;  SAM: prettyalign v3.2 (July 31, 2000) compiled 08/11/00_16:27:51
;  (c) 1992-2000 Regents of the University of California, Santa Cruz
;
;          Sequence Alignment and Modeling Software System
;         http://www.cse.ucsc.edu/research/compbio/sam.html
;
; ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
; R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
;  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
; K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
;  remote protein homologies, Bioinformatics 14(10):846-856, 1999.
; A. Krogh et al., Hidden Markov models in computational biology:
;  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
; ---------------------------------------------------------------------
                              10        20        30        40        
                               |         |         |         |        
T0124 ................NMKEVTQLPEPQTASLAELQQMKLFLKLLKKQEKELKELERKGSKRRE
1qbkB meyewkpdeqglqqil-------------------------------------QLLKESQSPDT


      50        60                                                    
       |         |                                                    
T0124 ELLQKYSVLFLE....................................................
1qbkB TIQRTVQQKLEQlnqypdfnnylifvltklksedeptrslsglilknnvkahfqnfpngvtdfi


                                                                      
                                                                      
T0124 ................................................................
1qbkB kseclnnigdsspliratvgilittiaskgelqnwpdllpklcslldsedyntcegafgalqki


                                                                      
                                                                      
T0124 ................................................................
1qbkB cedsaeildsdvldrplnixipkflqffkhsspkirshavacvnqfiisrtqalxlhidsften


                                                                      
                                                                      
T0124 ................................................................
1qbkB lfalagdeepevrknvcralvxllevrmdrllphxhniveyxlqrtqdqdenvaleacefwltl


                                                                      
                                                                      
T0124 ................................................................
1qbkB aeqpickdvlvrhlpklipvlvngxkysdidiillkgdveedetipdseqdirprfhrsrtvaq


                                                                      
                                                                      
T0124 ................................................................
1qbkB qhdedgieeedddddeiddddtisdwnlrkcsaaaldvlanvyrdellphilpllkellfhhew


                                                                      
                                                                      
T0124 ................................................................
1qbkB vvkesgilvlgaiaegcxqgxipylpeliphliqclsdkkalvrsitcwtlsryahwvvsqppd


                                                                      
                                                                      
T0124 ................................................................
1qbkB tylkplxtellkrildsnkrvqeaacsafatleeeactelvpylayildtlvfafskyqhknll


                          70        80        90       100       110  
                           |         |         |         |         |  
T0124 ............PVYPRGLDSQVVELKERLEMELIHLGEEYHDGIRRRKEQHATEQTAKITELA
1qbkB ilydaigtladsVGHHLNKPEYIQXLXPPLIQKWNXLKDED---------KDLFPLLECLSSVA


           120       130       140       150             160       170
             |         |         |         |               |         |
T0124 REKQIAELKALKESSESNIKDIKKKLEAKRLDRIQVMMRSTSDKA......AQERLKKEINNSH
1qbkB TALQSGFLPYCEPVYQRCVNLVQKTLAQAXLNNAQPDQYEAPDKDfxivalDLLSGLAEGLGGN


             180       190       200       210       220       230    
               |         |         |         |         |         |    
T0124 IQEVVQTIKLLTEKTARYQQKLEEKQAENLRAIQEKEGQLQQEAVAEYEEKLKTLTVEVQEMVK
1qbkB IEQLVARSNILTLXYQCXQDKXPEVRQSSFALLGDLTKACFQHVKPCIADFXPILGTNLNPEFI


         240                                                          
           |                                                          
T0124 NYMKEVFP........................................................
1qbkB SVCNNATWaigeisiqxgiexqpyipxvlhqlveiinrpntpktllentaitigrlgyvcpqev


                                                                      
                                                                      
T0124 ................................................................
1qbkB apxlqqfirpwctslrnirdneekdsafrgictxisvnpsgviqdfiffcdavaswinpkddlr


                                               
                                               
T0124 .........................................
1qbkB dxfckilhgfknqvgdenwrrfsdqfplplkerlaafygv.