 0.678 P H 0.829 L H 0.950 I H 0.971 Q H 0.979 V H 0.985 I H 0.983 Q H 0.955 D H 0.867 C H 0.764 S H 0.657 H H 0.651 L H 0.884 Y H 0.964 H H 0.989 Y H 0.993 T H 0.995 V H 0.995 K H 0.993 L H 0.987 M H 0.980 F H 0.960 K H 0.887 L H 0.782 H H 0.526 S T 0.467 C T 0.563 L C 0.444 P C 0.873 A H 0.538 D H 0.545 T H 0.651 L H 0.897 Q H 0.917 G H 0.925 H H 0.942 R H 0.979 D H 0.981 R H 0.975 F H 0.979 H H 0.977 E H 0.970 Q H 0.969 F H 0.966 H H 0.934 S H 0.916 L H 0.951 R H 0.966 N H 0.942 F H 0.935 F H 0.908 R H 0.721 R H 0.526 A H 0.468 S T 0.439 D T 0.432 M H 0.769 L H 0.775 Y H 0.757 F H 0.601 K H 0.382 R H 0.315 L C 0.273 I E 0.377 Q C 0.509 I C 0.518 P C 0.677 R C 0.588 L C 0.680 P C 0.710 E C 0.440 G C 0.482 P C 0.743 P C 0.391 N C 0.460 F C 0.358 L C 0.357 R C 0.493 A H 0.433 S H 0.377 A H 0.350 L H 0.460 A H 0.427 E H 0.376 H H 0.448 I C 0.345 K C 0.470 P C 0.543 V C 0.744 V C 0.711 V C 0.643 I C 0.610 P C 0.724 E C 0.583 E C 0.620 A C 0.583 P C 0.573 E C 0.850 E C 0.998 END