# This contains a list of "best hit" sequence (using w0.5) for casp5 targets # as of 10 August 2002. # Ones that are already in t2k have been commented out. # The purpose of this list is to update the template libray to have the # best hits, so that more alignments are tried to the best hits, and # so that bi-directional score combining is tried on the best hits, # possibly changing their ranking in the final combined list. # Targets to redo based on this update are # t0129, t0136, t0137,t0138, t0147, t0156, t0159, t0160, t0161, # t0175, t0176. # Note: t0138 has already been submitted, so a substantial improvement # would be needed to trigger resubmission (before the 14 Aug deadline). 1ekbB 235 1.63e-01 5ptp b.47.1.2 26282 t0129 # 1fa0B 537 5.68e-04 1fa0B d.58.16.1 39336 t0130 # 1afrA 345 1.46e-02 1afrA a.25.1.2 16805 t0131 # 1dqeA 137 1.53e+00 1dqeA a.39.2.1 17388 t0132 # 1hg5A 289 4.85e-17 1hg5A a.118.10.1 19221 t0133 # 1d0cA 444 1.71e+00 d.174.1.1 64769 t0134 # 1j7nA 776 7.05e-01 d.92.1.14 66409 t0135 1b57A 358 2.26e-02 1dosA c.1.10.2 29177 t0136 1bwyA 132 2.40e-34 1hmt b.60.1.2 27172 t0137 1d5wC 126 1.41e+00 1dbwA c.23.1.1 31101 t0138 1qfwM 108 1.54e+00 32c2A b.1.1.1 20436 t0138 (2nd) # 1gdoB 240 2.35e-01 1gdoA d.153.1.1 41805 t0139 # 1e3pA 757 4.26e-11 1e3hA a.4.9.1 16258 t0140 # 1lba 146 1.50e-23 1lba d.118.1.1 41062 t0141 # 1i9zA 347 4.57e-53 1i9yA d.151.1.2 62102 t0142 # 1ky9B 448 5.91e-20 t0143 # 2cpl 165 2.44e-29 2cpl b.62.1.1 27420 t0144 # 1fgqA 839 6.90e-01 1yge a.119.1.1 59826 t0145 (1yge almost as close) # 1j9yA 385 1.16e+00 1j9yA c.1.8.3 62791 t0146 1f07A 321 6.64e-01 1ezwA c.1.16.3 59560 t0147 # 1efm 393 4.89e-03 1efcA c.37.1.8 64732 t0148 # 1j8mF 297 6.70e-11 1ng1 a.24.13.1 62742 t0149 # 1ck9A 104 5.88e-20 1ck9A d.79.3.1 39806 t0150 # 1qvcA 145 4.37e-27 3ullA b.40.4.3 25284 t0151 # 1i1dA 161 1.33e-03 1i21A d.108.1.1 61526 t0152 # 1dupA 152 2.27e-32 1dupA b.85.4.1 28351 t0153 # 1ihoA 283 7.01e-57 1ihoA c.26.1.4 62390 t0154 # 1dhn 121 1.38e-25 1dhn d.96.1.3 40663 t0155 1kpjI 134 9.46e-01 i.1.1.2 68758 t0156 (obsolete, use 1lnrI) # 1ezwA 349 1.65e+00 1ezwA c.1.16.3 29558 t0157 # 1jjiA 311 2.34e-50 c.69.1.2 66766 t0158 1iiwA 232 3.14e-01 c.94.1.1 62461 t0159 1grwA 126 4.14e-23 t0160 1a16 440 1.37e+00 1az9 c.55.2.1 33548 t0161 # 2gbp 309 3.81e-01 1gca c.93.1.1 35657 t0162 # 1l9fA 389 5.18e-41 t0163 # 2bnh 457 4.36e-25 1a4yA c.10.1.1 30850 t0164 # 1a88A 275 2.73e-19 1brt c.69.1.12 34707 t0165 # 1jgsA 138 7.41e-14 a.4.5.28 66683 t0166 # 1jeoA 180 4.07e-22 c.80.1.3 66611 t0167 # 1bza 262 4.98e-01 1btl e.3.1.1 42701 t0168 # 1i21A 159 7.04e-14 1i21A d.108.1.1 61549 t0169 # 1igd 61 1.73e-01 2igd d.15.7.1 37822 t0170 # 1cr6B 554 3.07e-30 1cr6B c.108.1.2 43338 t0171 # 1dusA 194 1.33e-13 1dusA c.66.1.4 34182 t0172 # 6mhtA 327 1.96e-02 6mhtA c.66.1.10 34226 t0173 # 1kkoA 413 6.57e-01 c.1.11.2 68675 t0174 1l1eA 287 4.28e-24 t0175 1jrmA 104 4.17e-15 d.206.1.1 67136 t0176