;  SAM: prettyalign v3.2 (July 31, 2000) compiled 07/31/00_16:52:38
;  (c) 1992-1999 Regents of the University of California, Santa Cruz
;
;          Sequence Alignment and Modeling Software System
;         http://www.cse.ucsc.edu/research/compbio/sam.html
;
; ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
; R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
;  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
; K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
;  remote protein homologies, Bioinformatics 14(10):846-856, 1999.
; A. Krogh et al., Hidden Markov models in computational biology:
;  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
; ---------------------------------------------------------------------
                                                                      
                                                                      
T0098 ........................................................DNKPKNLD
1nseA srapapatphapdhspapnsptltrppegpkfprvknwelgsitydtlcaqsqqdgPCTPRRCL


      10                                       20        30           
       |                                        |         |           
T0098 ASIT...............................SIIHEIGVPAHIKGYLYLREAIA......
1nseA GSLVlprklqtrpspgpppaeqllsqardfinqyySSIKRSGSQAHEERLQEVEAEVAstgtyh


                     40        50        60        70        80       
                      |         |         |         |         |       
T0098 ............MVYHDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNLESIS
1nseA lreselvfgakqAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYATNRGNLRSAI


       90                                                             
        |                                                             
T0098 SLFG............................................................
1nseA TVFPqrapgrgdfriwnsqlvryagyrqqdgsvrgdpanveitelciqhgwtpgngrfdvlpll


                                                                      
                                                                      
T0098 ................................................................
1nseA lqapdeapelfvlppelvlevplehptlewfaalglrwyalpavsnmlleigglefsaapfsgw


                                                                      
                                                                      
T0098 ................................................................
1nseA ymsteigtrnlcdphryniledvavcmdldtrttsslwkdkaaveinlavlhsfqlakvtivdh


            100                                     110       120 
              |                                       |         | 
T0098 YTVSVSKAKPTNSEFIA..............................MVADKLRLEHKAS
1nseA HAATVSFMKHLDNEQKArggcpadwawivppisgsltpvfhqemvnyILSPAFRYQPDPW