;  SAM: prettyalign v3.2 (June, 2000) compiled 07/10/00_09:40:44
;  (c) 1992-1999 Regents of the University of California, Santa Cruz
;
;          Sequence Alignment and Modeling Software System
;         http://www.cse.ucsc.edu/research/compbio/sam.html
;
; ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
; R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
;  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
; K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
;  remote protein homologies, Bioinformatics 14(10):846-856, 1999.
; A. Krogh et al., Hidden Markov models in computational biology:
;  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
; ---------------------------------------------------------------------
                                     10        20        30            
                                     |         |         |            
shpaltqlralryck.............EIPALDPQLLDWLLLEDSMTKRFEQQGKTVSvtmiREGFVEQ
mvdlkrlrqepevfhrairekgvaldleALLALDREVQELKKRLQEVQTERNQVAKRVP....KAPPEEK


 40        50        60        70               80        90           
 |         |         |         |                |         |           
NEIPEELPLLPKESRYWLREILLCADGEPWLAGRTV......VPVStLSGPELALQKLGKTPLGrylfts
EALIARGKALGEEAKRLEEALREKEARLEALLLQVPlppwpgAPVG.GEEANREIKRVGGPPEF......


   100       110        120       130                                  
    |         |          |         |                                  
STLTRDFIEIGRDAGLWGR.RSRLRLSGKPLLLTELFLpasply..........................
SFPPLDHVALMEKNGWWEPrISQVSGSRSYALKGDLALyelallrfamdfmarrgflpmtlpsyarekaf


                                                                       
                                                                      
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lgtghfpayrdqvwaiaetdlyltgtaevvlnalhsgeilpyealplryagyapafrseagsfgkdvrgl


                                                                       
                                                                      
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mrvhqfhkveqyvlteasleasdrafqellenaeeilrllelpyrlvevatgdmgpgkwrqvdievylps


                                                                       
                                                                      
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egryrethscsalldwqarranlryrdpegrvryaytlnntalatprilamllenhqlqdgrvrvpqali


              
             
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pymgkevlepcg.