PFRMAT SS
TARGET T0129
AUTHOR SAM-T02-WEBSERVER 
METHOD TARGET T0129
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0129.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 6
METHOD
MODEL 1
M C 0.98
L C 0.74
I C 0.50
S C 0.45
H H 0.44
S H 0.83
D H 0.87
L H 0.91
N H 0.95
Q H 0.95
Q H 0.93
L H 0.88
K H 0.76
S H 0.64
A H 0.47
G T 0.36
I S 0.35
G C 0.38
F C 0.80
N C 0.90
A H 0.92
T H 0.88
E H 0.89
L H 0.94
H H 0.88
G H 0.86
F H 0.88
L H 0.83
S H 0.68
G H 0.51
L H 0.47
L H 0.31
C T 0.25
G C 0.31
G T 0.33
L C 0.33
K C 0.50
D C 0.25
Q H 0.49
S H 0.66
W H 0.96
L H 0.98
P H 0.98
L H 0.99
L H 0.99
Y H 0.97
Q H 0.94
F H 0.81
S H 0.48
N C 0.38
D T 0.49
N T 0.54
H C 0.59
A C 0.51
Y C 0.55
P H 0.51
T H 0.70
G H 0.63
L H 0.69
V H 0.79
Q H 0.82
P H 0.89
V H 0.96
T H 0.97
E H 0.98
L H 0.98
Y H 0.99
E H 0.98
Q H 0.97
I H 0.96
S H 0.93
Q H 0.87
T H 0.77
L H 0.49
S H 0.33
D T 0.39
V C 0.37
E S 0.40
G E 0.39
F E 0.76
T E 0.96
F E 0.98
E E 0.98
L E 0.96
G E 0.88
L E 0.46
T C 0.73
E T 0.77
D T 0.66
E C 0.53
N C 0.63
V H 0.29
F H 0.45
T H 0.49
Q H 0.62
A H 0.77
D H 0.83
S H 0.87
L H 0.96
S H 0.98
D H 0.98
W H 0.98
A H 0.98
N H 0.96
Q H 0.93
F H 0.93
L H 0.87
L H 0.72
G H 0.53
I H 0.39
G T 0.41
L C 0.27
A C 0.41
Q H 0.48
P H 0.58
E H 0.57
L H 0.64
A H 0.69
K H 0.69
E H 0.74
K H 0.70
G H 0.72
E H 0.91
I H 0.96
G H 0.97
E H 0.97
A H 0.97
V H 0.96
D H 0.95
D H 0.94
L H 0.99
Q H 0.99
D H 0.99
I H 0.99
C H 0.97
Q H 0.75
L T 0.56
G T 0.40
Y C 0.61
D C 0.77
E H 0.40
D H 0.38
D H 0.41
N C 0.42
E H 0.93
E H 0.91
E H 0.91
L H 0.93
A H 0.92
E H 0.92
A H 0.90
L H 0.95
E H 0.97
E H 0.99
I H 0.99
I H 1.00
E H 1.00
Y H 1.00
V H 1.00
R H 1.00
T H 1.00
I H 1.00
A H 0.99
M H 0.98
L H 0.96
F H 0.92
Y H 0.77
S H 0.60
H H 0.48
F H 0.26
N C 0.44
E S 0.47
G C 0.67
E C 0.77
I C 0.87
E C 0.80
S C 0.51
K C 0.48
P C 0.72
V C 0.66
L C 0.83
H C 1.00