Best Alignments for T0129

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here. If there are several alignments to templates that share a SCOP superfamily or FSSP representative, SAM_T02 only reports the best one.

Warning: E-values of the top models may be overly optimistic.

A2M alignment AL alignment E-value FSSP rep SCOP Domain(s)
T0129-1brwA-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0129-1brwA-2track-protein-STR-local-adpstyle5.pw.al 6.1154e+00 1brwA a.46.2.1
T0129-1cll-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0129-1cll-2track-protein-STR-local-adpstyle5.pw.al 8.2267e+00 1cll a.39.1.5
T0129-1go3F-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0129-1go3F-2track-protein-STR-local-adpstyle5.pw.al 1.1345e+01 a.60.8.2
T0129-1a59-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0129-1a59-2track-protein-STR-local-adpstyle5.pw.al 9.5153e+00 1aj8A a.103.1.1
T0129-1a8h-2track-protein-STR-local-adpstyle5.pw.a2m.gz T0129-1a8h-2track-protein-STR-local-adpstyle5.pw.al 8.9599e+00 1a8h c.26.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001