From farmer@cse.ucsc.edu Wed Aug 30 07:34:39 2000 Return-Path: Received: from beta.cse.ucsc.edu (beta.cse.ucsc.edu [128.114.48.15]) by cyborg.bioinfo.pl (8.9.3/8.8.7) with SMTP id HAA10832 for Message-Id: <200008300541.WAA12070@beta.cse.ucsc.edu> Subject: T0128(target 99 alignment) MIME-Version: 1.0 Content-type: multipart/mixed; Boundary="simple mime boundary" Apparently-To: T0128.target99@cafasp.bioinfo.pl --simple mime boundary Content-type: text/plain; charset=us-ascii The following is the Target99 alignment in the formats you requested. Citation: K. Karplus, C. Barrett, and R. Hughey, Hidden Markov Models for Detecting Remote Protein Homologies, Bioinformatics, 1998, vol. 14, no. 10, pp. 846-856. http://www.cse.ucsc.edu/resesarch/compbio/HMM-apps -------------------------------------------------------- For questions or problems, please see the SAM-T99 FAQ at http://www.cse.ucsc.edu/research/compbio/HMM-apps/sam-t99-faq.html or email us at sam-info@cse.ucsc.edu --simple mime boundary Content-type: text/plain; charset=us-ascii; name='t99-results-967614066.t99align.a2m' Content-Disposition: attachment; filename="t99-results-967614066.t99align.a2m" >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEK LEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPPGKGGGKPGGKIADLINKFFG SFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHNLMHAADAQVLLALDVWEH AYYLQYKNDRGSYVDNWWNVVNWDDVERRLQKALNGQIALKL >gi|134649|sp|P28760|SODM_BACCA_1:203 SUPEROXIDE DISMUTASE [MN]gi|98098|pir||S22053 superoxide dismutase (EC 1.15.1.1) (Mn) - Bacillus caldotenaxgi|39453|emb|CAA44556.1| (X62682) Manganese superoxide dismutase [Bacillus caldotenax]gi|7578509|gb|AAF64074.1|AF147780_1 (AF147780) superoxide dismutase [Bacillus thermoleovorans]gi|384175|prf||1905285A superoxide dismutase [Bacillus caldotenax] ---------------MPFELPALPYPYDALEPHIDKETMNIHHTKHHNTY VTNLNAALEGHPDLQNKSLEELLSnlealpeSIRTAVRNNGGGHANHSLF WTILSPN--GGGEPTGELAEAINKKFGSFTAFKDEFSKAAAGRFGSGWAW LVVN--NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEY IAAFWNIVNWDEVAKRYSEAKA-------k >gi|134650|sp|P00449|SODM_BACST_1:203 SUPEROXIDE DISMUTASE [MN]gi|1070456|pir||DSBSNF superoxide dismutase (EC 1.15.1.1) (Mn) - Bacillus stearothermophilusgi|143203|gb|AAA22600.1| (M26646) manganese superoxide dismutase (EC 1.15.1.1) [Bacillus stearothermophilus]gi|143552|gb|AAA22765.1| (M81188) Mn-superoxide dismutase [Bacillus stearothermophilus]gi|143555|gb|AAA22767.1| (M81914) Mn-superoxide dismutase [Bacillus stearothermophilus] ---------------MPFELPALPYPYDALEPHIDKETMNIHHTKHHNTY VTNLNAALEGHPDLQNKSLEELLSnlealpeSIRTAVRNNGGGHANHSLF WTILSPN--GGGEPTGELADAINKKFGSFTAFKDEFSKAAAGRFGSGWAW LVVN--NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEY IAAFWNVVNWDEVAKRYSEAKA-------k >gi|3320377|gb|AAC26483.1|_1:201 (AF013768) manganese superoxide dismutase [Vibrio alginolyticus] ---------------MTYTLPDLPYAYDALEPYIDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKTVEELLAdfssvpeDIQTAVRNNGGGHANHTFF WEILGPN--AGGEPTGAIKEAIEETFGSFEDFKEEFKTAATGRFGSGWAW LVVK--DGKLAITSTANQDSPLMDGQTPVLGLDVWEHAYYLKYKNVRPDY INAFWSVVNWDKVNEYFAKA--------- >gi|7305511|ref|NP_038699.1|_23:222 superoxide dismutase 2, mitochondrialgi|53450|emb|CAA28645.1| (X04972) manganese superoxide dismutase [Mus musculus] mlcraacstgrrlgpvavaags--------------RHKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNATEEKYHEALAKGDVTTQVALQP ALKFNGGGHINHTIFWTNLSPK--GGGEPKGELLEAIKRDFGSFEKFKEK LTAMSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVTERYTACKK------- >gi|832851|gb|AAB60902.1|_23:222 (L35528) manganese superoxide dismutase [Mus musculus] mlcraacstgrrlgpvagaags--------------RHKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNATEEKYHEALAKGDVTTQVALQP ALKFNGGGHINHTIFWTNLSPK--GGGEPKGELLEAIKRDFGSFEKFKEK LTAMSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVTERYTACKK------- >gi|3041732|sp|P09671|SODM_MOUSE_23:222 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|2117683|pir||I57023 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - mousegi|288505|emb|CAA79308.1| (Z18857) manganese superoxide dismutase [Mus musculus]gi|1037120|gb|AAB34899.1| (S78846) manganese superoxide dismutase, MnSOD [mice, C3H/HeJ, Peptide, 222 aa] [Mus sp.] mlcraacstgrrlgpvagaags--------------RHKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNATEEKYHEALAKGDVTTQVALQP ALKFNGGGHINHTIFWTNLSPK--GGGEPKGELLEAIKRDFGSFEKFKEK LTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVTERYTACKK------- >gi|8394331|ref|NP_058747.1|_23:222 superoxide dimutase 2, mitochondrialgi|134678|sp|P07895|SODM_RAT SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|279455|pir||DSRTN superoxide dismutase (EC 1.15.1.1) (Mn) precursor - ratgi|57273|emb|CAA39937.1| (X56600) manganese containing superoxide dismutase [Rattus norvegicus] mlcraacsagrrlgpaastags--------------RHKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHATYVNNLNVTEEKYHEALAKGDVTTQVALQP ALKFNGGGHINHSIFWTNLSPK--GGGEPKGELLEAIKRDFGSFEKFKEK LTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVSQRYIVCKK------- >gi|56691|emb|CAA68549.1|_23:222 (Y00497) precursor (AA -24 to 198) [Rattus norvegicus] mlcraacsagrrlgpaastags--------------RHKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHATYVNNLNVTEEKYHEALAKGDVTTQVALQP ALKFNGGGHINHSIFWTNLSPK--GGGEPKGELLEAIKRDFGSFEKFKEK LTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNHDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVSQRYIVCKK------- >gi|134665|sp|P04179|SODM_HUMAN_23:222 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|1070454|pir||DSHUN superoxide dismutase (EC 1.15.1.1) (Mn) precursor - human mlsravcgtsrqlapalgylgs--------------RQKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQP ALKFNGGGHINHSIFWTNLSPN--GGGEPKGELLEAIKRDFGSFDKFKEK LTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACKK------- >gi|448837|prf||1918164A_1:204 superoxide dismutase [Bacillus stearothermophilus] ---------------MPFELPALPYPYDALEPHIDKETMNIHHTKHHNTY VTNLNAALEGHPDLQNKSLEELLSnlealpeSIRTAVRNNGGGHANHSLF WTILSPN--GGGEPTGELADAINKKFGSFTAFKDEFSKAAAGRFGSGWAW LVVN--NGELEITSTPNQDSPPIMeGKTPILGLDVWEHAYYLKYQNRRPE YIAAFWNVVNWDEVAKRYSEAKA-------k >gi|1711457|sp|P53654|SODM_XANCP_1:203 SUPEROXIDE DISMUTASE [MN]gi|1150790|gb|AAB47971.1| (U42464) superoxide dismutase [Xanthomonas campestris] ---------------MAYTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTY INNVNAALEGTEYADLPIEELVSKlkslpeNLQGPVRNNGGGHANHSLFW TVLSPN--GGGEPKGEVAKAIDKDIGGFEKFKEAFTKAAVSRFGSGWAWL SVTP-DKKLVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPEYI GAFYNAVNWEEVERRYHAAIA------- >gi|34711|emb|CAA68533.1|_23:222 (Y00472) MnSOD precursor [Homo sapiens] mlsravcgtsrqlapalgylgs--------------RQKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQP ALKFNGGGHINHSIFWTNLSPN--GGGEPKGELLEAIKRDFGSFDKFKEK LTAASVGVQGSGWGWLGFNKQRGHLQIAACPNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACKK------- >gi|34709|emb|CAA42066.1|_23:222 (X59445) manganese superoxide dismutase (MnSOD) [Homo sapiens]gi|34795|emb|CAA33228.1| (X15132) precursor [Homo sapiens] mlsravcgtsrqlapalgylgs--------------RQKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNVNEEKYQEALAKGDVTAQIALQP ALKFNGGGHINHSIFWTNLSPN--GGGEPKGELLEAIKRDFGSFDKFKEK LTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACKK------- >gi|442613|pdb|1ABM|A_1:198 Chain A, Manganese Superoxide Dismutase (E.C.1.15.1.1)gi|442614|pdb|1ABM|B Chain B, Manganese Superoxide Dismutase (E.C.1.15.1.1)gi|443133|pdb|1MSD|A Chain A, Manganese Superoxide Dismutase (E.C.1.15.1.1)gi|443134|pdb|1MSD|B Chain B, Manganese Superoxide Dismutase (E.C.1.15.1.1) ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAY VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >gi|34707|emb|CAA32502.1|_23:222 (X14322) Manganese superoxide dismutase [Homo sapiens]gi|36537|emb|CAA68791.1| (Y00985) precursor of manganese-containing superoxide dismutase (MnSOD) (AA -24 to 198) [Homo sapiens]gi|338286|gb|AAA36622.1| (M36693) superoxide dismutase [Homo sapiens] mlsravcgtsrqlapalgylgs--------------RQKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQTALQP ALKFNGGGHINHSIFWTNLSPN--GGGEPKGELLEAIKRDFGSFDKFKEK LTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACKK------- >gi|134638|sp|P19685|SODF_COXBU_1:192 SUPEROXIDE DISMUTASE [FE]gi|282120|pir||A44791 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Coxiella burnetiigi|40406|emb|CAA38444.1| (X54627) superoxide dismutase [Coxiella burnetii]gi|145002|gb|AAA23311.1| (M74242) superoxide dismutase [Coxiella burnetii] ---------------MAFELPDLPYKLNALEPHISQETLEYHHGKHHRAY VNKLNKLIEGTPFEKEPLEEI-IRKSDGGIFNNAAQHWNHTFYWHCMSPD --GGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLVKDN-N GKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFWQV VNWDFVMKNFK-----------s >gi|36518|emb|CAA30687.1|_10:222 (X07834) superoxide dismutase precursor (AA -24 to 198) [Homo sapiens] mlsravcgt-SRQLPPVLGYLGSRQKHSLPDLPYDYGALEPHINAQIMQL HHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHS IFWTNLSPN--GGGEPKGELLEAIKLDFGSFDKFKEKLTAASVGVQGSGW GWLGFNKERGHLQIAACPNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVR PDYLKAIWNVINWENVTERYMACKK------- >gi|1633498|pdb|1VAR|A_2:198 Chain A, Mitochondrial Manganese Superoxide Dismutase Variant With Ile 58 Replaced By Thrgi|1633499|pdb|1VAR|B Chain B, Mitochondrial Manganese Superoxide Dismutase Variant With Ile 58 Replaced By Thr x-----------------HSLPDLPYDYGALEPHINAQIMQLHHSKHHAA YVNNLNVTEEKYQEALAKGDVTAQTALQPALKFNGGGHINHSIFWTNLSP N--GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKE RGHLQIAACPNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW NVINWENVTERYMACKK------- >gi|4589878|dbj|BAA76922.1|_23:222 (AB001693) manganese superoxide dismutase [Equus caballus] mlcraacstsrklvpalgslgs--------------RQKHSLPDLQYDYG ALEPYINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQP ALKFNGGGHINHTIFWTNLSPN--GGGEPKGKLLDAIKRDFGSFDKFKEK LTAVSAGVQGSGWGWLGFNKDQGRLQIVACPNQDPLQGTtGLIPLLGIDV WEHAYYLQYKNVRPDYLKAIWNVINWENVSERYMACKK------- >gi|7546411|pdb|1EM1|A_1:198 Chain A, X-Ray Crystal Structure For Human Manganese Superoxide Dismutase, Q143agi|7546412|pdb|1EM1|B Chain B, X-Ray Crystal Structure For Human Manganese Superoxide Dismutase, Q143a ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAY VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNADPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >gi|5758312|gb|AAD50778.1|AF162664_1_5:201 (AF162664) manganese co-factored superoxide dismutase [Streptococcus pneumoniae] maii-------------------LPELPYAYDALEPYIDAETMHLHHDKH HQTYVNNANAALEKHPEIGEDLEALLADvdlsqhDIRQALINNGGGHLNH ALFWELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSG WAWLVVNK-EGKLEVTSTANQDTPISEGKKPILGLDVWEHAYYVKYRNVR PDYIKAFFSVINWNKVDELYAAAK-------- >gi|7798571|dbj|BAA95631.1|_1:203 (AB042546) superoxide dismutase [Bacillus thermoleovorans] ---------------MPFELPALPYPYDALEPHIDKETMNIHHTKHHNTY VTNLNAALEGHPDLQNKSLEELLSnlealpeSIRTAVRNNGGGHANHSLF WTILSPN--GGGEPTGELAEAINKKFGSFTAFKDEFSKAAAGRFSPGWAW LVVN--NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEY IAAFWNIVNWDEVAKRYSEAKA-------k >gi|3355882|dbj|BAA31974.1|_1:202 (D86856) superoxide dismutase [Bacillus subtilis] ---------------MAYELPELPYAYDALEPHIDKETMTIHHTKHHNTY VTNLNKAVEGNTALANKSVEELVAdldsvpeNIRTAVRNNGGGHANHKLF WTLLSPN--GGGEPTGALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAW LVVN--NGKLEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPDY ISAFWNVVNWDEVARLYSEAK-------- >gi|2914416|pdb|1AP6|A_1:198 Chain A, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutasegi|2914417|pdb|1AP6|B Chain B, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutasegi|2914414|pdb|1AP5|A Chain A, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutasegi|2914415|pdb|1AP5|B Chain B, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutase ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAF VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >gi|3790114|emb|CAA05291.1|_1:202 (AJ002279) manganese superoxide dismutase [Bacillus licheniformis] ---------------MAYKLPELPYAYDALEPHIDKETMNIHHTKHHNTY VTKLNEAVAGKQDLESKSVEELVAnldavpeNIRTAVRNNGGGHANHSLF WKLLSPN--GGGAPTGELAEAINSKFGSFDQFKEDFAAAAAARFGSGWAW LVVN--NGELEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPDY IKAFWNVVNWDEVAPLYSEAK-------- >gi|498260|gb|AAA30655.1|_19:231 (L22092) manganous superoxide dismutase [Bos taurus] prgpraastmlsraacst-SRRLVPALSVLGSRQKHSLPDLPYDYGALEP HINAQIMQLHHSKHHAAYVNNLNVAEEKYREALEKGDVTAQIALQPALKF NGGGHINHSIFWTNLSPN--GGGEPQGELLEAIKRDFGSFAKFKEKLTAV SVGVQGSGWGWLGFNKEQGRLQIAACSNQDPLQGTtGLIPLLGIDVWEHA YYLQYKNVRPDYLKAIWNVINWENVTARYTACSK------- >gi|1174380|sp|P41976|SODM_BOVIN_10:222 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|7433321|pir||I51918 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - bovine mlsraacst-SRRLVPALSVLGSRQKHSLPDLPYDYGALEPHINAQIMQL HHSKHHAAYVNNLNVAEEKYREALEKGDVTAQIALQPALKFNGGGHINHS IFWTNLSPN--GGGEPQGELLEAIKRDFGSFAKFKEKLTAVSVGVQGSGW GWLGFNKEQGRLQIAACSNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVR PDYLKAIWNVINWENVTARYTACSK------- >gi|2780818|pdb|1QNM|A_1:198 Chain A, Human Manganese Superoxide Dismutase Mutant Q143ngi|2780819|pdb|1QNM|B Chain B, Human Manganese Superoxide Dismutase Mutant Q143n ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAY VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNNDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >gi|1711437|sp|P54375|SODM_BACSU_1:198 SUPEROXIDE DISMUTASE [MN] (GENERAL STRESS PROTEIN 24) (GSP24)gi|7433327|pir||B69709 superoxide dismutase (EC 1.15.1.1) (Mn) sodA - Bacillus subtilisgi|1303851|dbj|BAA12507.1| (D84432) YqgD [Bacillus subtilis]gi|2634935|emb|CAB14432.1| (Z99116) superoxide dismutase [Bacillus subtilis] ---------------MAYELPELPYAYDALEPHIDKETMTIHHTKHHNTY VTNLNKAVEGNTALANKSVEELVAdldsvpeNIRTAVRNNGGGHANHKLF WTLLSPN--GGGEPTGALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAW LVVN--NGKLEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPDY ISAFWNVVNWDEVARLY------------sdenngtnkvlimgpcffmss fyisrfe >gi|1174386|sp|P41982|SODM_RABIT_5:202 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|454175|gb|AAA31401.1| (L28808) manganese superoxide dismutase [Oryctolagus cuniculus] hgrg---------------MKHSLPDLPYDYGALEPHINAQIMELHHSKH HAAYVNNLNATEEKYREALARGDVTAHVALQPALKFKGGGHINHTIFWTN LSPN--GGGEPKGELLEAIKRDFGSFDKFKERLTAVSVGVQGSGWGWLGF NKEQGHLQIAACANQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLK AIWNVITWENVTERYMACK-------- >gi|134640|sp|P23744|SODF_METJ_2:202 SUPEROXIDE DISMUTASE [MN-FE]gi|95281|pir||A38461 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Methylomonas sp a-----------------YTLPPLDYAYTALEPHIDAQTMEIHHTKHHQT YINNVNAALEGTSFANEPVEALLQKldslpeNLRGPVRNNGGGHANHSLF WKVLTPN--GGGEPKGALADAIKSDIGGLDTFKEAFTKAALTRFGSGWAW LSVTP-EKKLVVESTGNQDSPLSTGNTPILGLDVWEHAYYLKYQNRRPEY IGAFFNVVNWDEVSRRYQEALA------- >gi|7555818|gb|AAC60522.2|_10:222 (S67818) manganous superoxide dismutase; MnSOD [Bos taurus] mlsraacst-SRRLVPALSVLGSRQKHSLPDLPYDYGALEPHINAQIMQL HHSKHHAAYVNNLNVAEEKYREALEKGDVTAQIALQPALKVNGGGHINHS IFWTNLSPN--GGGEPQGELLEAIKRDFGSFAKFKEKLTAVSVGVQGSGW GWLGFNKEQGRLQIAACSNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVR PDYLKAIWNVINWENVTARYTACSK------- >gi|401109|sp|P31108|SODF_LEGPN_1:192 SUPEROXIDE DISMUTASE [FE]gi|78086|pir||JS0749 superoxide dismutase (EC 1.15.1.1) (Fe) - Legionella pneumophilagi|216769|dbj|BAA02306.1| (D12922) iron superoxide dismutase (Fe-SOD) [Legionella pneumophila]gi|744306|prf||2014300A Fe superoxide dismutase [Legionella pneumophila] ---------------MTFTLPQLPYALDALAPHVSKETLEYHYGKHHNTY VTNLNKLIPGTEFESMTLEEI-IMKAKGGIFNNAAQVWNHTFYWHSMSPN --GGGEPKGRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLVQDQ-S GALKIINTSNAGTPMTEGLNALLTCDVWEHAYYIDYRNRRPDYIEAFWSL VNWDFASSNLK----------- >gi|2507402|sp|P53652|SODM_PSEAE_1:203 SUPEROXIDE DISMUTASE [MN]gi|2117673|pir||JC4981 superoxide dismutase (EC 1.15.1.1) (Mn) - Pseudomonas aeruginosagi|1628613|gb|AAB17391.1| (U72494) Mn superoxide dismutase [Pseudomonas aeruginosa] ---------------MPHALPPLPYAYDALEPHIDALTMEIHHSKHHQTY VNNLNAALEGTPYAEQPVESLLRQlaglpeKLRTPVVNNGGGHANHSLFW TVMSPQ--GGGRPDGDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWL SVTP-QGSLLVESSGNQDSPLMNGNTPILGLDVWEHAYYLKYQNRRPEYI GAFYNVIDWREVARRYAQALA------- >gi|134667|sp|P28764|SODM_LISMO_1:202 SUPEROXIDE DISMUTASE [MN]gi|98698|pir||JC1272 superoxide dismutase (EC 1.15.1.1) (Mn) - Listeria monocytogenesgi|149683|gb|AAA25292.1| (M80526) superoxide dismutase [Listeria monocytogenes] ---------------MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNTY VTKLNEAVAGHPELASKSAEELVTnldsvpeDIRGAVRNHGGGHANHTLF WSILSPN--GGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAW LVVN--DGKLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEY IETFWNVINWDEANKRFDAAK-------- >gi|2500825|sp|P77928|SODG_PSEPU_1:192 SUPEROXIDE DISMUTASE [FE]gi|1498060|gb|AAB06332.1| (U64798) iron superoxide dismutase [Pseudomonas putida] ---------------MAFELPPLPYAHDALQPHISKETLEFHHDKHHNTY VVNLNNLVPGTEFEGKTLEEI-VKTSSGGIFNNAAQVWNHTFYWNCLAPN --AGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKA-D GSLALASTIGAGCPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWNL VNWAFVAEQFE-----------gktfka >gi|4106403|gb|AAD02836.1|_1:193 (AF077373) iron superoxide dismutase FeSOD [Azotobacter vinelandii]gi|6552344|dbj|BAA88212.1| (AB025798) iron superoxide dismutase [Azotobacter vinelandii] ---------------MAFELPPLPYEKNALEPYISTETLEYHYGKHHNTY VVNLNNLIPGTEFEGKSLEDI-VKTSSGGIFNNAAQVWNHTFYWNGLKPQ --GGGQPTGPLADAINAAFGSFDKFKEEFTKVAIGTFGSGWAWLVKKA-D GSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWNL VNWDFVAANYAA---------- >gi|4581922|gb|AAD24796.1|AF121078_2_1:203 (AF121078) manganese superoxide dismutase [Pseudomonas syringae pv. syringae] ---------------MPYTLPALPYAYDALEPHIDAQTMEIHYTKHHQTY INNLNAAVEGTEFADWSVEKLVASvqqlpeNLRPAVINQGGGHANHSLFW EVMVPG--GGGLPTGAVASAINEQLGGYESFKEAFTKAALTRFGSGWAWL SVTP-DKKLVVESSGNQDSPLMNGNTPILGLDVWEHAYYLRYQNRRPEYI NAFYNVINWDEVSRRYQAALA------- >gi|6226770|sp|O54086|SODM_STRAG_5:202 SUPEROXIDE DISMUTASE [MN-FE] maii-------------------LPDLPYAYDALEPHIDAETMTLHHDKH HATYVANANAALEKHPEIGEDLEALLADvsqipeDIRQAVINNGGGHLNH ALFWELMSPE---ETQISQELSEDINATFGSFEDFKAAFTAAATGRFGSG WAWLVVNA-EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVR PNYIKAFFEIINWNKVNELYQAAKA------- >gi|7433329|pir||S20019_1:202 superoxide dismutase (EC 1.15.1.1) (Mn) - Listeria ivanovii ---------------MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNTY VTKLNEAVSGHAELASKPVEELVAnldsvpeEIRGAVRNHGGGHANHTLF WSILSPN--GGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAW LVVN--NGKLEIVSTANQDSPLSEGKTPVLGLDVWEHAYYLKFQNRRPEY IDTFWNVINWDERNKRFDAAK-------- >gi|134666|sp|P28763|SODM_LISIV_1:202 SUPEROXIDE DISMUTASE [MN]gi|44011|emb|CAA45406.1| (X64011) superoxide dismutase [Listeria ivanovii] ---------------MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNIY VTKLNEAVSGHAELASKPGEELVAnldsvpeEIRGAVRNHGGGHANHTLF WSSLSPN--GGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAW LVVN--NGKLEIVSTANQDSPLSEGKTPVLGLDVWEHAYYLKFQNRRPEY IDTFWNVINWDERNKRFDAAK-------- >gi|2765187|emb|CAA72899.1|_5:202 (Y12224) manganese-dependent superoxide dismutase [Streptococcus agalactiae] maii-------------------LPDLPYAYDALEPHIDAETMTLHHDKH HATYVANANAALEKHPEIGEDLEALLADvsqipeDIAQAVINNGGGHLNH ALFWELMSPE---ETQISQELSEDINATFGSFEDFKAAFTAAATGRFGSG WAWLVVNA-EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVR PNYIKAFFEIINWNKVNELYQAAKA------- >gi|4581924|gb|AAD24797.1|AF121079_1_1:191 (AF121079) iron-superoxide dismutase [Pseudomonas syringae pv. syringae] ---------------MAFELPPLPYEKTALAPHISAETLEYHHDKHHNTY VVNLNNLVPGTEFEGKTLEEI-VKTSSGGIFNNAAQVWNHTFYWNCLAPN --AGGEPTGALAEAINKAFGSFDKFKEEFSKTSIGTFGSGWGWLVKKA-D GSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWNL VNWDFVAKQF------------as >gi|2500831|sp|P77929|SODM_PSEPU_1:203 SUPEROXIDE DISMUTASE [MN]gi|1498062|gb|AAB06333.1| (AF102270) manganese superoxide dismutase [Pseudomonas putida] ---------------MPHTLPALPYAYDALEPHIDAQTMEIHHTKHHQTY VNGLNAAIEGTEWAEWPVEKLVGAvkqlpeSLRGAVTNHGGGHANHSLFW TVMSPQ--GGGEPHGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWL SVTP-QKTLVVESSGNQDSPLMFGNTPIFGLDVWEHAYYLKYQNRRPEYI GAFYNVIDWAEVERRYLEALK------- >gi|640118|pdb|1ISC|A_2:192 Chain A, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|640119|pdb|1ISC|B Chain B, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|640114|pdb|1ISA|A Chain A, Iron(Ii) Superoxide Dismutase (E.C.1.15.1.1)gi|640115|pdb|1ISA|B Chain B, Iron(Ii) Superoxide Dismutase (E.C.1.15.1.1)gi|640116|pdb|1ISB|A Chain A, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1)gi|640117|pdb|1ISB|B Chain B, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1) s-----------------FELPALPYAKDALAPHISAETIEYHYGKHHQT YVTNLNNLIKGTAFEGKSLEEI-IRSSEGGVFNNAAQVWNHTFYWNCLAP N--AGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNS- DGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWA LVNWEFVAKNLAA---------- >gi|134639|sp|P09157|SODF_ECOLI_3:193 SUPEROXIDE DISMUTASE [FE]gi|1070457|pir||DSECF superoxide dismutase (EC 1.15.1.1) (Fe) - Escherichia coligi|147842|gb|AAA24637.1| (J03511) superoxide dismutase (sodB) [Escherichia coli]gi|1742729|dbj|BAA15422.1| (D90809) Superoxide dismutase (EC 1.15.1.1) (Fe) [Escherichia coli]gi|1787946|gb|AAC74728.1| (AE000261) superoxide dismutase, iron [Escherichia coli] ms-----------------FELPALPYAKDALAPHISAETIEYHYGKHHQ TYVTNLNNLIKGTAFEGKSLEEI-IRSSEGGVFNNAAQVWNHTFYWNCLA PN--AGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNS -DGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW ALVNWEFVAKNLAA---------- >gi|2507403|sp|P09738|SODM_STRMU_5:201 SUPEROXIDE DISMUTASE [MN-FE]gi|282314|pir||A42710 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Streptococcus mutansgi|251295|gb|AAB22503.1| (S39782) manganese-type superoxide dismutase, Mn-SOD [Streptococcus mutans, GS-5, Peptide, 203 aa] mail-------------------LPDLPYAYDALEPYIDAETMTLHHDKH HATYVANANAALEKHPEIGENLEVLLADveqipaDIRQSLINNGGGHLNH ALFWELLSPE---KTKVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSG WAWLVVDK-EGKLEVTSTANQDTPISQGLKPILALDVWEHAYYLNYRNVR PNYIKAFFEVINWNTVARLYAEAL--------tk >gi|8347758|gb|AAF74770.1|AF264029_1_19:218 (AF264029) mitochondrial manganese superoxide dismutase precursor; MnSOD [Callinectes sapidus] mllaraflparslaaagl------------WCRQKHTLPDLPYDYGALEP TISAEIMQLHHSKHHQTYVNNLNVAEEKLAEAKEKGDVSTIISLAPALKF NGGGHINHSIFWQNLSAD---GGEPEGELLAAINRDFGSVENMKNQLSAQ TVAVQGSGWGWLGYNKQKGTLQIATCPNQDPLEATtGLVPLFGIDVWEHA YYLQYKNVRPDYVKAIWNVANWKDITARFNAAK-------- >gi|134645|sp|P09223|SODF_PSEPU_2:188 SUPEROXIDE DISMUTASE [FE]gi|77812|pir||S00157 superoxide dismutase (EC 1.15.1.1) (Fe) - Pseudomonas sp. (Pseudomonas ovalis) a-----------------FELPPLPYAHDALQPHISKETLEYHHDKHHNT YVVNLNNLVPGTPEFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP D--GGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWAWLVKA-- DGSLALCSTIGAGAPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN LVNWAFVAE--------------egktfka >gi|8977980|emb|CAB95744.1|_1:199 (AJ276960) superoxide dismutase [Staphylococcus xylosus] ---------------MAFELPNLPYGFDALEPHIDQQTMEIHHGKHHNTY VTKLNAAVEGTDLESKSIEEIVANldsvpeNIQTAVRNNGGGHLNHSLFW ELLTPN----SEEKGTVVDKIKEQWGSLDAFKEEFADKAAARFGSGWAWL VVN--NGNLEIVTTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYI SAFWNVVNWEKVDELYNAAK-------- >gi|349942|pdb|3SDP|A_2:188 Chain A, Iron Superoxide Dismutase (E.C.1.15.1.1)gi|349943|pdb|3SDP|B Chain B, Iron Superoxide Dismutase (E.C.1.15.1.1) a-----------------FELPPLPYAHDALQPHISKETLEYHHDKHHNT YVVNLNNLVPGTPEFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP D--AGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWAWLVKA-- DGSLALCSTIGAGAPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN LVNWAFVAE--------------egktfka >gi|7473947|pir||B75415_1:211 superoxide dismutase (sodA), Mn family - Deinococcus radiodurans (strain R1)gi|6459027|gb|AAF10851.1|AE001975_5 (AE001975) superoxide dismutase (sodA), Mn family [Deinococcus radiodurans] ---------------MAYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTY VDNANKALEGTEFADLPVEQLIQQldrvpaDKKGALRNNAGGHANHSMFW QIMGQGQGQNGanQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWA WLVVK--DGKLDVVSTANQDNPLMGEAiagvsgTPILGVDVWEHAYYLNY QNRRPDYLAAFWNVVNWDEVSKRYAAAK-------- >gi|77595|pir||S07147_4:203 superoxide dismutase (EC 1.15.1.1) (Mn) - Thermus aquaticusgi|640304|pdb|1MNG|A Chain A, Manganese Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|640305|pdb|1MNG|B Chain B, Manganese Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|494880|pdb|3MDS|A Chain A, Maganese Superoxide Dismutase From Thermus Thermophilusgi|494881|pdb|3MDS|B Chain B, Maganese Superoxide Dismutase From Thermus Thermophilus pyp-----------------FKLPDLGYPYEALEPHIDAKTMEIHHQKHH GAYVTNLNAALEKYPYLHGVEVEVLLRhlaalpqDIQTAVRNNGGGHLNH SLFWRLLTPG--GAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSG WAWLVKDP-FGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRR ADYLQAIWNVLNWDVAEEFFKKA--------- >gi|1711456|sp|P09214|SODM_THETH_5:204 SUPEROXIDE DISMUTASE [MN]gi|3062848|dbj|BAA25701.1| (AB010884) manganese superoxide dismutase [Thermus thermophilus] mpyp-----------------FKLPDLGYPYEALEPHIDAKTMEIHHQKH HGAYVTNLNAALEKYPYLHGVEVEVLLRhlaalpqDIQTAVRNNGGGHLN HSLFWRLLTPG--GAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGS GWAWLVKDP-FGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNR RADYLQAIWNVLNWDVAEEFFKKA--------- >gi|100284|pir||A39267_10:225 superoxide dismutase (EC 1.15.1.1) (Fe) - curled-leaved tobacco mtmitnsssVPGDPLESTCRGGGGAKFELQPPPYPMDALEPHMSSRTFEF HWGKHHRAYVDNLNKQIDGTELDGKTLEDIILVtynkGAPLPAFNNAAQA WNHQFFWESMKPN--GGGEPSGELLELINRDFGSYDAFVKEFKAAAATQF GSGWAWLAYKPEEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQ NRRPDYISIFMEkLVSWEAVSSRLKAA---------ta >gi|4321778|gb|AAD15825.1|_1:197 (AF061031) superoxide dismutase [Mycobacterium smegmatis] --------------MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATY VKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSPN --GGDKPTGELAAAIDDQFGSFDKFQAQFTAATNGLQGSGWAVLGYDSLG GRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWDDVQNRFAAA---------tsktnglifg >gi|2117676|pir||JC4611_21:234 superoxide dismutase (EC 1.15.1.1) (Fe) precursor - Chlamydomonas reinhardtiigi|726293|gb|AAB04944.1| (U22416) superoxide dismutase precursor [Chlamydomonas reinhardtii] malamkaqasslvagqrrav---RPASGRRAVITRAALELKSPPYALDAL EPHMSKQTLEFHWGKHHRAYVDNMNKQVAGTPLDGKSLEEIVLAswnnGQ PTPVFNNAAQVWNHTFFWESMKPN--GGGAPTGALAEAITRDFGSLDKFK EEFKQAGMTQFGSGWAWLNADK-TGKLSISKSPNAVNPVVEGKTPILTVD VWEHAYYIDVQNRRPDYITTFMEkLINWDAVAQRYARATK------- >gi|8347760|gb|AAF74771.1|AF264030_1_83:282 (AF264030) cytosolic manganese superoxide dismutase precursor; MnSOD [Callinectes sapidus] nassearsiremaeyvegiqvkqagqvitgqvnpqvaamfshikaelgee --------------RGVHSLPPLGYDYGALEPHICTTIMQIHHTKHHQGY INNLKAAVEKLTEAEKANDIGAMNALLPAIKFNGGGHLNHTIFWTNMAPG --AGGEPSGSIAEMINRDFGSFQSFKEKFSGASVAVKGSGWGWLGYCPKD DKLAVATCQNQDPLQIThGLVPLLGLDVWEHAYYLQYKNLRADYVKAFFN VINWANVNERFEAARK-------aagh >gi|4325247|gb|AAD17309.1|_1:195 (AF121672) superoxide dismutase SodA [Staphylococcus aureus] ---------------MAFELPKLPYAFDALEPHFDKETMEIHHDRHHNTY VTKLNAAVEGTDLESKSIEEIVANldsvpaNIQTAVRNNGGGHLNHSLFW ELLSPN----SEEKGTVVEKIKEQWGSLEEFKKEFADKAAARFGSGWAWL VVN--NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYI GAFWNVVNWEKVDELY------------natk >gi|1084032|pir||A53294_1:203 superoxide dismutase (EC 1.15.1.1) (Mn) - Pseudomonas aeruginosa ---------------MPHALPPLPYAYDALEPHIDALTMEIHHSKHHQTY VNNLNARWRARPMPSSRWKVCCGNwlvcrrKLRTPVVNNGGGHANHSLFW TVMSPQ--GGGRPDGDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWL SVTP-QGSLLVESSGNQDSPLMNGNTPILGLDVWEHAYYLKYQNRRPEYI GAFYNVIDWREVARRYAQALA------- >gi|2808462|emb|CAA11227.1|_5:201 (AJ223292) superoxide dismutase [Streptococcus pyogenes] maii-------------------LPELPYAYDALEPQFDAETMTLHHDKH HATYVANTDAALEKHPEIGENLEELLADvpkipeDIRQALINNGGGHLNH ALFWELLSPE---KQDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSG WAWLVVNK-EGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVR PNYIKAFFEIINWKKVSALYQAAK-------- >gi|586007|sp|P37369|SODF_BORPE_1:191 SUPEROXIDE DISMUTASE [FE]gi|2117677|pir||I40319 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Bordetella pertussisgi|144059|gb|AAC36882.1| (M83095) superoxide dismutase [Bordetella pertussis]gi|534896|emb|CAA44779.1| (X63055) Superoxide Dismutase [Bordetella pertussis] ---------------MAHTLPPLPYALDALAPRISKETLEFHYGKHHQTY VTNLNNLVPGTEFENLSLEEI-VKKSSGGVFNNAAQVWNHTFYWNSLSPN --GGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGNFGSGWTWLVKKA-D GTLDIVNTSNAATPLTTADKALLTCDVWEHAYYIDYRNARPKYLENFWAL VNWEFAAKNF------------a >gi|134642|sp|P22302|SODF_NICPL_1:200 SUPEROXIDE DISMUTASE [FE], CHLOROPLASTgi|170235|gb|AAA34074.1| (M55909) Fe-superoxide dismutase [Nicotiana plumbaginifolia] ----------------KFELQPPPYPMDALEPHMSSRTFEFHWGKHHRAY VDNLNKQIDGTELDGKTLEDIILVtynkGAPLPAFNNAAQAWNHQFFWES MKPN--GGGEPSGELLELINRDFGSYDAFVKEFKAAAATQFGSGWAWLAY KPEEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISI FMEkLVSWEAVSSRLKAA---------ta >gi|7379798|emb|CAB84366.1|_1:193 (AL162755) putative superoxide dismutase [Neisseria meningitidis] ---------------MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTY ITNLNNQIKGTEFENLPLEEI-VKKSSGGVFNNAAQTWNHTFYWLGFTPK --GQGKPSGELAAAIDAKWGSFEKFQEAFSACAAGTFGSGWAWLVKTP-A GGLDLVSTSNAATPLTTENTPLLTCDVWEHAYYIDYRNSRPNYLKGFWEI VNWDEVAKRFAA----------ls >gi|1711423|sp|P50059|SOD2_PLEBO_1:205 SUPEROXIDE DISMUTASE [MN] 2gi|608554|gb|AAA69952.1| (U17610) superoxide dismutase [Plectonema boryanum] ---------------MAFELKPLPYAYDALEPYIDATTMQLHHDKHHAAY VNNLNAAIEKYSDLQSMSVEDLVThldrvpeDVRTTVRNNAGGHVNHTMF WEIMGAN--GSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVW LVRSQ-QGDLQILSTPNQDSPLIEGHTPIMGNDVWEHAYYLKYQNRRPEY LNAWWNVLNWEEINRRFDAAMSG------h >gi|1174382|sp|Q00637|SODM_DROME_7:214 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|409457|gb|AAA20533.1| (L18947) Mn-superoxide dismutase [Drosophila melanogaster] mfvark-----ISPNCKPGVRGKHTLPKLPYDYAALEPIICREIMELHHQ KHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFW QNLSPN---KTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWL GFNKKSGKLQLAALPNQDPLEAStGLIPLFGIDVWEHAYYLQYKNVRPSY VEAIWDIANWDDISCRFQEAKK-------lgc >gi|5880381|gb|AAD54651.1|AF085191_1_5:195 (AF085191) manganese superoxide dismutase Mn-SOD [Vibrio parahaemolyticus] menr--------------VMAFELPALPYAKDALEPHISAETLDYHHGKH HNTYVVKLNGLIPGTEFEGKTLEEI-IKTSTGGVFNNAAQIWNHTFYWHC LAPN--AGGEPTGAVADAINAAFGSFEEFKAKFTDAAINNFGSSWTWLVK KA-DGSLEIVNTSNAATPLTEeGTTPLLTVDLWEHAYYIDYRNVRPDYMN GFWALVNWDFVAE--------------drqls >gi|1711455|sp|P53653|SODM_THEAQ_5:204 SUPEROXIDE DISMUTASE [MN]gi|217184|dbj|BAA02655.1| (D13387) superoxide dismutase [Thermus aquaticus]gi|1311485|dbj|BAA12703.1| (D84646) manganese superoxide dismutase [Thermus aquaticus] mpyp-----------------FKLPELGYPYEALEPHIDARTMEIHHQKH HGAYVTNLNAALEKYPYLQGAEVETLLRhltalpaDIQAAVRNNGGGHLN HSLFWRLLTPG--GAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGS GWAWLVKDP-FGKLHVISTANQDNPVMGGFAPIVGIDVWEHAYYLKYQNR RADYLQAIWNVLNWDVAEEIYKGA--------- >gi|2500829|sp|Q59519|SODM_MYCFO_1:197 SUPEROXIDE DISMUTASE [MN]gi|2127457|pir||S60669 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium fortuitumgi|950079|emb|CAA50266.1| (X70914) superoxide dismutase [Mycobacterium fortuitum]gi|1586499|prf||2204221A superoxide dismutase [Mycobacterium fortuitum] --------------MAEYTLPDLDYDYGALEPHISGQINELHHSKHHAAY VKGVNDAVAKLDEARANGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG DRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWEDVQNRYAAA---------tsktnglifg >gi|1078795|pir||S55499_1:197 superoxide dismutase (EC 1.15.1.1) (Fe) - Plasmodium falciparumgi|861077|emb|CAA89971.1| (Z49819) Fe-superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMK-------k >gi|9656592|gb|AAF95193.1|_1:194 (AE004279) superoxide dismutase, Fe [Vibrio cholerae] ---------------MAFELPALPYAKDALEPHISAETLDFHHGKHHNTY VVKLNGLIPGTEFENKSLEEI-IKTSTGGIFNNAAQVWNHTFYWHCLSPN --GGGEPTGAVAEAINAAFGSFADFKAKFTDSAINNFGSSWTWLVKKA-D GTLAITNTSNAATPLTEeGVTPLLTVDLWEHAYYIDYRNVRPDYMNGFWA LVNWDFVAQNLAK---------- >gi|4139274|gb|AAD03746.1|_1:197 (AF113142) superoxide dismutase [Plasmodium falciparum]gi|4139276|gb|AAD03747.1| (AF113143) superoxide dismutase [Plasmodium falciparum]gi|4139278|gb|AAD03748.1| (AF113144) superoxide dismutase [Plasmodium falciparum]gi|4139280|gb|AAD03749.1| (AF113145) superoxide dismutase [Plasmodium falciparum]gi|4139282|gb|AAD03750.1| (AF113146) superoxide dismutase [Plasmodium falciparum]gi|4139284|gb|AAD03751.1| (AF113147) superoxide dismutase [Plasmodium falciparum]gi|4139286|gb|AAD03752.1| (AF113148) superoxide dismutase [Plasmodium falciparum]gi|4139288|gb|AAD03753.1| (AF113149) superoxide dismutase [Plasmodium falciparum]gi|4139290|gb|AAD03754.1| (AF113150) superoxide dismutase [Plasmodium falciparum]gi|4139292|gb|AAD03755.1| (AF113151) superoxide dismutase [Plasmodium falciparum]gi|4139294|gb|AAD03756.1| (AF113152) superoxide dismutase [Plasmodium falciparum]gi|4139296|gb|AAD03757.1| (AF113153) superoxide dismutase [Plasmodium falcipar! um]gi|4139298|gb|AAD03758.1| (AF113154) superoxide dismutase [Plasmodium falciparum]gi|4139300|gb|AAD03759.1| (AF113155) superoxide dismutase [Plasmodium falciparum]gi|4139302|gb|AAD03760.1| (AF113156) superoxide dismutase [Plasmodium falciparum]gi|5453297|gb|AAD43521.1| (AF139526) superoxide dismutase [Plasmodium ovale]gi|5453300|gb|AAD43524.1| (AF139529) superoxide dismutase [Plasmodium vivax] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|4139318|gb|AAD03768.1|_1:197 (AF113164) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHISEETINFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|514917|gb|AAA28694.1|_15:214 (L34276) manganese superoxide dismutase [Drosophila melanogaster]gi|7302882|gb|AAF57955.1| (AE003805) Sod2 gene product [Drosophila melanogaster] mfvarkisqtasla-------------VRGKHTLPKLPYDYAALEPIICR EIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGG HINHTIFWQNLSPN---KTQPSDDLKKAIESQWKSLEEFKKELTTLTVAV QGSGWGWLGFNKKSGKLQLAALPNQDPLEAStGLIPLFGIDVWEHAYYLQ YKNVRPSYVEAIWDIANWDDISCRFQEAKK-------lgc >gi|4139304|gb|AAD03761.1|_1:197 (AF113157) superoxide dismutase [Plasmodium falciparum]gi|4139306|gb|AAD03762.1| (AF113158) superoxide dismutase [Plasmodium falciparum]gi|4139308|gb|AAD03763.1| (AF113159) superoxide dismutase [Plasmodium falciparum]gi|4139310|gb|AAD03764.1| (AF113160) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPG --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|4139312|gb|AAD03765.1|_1:197 (AF113161) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPG --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTSIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|4139324|gb|AAD03771.1|_1:197 (AF113167) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYTDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|7649157|gb|AAF65768.1|AF242310_1_36:230 (AF242310) manganese superoxide dismutase [Euphorbia esula] malrslvtrrtlglasnsaklvsgsavaqlrgfkt--------------- --FSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLHEAT EKGDSSTVVKLQSAIKFNGGGHINHSIFWKNLAPVGEGGGElPHGSLGWA IDKDFGSLEKLIQKMNTQGAAVQGSGWVWLGLEKESKRLVVETTSNQDPL VTKgPLVPLVGIDVWEHAYYLQYKNVRPDYLKNIWKVVNWKYASDIY--- ---------anecpsa >gi|2144131|pir||S65795_11:201 superoxide dismutase (EC 1.15.1.1) (Mn) - guinea pig (fragment) sasrrlapal---------GILGVRQKHSLPDLPYDYGALQPHINAEIMQ LHHSKHHAAYLNNLNIAEEKYQEALAKGDVTAQVALQPALKFNGGGHINH SIFWTNLSPN--GGGEPKGELLEAIKRDFGSFDKFKEKLTAVSVGVQGSG WGWLGFNKERGCLQIAACSNQDPLQGTtGLIPLLGIDVWEHAYYLQLKNV RPDYLKAIWKVI---------------------kns >gi|1351083|sp|P49114|SODM_CAVPO_18:208 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|1066118|gb|AAC52719.1| (U39843) manganese superoxide dismutase [Cavia porcellus] mlcravcsasrrlapal---------GILGVRQKHSLPDLPYDYGALQPH INAEIMQLHHSKHHAAYLNNLNIAEEKYQEALAKGDVTAQVALQPALKFN GGGHINHSIFWTNLSPN--GGGEPKGELLEAIKRDFGSFDKFKEKLTAVS VGVQGSGWGWLGFNKERGCLQIAACSNQDPLQGTtGLIPLLGIDVWEHAY YLQLKNVRPDYLKAIWKVI---------------------kns >gi|4139314|gb|AAD03766.1|_1:197 (AF113162) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFEEQFSNILCGHFGSGWGWLALNN-N NKLAILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|7433345|pir||T06801_31:231 probable superoxide dismutase (EC 1.15.1.1) (Mn) precursor - wheatgi|1654387|gb|AAB68036.1| (U73172) manganese superoxide dismutase [Triticum aestivum] malrtlaakktlglalggarplaaargvat-----------------FTL PDLPYDFGALEPAVSGEIMRLHHQKHHATYVANYNKALEQLDAAVSKGDA SAVVHLQSAIKFNGGGHVNHSIFWKNLKPISEGGGEPPhGKLGWAIDEDF GSIEKLIKKMNAEGAALQGSGWVWLALDKEAKKLSVETTPNQDPLVTKgs NLYPLLGIDVWEHAYYLQYKNVRPDYLTNIWKVVNWKYAGEEYEKVLA-- ----- >gi|4139322|gb|AAD03770.1|_1:197 (AF113166) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHVSEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|6016702|gb|AAF01529.1|AC009991_25_26:228 (AC009991) putative [Mn] superoxide dismutase [Arabidopsis thaliana] maircvasrktlaglketssrllri------------RGIQTFTLPDLPY DYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVK LQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPkGSLGSAIDAHFGSLEG LVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGslVPL VGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEK---------- enn >gi|8134711|sp|O86165|SODM_MYCLP_1:197 SUPEROXIDE DISMUTASE [MN]gi|3228264|dbj|BAA28850.1| (D13288) Mn superoxide dismutase [Mycobacterium lepraemurium] --------------MAEYTLPDLDWDYEALEPHISGQINEIHHTKHHATY VKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSLWWKNLSPD --GGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLG SRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWADVQKRYTAA---------tsktqglifg >gi|4139316|gb|AAD03767.1|_1:197 (AF113163) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYINYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|1351085|sp|P47201|SODM_MYCAV_1:197 SUPEROXIDE DISMUTASE [MN]gi|555746|gb|AAB08770.1| (U11550) superoxide dismutase [Mycobacterium avium] --------------MAEYTLPDLDWDYAALEPHISGQINEIHHTKHHATY VKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLG SRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWADVQKRYAAA---------tskaqglifg >gi|1711422|sp|P50058|SOD1_PLEBO_45:247 SUPEROXIDE DISMUTASE [MN] 1 PRECURSORgi|608551|gb|AAA69950.1| (U17609) superoxide dismutase precursor [Plectonema boryanum] mqttfrrililfvgllvplffacqsnsqvdaapsaapqlsaspa------ ------------KLDPLPYDYAALEPYIDAQTMRLHHDKHHATYVNNINE TLKAYPDLQKQSVDSLIQnlnqvpeAIRTKIRNNGGGHVNHTMFWQIMAP K--AGGTPTGAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLVSDR- QGKLSITSTANQDNPLMSnpNAYPILGNDVWEHAYYLKYQNRRAEYLTNW WNVVNWQAVNQRYAQAQR-------k >gi|4139320|gb|AAD03769.1|_1:197 (AF113165) superoxide dismutase [Plasmodium falciparum] ---------------MVITLPKLKYALNALSPHIGEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|9107839|gb|AAF85411.1|AE004068_7_1:202 (AE004068) superoxide dismutase [MN] [Xylella fastidiosa] ---------------MAYTLPILPYAYDALQPHIDAQTMEIHYTKHHATY INNLNAALEGTEYADLPIEELLRNlkslpeSLQGPVRNNGGGCVNHSLFW TVMAQG--GGGKPKGEVAKAIDQQLGGFETFKDAFTKAALSRFGSGWSLL NVTP-SKTLVVESSANQDSPLCDGKTPILCLDVWEHAYYLHYQNRRADYV NAFYNVINWDEVERRYVAAM--------s >gi|134643|sp|P09213|SODF_PHOLE_2:193 SUPEROXIDE DISMUTASE [FE]gi|79229|pir||A26707 superoxide dismutase (EC 1.15.1.1) (Fe) - Photobacterium leiognathi a-----------------FELPALPFAMNALEPHISQETLEYHYGKHHNT YVVKLNGLVEGTELAEKSLEEI-IKTSTGGVFNNAAQVWNHTFYWNCLAP N--AGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAINNFGSSWTWLVKNA- NGSLAIVNTSNAGCPITEeGVTPLLTVDLWEHAYYIDYRNLRPSYMDGFW ALVNWDFVSKNLAA---------- >gi|2500827|sp|P77968|SODF_SYNY3_1:199 SUPEROXIDE DISMUTASE [FE]gi|7433330|pir||S75466 superoxide dismutase (EC 1.15.1.1) (Mn) - Synechocystis sp. (strain PCC 6803)gi|1653111|dbj|BAA18027.1| (D90911) superoxide dismutase [Synechocystis sp.] ---------------MAYALPNLPYDYTALEPCISKSTLEFHHDKHHAAY VNNFNNAVAGTDLDNQSIEDVIKAvagdASKAGIFNNAAQAWNHSFYWNC MKPG--GGGQPSGALADKINADFGSFDAFVEAFKQAGATQFGSGWAWLVL D--NGTLKVTKTGNAENPMTAGQTPLLTMDVWEHAYYLDYQNRRPDYIAD FLGkLVNWDFVAANLAAA--------- >gi|5777414|emb|CAB53458.1|_3:200 (AJ249148) MnSOD [Hevea brasiliensis] qt-----------------FSLPDLPYDYGALEPAISGEIMQLHHQKHHQ TYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGGHVNHSIFWKNLA PVREGGGElPHGSLGWAIDADFGSLEKLIQLMNAEGVALQGSGWVWLALD KELKKLVVETTANQDPLVTKGPtlVPLLGIDVWEHAYYLQYKNVRPDYLK NIWKVMNWKYASEVYAK----------ecpss >gi|464775|sp|P35017|SODM_HEVBR_31:228 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|542013|pir||S39492 superoxide dismutase (EC 1.15.1.1) (Mn) - Para rubber treegi|348137|gb|AAA16792.1| (L11707) superoxide dismutase (manganese) [Hevea brasiliensis] malrslvtrknlpsafkaatglgqlrglqt-----------------FSL PDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLNDAIEKGDS AAVVKLQSAIKFNGGGHVNHSIFWKNLAPVREGGGElPHGSLGWAIDADF GSLEKLIQLMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGP tlVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAK----- -----ecpss >gi|7433342|pir||T06258_31:231 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - wheatgi|1621627|gb|AAB68035.1| (U72212) manganese superoxide dismutase [Triticum aestivum] malrtlaakktlglalggarppaaargvat-----------------FTL PDLPYDYGALEPAVSGEIMRLHHQKHHATYVANYNKALEQLDAAVSKGDA SAVVHLQSAIKFNGGGHVNHSIFWKNLKPISEGGGeAPHGKLGWAIDEDF GSIEKLIKKMNAEGAALQGSGWVWLALDKEAKRLSVETTPNQDPLVTKgs NLHPLLGIDVWEHAYYLQYKNVRPDYLTNIWKVVNWKYAGEEYEKVLA-- ----- >gi|7433350|pir||T08181_24:228 superoxide dismutase (EC 1.15.1.1) (Mn) - radishgi|3108345|gb|AAC15806.1| (AF061333) superoxide dismutase [Raphanus sativus] mairsvasrrtlaglketssrll----------GSRSIQTFTLPDLPYDY SALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASAVVKLQ SAIKFNGGGHVNHSIFWKNLAPVKEGGGEPPkGSLGGAIDTSFGSLEGLV KKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGslVPLVG IDVWEHAYYLQYKNVRPDYLKNVWKVINWKYASEVYEK----------ec k >gi|7226122|gb|AAF41295.1|_1:193 (AE002440) superoxide dismutase [Neisseria meningitidis MC58] ---------------MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTY ITNLNNQIKGTEFENLPLEEI-VKKSSGGVFNNAAQTWNHTFYWLGFTSK --GQGKPAGELAAAIDAKWGSFEKFQEAFNACAAGTFGSGWAWLVKTP-A GGLDLVSTSNAATPLTTENTPLLTCDVWEHAYYIDYRNSRPNYLKGFWEI VNWDEVAKRFAA----------ls >gi|401110|sp|P31161|SODM_CAEEL_9:221 SUPEROXIDE DISMUTASE [MN] 1, MITOCHONDRIAL PRECURSORgi|2117682|pir||JC5122 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - Caenorhabditis elegansgi|217298|dbj|BAA02363.1| (D12984) manganese superoxide dismutase precursor [Caenorhabditis elegans]gi|1408318|dbj|BAA12821.1| (D85499) manganese superoxide dismutase [Caenorhabditis elegans]gi|3875775|emb|CAB02913.1| (Z81057) predicted using Genefinder~similar to superoxide dismutase~cDNA EST yk174h1.5 comes from this gene~cDNA EST yk205g3.3 comes from this gene~cDNA EST yk205g3.5 comes from this gene~cDNA EST yk384h11.3 comes from this gene~cDNA EST yk384h11.5 com> mlqntvrcVSKLVQPITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLH HQKHHATYVNNLNQIEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSI FWTNLAKD---GGEPSAELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWG WLGYCPKGKILKVATCANQDPLEATtGLVPLFGIDVWEHAYYLQYKNVRP DYVNAIWKIANWKNVSERFAKAQQ------- >gi|7290015|gb|AAD00533.2|_2:211 (U82371) superoxide dismutase [Pyrobaculum aerophilum] m------------VTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQG YVNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAP PGKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPL EEQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWN VVNWDDVERRLQKALNGQIALKL >gi|3273751|gb|AAC24832.1|_26:228 (AF061518) manganese superoxide dismutase [Arabidopsis thaliana] maircvasrktlaglketssrllri------------RGIQTFTLPDLPY DYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVK LQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPkGSLGSAIDAHFGSLEG LVKKMSAEGAAVQGSGWVWLGLDKELKKLVFDTTANQDPLVTKGGslVPL VGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEK---------- enn >gi|1174391|sp|P41980|SODP_MAIZE_35:233 SUPEROXIDE DISMUTASE [MN] 3.4, MITOCHONDRIAL PRECURSORgi|539066|pir||B48684 superoxide dismutase (EC 1.15.1.1) (Mn) 3.2 precursor - maizegi|7548002|gb|AAA72022.2| (L19463) Mn-superoxide dismutase [Zea mays] malrtlasknalsfalggaarpsaasargvttva---------------- ---LPDLSYDFGALEPAISGEIMRLHHQKHHATYVGNYNKALEQLDAAVA KGDASAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPhGKLGWAI DEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLV TKGAslVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYENV LA------- >gi|1711440|sp|P50911|SODM_LACLC_1:206 SUPEROXIDE DISMUTASE [MN]gi|755210|gb|AAA85266.1| (U17388) superoxide dismutase [Lactococcus lactis] ---------------MAFTLPELPYAPNALEPFFDEATMRLHHGKHHQTY VNNLNAAIEKHNELDDLSLEELLTdlsaipeDIRTAVRNNGGGHLNHSQF WLWLRPNTDGSEnHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWA WLVVDE-AGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPD YIEAFFNLVNWDKVNELYAKAK-------- >gi|3719457|gb|AAC63379.1|_40:237 (AF094832) manganese superoxide dismutase [Zantedeschia aethiopica] mafqtllakkalgtalrngaaelglapalglcqarklqt----------- ------FSLPDLPYDYGSLEPAISGEIMRIHHQKHHQAYITNYNKALEQL DEAIAKGDASKVVGLQSAIKFNGGGHVNHSIFWKNLAPTKEGGGEPPkGA LGWAIDTDLGSFEALIQKISAEGAALQGSGWVWLALDKELKKVTVETTAN QDPLVTKGLhlVPLLGIDVWEHAYYLQYKNVRPDYLKNIWGVINWKYASE VYEK----------esa >gi|1711438|sp|P53642|SODM_BORPE_1:204 SUPEROXIDE DISMUTASE [MN]gi|1050437|emb|CAA59267.1| (X84800) manganese containing superoxide dismutase [Bordetella pertussis] ---------------MPYVLPALSYAYDALEPHIDARTMEIHHTRHHQTY VNGLNAALEGAGLDSEEPVEQLLRripalppGIHGAVRNHGGGHANHSLL WTVMSPS--GGGRPDGRLAADIQAQLGGHDAFQAAFTQAALGRFGSGWAW LTVTP-AGRLRVDSSANQDSPLMEGNTPILGLDVWEHAYYLQYQNRRPEY IEAFYRVVDWAEVARRYEIALA-------elgreaa >gi|1711453|sp|P53651|SODM_NOCAS_1:198 SUPEROXIDE DISMUTASE [MN]gi|484067|gb|AAA91964.1| (U02341) superoxide dismutase [Nocardia asteroides] --------------MAEYTLPDLDYDYSALEPHISGQINELHHSKHHAAY VAGANTALEKLEAAREAGDHSAIFLHEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPVGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDTLG QKLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVTAFWNV VNWADVQDRFGKAV--------nqgkglifg >gi|5453298|gb|AAD43522.1|_1:197 (AF139527) superoxide dismutase [Plasmodium ovale] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPRGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWSALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|2117680|pir||JC4351_1:198 superoxide dismutase (EC 1.15.1.1) (Mn) - Nocardia asteroides --------------VAEYTLPDLDYDYSALEPHISGQINELHHSKHHAAY VAGANTALEKLEAAREAGDHSAIFLHEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPVGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDTLG QKLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVTAFWNV VNWADVQDRFGKAV--------nqgkglifg >gi|1711424|sp|P50060|SOD3_PLEBO_35:232 SUPEROXIDE DISMUTASE [MN] 3 PRECURSORgi|608556|gb|AAA69953.1| (U17611) superoxide dismutase [Plectonema boryanum] astqqtpaqsptasptvstpvayvdrpltaspaq---------------- ---LPPLPYDAGALSKAIDAETMRIHHDRHHQTYVDNLNTALKDQPNLQN LSIEAMLRdlnavpeNIRNTIRNNAGGHLNHTIFWQIMSPD--GGGQPTG AIAQAINQTFGNFESFRKQFNEAGGDRFGSGWVWLVRNA-QGQLQIVSTA NQDNPIMEGNYPIMGNDVWEHAYYLRYQNRRADYLNNWWNVVNWNEINRR FQAA---------sqqqars >gi|5453299|gb|AAD43523.1|_1:197 (AF139528) superoxide dismutase [Plasmodium malariae] ---------------MVITLPKLKYALNALSPHISEETLNFHYNKHHAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIWEHAYCIDYRNDRASYVKAWWN LVNWNFANENLKKAMQ-------k >gi|542489|pir||S41320_23:227 superoxide dismutase (EC 1.15.1.1) (Mn) - Caenorhabditis elegans mfsilekkdfypylqsynffhl-----FFHFRVLAVRSKHTLPDLPFDYA DLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKEAIALQP ALKFNGGGHINHSIFWTNLAKD---GGEPSKELMDTIKRDFGSLDNLQKR LSDITIAVQGSGWGWLGYCKKDKILKIATCANQDP--LEGMVPLFGIDVW EHAYYLQYKNVRPDYVHAIWKIANWKNISERFANARQ------- >gi|7433347|pir||T04075_33:229 probable superoxide dismutase (EC 1.15.1.1) (Mn) 2 precursor - ricegi|601871|gb|AAA57131.1| (L34039) manganese superoxide dismutase [Oryza sativa] malrcvasrktlaaaalplaaaaaargvttva------------------ -LPDLPYDYGALEPAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKG DAPAIVHLQSAIKFNGGGHVNHSIFWNNLKPISEGGGEPPhAKLGWAIDE DFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTK GAnlVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYENA-- -------ta >gi|3915002|sp|O49066|SODM_CAPAN_23:225 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|7433349|pir||T08045 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - peppergi|2687665|gb|AAB88870.1| (AF036936) manganese superoxide dismutase [Capsicum annuum] malrnlmtkkpfagiltfrqql------------RCVQTFSLPDLSYDYG ALEPAISGEIMQLHHQKHHQTYITNYNNALQQLHDAINKGDSPTVAKLQG AIKFNGGGHINHSVFWKNLAPTREGGGEPPkGSLGSAIDTNFGSLEAVIQ KMNAEGAALQGSGWVWLGLDKELKRLVIETTANQDPLVIKgpNLVPLLGI DVWEHAYYLQYKNVKPDYLKNIWKVINWKYAAEVYEK----------ecp >gi|9789802|sp|Q9Y8H8|SODF_AERPE_2:209 SUPEROXIDE DISMUTASE [MN-FE]gi|7433336|pir||F72664 probable superoxide dismutase APE0741 - Aeropyrum pernix (strain K1)gi|4586634|dbj|BAA76442.1| (AB012621) superoxide dismutase [Aeropyrum pernix]gi|5104403|dbj|BAA79718.1| (AP000060) 214aa long hypothetical superoxide dismutase [Aeropyrum pernix] m------------VSFKRYELPPLPYNYNALEPYIIEEIMKLHHQKHHNT YVKGANAALEKIEKHLKGEIQIDVRAVMRDFSFNYAGHIMHTIFWPNMAP PGKGGGTPGGRVADLIEKQFGGFEKFKALFSAAAKTVEGVGWGVLAFDPL TEELRILQVEKHNVLMTAGLVPILVIDVWEHAYYLQYKNDRGSYVENWWN VVNWDDVEKRLEQALNNAKPL--yllpq >gi|1351086|sp|P41977|SODN_CAEEL_15:218 SUPEROXIDE DISMUTASE [MN] 2, MITOCHONDRIAL PRECURSORgi|1078882|pir||S52721 superoxide dismutase (EC 1.15.1.1) (Mn) - Caenorhabditis elegansgi|7433335|pir||T15456 hypothetical protein C08A9.1 - Caenorhabditis elegansgi|747708|emb|CAA54319.1| (X77021) manganese superoxide dismutase [Caenorhabditis elegans]gi|757774|emb|CAA59790.1| (X85790) mangenese superoxide dismutase [Caenorhabditis elegans]gi|2072755|gb|AAB53822.1| (U42844) Similar to superoxide dismutase [Caenorhabditis elegans] mlqstartasklvq------PVAGVLAVRSKHTLPDLPFDYADLEPVISH EIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKEAIALQPALKFNGGG HINHSIFWTNLAKD---GGEPSKELMDTIKRDFGSLDNLQKRLSDITIAV QGSGWGWLGYCKKDKILKIATCANQDP--LEGMVPLFGIDVWEHAYYLQY KNVRPDYVHAIWKIANWKNISERFANARQ------- >gi|3334338|sp|Q92450|SODM_ASPFU_1:217 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|1648970|gb|AAB60779.1| (U53561) manganese superoxide dismutase [Aspergillus fumigatus] --GTSPIQTPINTMSQQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTY VNGLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGGHINHSLFWKNLAPE KSGGGKIDQApvLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDG PKGKLDITTTHDQDP--VTGAAPVFGVDMWEHAYYLQYLNDKASYAKGIW NVINWAEAENRYIAGDKGGHP---fmkl >gi|1174389|sp|P41978|SODN_MAIZE_35:232 SUPEROXIDE DISMUTASE [MN] 3.2, MITOCHONDRIAL PRECURSORgi|539068|pir||C48684 superoxide dismutase (EC 1.15.1.1) (Mn) 3.4 precursor - maizegi|7548000|gb|AAA72020.2| (L19461) Mn-superoxide dismutase [Zea mays] malrtlasknalsfalggaarpsaasargvttva---------------- ---LPDLSYDFGALEPVISGEIMRLHHQKHHATYVVNYNKALEQLDAVVV KGDASAVVQLQGAIKFNGGGHFNHSIFWENLKPISEGGEPPHGKLGWAID EDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVT KGAslVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYENVL A------- >gi|628856|pir||S39871_3:206 superoxide dismutase (EC 1.15.1.1) (Mn) - Haemophilus influenzae (strain Eagan)gi|435653|emb|CAA52054.1| (X73832) manganese superoxide dismutase [Haemophilus influenzae] ms-----------------YTLPELGYAYNALEPHFDAQTMEIHHSKHHQ AYVNNANAALEGLPAELVEMYPGHLIsnldkipaEKRGALRNNAGGHTNH SLFWKSLK----KGTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSG WAWLVLTA-EGKLAVVSTANQDNPLMGKEvagcegFPLLGLDVWEHAYYL KFQNRRPDYIKEFWNVVNWDFVAERFEQ----------knstl >gi|1174383|sp|P43725|SODM_HAEIN_3:206 SUPEROXIDE DISMUTASE [MN]gi|1075332|pir||C64182 superoxide dismutase (EC 1.15.1.1) (Mn) - Haemophilus influenzae (strain Rd KW20)gi|1574643|gb|AAC22745.1| (U32789) superoxide dismutase (sodA) [Haemophilus influenzae Rd] ms-----------------YTLPELGYAYNALEPHFDAQTMEIHHSKHHQ AYVNNANAALEGLPAELVEMYPGHLIsnldkipaEKRGALRNNAGGHTNH SLFWKSLK----KGTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSG WAWLVLTA-EGKLAVVSTANQDNPLMGKEvagcegFPLLGLDVWEHAYYL KFQNRRPDYIKEFWNVVNWDFVAERFEQ----------ktahsncak >gi|7433348|pir||T04312_33:229 probable superoxide dismutase (EC 1.15.1.1) (Mn) precursor - ricegi|349104|gb|AAA62657.1| (L19436) manganese-superoxide dismutase [Oryza sativa]gi|6440980|dbj|BAA86897.1| (AB026725) manganese-superoxide dismutase [Oryza sativa] malrtlasrktlaaaalplaaaaaargvttva------------------ -LPDLPYDYGALEPAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKG DAPAIVHLQSAIKFNGGGHVNHSIFWNNLKPISEGGGDPPhAKLGWAIDE DFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTK GAnlVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYENA-- -------ta >gi|6006619|emb|CAB56851.1|_14:225 (AJ238316) manganese superoxide dismutase 1 [Prunus persica] malrtlvsrrtla---TGLGFRQQLRGLQTFSLPDLPYNYGALEPAISGD IMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGH INHSIFWKNLAPVREGGGEPPkGSLGWAIDTNFGSLEALVQKMNAEGAAL QGSGWVWLALDKELKKLVVETTANQDPLVTKGPtlVPLLGIDVWEHAYYL QYKNVRPDYLKNIWKVINWKYASEVYEK----------esp >gi|134647|sp|P18655|SODF_SYNP7_3:201 SUPEROXIDE DISMUTASE [FE]gi|79688|pir||S04423 superoxide dismutase (EC 1.15.1.1) (Fe) - Synechococcus spgi|6018363|emb|CAB57855.1| (X17431) superoxide dismutase [Synechococcus PCC6301] ms-----------------YELPALPFDYTALAPYITKETLEFHHDKHHA AYVNNYNNAVKDTDLDGQPIEAVIKAiagdASKAGLFNNAAQAWNHSFYW NSIKPN--GGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWL VLD--NGTLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYI STFVEkLANWDFASANYAAAIA------- >gi|134641|sp|P18868|SODF_METTH_9:202 SUPEROXIDE DISMUTASE [FE]gi|80947|pir||JQ0456 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Methanobacterium thermoautotrophicumgi|7433328|pir||F69080 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Methanobacterium thermoautotrophicum (strain Delta H)gi|216771|dbj|BAA00489.1| (D00614) superoxide dismutase [Methanobacterium thermoautotrophicum]gi|2621202|gb|AAB84666.1| (AE000804) superoxide dismutase (Fe/Mn) [Methanobacterium thermoautotrophicum] mndlekkf-----------------YELPELPYPYDALEPHISREQLTIH HQKHHQAYVDGANALLRKLDEARESDTDVDIKAALKELSFHVGGYVLHLF FWGNMGPADECGGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWA VLTYCQRTDRLFIMQVEKHNVNVIPHFRILLVLDVWEHAYYIDYRNVRPD YVEAFWNIVNWKEVEKRFE-----------dil >gi|7190607|gb|AAF39404.1|_8:207 (AE002324) superoxide dismutase [Chlamydia muridarum] mamvfss-----------------YKLPDLPYDYDALEPVISAEIMHLHH QKHHQGYINNLNEALKSLDVASATQDLTGLIAINPALRFNGGGHINHSLF WEMLAPQNKGGGTPPRHeLLKLIEKFWGSFDNFLKNFISSSAAVQGSGWG WLAFCPKKQELMIQTTANQDPLEATtGMIPLLGVDVWEHAYYLQYKNARL DYLKNFPSIINWDYIESRFVEMSK------- >gi|134668|sp|P09233|SODM_MAIZE_36:235 SUPEROXIDE DISMUTASE [MN] 3.1, MITOCHONDRIAL PRECURSORgi|22481|emb|CAA31058.1| (X12540) superoxide dismutase-3 precursor (AA -32 to 203) [Zea mays] malrtlaskkvlsfpfggagrplaaaasargvttv--------------- ---TLPDLSYDFGALEPAISGEIMRLHHQKHHATYVANYNKALEQLETAV SKGDASAVVQLQAAIKFNGGGHVNHSIFWKNLKPISEGGGEPPhGKLGWA IDEDFGSFEALVKKMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPL VTKGAslVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYEN VLA------- >gi|3746358|gb|AAC63943.1|_1:201 (AF029915) superoxide dismutase [Toxoplasma gondii] ---------------MVFTLPPLPYAHDALAPHISSETLQFHHGKHHAGY VAKLNGFIEGTAFAGKTLEEV-IRTSTGAIFNNAAQVWNHTFYFSSMKPP MSGGGgEPTGRLLDEIKKEFTSVENFKDEFSKVAAGHFGSGWAWLVWDKQ GKKVGIEQTHDAGTPITEpMKVPLLCCDVWEHAYYLDRKNDRPAYIKAWW NVVNWDFASKNLENALK------- >gi|82728|pir||S03839_36:235 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - maizegi|168624|gb|AAA33512.1| (M33119) manganese superoxide dismutase (SOD-3) (EC 1.15.1.1) [Zea mays] malrtlaskkvlsfpfggagrplaaaasargvttv--------------- ---TLPDLSYDFGALEPAISGEIMRLHHQKHHATYVANYNKALEQLETAV SKGDASAVVQLQAAIKFNGGGHVNHSIFWKNLKPISEGGGEPPhGKLGWA IDEDFGSFEALVKKMNAEGAAFQGSGWVWLALDKEAKKVSVETTANQDPL VTKGAslVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYEN VLA------- >gi|134672|sp|P11796|SODM_NICPL_14:225 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|82145|pir||S03639 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - curled-leaved tobaccogi|19693|emb|CAA32643.1| (X14482) manganese superoxide dismutase preprotein (AA -24 to 204) [Nicotiana plumbaginifolia] malrtlvsrrtla---TGLGFRQQLRGLQTFSLPDLPYDYGALEPAISGD IMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGH INHSIFWKNLAPVREGGGEPPkGSLGWAIDTNFGSLEALVQKMNAEGAAL QGSGWVWLGVDKELKRLVIETTANQDPLVSKGAnlVPLLGIDVWEHAYYL QYKNVRPDYLKNIWKVMNWKYANEVYEK----------ecp >gi|6685985|sp|Q59094|SODM_ACICA_22:227 SUPEROXIDE DISMUTASE [MN] PRECURSORgi|7433323|pir||JC6320 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - Acinetobacter calcoaceticusgi|1359472|emb|CAA86923.1| (Z46863) superoxide dismutase (Fe/Mn family) [Acinetobacter sp. ADP1] mtrslkttlillassvismsa--------------LAEFKQAPLPYATNA LQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKqisKY NTAVRNNGGGHFNHTFFWESLAATNK-TGQPSPALVKQITQDFGSLDAFK QKFNEAASGRFGSGWAWLIVTP-NGKLAVTSTPNQDNPLMDlsetKGTPL LGLDVWEHAYYLKYQNRRADYIKAFWSVVNWNKVNERYNEAIK------- k >gi|7433346|pir||T04072_33:229 probable superoxide dismutase (EC 1.15.1.1) (Mn) precursor - ricegi|601869|gb|AAA57130.1| (L34038) manganese superoxide dismutase [Oryza sativa] malrtlasrktlaaaalplaaaaaargvttva------------------ -LPDLPYDYGALEPAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKG DAPAIVHLQSAIKFNGGGHVNHSIFWNNLKPISEGGGDPPhAKLGWAIDE DFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTK GAnlVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVIENA-- -------ta >gi|134670|sp|P13367|SODM_MYCLE_1:197 SUPEROXIDE DISMUTASE [MN]gi|80649|pir||S06599 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium lepraegi|581343|emb|CAA34472.1| (X16453) superoxide dismutase (AA 1-207) [Mycobacterium leprae] --------------MAEYTLPDLDWDYAALEPHISGEINEIHHTKHHAAY VKGVNDALAKLDEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLG NKLLTFQLYDQQANVSLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWADVQSRYMAA---------tsktqglifd >gi|134671|sp|P17670|SODF_MYCTU_1:197 SUPEROXIDE DISMUTASE [FE]gi|98822|pir||S15205 superoxide dismutase (EC 1.15.1.1) (Fe) - Mycobacterium tuberculosisgi|809161|pdb|1IDS|A Chain A, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod)gi|809162|pdb|1IDS|B Chain B, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod)gi|809163|pdb|1IDS|C Chain C, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod)gi|809164|pdb|1IDS|D Chain D, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod)gi|581379|emb|CAA37042.1| (X52861) superoxide dismutase [Mycobacterium tuberculosis]gi|1781110|emb|CAB06220.1| (Z83864) sodA [Mycobacterium tuberculosis]gi|3342172|gb|AAC27527.1| (AF077406) superoxide dismutase [Mycobacterium bovis BCG]gi|4321776|gb|AAD15824.1| (AF061030) superoxide dismutase [Mycobacterium tuberculosis] --------------MAEYTLPDLDWDYGALEPHISGQINELHHSKHHATY VKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLG NKLLIFQVYDHQTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV VNWADVQSRYAAA---------tsqtkglifg >gi|6429239|dbj|BAA86881.1|_31:223 (AB028460) manganese superoxide dismutase [Barbula unguiculata] mirlgrhtvpsirgwalppalatatlhter-------------------L PDLDYNYRALEPYFNAHIMQLHHQKHHQTYVTNYNKALEQLQVCNDDPNV V--VSLQSAINFNGGGHINHSIFWKNLAPTSEGGGSPPqGSLAKAIDAQF GGLDKLTAKMSTAGAGVQGSGWVWLGYNKELKRLQVETTQNQDPLSSKGL IPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVVNWKDVAKRYESA------ --- >gi|2117681|pir||JC4396_1:200 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Propionibacterium freudenreichii subsp. shermanii --------------MAVYTLPELPYDYSALEPYISGEIMELHHDKHHKAY VDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAPK GSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLG KRINTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNV VNWDDVALRFSEAR--------va >gi|1174390|sp|P41979|SODO_MAIZE_35:233 SUPEROXIDE DISMUTASE [MN] 3.3, MITOCHONDRIAL PRECURSORgi|539067|pir||A48684 superoxide dismutase (EC 1.15.1.1) (Mn) 3.3 precursor - maizegi|7548001|gb|AAA72021.2| (L19462) Mn-superoxide dismutase [Zea mays] malrtlasknalsfalggaarpsaesargvttva---------------- ---LPDLSYDFGALEPVISGEIMRLHHQKNHATYVVNYNKALEQIDDVVV KGDDSAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPhGKLGWAI DEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLV TKGAslVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYENV LA------- >gi|464776|sp|P80293|SODM_PROFR_2:199 SUPEROXIDE DISMUTASE [MN-FE]gi|632261|pir||S41106 superoxide dismutase - Propionibacterium shermaniigi|5542133|pdb|1BSM|A Chain A, P.Shermanii Sod(Fe+3) 140k Ph8gi|5542134|pdb|1BSM|B Chain B, P.Shermanii Sod(Fe+3) 140k Ph8gi|2981720|pdb|1AVM|A Chain A, The Cambialistic Superoxide Dismutase (Fe-Sod) Of P. Shermanii Coordinated By Azidegi|2981721|pdb|1AVM|B Chain B, The Cambialistic Superoxide Dismutase (Fe-Sod) Of P. Shermanii Coordinated By Azidegi|5542131|pdb|1BS3|A Chain A, P.Shermanii Sod(Fe+3) Fluoridegi|5542132|pdb|1BS3|B Chain B, P.Shermanii Sod(Fe+3) Fluoridegi|2624608|pdb|1AR5|A Chain A, X-Ray Structure Of The Cambialistic Superoxide Dismutase From Propionibacterium Shermanii Active With Fe Or Mngi|2624609|pdb|1AR5|B Chain B, X-Ray Structure Of The Cambialistic Superoxide Dismutase From Propionibacterium Shermanii Active With Fe Or Mngi|5542136|pdb|1BT8|A Chain A, P.Shermanii Sod(Fe+3) Ph 10.0gi|5542137|pdb|1BT8|B Ch! ain B, P.Shermanii Sod(Fe+3) Ph 10.0gi|2624606|pdb|1AR4|A Chain A, X-Ray Structure Analysis Of The Cambialistic Superoxide Dismutase From Propionibacterium Shermanii Active With Fe Or Mngi|2624607|pdb|1AR4|B Chain B, X-Ray Structure Analysis Of The Cambialistic Superoxide Dismutase From Propionibacterium Shermanii Active With Fe Or Mngi|740970|prf||2006248A Cu superoxide dismutase [Propionibacterium freudenreichii shermanii] a----------------VYTLPELPYDYSALEPYISGEIMELHHDKHHKA YVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAP KGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPL GKRINTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWN VVNWDDVALRFSEAR--------va >gi|279456|pir||DSPMN_34:237 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - garden peagi|20902|emb|CAA42737.1| (X60170) superoxide dismutase [Pisum sativum] maartllcrktlssvlrndakpigaaiaaastq-----------SRGLHV FTLPDLAYDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLHDAVAK ADTSTTVKLQNAIKFNGGGHINHSIFWKNLAPVSEGGGEPPKEsLGWAID TNFGSLEALIQKINAEGAALQASGWVWLGLDKDLKRLVVETTANQDPLVT KGAslVPLLWIDVWEHAYYLQYKNVRPDYLKNIWKVINWKHASEVYEK-- --------ess >gi|1711458|sp|P53655|SODM_YEREN_3:207 SUPEROXIDE DISMUTASE [MN]gi|1237254|emb|CAA65596.1| (X96852) sodA [Yersinia enterocolitica] ms-----------------YSLPSLPYAYDALEPHFDKQTMEIHHTKHHQ TYVNNANTVLESFPELAKFSVEDLIKdldkvpaEKRTFMRNNAGGHANHS LFWKGLK----LGTTLTGDLKAAIERDFGSVDSFKEKFEAAAATRFGSGW AWLVLKD-DGKLAVVSTANQDSPLMGEAvsgasgFPIVGLDVWEHAYYLK FQNRRPDYIKAFWNVVNWDEAAARFAQAK-------- >gi|6094319|sp|Q60036|SODF_METTM_6:199 SUPEROXIDE DISMUTASE [FE]gi|1076135|pir||S51097 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Methanobacterium thermoautotrophicum (strain Marburg)gi|620125|emb|CAA52323.1| (X74264) superoxide dismutase [Methanobacterium thermoautotrophicum] mekkf-----------------YELPELPYPYDALEPYISEEQLRIHHEK HHQAYVDGANGVLRKLDDARENGEEVDIKAALKELSFHVGGYVLHLFFWG NMGPADECGGEPDGRLAEYIEKDFGSFQRFKKEFSQAAVSAEGSGWAVLT YCQRTDRLFIMQVEKHNVNVIPHFRILMVLDVWEHAYYIDYRNVRPDYVE AFWNIVNWKEVEKRFD-----------dlf >gi|227056|prf||1613421A_3:202 superoxide dismutase [Synechococcus PCC6301] ms-----------------YELPALPFDYTALAPYITKETKEFHHDKHHA AYVNNYNNAVKDTDLDGQPIEAVIKAiagdASKAGLFNNAAQAWNHSFYW NSIKPN--GGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWL VLID-NGTLKIKTTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYI STFVEkLANWDFASANYAAAIA------- >gi|6840824|gb|AAF28773.1|AF077224_1_9:242 (AF077224) iron-superoxide dismutase precursor [Vigna unguiculata] maslglqnVAGINLLFKEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFH WGKHHRTYVENLKKQVVGTELDGKSLEEIIVTaynkGDILPAFNNAAQVW NHDFFWECMKPG--GGGKPSGELLELIERDFGSFEKFLDEFKAAAATQFG SGWAWLAYKAskldgenaanppsadEDNKLVVIKSPNAVNPLVWgGYYPL LTIDVWEHAYYLDFQNRRPDYISVFMDkLVSWDAVSSRLEQAKA------ -lsa >gi|3334336|sp|Q42684|SODM_CHLRE_5:218 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|7433341|pir||T08047 superoxide dismutase (EC 1.15.1.1) (Mn) - Chlamydomonas reinhardtiigi|973176|gb|AAA80639.1| (U24500) Mn superoxide dismutase [Chlamydomonas reinhardtii] maqa-------------------LPPLPYDYGSLEPHVDATTMNIHHTKH HQTYVNNLNAALDKFPELKDLGLVDLNKavgtdklpkDVATVIRNNGGGH YNHSFFWKVMTNPS-NTNGPNGDVKAAIEASFGSVDEMKAKFNAAAAGRF GSGWAWLSVKP-DGSLSIDSTPNQDNPLMTALpdvaggIPLLGLDVWEHA YYLKYQNRRPEYIAAWWNVVNWEQVAENYKAAQAGTVPL-- >gi|1399534|gb|AAB03279.1|_1:204 (U51441) manganese superoxide dismutase [Actinobacillus pleuropneumoniae] ---------------MAYQLPELGYAYDALEPHFDKATMEIHHTKHHQTY VNNANAALEAHPELLEKCPGALIKdlsqvpaEKRTAVRNNVGGHVNHTLF WKGLK----TGTTLQGALKDAIVRDFGSVEAFQAEFEKAAATRFGSGWAW LVVE--GGKLAVVSTANQDNPIMGKEvagvsgFPILALDVWEHAYYLHYQ NRRPDYIKAFWNVVNWDEAARRFEE----------hashcgcak >gi|1711435|sp|P50061|SODF_PLEBO_1:199 SUPEROXIDE DISMUTASE [FE]gi|608558|gb|AAA69954.1| (U17612) superoxide dismutase [Plectonema boryanum] ---------------MAFTQPPLPFPKDALEPyGMKAETFDYHYGKHHAA YVTNLNKLVEGTPMESLSLEDVIKQsfgdSSKVGVFNNAAQVWNHTFFWN CLKAG--GGGAPTGELAAKIDAAFGSLDKFKEEFSNAAATQFGSGWAWLV DD--GGTLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIK NFLDnLVNWDFVAQNLAA---------- >gi|7433324|pir||H71531_6:205 superoxide dismutase (EC 1.15.1.1) (Mn) - Chlamydia trachomatis (serotype D, strain UW3/Cx)gi|3328709|gb|AAC67887.1| (AE001302) Superoxide Dismutase (Mn) [Chlamydia trachomatis] mvfss-----------------YMLPALPYDYDALEPVISAEIMQLHHQK HHQGYINNLNEALKSLDVANATQDLARLIAINPALRFNGGSHINHSLFWE MLAPQGKGGGVPPRHeLLKLIEKFWGSFDNFLKNFITSSAAVQGSGWGWL AFCPQKQELMVQTTANQDPLEATtGMIPLLGVDVWEHAYYLQYKNARMDY LKSFPSIINWDYIENRFVEMSK-------q >gi|2500830|sp|Q59679|SODM_PASHA_1:204 SUPEROXIDE DISMUTASE [MN]gi|1161158|gb|AAA85362.1| (L47537) superoxide dismutase [Pasteurella haemolytica serotype 1] ---------------MAYTLPELGYAYDALEPHFDAKTMEIHHSKHHQAY INNANAALEAHPELLEKCPGALIKdlsqvpaEKRIAVRNNVGGHVNHTLF WKGLK----TGTTLQGALKEAIERDFGSVEAFQSEFEKAATTRVGSGWAW LVLE--EGKLAVVSTANQDNPLMGKEvagvsgYPILVLDVWEHAYYLNYQ NRRPDFIKAFWNVVNWDEAARRFEE----------kvatcgcak >gi|464774|sp|P34107|SODF_ENTHI_3:190 SUPEROXIDE DISMUTASE [FE]gi|323073|pir||A45552 superoxide dismutase (EC 1.15.1.1) (Fe) - Entamoeba histolyticagi|312772|emb|CAA50204.1| (X70852) superoxide dismutase [Entamoeba histolytica] ms-----------------FQLPQLPYAYNALEPHISKETLEFHHDKHHA TYVNKLNGLVKGTEQEHKTLEELIKQKPTQAIYNNAAQAWNHAFYWKCMC GC---GVKPSEQLIAKLTAAFGGLEEFKKKFTEKAVGHFGSGWCWLVEH- -DGKLEIIDTHDAVNPMTNGMKPLLTCDVWEHAYYIDTRNNRAAYLEHWW NVVNWKFVEEQL------------ >gi|6572119|emb|CAA71559.2|_14:224 (Y10531) superoxide dismutase [Clostridium perfringens] mknnflkhkkspl--MYPDYCGSSSTKGEGFKLKPLDYPYDALEPSIDAE TVKIHHDKHQQAYVDKLNKALEKHPELYGKSLYDILSnlddmpeDIMADL VNQGGGVYNHEFYWSILGKG---CNRPVAEIADAIDRDFGSFEEFKEKFK QCGISTFGSGWAWLVSDK-DGKLEIMSTKDQSSPISLGLIPILTMDVWEH AYYLKYQNRRPEYIDYFFDIINWKKCEEYY------------nnr >gi|3114705|gb|AAC15842.1|_11:209 (AF061583) superoxide dismutase [Raphanus sativus] maasaavtan-----------------YVLKPPPYPLDALEPHMSKQTLE FHWGKHHRAYVDNLKKQVLGSELEGKALEHIIQNtynnGDLLPPFNNAAQ AWNHEFFWESMKPG--GGGKPSGELLALLERDFTSYEKFYDEFNAAAATQ FGAGWAWLAYA--DNKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDF QNRRPDYIKTFMNnLVSWEAVSSRLEAAKA-------asa >gi|6094321|sp|O30826|SODM_HAEDU_1:204 SUPEROXIDE DISMUTASE [MN]gi|7433322|pir||JC6542 superoxide dismutase (EC 1.15.1.1) (Mn) - Haemophilus ducreyigi|2407235|gb|AAC46219.1| (AF017750) manganese superoxide dismutase [Haemophilus ducreyi] ---------------MTYQLPELGYAYDALEPYFDKETMEIHHSKHHQAY VNNSNALLEKHPELLEKCPGALLKdltqvpaEKRTAVRNNLGGHVNHTLF WKGLK----TGTTLQGALKDAIIRDFGSVKAFQAEFEQAAATRFGSGWAW LVLE--EGKLAVVSTANQDSPIMGKDvagvsgYPIFTLDVWEHAYYLHYQ NRRPDYIKAFWNVVNWDEASRRFEE----------kqagcgctk >gi|1174387|sp|P43019|SODM_SALTY_3:202 SUPEROXIDE DISMUTASE [MN]gi|808038|gb|AAC43331.1| (U20645) Mn-superoxide dismutase [Salmonella typhimurium] ms-----------------YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQ TYVNNANAALENLPEFASLPVEELITkldqvpaDKKTVLRNNAGGHANHS LFWKGLK----TGTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGW AWLVLK--GDKLAVVSTANQDSPLMGEAisgasgFPILGLDVWEHAYYLK FQNRRPDYIKEFWNVVNWDEAAARF------------alk >gi|3676839|gb|AAC62115.1|_25:224 (AF092524) manganese superoxide dismutase [Triticum aestivum] malrtlaakktlglalggargvat-----------------FTLPDLPYD YGALEPAVSGEIMRLHHQKHHATYVAHYNKALEQLDAAVSKGDASAVVHL QSAIKFNGGGHVNHSIFWKNLKPISEGGGeAPHGKLGWAIDEDFGSIEKL IKKMNAEGA-LQGSGWVWLALDKEAKGLSVETTPNQDPLVTKgsNLHPLL GIDVWEHAYYLQYKNVRPDYLTNIWKVVNWKYAGEEYEKVLA------- >gi|8918742|dbj|BAA97805.1|_3:201 (AB041845) manganese superoxide dismutase [Vibrio parahaemolyticus] ms-----------------HTFPALPYPYDALEPYIDAKTMEVHYSKHHK TYFDKFVTAVQGSVLETQSLDEIFAAisQHSPAIRNNGGGYYNHILYWNC MSPE--GGGEPQGALAQAINDKFGHFEKFKDEFAQAAVNTFGSGFAWLVV K--DGDIHITSTSNQDNPLMDVAdvrgEPILALDVWEHAYYISYQNRRPE YIDAWWNVVNWRAVEENYARAL--------v >gi|6523771|emb|CAB62411.1|_27:215 (AL133357) probable superoxide dismutase [mn] precursor [Schizosaccharomyces pombe]gi|6606078|gb|AAF19051.1|AF069292_1 (AF069292) manganese superoxide dismutase [Schizosaccharomyces pombe] mlrflsknsvaairnvsiargvhtka------------------TLPPLP YAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKLADPNLDLEGE--V ALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPvtSGSLHKAITSKWGSL EDFQKEMNAALASIQGSGWAWLIVDK-DGSLRITTTANQDT--IVKSKPI IGIDAWEHAYYPQYENRKAEYFKAIWNVINWKEAESRY------------ snr >gi|134646|sp|P28759|SODF_SOYBN_10:243 SUPEROXIDE DISMUTASE [FE], CHLOROPLAST PRECURSORgi|7433325|pir||JW0085 superoxide dismutase (EC 1.15.1.1) (Fe) - soybeangi|169955|gb|AAA33960.1| (M64267) Fe-superoxide dismutase [Glycine max]gi|228415|prf||1803527A Fe superoxide dismutase [Glycine max] maslgglqnVSGINFLIKEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEF HWGKHHKTYVENLKKQVVGTELDGKSLEEIIVTsynkGDILPAFNNAAQV WNHDFFWECMKPG--GGGKPSGELLELIERDFGSFVKFLDEFKAAAATQF GSGWAWLAYRArkfdgenvanppspdEDNKLVVLKSPNAVNPLVWgGYYP LLTIDVWEHAYYLDFQNRRPDYISVFMDkLVSWDAVSSRLEQAKA----- --litsa >gi|1061202|emb|CAA62838.1|_1:189 (X91650) superoxide dismutase [Propionibacterium freudenreichii]gi|3135856|emb|CAA70215.1| (Y09012) superoxide dismutase [Propionibacterium freudenreichii] --------------MAVYTLPELPYDYSALEPYISGEIMELHHDKHHKAY VDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAPK GSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLG KRINTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNV VNW------------------- >gi|1066332|gb|AAB39949.1|_1:195 (U39401) Fe-superoxide dismutase [Trypanosoma cruzi] ---------------MVFSIPPLPWGYDGLAAkGLSKQQVTLHYDKHHQG YVTKLNAAAQTNSALATKSIEEIIRTEKGPIFNLAAQIFNHTFYWESMCP N--GGGEPTGKVADEINASFGSFAKFKEEFTNVAVGHFGSGLAWLVKDTN SGKLKVYQTHDAGCPLTEpNLKPLLTCDVWEHAYYVDYKNDRAAYVQTFW NVVNWKNVERQL------------ >gi|533307|dbj|BAA02902.1|_1:193 (D13756) superoxide dismutase [Bacteroides fragilis] ---------------MTYEMPKLPYANNALEPVISQQTIDYHYGKHLQTY VNNLNSLVPGTEYEGKTVEAIVASAPDGAIFNNAGQVLNHTLYFLQFAPK P-AKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSVDK-D GKLHITKEPNGSNPVRAGLKPLLGFDVWEHAYYLDYQNLRADHVNKLWEI IDWDVVEKRL------------ >gi|1351082|sp|P21276|SODF_ARATH_25:223 SUPEROXIDE DISMUTASE [FE], CHLOROPLAST PRECURSORgi|166700|gb|AAA32791.1| (M55910) Fe-superoxide dismutase [Arabidopsis thaliana] slhsslklelqlqrmaassavtan-----------------YVLKPPPFA LDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEHIIHSty nnGDLLPAFNNAAQAWNHEFFWESMKPG--GGGKPSGELLALLERDFTSY EKFYEEFNAAAATQFGAGWAWLAYS--NEKLKVVKTPNAVNPLVLGSFPL LTIDVWEHAYYLDFQNRRPDYIKTFMTnLVSWEAVSARLEAAKA------ -asa >gi|7433338|pir||T05531_33:231 superoxide dismutase (EC 1.15.1.1) (Fe) - Arabidopsis thaliana (fragment)gi|4455253|emb|CAB36752.1| (AL035523) superoxide dismutase (EC 1.15.1.1) (Fe)(fragment) [Arabidopsis thaliana]gi|7269360|emb|CAB79419.1| (AL161562) superoxide dismutase (EC 1.15.1.1) (Fe)(fragment) [Arabidopsis thaliana] rfhwrvlsslhsslklelqlqrmaassavtan-----------------Y VLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPL EHIIHStynnGDLLPAFNNAAQAWNHEFFWESMKPG--GGGKPSGELLAL LERDFTSYEKFYEEFNAAAATQFGAGWAWLAYS--NEKLKVVKTPNAVNP LVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTnLVSWEAVSARLEAA KA-------asa >gi|8918744|dbj|BAA97806.1|_1:201 (AB041846) manganese superoxide dismutase [Vibrio mimicus] ---------------MPHLFPDLPYAYDALEPYIDAKTMEVHYSKHHRTY YDKFLSAIKGTDYQDQSLSEIFARvsTLPAAVRNHGGGYYNHILYWNCMK PN--GGGEPQGELAAAIERHFGSFAQFKEAFSQAAVNTFGSGFVWLIVQ- -EGQLSISSTSNQDNPLMDVVavrgEPILALDVWEHAYYIRYQNRRPEYI DAWWSVVNWEAVSENYAIAL--------tqaa >gi|7245492|pdb|1D5N|A_2:203 Chain A, Crystal Structure Of E. Coli Mnsod At 100kgi|7245493|pdb|1D5N|B Chain B, Crystal Structure Of E. Coli Mnsod At 100kgi|7245494|pdb|1D5N|C Chain C, Crystal Structure Of E. Coli Mnsod At 100kgi|7245495|pdb|1D5N|D Chain D, Crystal Structure Of E. Coli Mnsod At 100kgi|3212626|pdb|1VEW|A Chain A, Manganese Superoxide Dismutase From Escherichia Coligi|3212627|pdb|1VEW|B Chain B, Manganese Superoxide Dismutase From Escherichia Coligi|3212628|pdb|1VEW|C Chain C, Manganese Superoxide Dismutase From Escherichia Coligi|3212629|pdb|1VEW|D Chain D, Manganese Superoxide Dismutase From Escherichia Coligi|3660240|pdb|1MMM|A Chain A, Distinct Metal Environment In Iron-Substituted Manganese Superoxide Dismutase Provides A Structural Basis Of Metal Specificitygi|3660241|pdb|1MMM|B Chain B, Distinct Metal Environment In Iron-Substituted Manganese Superoxide Dismutase Provides A Structural Basis Of Metal Specificity s-----------------YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQT YVNNANAALESLPEFANLPVEELITkldqlpaDKKTVLRNNAGGHANHSL FWKGLK----KGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWA WLVLK--GDKLAVVSTANQDSPLMGEAisgasgFPIMGLDVWEHAYYLKF QNRRPDYIKEFWNVVNWDEAAARFAA----------kk >gi|134659|sp|P00448|SODM_ECOLI_3:204 SUPEROXIDE DISMUTASE [MN]gi|1070455|pir||DSECN superoxide dismutase (EC 1.15.1.1) (Mn) - Escherichia coligi|42973|emb|CAA27580.1| (X03951) Mn-SOD (aa 1-206) [Escherichia coli]gi|305012|gb|AAB03041.1| (L19201) manganese superoxide dismutase [Escherichia coli]gi|1790342|gb|AAC76890.1| (AE000465) superoxide dismutase, manganese [Escherichia coli] ms-----------------YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQ TYVNNANAALESLPEFANLPVEELITkldqlpaDKKTVLRNNAGGHANHS LFWKGLK----KGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGW AWLVLK--GDKLAVVSTANQDSPLMGEAisgasgFPIMGLDVWEHAYYLK FQNRRPDYIKEFWNVVNWDEAAARFAA----------kk >gi|1711432|sp|P53638|SODF_BACFR_1:193 SUPEROXIDE DISMUTASE [FE]gi|143945|gb|AAA22910.1| (M96560) Fe-superoxide dismutase [Bacteroides fragilis] ---------------MTYEMPKLPYANNALEPVISQQTIDYHYGKHLQTY VNNLNSLVPGTEYEGKTVEAIVASAPDGAIFNNAGQVLNHTLYFLQFAPK P-AKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSVDK-D GKLHITKEPNGSNPVRAGLKPLLGFDVWEHAYYLDYQNRRADDVNKLWEI IDWDVVEKRL------------ >gi|8918746|dbj|BAA97807.1|_3:201 (AB041847) manganese superoxide dismutase [Vibrio vulnificus] ms-----------------HTFPELPYSYDALEPYIDAKTMEVHYSKHHK TYYDKFLAAIQGSELEHQTLTEIFSSisQHSPAVRNNGGGYYNHILYWQC MSPN--GGGQPQGALAHAIQEKFGTFAAFKEAFSQAAVNTFGSGFAWLVV K--EGDIHITSTSNQDNPLMDIAsvrgEPILALDVWEHAYYIRYQNRRPE YIDAWWNVVDWQVVEQNYAQAI--------g >gi|7484734|pir||T09799_8:195 superoxide dismutase (EC 1.15.1.1) (Mn) - upland cotton (fragment)gi|3219353|gb|AAC78469.1| (AF061514) manganese superoxide dismutase [Gossypium hirsutum] raaarag---------------------------GALEPAISGEIMQLHH QKHHQTYITNYNKALEQLHEAIQKGDSSTVVKLQSAIKFNGGGHVNHSIF WKNLAPIREGGGEPPKAsLGWAIDTHFGSLESLIQKMNAEGAALQGSGWV WLGVNKELKKLVIETTPNQDPLVTKGPhlVPLLGIDVWEHAYYLQYKNVR PDYLKNIWKVINWKYASEVYEK----------eca >gi|99759|pir||B39267_25:223 superoxide dismutase (EC 1.15.1.1) (Fe) - Arabidopsis thaliana (fragment) slhsslklelqlqrmaassavtan-----------------YVLKPPPFA LDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEHIIHSty nnGDLLPAFNNAAQAWNHEFFWESMKPG--GGGKPSGELLALLERDFTSY EKFYEEFNAAAATQFGAGWAWLAYS--NEKLKVVKTPNAVNPLVLGSFPL LTIDVWEHAYYLDFQNRXPDYIKTFMTnLVSWEAVSARLEAAKA------ -asa >gi|630796|pir||S48832_17:222 superoxide dismutase (EC 1.15.1.1) (Mn) - nematode (Onchocerca volvulus)gi|1085008|pir||S55346 superoxide dismutase (EC 1.15.1.1) (Mn) - nematode (Onchocerca volvulus)gi|562770|emb|CAA57657.1| (X82171) superoxide dismutase [Onchocerca volvulus] mnliigiagrllvgkn--------YCLNTQRLKHVLPDLPYDYGALEPIL SAEIMQVHHGKHHAAYVNALNQAEEKVKEALAKGDTQAAVAGTKLMNFNT GGHINHTLFWEGLTAVK-NSGEPNSELMTAIKKDFGSLETMIDKLNAKTI AIQGSGWGWLAYDKEMKRLQLACCPNQDLLEPTtGLIPLFCIDVWEHAYY LQYKNLRPDFVKAIWKIANWKIISDRYIKAR--------g >gi|1174385|sp|P41981|SODM_ONCVO_17:222 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|630794|pir||S48831 superoxide dismutase (EC 1.15.1.1) (Mn) - nematode (Onchocerca volvulus)gi|562768|emb|CAA57658.1| (X82172) manganese superoxide dismutase [Onchocerca volvulus] mnliigvagrllvgkn--------YCLNTQRLKHVLPDLPYDYGALEPIL SAEIMQVHHGKHHAAYVNALNQAEEKVKEALAKGDTQAAVAGTKLMNFNT GGHINHTLFWEGLTAVK-NSGEPNSELMTAIKKDFGSLETMIDKLNAKTI AIQGSGWGWLAYDKEMKRLQLACCPNQDLLEPTtGLIPLFCIDVWEHAYY LQYKNLRPDFVKAIWKIANWKIISDRYIKAR--------g >gi|1515346|gb|AAB17024.1|_2:184 (U43776) superoxide dismutase [Streptococcus pyogenes] q---------------------------------FDAETMTLHHDKHHAT YVANTNAALEKHPEIGENLEELLADvtkipeDIRQALINNGGGHLNHALF WELLSPE---KQDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAW LVVNK-EGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNY IKAFFEIINWKKVLELYQAAK-------- >gi|3719455|gb|AAC63378.1|_47:261 (AF094831) iron superoxide dismutase [Zantedeschia aethiopica] maglavlpstsalplpfpgcsrragslrriapkvgrsgpltivaql---- --------------ELKPPPYSLNALEPYMSQETLEFHWGKHHRGYVDGL NRQILGTELAGLSLEEIVIKsyneGDLLPTFNNAAQIWNHDFFWQSMKPD --GGGKPFGVLMELIERDFGSFEGMMAQFKNAALTQFGSGWAWLVYKAnr ldvgnavnpcpteKDYKLIIEKTPNAVNPLIWDYNPILVVDVWEHAYYLD YQNRRPDFVSTFMDkLISWEAASARLEAAMA-------qaaeaqaaerar eeeerrkeeeedeetrddggdmkmyvdsdddglede >gi|4731567|gb|AAD28503.1|AF118809_1_34:235 (AF118809) manganese superoxide dismutase precursor [Neurospora crassa] mvnlgsiwqnllasqaplqsmtgnattmaglat----------------- YSLPQLPYAYNALEPYISAQIMELHHSKHHQTYVTNLNNALKVHVAAIAS SDIPAQIAQQPAIKFNGGGHINHSLFWKNLAPAETPETNYSKAapsLAAE IEKTWGSFDEFKKAFSAALLGIQGSGWGWLVKEStaEKGRLRIITTKDQD -PVVGGEVPVFGVDMWEHAYYLQYLNGKAAYVENIWKVINWKTAEERFQG SRE-------dafadlkall >gi|7433340|pir||T09788_29:224 probable superoxide dismutase (EC 1.15.1.1) (Mn) - papayagi|1369765|gb|AAB02052.1| (L77078) manganese superoxide dismutase [Carica papaya] malrnlatrktlsatgkrsgstcrlada------------------TLPD LPYDY-APWSAISGEIMQLHHQKHHQAYVTNYNKALEQLHEAISKGDASA AVKLQSAIKFNGGGHINHSIFWKNLAPTREGGGEPPKSsLGWEIDNHFGS LDALIQKMSAEGAAVQGSGWVWLGLDKELKHLVVETTPNQDPLVTKnpNK VPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVVNWKYACEVYQQ------- ---ftplpasrd >gi|7677029|gb|AAF66995.1|AF062654_1_13:222 (AF062654) manganese superoxide dismutase [Aspergillus nidulans] maslirtslrtgLRASSSSAAPLTFTRGKATLPDLAYDYGALEPAISGKI MELHHKNHHQTYVNSYNTAIEQLQEAQASNNIAAQIALKPLINFHGGGHI NHTLFWENLAPKNAGGGEPPsGALSKAINESFGSLENFQGQMNTALAAIQ GSGWAWLVQDKQTGSIAIKTYANQD-PVVGQFKPLLGIDAWEHAYYLQYQ NRKAEYFKAIWEVINWKAVEKRF------------a >gi|134644|sp|P19665|SODF_PORGI_1:191 SUPEROXIDE DISMUTASE [MN-FE]gi|79392|pir||JQ0457 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Porphyromonas gingivalisgi|9257063|pdb|1QNN|A Chain A, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalisgi|9257064|pdb|1QNN|B Chain B, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalisgi|9257065|pdb|1QNN|C Chain C, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalisgi|9257066|pdb|1QNN|D Chain D, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalisgi|216380|dbj|BAA14182.1| (D90152) superoxide dismutase [Porphyromonas gingivalis] ---------------MTHELISLPYAVDALAPVISKETVEFHHGKHLKTY VDNLNKLIIGTEFENADLNTI-VQKSEGGIFNNAGQTLNHNLYFTQFRPG --KGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDA-N GKLSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLWSI VDWDIVESRY------------ >gi|9657290|gb|AAF95835.1|_18:218 (AE004335) superoxide dismutase, Mn [Vibrio cholerae] mlsalliakrysskedt---------------MPHLFPDLPYAYDALEPY IDTKTMEVHYSKHHRTYYDKFLSAIKGTEHEDRPLSEIFARvsTLPAAVR NHGGGYYNHIVYWNCMKPN--AGGEPQGELAAEIERQFGSFAQFKEAFSQ AAVNTFGSGFVWLIVQ--QGQLSITSTSNQDNPLMDVVavrgEPILALDV WEHAYYIRYQNRRPEYIDAWWNVVNWEAVSENYAIAL--------tqaa >gi|7572933|emb|CAB87434.1|_37:233 (AL163763) manganese superoxide dismutase-like protein [Arabidopsis thaliana] mtttviiiifvaifattlhdargatmepclesmkta-------------- ----SLPDLPYAYDALEPAISEEIMRLHHQKHHQTYVTQYNKALNSLRSA MADGDHSSVVKLQSLIKFNGGGHVNHAIFWKNLAPVHEGGGKPPHDpLAS AIDAHFGSLEGLIQKMNAEGAAVQGSGWVWFGLDRELKRLVVETTANQDP LVTKGShlVPLIGIDVWEHAYYPQYKNARAEYLKNIWTVINWKYAADVFE K----------htrdldin >gi|112660|pir||S12882_1:191 superoxide dismutase (EC 1.15.1.1) - Porphyromonas gingivalisgi|227251|prf||1617125A Fe superoxide dismutase [Porphyromonas gingivalis] ---------------MTHELISLPYAVDALAPVISKETVEFHHEKHLKTY VDNLNKLIIGTEFENADLNTI-VQKSEGGIFNNAGQTLNHNLYFTQFRPG --KGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDA-N GKLSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLWSI VDWDIVESRY------------ >gi|6693856|gb|AAF25009.1|AF177945_1_1:200 (AF177945) superoxide dismutase [Nostoc commune] ---------------MAFVQDPLPFDINALDPyGMKAETFEYHYGKHHKA YVDNLNKLTEGTELANKSLEEVIKTsfndSSKAGIFNNAAQVWNHTFFWN SLKPA--GGGAPTGDLAARIDKDFGSFDKFKEEFSNAAATQFGSGWSWLI DD--GGTLKVIKTPNAENPLAHGKKALLTLDVWEHAYYIDFRNARPAFIK NFLDnLVNWDFAAENLAKA--------- >gi|2500828|sp|Q92429|SODM_GANMI_1:200 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|1519036|gb|AAB07360.1| (U56403) manganese-superoxide dismutase [Ganoderma microsporum] ---------------MAHVLPDLPYAYNALEPFISQQIMELHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAladgpLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLG LNPATKRLEITTTANQDP--LLSHVPIIGVDIWEHAFYLQYLNVKADYLA AIWIVINFKEAERRLIEATK------- >gi|9789808|sp|Q9ZKE6|SODF_HELPJ_1:195 SUPEROXIDE DISMUTASE [FE]gi|7433343|pir||E71861 superoxide dismutase (EC 1.15.1.1) (Fe) - Helicobacter pylori (strain J99)gi|4155578|gb|AAD06571.1| (AE001528) iron-dependent superoxide dismutase [Helicobacter pylori J99] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTY VNNLNNLIKGTDFEKSSLFAI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH VNWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|7388259|sp|Q9XD74|SODF_RHIME_1:200 SUPEROXIDE DISMUTASE [MN]gi|5163197|gb|AAD40579.1| (AF110770) superoxide dismutase [Sinorhizobium meliloti] ---------------MAFELPNLPYDYDALAPYMSRETLEYHHDKHHLAY VTNGNKLAEEAGLSDLSLEDIVKKsyGTNQPLFNNAGQHYNHVHFWKWMK KGG-GGTSLPGKLDAAIKSDLGGYDKFRADFSAAGAGQFGSGWAWLSVK- -NGKLEISKTPNGENPLVHGATPILGVDVWEHSYYIDYRNARPKYLEAFV DnLINWDYVLELYEAAAK------- >gi|6647851|sp|O93724|SODF_PYRAE_15:211 SUPEROXIDE DISMUTASE [FE] mvttkdthyprsrt-------------------------AYNALEPYISA EIMQLHHQKHHQGYVNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNG HILHSIFWPNMAPPGKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNV EGVGWAILVYEPLEEQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQY KNDRGSYVDNWWNVVNWDDVERRLQKALNGQIALKL >gi|743362|prf||2012263A_1:195 Fe superoxide dismutase [Leishmania donovani chagasi] ---------------MVFSIPPLPWGYDGLAAkGLSKQQVTLHYDKHHQG YVTKLNAAAQTNSALATKSIEEIIRTEKGPIFNLAAQIFNHTFYWESMCP N--GGGEPTGKLADEINASFGSFAKFKEEFTNVAVGHFGSGLAWLVKDTN SGKLKVYDTHDAGCPLTEpNLKPLLTCDVWEHAYYVDYKNDLAGYVQAFL NVVNWKNVERQL------------ >gi|7433344|pir||B72124_6:204 superoxide dismutase (mn) - Chlamydia pneumoniae (strain CWL029)gi|4376313|gb|AAD18210.1| (AE001591) Superoxide Dismutase (Mn) [Chlamydophila pneumoniae]gi|7189632|gb|AAF38524.1| (AE002230) superoxide dismutase [Chlamydophila pneumoniae AR39]gi|8978431|dbj|BAA98268.1| (AP002545) superoxide dismutase (Mn) [Chlamydophila pneumoniae] msfvp-----------------YSLPELPYDYDALEPVISSEIMILHHQK HHQIYINNLNAALKRLDAAETQQNLNELIALEPALRFNGGGHINHSLFWE TLAPIDQGGGQPPKHeLLSLIERFWGTMDNFLKKLIEVAAGVQGSGWAWL GFCPAKQELVLQATANQDPLEPLtGKLPLLGVDVWEHAYYLQYKNVRMDY LKAFPQIINWGHIENRFSEII--------ssk >gi|2384558|gb|AAB69755.1|_1:197 (U70130) iron-dependent superoxide dismutase [Babesia bovis] ---------------MAFKLPALPYGMRELIPHISEETLSFHYGKHHAGY VNKLNSLIKGTPMESCTIEEL-ILGQTGAVFNNAAQIWNHTFYWNSMGPN --CGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLKD-D GTADIVQTHDAGSPLKENLgRPLLCCDVWEHAYYIDYKNDRLSYINSWWN LVNWDFANKNLEAPFK-------ws >gi|6094318|sp|O15905|SODF_BABBO_1:197 SUPEROXIDE DISMUTASE [FE]gi|2384560|gb|AAB69756.1| (U70131) iron-dependent superoxide dismutase [Babesia bovis] ---------------MAFKLPALPYGMRELIPHISEETLSFHYGKHHAGY VNKLNSLIKGTPLESCTIEEL-ILGQTGAVFNNAAQIWNHTFYWNSMGPN --CGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLKD-D GTADIVQTHDAGSPLKENLgRPLLCCDVWEHAYYIDYKNDRLSYINSWWN LVNWDFANKNLEAPFK-------ws >gi|7433331|pir||E64568_1:195 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Helicobacter pylori (strain 26695)gi|2313490|gb|AAD07454.1| (AE000555) superoxide dismutase (sodB) [Helicobacter pylori 26695] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTY VNNLNNLIKGTDFEKSSLFDI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKGALEKDFGSLEQFKEDFIKSATTLFGSGWNWVAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYEH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|1174379|sp|P43312|SODF_HELPY_1:195 SUPEROXIDE DISMUTASE [FE]gi|508714|gb|AAC36885.1| (L24801) superoxide dismutase [Helicobacter pylori]gi|4218193|emb|CAA10728.1| (AJ132687) iron superoxide dismutase [Helicobacter pylori] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTY VNNLNNLIKGTDFEKSSLFDI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|406218|emb|CAA51195.1|_1:195 (X72618) superoxide dismutase [Helicobacter pylori] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTY VNNLNNLIKGTDFEKSSLFDI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKGALEKDFGSLEKFKEDFIKRATTLFGSGWNWAPYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkkle >gi|4102997|gb|AAD01640.1|_17:191 (AF019411) Mn-superoxide dismutase [Charybdis feriatus] mllarafarrslragl------------WCRQKHTLPDLPYDYGALEPTI SAEIMQLHHSKHHQTYVNNLNVAEEKLAEAKEKGDVSTIISLAPALRFNG GGHINHSIFWQNLSAD---GGEPEGELLAAINRDFGSVENMKNQLSAQTV AVQGSGWGWLGYIA-EGALQIATCPNQDPLEATtGLVPLFGIDVWEHAYY LQYKNVR--------------------------------rimlkpsgisl igrislqgsmqqsknatscsga >gi|8843846|dbj|BAA97372.1|_47:274 (AB023044) contains similarity to iron-containing superoxide dismutase~gene_id:MWD22.4 [Arabidopsis thaliana] mmnvavtatpssllysplllpsqgpnrrmqwkrngkrrlgtkvavs---- -------GVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENL NKQILGTDLDALSLEEVVLLsynkGNMLPAFNNAAQAWNHEFFWESIQPG --GGGKPTGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWLAYKAnr ldvanavnplpkeEDKKLVIVKTPNAVNPLVWDYSPLLTIDTWEHAYYLD FENRRAEYINTFMEkLVSWETVSTRLESAIARAVQRE-qegtetedeenp ddevpevyldsdidvsevd >gi|6453337|emb|CAB61430.1|_1:195 (AJ251084) superoxide dismutase [Helicobacter pylori] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTY VNNLNNLIKDTDFEKSSLFDI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|2149612|gb|AAC47549.1|_1:195 (U90723) iron superoxide dismutase B [Trypanosoma cruzi] ---------------MVFSIPPLPWGYDGLAAkGLSKQQVTLHYDKHHQG YVTKLNAAAQTNSALATKSIEEIIRTEKGPIFNLAAQIFNHTFYWESMCP N--GGGEPTGKLADEINASFGSFAKFKEEFTNVAVGHFGCGLAWPVKDTN SGKLKVYQTHDAGCPLTEpNLKPLLTCDVWEHAYYVDYKNDLAGYVQAFW NVVNWKNVERQL------------ >gi|1203805|gb|AAC43639.1|_3:208 (U31572) superoxide dismutase [Bradyrhizobium sp. ANU 289]gi|1584011|prf||2122230A superoxide dismutase [Bradyrhizobium sp.] gp-----------------FKIDPLTYPTNALEPHIDAKTMEIHHDRHHQ AYVTNLNNFAKDNPQIAEKPVVEVLAnlgsvpeGFRTGVRNNMGGHANHT MFWQIMGPN---GGKADGEVLAAIDRDLGGMEKFQTDFNAAGGRVFGSGW VFVTVTK-DGKLAIETRPNQDNPIMDGKRALLGNDVWEHAYYLTYQNRRP DYLKAWWNTVNWKAVAERYAAAKAGTLGV-- >gi|97324|pir||A43585_1:191 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Porphyromonas gingivalisgi|150850|gb|AAA25651.1| (M60401) superoxide dismutase [Porphyromonas gingivalis] ---------------MTHELISLPYAVYALAPVISKETVEFHHGKHLKTY VDNLNKLIIGTEFENADLNTI-VQKSEGGIFNNAGQTLNHNLYFTQFRPG --KGGAPKGKLGEAIDKQFGSFEKFKEEFDTAGTTLFGSGWVWLASDA-N GKLSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLWSI VDWDIVESRY------------ >gi|4456296|emb|CAB36929.1|_1:195 (AJ236919) iron superoxide dismutase [Helicobacter pylori] ----------------MFTLRELPFATDSMGDFLSPVAFDFHHGKHHQTY VKNLNNLIKGTDFEKSSLFDI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|4927474|gb|AAD33130.1|AF099015_2_1:211 (AF099015) Fe-containing superoxide dismutase II [Streptomyces coelicolor A3(2)] --------------MALYTLPELPYDYSALAPVISPEIIELHHDKHHAAY VKGANDTLEQLAEAREKESWGSINGLEKNLAFHLSGHILHSIYWQNMTGP KDGGGEPLAQdgvgdLADAITESFGSFAGFKAQLTKAAATTQGSGWGVLA YEPLSGRLIVEQVYDHQGNVGQGATPILVFDAWEHAFYLQYKNQKVDFIE AMWAVVNWQDVAKRHAAAKERGDSL--llkp >gi|3273757|gb|AAC24834.1|_34:251 (AF061852) iron superoxide dismutase 3 [Arabidopsis thaliana] msscvvttscfytisdssirlkspkllnlsnqq-RRRSLRSRGGLKVEAY YGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGY TMEELIKatynnGNPLPEFNNAAQVYNHDFFWESMQPG--GGDTPQKGVL EQIDKDFGSFTNFREKFTNAALTQFGSGWVWLVLKREERRLEVVKTSNAI NPLVWDDIPIICVDVWEHSYYLDYKNDRAKYINTFLNhLVSWNAAMSRMA RAEA-------fvnlgepnipi >gi|4218197|emb|CAA10730.1|_1:195 (AJ132689) iron superoxide dismutase [Helicobacter pylori] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTY LNNLNNLIKGTDFEKSSLFAI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|134662|sp|P09737|SOD1_HALCU_1:200 SUPEROXIDE DISMUTASE [MN] 1gi|99183|pir||A34319 superoxide dismutase (EC 1.15.1.1) (Mn) - Halobacterium cutirubrumgi|148816|gb|AAA72217.1| (J04956) superoxide dismutase [Halobacterium cutirubrum] --------------MSEYELPPLPYDYDALEPHISEQVLTWHHDTHHQGY VNGWNDAEETLAENRETGDHASTAGALGDVTHNGSGHILHTLFWQSMSPA --GGDEPSGALADRIAADFGSYENWRAEFEAAASAA--SGWALLVYDSHS NTLRNVAVDNHDEGALWGSHPILALDVWEHSYYYDYGPDRGSFVDAFFEV VDWDEPTERFEQAAERFE---- >gi|4218199|emb|CAA10731.1|_1:195 (AJ132690) iron superoxide dismutase [Helicobacter pylori] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTY VNNLNNLIKGTEFEKSSLFDI-LTKSSGGVFKNAAQINNHDFYWDCLSPK ---ATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNVRPVYLEKFYGH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|6647843|sp|O35023|SODF_BACSU_64:275 PROBABLE SUPEROXIDE DISMUTASE [FE]gi|7433332|pir||C69709 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) sodF - Bacillus subtilisgi|2619018|gb|AAB84442.1| (AF027868) superoxide dismutase [Bacillus subtilis]gi|2634326|emb|CAB13825.1| (Z99114) superoxide dismutase [Bacillus subtilis] cealkdqiqkrgqldqfedqidkmiealeddqtteedwykqaaalyrdit -ESDDTSERRAYVPIGKHVLPKLPYKYSALEPYISRDIMILHHTKHHQSY VDGLNKAESELKKARATKNYDLITHWERELAFHGAGHYLHSIFWFSMHPN --GKRRPTGALFQMIDLSFGSYSAFKEHFTQASKKVEGVGWAILVWAPRS GRLEILTAEKHQLFSQWDVIPLLPLDVWEHAYYLQYKNDRASYVDHWWNV VDWREAEKRFEQAKE-------vvwkly >gi|3599469|gb|AAC35356.1|_1:184 (AF084831) Fe-SOD [Cinnamomum camphora] -------------------------------PAISGEIMQLHHQNHHQTY VTNYNKALEQLDDAMAKGDAPTVVKLQSAIKFNGGGHINHSIFWKNLIPI HEGGGEPPkGSLGWAIDMHFGSFEALLQKMNAEGAALQGSGWVWLGLDKE LKRLVVETTANQDPLVTKGAslVPLLGIDVWEHAYYLQYKNVRPDYLNNI WKVINWKYASELYEK----------esp >gi|9107021|gb|AAF84727.1|AE004012_1_34:240 (AE004012) superoxide dismutase [MN] precursor [Xylella fastidiosa] mfllrqghltlcliaallasflsfastqpqiap----------------- FTLPPLPYAVSALEPAIDTQTMTLHHDFHHKAYVDNLNAAIKDIPTLSGK TLEQLLAiasTLPPAVRNNAGGDWNHSEFWKMMAPVGK-GGKPSAALETQ IKKDFGSLDAFKERFNKAATGRFGSGWAWMILT--SSGLQITSTPNQDNP LMDVAevrgQPLLALDVWEHAYYLKYKYKRADYLNAWWTVVNWNEVNHLF EVAKKEQHNL--nh >gi|4585263|gb|AAD25353.1|AF114848_1_3:197 (AF114848) manganese-superoxide dismutase precursor [Paxillus involutus] ms---------------GQHTLPDLPYSYDALEPYVSQQIMTLHHKKHHQ TYVTALNAAEVSYAKTATPKERI---ALQAALRFNGGGHINHSLFWKNLA PAASEGKGKGGElkpgpLKDAIDSNFGSLDSLKKEFNAATAAIQGSGWGW LGLNPSTKRLEIATTPNQDP--LLTHIPIIGVDIWEHAFYLQYLNVKVDY LNAIWSVINFKEAEKRF------------teglsgskl >gi|2500826|sp|P80857|SODF_SULSO_4:208 SUPEROXIDE DISMUTASE [FE] tlq------------IQFKKYELPPLPYKIDALEPYISKDIIDVHYNGHH KGYVNGANSLLERLEKVVKGDLQTGQYdiqGIIRGLTFNINGHKLHALYW ENMAPSGKGGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVL YYDTESGNLQIMTFENHFQNHIAEIPIILILDEFEHAYYLQYKNKRADYV NAWWNVVNWDAAEKKLQKYL--------tk >gi|3688568|emb|CAA75583.1|_5:209 (Y15326) iron superoxide dismutase [Sulfolobus solfataricus]gi|4519171|dbj|BAA75509.1| (AB012620) superoxide dismutase [Sulfolobus solfataricus] mtlq------------IQFKKYELPPLPYKIDALEPYISKDIIDVHYNGH HKGYVNGANSLLERLEKVVKGDLQTGQYdiqGIIRGLTFNINGHKLHALY WENMAPSGKGGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAV LYYDTESGNLQIMTFENHFQNHIAEIPIILILDEFEHAYYLQYKNKRADY VNAWWNVVNWDAAEKKLQKYL--------tk >gi|4930136|pdb|1SSS|A_1:203 Chain A, Iron Superoxide Dismutase (Fe-Sod) From The Hyperthermophile Sulfolobus Solfataricus. 2.3 A Resolution Structure Of Recombinant Protein With A Covalently Modified Tyrosin In The Active Site.gi|4930137|pdb|1SSS|B Chain B, Iron Superoxide Dismutase (Fe-Sod) From The Hyperthermophile Sulfolobus Solfataricus. 2.3 A Resolution Structure Of Recombinant Protein With A Covalently Modified Tyrosin In The Active Site ------------IQFKKYELPPLPYKIDALEPYISKDIIDVHYNGHHKGY VNGANSLLERLEKVVKGDLQTGQYdiqGIIRGLTFNINGHKLHALYWENM APSGKGGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYD TESGNLQIMTFENHFQNHIAEIPIILILDEFEHAYYLQYKNKRADYVNAW WNVVNWDAAEKKLQK----------yl >gi|548946|sp|Q03303|SOD1_HALSG_1:200 SUPEROXIDE DISMUTASE [MN] 1gi|148820|gb|AAA73373.1| (M97484) Mn-superoxide dismutase [Halobacterium sp.] --------------MSEYELPPLPYDYDALEPHISEQVLTWHHDTHHQGY VNGWNDAEETLAENRETGDHASTAGALGDVTHNGSGHILHTLFWQSMSPA --GGDEPSGALADRIVADFGSYENWRAEFEAAASAA--SGWALLVYDSHS NTLRNVAVDNHDEGALWGSHPILALDVWEHSYYYDYGPDRGSFVDAFFEV VDWDEPTERFEQAAERFE---- >gi|7674342|sp|Q9ZD15|SODF_RICPR_14:209 SUPEROXIDE DISMUTASE [MN-FE]gi|7433326|pir||F71657 superoxide dismutase (EC 1.15.1.1) (Mn) sodB - Rickettsia prowazekiigi|3861084|emb|CAA14984.1| (AJ235272) SUPEROXIDE DISMUTASE (sodB) [Rickettsia prowazekii] mtycskanqpsyp-----------------FILPDLPYDKESFKPHFTRE TFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIEwssqNAEVAILNN ASQIWNHTFFWYSIKPH--GGGKPSGKVFEQISKDFGSFEQFCAQFKQEA VGQFGSGWTWVVYH--DNKLQIIKTSNAGTPIVNFMKPILACDVWEHAYY IDYRNKRSDYIDIFIRhMINWKFVEDNLIQ---------- >gi|3915003|sp|O51917|SODF_STRCO_1:203 SUPEROXIDE DISMUTASE [FE-ZN] 1 (FESOD I) (SOD2)gi|7481444|pir||T42080 probable superoxide dismutase - Streptomyces coelicolorgi|2707213|gb|AAC46274.1| (AF012087) superoxide dismutase [Streptomyces coelicolor]gi|4927471|gb|AAD33128.1|AF099014_2 (AF099014) Fe-containing superoxide dismutase I [Streptomyces coelicolor A3(2)]gi|6900932|emb|CAB71808.1| (AL138662) superoxide dismutase [Fe-Zn] (EC 1.15.1.1) [Streptomyces coelicolor A3(2)] --------------MSVYTLPELPYDYSALAPVISPEIIELHHDKHHAAY VKGANDTLEQLAEARDKETWGSINGLEKNLAFHLSGHILHSIYWHNMTGD --GGGEPldkdgVGELADAIAESFGSFAGFRAQLTKAAATTQGSGWGVLA YEPLSGRLIVEQIYDHQGNVGQGSTPILVFDAWEHAFYLQYKNQKVDFID AMWAVVNWQDVARRYEAAK--------srtntlllap >gi|4809202|gb|AAD30139.1|AF141866_1_4:204 (AF141866) Fe-Zn-superoxide dismutase [Streptomyces griseus] mat-----------------YTLPELPYDYAALEPVINPQIIELHHDKHH AAYVKGANDTLEQLEEARDKEAWGAINGLQKNLAFHLSGHILHSIYWHNM TGD--GGGEPLAAdgvgdLADAITESFGSYAGFKSQLTKAAATTQGSGWG VLAYEPVSGKLIVEQVYDHQGNVGQGSVPILVFDAWEHAFYLQYKNQKVD FIEAMWQVVNWQDVAKRYAAAKE-------rvnvlllap >gi|4218195|emb|CAA10729.1|_1:195 (AJ132688) iron superoxide dismutase [Helicobacter pylori] ----------------MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHRTY VNNLNNLIKGTDFEKSSLFAI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATAFSDELKGALEKDFGSLEKFKEDFIKSATTLFGSAWNWAAYNLDT QKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNVRPVYLEKFYGH INWHFVSQCYEWAKK-------eglgsvdyyinelvhkka >gi|134663|sp|P09224|SODM_HALHA_1:196 SUPEROXIDE DISMUTASE [MN] 2gi|66382|pir||DSHSNH superoxide dismutase (EC 1.15.1.1) (Mn) - Halobacterium halobiumgi|148794|gb|AAA72750.1| (M24544) superoxide dismutase (EC 1.15.11) [Halobacterium halobium]gi|148812|gb|AAA72770.1| (M26502) superoxide dismutase-like protein [Halobacterium cutirubrum] --------------MSQHELPSLPYDYDALEPHISEQVVTWHHDTHHQSY VDGLNSAEETLAENRETGDHASTAGALGDVTHNGCGHYLHTMFWEHMSPD --GGGEPSGALADRIAADFGSYENWRAEFEVAAGAA--SGWALLVYDPVA KQLRNVAVDNHDEGALWGSHPILALDVWEHSYYYDYGPDRGSFVDAFFEV IDWDPIAANYDDVV--------slfe >gi|5771529|gb|AAD51417.1|AF173990_1_1:200 (AF173990) iron superoxide dismutase [Anabaena PCC7120] ---------------MAFVQEPLPYDFNALEQyGMKGETFEYHYGKHHKA YVDNLNKLTDGTELADKSLEEVIQIafkdAYKAGIFNNAAQVWNHTFFWN SLKPA--GGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGSGWAWLI DD--GGTLKVTKTPNAENPLAHGQKALLTLDVWEHAYYIDFRNARPAFIK NYLDnLVNWDFAAANYAKA--------- >gi|8928537|sp|P53640|SODF_CAMJE_1:203 SUPEROXIDE DISMUTASE [FE]gi|2117674|pir||I40775 superoxide dismutase (EC 1.15.1.1) (Fe) - Campylobacter jejunigi|473589|gb|AAA53139.1| (U08132) iron-superoxide dismutase [Campylobacter jejuni]gi|6967662|emb|CAB72652.1| (AL139074) superoxide dismutase (Fe) [Campylobacter jejuni] ----------------MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTY VTNLNNLIKDTEFAGKDLVSI-IKTSNGGVFNNAAQVYNHDFYFDCIKPS --TGCGCGGScqsidanLQAALEKEFGSLENFKAEFIKGATGVFGSGWFW LVYNTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAY LEKFYAHINWEFVAKAYEWALK-------egmgsvsfyanelhpvk >gi|148814|gb|AAA72704.1|_1:196 (M22408) superoxide dismutase [Halobacterium halobium] --------------MSQHELPSLPYDYDALEPHISEQVVTWHHDTHHQSY VDGLNSAEETLAENRETGDHASTAGALGDVTHNGCGHYLHTMFWEHMSPD --GGGEPSGALADRIAADFGSYENWRAEFEVAAGAA--SGWALLVYDPVA KQLRNVAVDNHDEGALWGSHPILALDVWEHSYYYDYGPDRGTFVDAFFEV IDWDPIAANYDDVV--------slfe >gi|6573494|pdb|1B06|A_4:208 Chain A, Superoxide Dismutase From Sulfolobus Acidocaldariusgi|6573495|pdb|1B06|B Chain B, Superoxide Dismutase From Sulfolobus Acidocaldariusgi|6573496|pdb|1B06|C Chain C, Superoxide Dismutase From Sulfolobus Acidocaldariusgi|6573497|pdb|1B06|D Chain D, Superoxide Dismutase From Sulfolobus Acidocaldariusgi|6573498|pdb|1B06|E Chain E, Superoxide Dismutase From Sulfolobus Acidocaldariusgi|6573499|pdb|1B06|F Chain F, Superoxide Dismutase From Sulfolobus Acidocaldarius tqv------------IQLKRYEFPQLPYKVDALEPYISKDIIDVHYNGHH KGYVNGANSLLDRLEKLIKGDLPQGQYdlqGILRGLTFNINGHKLHAIYW NNMAPAGKGGGKPGGALADLIDKQYGSFDRFKQVFSESANSLPGSGWTVL YYDNESGNLQIMTVENHFMNHIAELPVILIVDEFEHAYYLQYKNKRGDYL NAWWNVVNWDDAEKRLQKYL--------nk >gi|548947|sp|Q03299|SOD2_HALSG_1:196 SUPEROXIDE DISMUTASE [MN] 2gi|148818|gb|AAA73372.1| (M97483) superoxide dismutase-like protein [Halobacterium sp.] --------------MSQHELPSLPYDYDALEPHISEQAVTWHHDTHHQSY VDGLNSAEENLAGNRETGDHASTAGALGDVTHNGCGHYLHTMFWEHMSPD --GGGEPSGALADRIAADFGSYENWRAEFEVAAGAA--SGWALLVYDPVA KQLRNVAVDNHDEGALWGSHPILALDVWEHSYYYDYGPDRGSFVDAFFEV IDWDPIAANYDDVV--------slfe >gi|541376|pir||PN0614_1:162 superoxide dismutase (EC 1.15.1.1) (Mn) - Bacillus circulans (fragment) -----------------------PYAYNALEPHIDKETMTIHTSKHHNTY VTNLNKAIEGSALAEKSVDELVADlnavpeDIRTAVRNNGGGHANHSLFW TLLSPN--GGGEPTGELAEEIKSTFGSFDQFKEKFAAAAAGRFGSGWAWL VVN--NGKLEITSTPNQDSPLSEGKTPVLGLDVWEHAYY----------- ---------------------------- >gi|1072933|pir||S47167_1:203 superoxide dismutase (EC 1.15.1.1) (Fe) - Campylobacter jejunigi|531402|emb|CAA54123.1| (X76692) superoxide dismutase [Campylobacter jejuni] ----------------MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTY VTNLNNLIKDTEFAGKDLVSI-IKTSNGGVFNNAAQVYNHDFYFDCIKPS --TGCGCGGScqsidanLQAALEKEFGSLENFKAEFIKGATGVFGSGWFW LVYNTKNQKLEFVGTSNAATPNTEDKVPLLVVDVWEHAYYVDHRNARPAY LEKFYAHINWEFVAKAYEWALK-------egmgsvsfyanelhsvk >gi|586008|sp|Q08713|SODF_SULAC_5:209 SUPEROXIDE DISMUTASE [FE]gi|479542|pir||S34616 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Sulfolobus acidocaldariusgi|396203|emb|CAA44993.1| (X63386) superoxide dismutase [Sulfolobus acidocaldarius] mtqv------------IQLKRYEFPQLPYKVDALEPYISKDIIDVHYNGH HKGYVNGANSLLDRLEKLIKGDLPQGQYdlqGILRGLTFNINGHKLHAIY WNNMAPAGKGGGKPGGALADLINKQYGSFDRFKQVFSESANSLPGSGWTV LYYDNESGNLQIMTVENHFMNHIAELPVILIVDEFEHAYYLQYKNKRGDY LNAWWNVVNWDDAEKRLQKYL--------nk >gi|7110573|gb|AAF36989.1|AF236110_1_6:210 (AF236110) Fe-superoxide dismutase [Acidianus ambivalens] msslt-------------YLKKYELPPLPYNLDALEPYISKEIIDVHYNG HHRGYVNGANSFVDRVNKILKGEISSGQYdiqGLLRGLVFNINGHKLHSL YWQNMAPAGKGGGKPGGVIGDLIEKQYGSFEKFKALFTEAANSLPGTGWT VLYYEVENGNLQIMTFENHFQNHIAELPILLILDEFEHAYYLQYKNKRAD YVNNWWNLVNWDFADKKLQQYMK-------k >gi|3287977|sp|P27084|SODM_PEA_34:230 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|945044|gb|AAA74442.1| (U30841) manganese superoxide dismutase precursor [Pisum sativum] maartllcrktlssvlrndakpigaaiaaastq-----------SRGLHV FTLPDLAYDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLHDAVAK ADTSTTVKLQNAIKFNGGGHINHSIFWKNLAPVSEGGGEPPKEsLGWAID TNFGSLEALIQKINAEGAALQ-----WLGLDKDLKRLVVETTQDPLVTKG ASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKHASEVYEK---- ------ess >gi|1711433|sp|P53639|SODF_CAMCO_1:203 SUPEROXIDE DISMUTASE [FE]gi|1072925|pir||S47166 superoxide dismutase (EC 1.15.1.1) (Fe) - Campylobacter coligi|531381|emb|CAA54124.1| (X76693) superoxide dismutase [Campylobacter coli] ----------------MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTY VTNLNNLIKYTEFASKDLVSI-IKSSSGGVFNNAAQVYNHDFYFDCIKPI --TGCGCGGScqsmdanLQAALEKEFGSLENFKAEFIKGATGVFGSGWFW LVYNTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAY LEKFYAHINWEFVAKAYEWALK-------egmgsvsfyanelhpvk >gi|1711436|sp|P53641|SODF_PSEAE_1:192 SUPEROXIDE DISMUTASE [FE]gi|1084031|pir||B53294 superoxide dismutase (EC 1.15.1.1) (Fe) - Pseudomonas aeruginosagi|409767|gb|AAA16786.1| (L25675) superoxide dismutase [Pseudomonas aeruginosa] ---------------MAFELPPLPYEKNALEPHISAETLEYHHDNNHNTY VVNLTNLIPGTEFEGKSLEEI-VKSSSGGIFNNAAQVWNHTFYWNCLSPN --GGGQPTGGLADAINAGFGSFDKFKEEFTKTSVGhlRFRSGW--LVKKP -DGSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRt--ASEVRRAF WNLVNWDFVAKNFAA---------- >gi|134648|sp|P19666|SODF_TETPY_1:196 SUPEROXIDE DISMUTASE [FE]gi|102388|pir||A39223 superoxide dismutase (EC 1.15.1.1) (Fe) - Tetrahymena pyriformis ----------------------LNYEYSDLEPVLSAHLLSFHHGKHHQAY VNNLNATYEQIAAATKENDAHKIATLQSALRFNLGGHVNHWIYWDNLAPV KSGGGVLPDEhspLTKAIKEKWGSYENFITLFNTRTAAIQGSGWGWLGYD TVSKSLRLFELGNQDMPEWSSIVPLLTIDVWEHAYYLDYQNLRPKYLTEV WKIVNWREVEKRYLQAIE------- >gi|7388256|sp|O75007|SODM_PENCH_6:210 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|3642873|gb|AAC36583.1| (AF026523) manganese superoxide dismutase; Mn-SOD [Penicillium chrysogenum]gi|3642877|gb|AAC36585.1| (AF026790) manganese superoxide dismutase [Penicillium chrysogenum] mtsqt-----------------HTLPPLPYAYDALEPVISKQIMELHHQK HHQTYINNLNAALSAQASATASNDVPTLISLQQKLRFNGGGHINHSLFWK NLTPPGTPANDIAGApaLREAIVSRWGSHEAFVKAFGAELLGLQGSGWGW LVSKGgAKGRLEIVTTKDQD-PVNAPDVPVFGVDMWEHAYYLQYLNNKAG YVEGIWKIIHWAEAEKRYTAGVENPLKL-- >gi|541031|pir||PN0615_2:169 superoxide dismutase (EC 1.15.1.1) (Fe) - Enterobacter aerogenes (fragment) a-----------------YELPQLPYAYDALEPHIDAKTXEIHHSKHHNT YVTNLNAAVEGTEFADKDINDLIAMldalpaDKQTAVRNNGGGHANHTLF WEVIAPG--GSNTPVGEVAKAIDAKFGSFDAFKEEFAKAATTRFGSGWAW LIVD--GDSVAVTSTPNQDSPVMEGKTPVLGLDVWEHAYY---------- ----------------------------- >gi|620096|emb|CAA57149.1|_1:162 (X81386) superoxide dismutase [Mycobacterium gordonae] ----------------------------------------LHHSKHHATY VKGVNDAVAKLEEARAKGDHSAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGDLAAAIDDQFGSFDKFQAQFSAAANGLQGSGWAVLGYDTLG GRLLTFQLYDQQANVPLGVIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWD------------------d >gi|620094|emb|CAA57148.1|_1:162 (X81385) superoxide dismutase [Mycobacterium fortuitum] ----------------------------------------LHHSKHHAAY VKGVNDAVAKLDEARANGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG DRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWKV VNWD------------------d >gi|620114|emb|CAA57153.1|_1:162 (X81390) superoxide dismutase [Mycobacterium simiae] ----------------------------------------LHHSKHHATY VKGLNDAIAKLEEARANDDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTRG DRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWD------------------d >gi|2352423|gb|AAC38829.1|_1:195 (AF003963) iron superoxide dismutase [Leishmania chagasi] ---------------MPFAVQPLPYPHDALASkGMSKEQVTFHHEKHHKG YAVKLNAAAESNSGLASKSLVDIIKSEKGPAFNCAAQIFNHDFFWRCLSR E--AGGEPSGPLASAIVDSFGTFASFKKEFTDAPNGHFGSGWAWLVKDKS SGKLKVLQTHDAGCPLTEpNLVPMLTCDIWEHAYYIDYRNDRASYVNAFW NMVDWDFASSQL------------ >gi|3273560|gb|AAC24764.1|_24:220 (AF036321) manganese superoxide dismutase precursor [Pneumocystis carinii] mlksfrdlvfkktiknsrffshs----------------KHVLPSLPYDY QALEPYLSADLIELHYNQHHRAYVTNLNKTIEKYYEGNESSLDSFINrlN LLTSIKFFAGGHINHSLYWENLLPNKQGGGEIiNGPLVEAIKKEWKSVDE FIRIFNMQLAGIQGSGWAWLVKSPFSQRLSIQITMNQDV--VTQGKVILG IDAWEHSYYVQYLNNKTKYFENIWNVINWKVMNQRFEQ---------- >gi|223570|prf||0901224A_3:203 dismutase,Mn superoxide [Saccharomyces cerevisiae] kv------------------TLPDLKWDFGALEPYISGQINELHYTKHHQ TYVNGFNTAVDQFQELSDLLAKEPSPanarkmiAIQQNIKFHGGGFTNHC LFWENLAPESQGGGEPPtGALAKAIDEQFGSLDELIKLTNTKLAGVQGSG WAFIVKNLsNGGKLEITSTYNQDT-VTGPLVPILGLDVWEHAYYLQYQNK KADYFKAIWNVVNWKEASRRFD----------- >gi|2654175|gb|AAB87697.1|_1:196 (AF034841) superoxide dismutase [Desulfovibrio vulgaris] -------------------MPPLPYPDTALEPAISARTISFHYGKHTAAY YANLNKAVAGTPMATMRLEDVVKLvagdPAKGVLFNNAAHLWNHTFYWAG MKPG--GGGTPPAKVADALKASFGSVEACMEQLSEAAKTQFASGWAWLAK GTENGKpvLKVMKTGNADNPMTQGLTPVLTIDVWEHAYYLDYQNKRPDYV KAFFEkLVNWDEVATRL------------ >gi|7433337|pir||JG0179_27:243 superoxide dismutase (EC 1.15.1.1) (Fe) - ricegi|4164149|dbj|BAA37131.1| (AB014056) iron-superoxide dismutase [Oryza sativa] maafasalrvlpsppaavprrlrsre-QRQGCRSRRYSKVVAYYALTTPP YKLDALEPYISKRTVELHWGKHQQDYVDSLNKQLATSMFYGYTLEELIKE aynnGNPLPEYNNAAQVWNHHFFWESMQPE--GGGSPGRGVLQQIEKDFG SFTNFREEFIRSALSLLGSGWVLLVLKRKERKLSVVHTQNAISPLALGDI PLINLDLWEHAYYLDYKDDRRMYVTNFIDhLVSWDTVTLRMMRAEA---- ---fvnlgepnipva >gi|7433333|pir||A70119_10:213 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) sodA homolog - Lyme disease spirochetegi|2688037|gb|AAC66537.1| (AE001126) superoxide dismutase (sodA) [Borrelia burgdorferi] mswqklkqe--------------VFMFKLPELGYDYDAVEPYIDAKTMEI HHSKHHNGFVMNLNSILEKMGKIHLTDVSNILKnihdfpeEFQTLIRNNA GGYSNHTLYFRTLRPG--NKDNLFEKFKDDINAAFGSLDVLKANLKDTAM KIFGSGWAWLVLCP-ESGLKVISMPNQDSPLMNSYKPILGIDVWEHAYYL KYQNRRIEYVDAFLKALNWEEVSKVYNEVI--------n >gi|1711444|sp|P46728|SODM_MYCIT_1:162 SUPEROXIDE DISMUTASE [MN]gi|641941|emb|CAA57150.1| (X81387) superoxide dismutase [Mycobacterium intracellulare] ----------------------------------------LHHSKHHATY VKGVNDALSKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGELAAAIDDAFGSFDRFRAQFSAAANGLQGSGWAVLGYDTLG NRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWD------------------d >gi|7328179|emb|CAB82579.1|_5:203 (AJ272498) superoxide dismutase (Fe) [Methanosarcina barkeri] make----------------LYKLPPLKFGYGDLAPYISEEQLKLHHDKH HQAYVTNANAAIEMMDKARKEGTDFDYKATAKAFSFNLAGHVLHDYFWWE MTPASNSSKEPVGELSEVIKEDFGSFDRFKKEFSQVASSVEGSGWAVLTY CKDTERLMIMQIEKHNVNLVPDYPIIMDLDTWEHAYYIDYRNDRAKFIEA FWNIVDWEEIDKYFRKMRK------- >gi|3915001|sp|O30563|SODM_BORBU_1:202 PROBABLE SUPEROXIDE DISMUTASE [MN]gi|2291109|gb|AAB65252.1| (AF011226) superoxide dismutase [Borrelia burgdorferi] ----------------MFKLPELGYDYDAVEPYIDAKTMEIHHSKHHNGF VMNLNSILEKMGKIHLTDVSNILKnihdfpeEFQTLIRNNAGGYSNHTLY FRTLRPG--NKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAW LVLCP-ESGLKVISMPNQDSPLMNSYKPILGIDVWEHAYYLKYQNRRIEY VDAFLKALNWEEVSKVYNEVI--------n >gi|2511749|gb|AAC64207.1|_1:200 (AF022931) superoxide dismutase [Rhodobacter capsulatus] ---------------MAFELPALPYAHDALASlGMSKETLEYHHDLHHKA YVDNGNKLIAGTEWEGKSVEEIVKGtycagaVAQSGIFNNASQHWNHAQF WEMMGPG--EDKKMPGALEKALVESFGSVAKFKEDFAAAGAGQFGSGWAW LVKDS-DGALKITKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAY LTNFLDkLVNWENVASRM------------ >gi|1711450|sp|P50913|SODM_MYCSC_1:163 SUPEROXIDE DISMUTASE [MN]gi|620112|emb|CAA57152.1| (X81389) superoxide dismutase [Mycobacterium scrofulaceum] ----------------------------------------LHHSKHHATY VKGVNDAVAKLQEARANDDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLG SRLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNWAE----------------- >gi|620090|emb|CAA57147.1|_1:161 (X81384) superoxide dismutase [Mycobacterium avium] ----------------------------------------LHHSKHHATY VKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLG SRLLTFQLYDQRANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKAFWNV VNW-------------------ad >gi|417789|sp|Q03300|SOD1_HALVO_4:197 SUPEROXIDE DISMUTASE [MN] 1gi|149033|gb|AAA73375.1| (M97486) superoxide dismutase [Haloferax volcanii] msd-----------------YELDPLPYEYDALEPHISEQVLTWHHDTHH QGYVNGWNADDETLAENREAGEFGSSAGAVRNVTHNGSGHILHDLFWQNM SPE--GGDEPEGLLAERIAEDFGSYEAWKGEFEAAAGAA--AGWALLVYD SFSNQLRNVVVDKHDQGALWGSHPILALDVWEHSYYHDYGPARGDFVSAF FEVVDWDEPAARYEQAVE-------lfe >gi|417790|sp|Q03301|SOD2_HALVO_3:196 SUPEROXIDE DISMUTASE [MN] 2gi|149035|gb|AAA73376.1| (M97487) superoxide dismutase [Haloferax volcanii] ms-----------------YELDPLPYEYDALEPHISEQVLTWHHDTHHQ GYVNGWNADDETLAENREAGEFGSSAGAVRNVTHNGSGHILHDLFWQNMS PE--GGDEPEGLLAERIAEDFGSYEAWKGEFEAAAGAA--AGWALLVYDS FSNQLRNVVVDKHDQGALWGSHPILALDVWEHSYYHDYGPARGDFVSAFF EVVDWDEPAARYEQAVE-------lfe >gi|417791|sp|Q03302|SODM_HALMA_8:197 SUPEROXIDE DISMUTASE [MN]gi|148742|gb|AAA73374.1| (M97485) superoxide dismutase [Haloarcula marismortui] msehsnp------------------ELPPLPYDYDALEPHISEQVLTWHH DTHHQGYVNGLESAEETLAENRDAGDFGSSAAAWVNVTHNGCGQDLHTLF WENMDPN--GGGEPEGELLDRIEEDFGSYEGWKGEFEAAASAA--GGWAL LVYDPCAKQLRNVPVDKHDQGALWGSHPILALDVWEHSYYYDYGPARGDF IDAFFEVVDWDKAAEEYEK----------svshfe >gi|3334330|sp|O13401|SODM_CANAL_30:233 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|2623885|gb|AAB86583.1| (AF031478) manganese-superoxide dismutase precursor [Candida albicans] mfsirsssrvllkassattratlnaaask-----------TFTRSKYSLP ELDYEFSATEPYISGQINEIHYTKHHQTYVNNLNASIEQAVEAKSKGEVK KLVALEKAINFNGGGYLNHCLWWKNLAPVSQGGGQPPSEdskLGKQIVKQ FGSLDKLIEITNGKLAGIQGSGWAFIVKNKANGDtIDVITTANQDTVTDP NLVPLIAIDAWEHAYYLQYQNVKADYFKNLWHVINWKEAERRFE------ -----f >gi|2738984|gb|AAC48291.1|_1:192 (AF022423) iron-containing superoxide dismutase [Trichomonas vaginalis] ----------------MFTMEHPAYLKTGLPGFLTQHAVEVHVTKHHQSY IDTANKLIVGSGFEGKPIEEI-IQKAQGPLFNNVAQHFNHSFFWKSLSAE ---KVAVPAHVAELLKKNFGSVEKFQETFTAKASTVFGSGWAYLYKTK-D GKLEIGQYSNAANPVKDGLTPILTVDTWEHAWYIDYENRKAEYFKNYWNH VNWNFVEQNLKAA---------gl >gi|6653273|gb|AAF22652.1|AF201090_1_1:168 (AF201090) iron superoxide dismutase [magnetite-containing magnetic vibrio] ---------------MAFTLPDLPYAKDALAPHISANTFDFHHGKHHKAY VVNLNGLVADTPMAAMSLEDIMKAtagdASKAGIFNNAAQVWNHTFFWSS MKPN--GGGAPTGAIAAAIDEAFGSYDAFKEAFKTAGMTQFGSGWAWLVK K--GDKLEIVKTPNAECPLTRGATPILTCDVWDHAYY------------- -------------------------- >gi|1711445|sp|P50912|SODM_MYCKA_1:162 SUPEROXIDE DISMUTASE [MN]gi|641943|emb|CAA57151.1| (X81388) superoxide dismutase [Mycobacterium kansasii] ----------------------------------------LHHSKHHATY VKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLG NKLLIFQVYDHQTNFPLGIIPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV VNWD------------------d >gi|6321796|ref|NP_011872.1|_25:232 Manganese-containing superoxide dismutase; Sod2pgi|134681|sp|P00447|SODM_YEAST SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSORgi|66379|pir||DSBYN superoxide dismutase (EC 1.15.1.1) (Mn) precursor - yeast (Saccharomyces cerevisiae)gi|4514|emb|CAA26092.1| (X02156) MnSOD [Saccharomyces cerevisiae]gi|500704|gb|AAB68939.1| (U10400) Sod2p: Superoxidase dismutase [Saccharomyces cerevisiae] mfaktaaanltkkgglsllsttar--------------RTKVTLPDLKWD FGALEPYISGQINELHYTKHHQTYVNGFNTAVDQFQELSDLLAKEPSPan arkmiAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPtGALAKAIDEQ FGSLDELIKLTNTKLAGVQGSGWAFIVKNLsNGGKLDVVQTYNQDT-VTG PLVPLVAIDAWEHAYYLQYQNKKADYFKAIWNVVNWKEASRRFDAGK--- -----i >gi|2398587|emb|CAA72335.1|_13:224 (Y11598) MnSOD [Candida sp.] mlssaikrsavgIARRSVVSSSVGAVRTKVSLPDLDWDFGALEPHISGQI NEIHYTKHHQTYVNGYNQAIEQAARPRQGEVKK-TIELQKAINFHGGGYT NHCLFWKNLAPEKQGGGEPPAEdseFAKRIVEQYGSLDNLKAITNGKLAG IQGSGWAFIVKNKeNGGALDVITTANQDT-VLGPFVPLVAIDAWEHAYYL QYQNVKADYFKAIWNVINWKEAEKRY------------lin >gi|2117678|pir||I39745_1:162 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Actinomyces viscosus (fragment)gi|639962|emb|CAA57144.1| (X81381) superoxide dismutase [Actinomyces viscosus] ----------------------------------------LHHSKHHAAY VAGANAALEALAAAREDGDLGAINLWEKNLAFNLGGHTNHSVFWKNLSPN --GGGQPEGELAEAIKDSFGSFEKFQAQFTATALGIQGSGWAVLAYDSIS GKLLIFQLFDQQANVPVGTTPLFMVDMWEHAFYLDYLNVKADYVKAIWNV VNWD------------------d >gi|1916001|gb|AAC47735.1|_1:193 (U66074) superoxide dismutase 2 [Tritrichomonas foetus] ----------------MFSIEPVSFLESGLPNFLTPHAVQIHVTKHHQGY VDMANKIVPESEFKGKSVEEI-IQNASGPVFNNVAQHFNHSFFWKCLTAT ---TQEVPAAVASFLSKHFESVDNFKAQFVQKASTVFGSGWCYLAVNK-D GSVSINQYSNALNPVKDGGVPLLCVDTWEHAWYIDYENRKAEYFNKFWGV VNWNFVEENLKKAK--------li >gi|1915999|gb|AAC47734.1|_1:192 (U66073) superoxide dismutase 1 [Tritrichomonas foetus] ----------------MFSIAPIPYMETGISGFLTKHAVEIHVTKHHQAY VDFANKNVPGTEFEGKPIEEI-IQKATGPLFNNVAQHFNHAFFWNCLTAK ---KQEVPAGVASFLAKHFESVDNFKAQFVQKASTVFGSGWCYLAQNK-D KTISINQYSNALNPVKDGGVPLLCVDTWEHAWYIDYENRKAEYFNKFWDA CNWEFLEKNLKAA---------gli >gi|5803267|dbj|BAA83577.1|_27:247 (AP000399) ESTs C26547(C12563),AU077938(C12563) correspond to a region of the predicted gene.~Similar to iron-superoxide dismutase (AB014056) [Oryza sativa] maafasalrvlpsppaavprrlrsre-QRQGCRSRRYSKVVAYYALTTPP YKLDALEPYISKRTVELHWGKHQQDYVDSLNKQLATSMFYGYTLEELIKE aynnGNPLPEYNNAAQVWNHHFFWESMQPE--GGGSPGRGVLQQIEKDFG SFTNFREEFIRSALSLLGSGWVWLVLKRKERKFSVVHTQNAISPLALGDI IMLNIDistfVFQHAYYLDYKDDRRMYVTNFIDhLVSWDTVTLRMMRAEA -------fvnlgepnipva >gi|2352425|gb|AAC38830.1|_20:230 (AF003964) iron superoxide dismutase [Leishmania chagasi] mfrrvsmkaatatapvgfa----FLCYHTLPLLRYPAELPTLGFNYkDGI QPVMSSRQLELHYKKHHSAYVDKLNTLGKGCEGKTIEEIILATSgtTESK VMNNQAAQHFNHSFFWKCLSPG---GKKIPKTLENAIANEFGSVDDFTVS FQQAGVNNFGSGWTWLCVDPRTKELRIDNTSNAGCPLTSGLRPIFTADVG EHAYYKDFENRPRDYLKELWQIVDWEFVCQMYEKATK------- >gi|5902908|dbj|BAA84485.1|_1:151 (AB009855) iron-containing superoxide dismutase [Escherichia coli]gi|5902918|dbj|BAA84490.1| (AB026684) iron-containing superoxide disumutase [Escherichia coli] ----------------------LPYAKDALAPHISAETIEYHYGKHHQTY VTNLNNLIKGTAFEGKSLEEI-IRSSEGGVFNNAAQVWNHTFYWNCLAPN --AGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNS-D GKLAIVSTSNAGTPLTTDATPLLTVDV----------------------- ---------------------- >gi|2148070|pir||I40858_1:162 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Corynebacterium pseudodiphtheriticum (fragment)gi|620075|emb|CAA57146.1| (X81383) superoxide dismutase [Corynebacterium pseudodiphtheriticum] ----------------------------------------LHHSKHHNTY VQGANAALDALEEERNGEANPDRIRALSKNLAFQPGHTNHSIFWKNLSPN --GGGEPTGELAEAIDRDFGSFEKFKAHFSAAALGLQGSGWAVLGYDHIA GRLLVEQLTDQQGNTSVNFTPLLMLDMWEHAFYLQYKNVKPDYVKAVWNV VNWD------------------d >gi|6707934|gb|AAF25725.1|AF146753_1_1:172 (AF146753) manganese-dependent superoxide dismutase [Pneumocystis carinii f. sp. hominis] ----------------------------ALEPYLSHDLLELHYNKHHRAY VTNFNLALEKYNEYDSSVDLATRMNLLTSIKFHGGGHINHSLYWESLLPP KEGGGQViDGPLVDAIKKEWGSVDQFIRTFNTHLSGIQGSGWCWLVKIPS SRQLFIQTTMNQDL--VTQGKVILGIDAWEHAYYIQYFNNKVKYFENIWN VI--------------------- >gi|1174381|sp|P42821|SODM_CORDI_1:161 SUPEROXIDE DISMUTASE [MN]gi|2117679|pir||I40677 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Corynebacterium diphtheriae (fragment)gi|620048|emb|CAA57145.1| (X81382) superoxide dismutase [Corynebacterium diphtheriae] ----------------------------------------LHHSKHHANY VNGANTALEKLQKARENGEIGAVVtALSKDLAFNLGGHTNHSIFWKNLSP N--GGGEPTGALAEAIAKEFGSFEKFKDHFSAAALGLQG--WAVLGYDHI GGRLVIEQLTDQQGNISANLTPLLMLDMWEHAFYLQYKNVKADYVKAVWN VVNWD------------------d >gi|7576318|dbj|BAA94551.1|_1:152 (AB033433) iron-cofactored superoxide dismutase [Photobacterium damselae subsp. piscicida] ----------------------LPYAKDALEPHISAETLEYHYGKHHNTY VVKLNGLVEGTDLADKSLEEI-IKSSAGGVFNNAAQVWNHTFYWHCLSPN --AGGEPTGEVAEAINKAFGSFEAFKAQFTDSAVNNFGSGWTWLVKNT-D GTLAIMNTSNAGCPIVEeGITPLLTVDV---------------------- ----------------------- >gi|6707932|gb|AAF25724.1|AF146752_1_1:172 (AF146752) manganese-dependent superoxide dismutase [Pneumocystis carinii f. sp. oryctolagi] ----------------------------ALEPYLSRELIELHHNKHHRAY VTNFNLALEKYNQNDSSVDLATRVNLLTLIKFHGGGHINHSLYWQNLLPP KEGGGKIvDGSLVDAIKKQWGSVDQFIQAFNSHLSGIQGSGWCWLVKIDP SRKLFIQTTMNQDL--VTQGKVILGIDAWEHAYYVQYFNDKVKYFENIWN VV--------------------- >gi|7576380|dbj|BAA94565.1|_1:152 (AB033447) iron-cofactored superoxide dismutase [Aeromonas ichthiosmia] ----------------------LPYAINALEPHISQETLEYHHGKHHKTY VVNLNNLVPGTEFEGKSLEEI-IKTSNGGIFNNAAQIWNHTFYWHCLSPN --GGGEPSGALAEAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576370|dbj|BAA94560.1|_1:152 (AB033442) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576378|dbj|BAA94564.1| (AB033446) iron-cofactored superoxide dismutase [Aeromonas ichthiosmia]gi|7576402|dbj|BAA94576.1| (AB033458) iron-cofactored superoxide dismutase [Aeromonas veronii]gi|7576404|dbj|BAA94577.1| (AB033459) iron-cofactored superoxide dismutase [Aeromonas veronii]gi|7576426|dbj|BAA94588.1| (AB033470) iron-cofactored superoxide dismutase [Aeromonas hydrophila] ----------------------LPYAINALEPHISQETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSNGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576382|dbj|BAA94566.1|_1:152 (AB033448) iron-cofactored superoxide dismutase [Aeromonas jandaei]gi|7576384|dbj|BAA94567.1| (AB033449) iron-cofactored superoxide dismutase [Aeromonas media] ----------------------LPYAINALEPHISQETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGVFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576328|dbj|BAA94556.1|_1:152 (AB033438) iron-cofactored superoxide dismutase [Aeromonas enteropelogenes] ----------------------LPYAINALEPHISQETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSSGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAITKSFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|8573766|emb|CAB94731.1|_1:197 (AJ404469) manganese superoxide dismutase [Agaricus bisporus] ---------------MAHVLPDLPYAYDALEPYISRQIMELHHKKTSS-- --DLCECAQHCRGCLRHSTAVVGGfDLSLFFILTTLGHINHSLFWQNLAP AAGAGGQLkPGPLKDAIDQTFGGLDNLKKEFNTTTAGIQGSGWGWLGVNP SNKRLEISTTPNQDP--LLNLVPIIGVDIWEHAFYLQYLNVKADYLNAIW SVINFDEAQRRYVEATQG------skl >gi|7576334|dbj|BAA94559.1|_1:152 (AB033441) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576372|dbj|BAA94561.1| (AB033443) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576422|dbj|BAA94586.1| (AB033468) iron-cofactored superoxide dismutase [Aeromonas hydrophila] ----------------------LPYAINALEPHISQETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAITKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576322|dbj|BAA94553.1|_1:152 (AB033435) iron-cofactored superoxide dismutase [Aeromonas bestiarum] ----------------------LPYAINALEPHISQETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGIFNNAAQIWNHTFYWHCLSPN --GGNEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576398|dbj|BAA94574.1|_1:152 (AB033456) iron-cofactored superoxide dismutase [Aeromonas sobria] ----------------------LPYAINALEPHISQETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSSAGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGDLAAAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|6687584|emb|CAB65011.1|_1:146 (AJ387921) superoxide dismutase [Enterococcus solitarius] --------------------------------YFDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKSVEDLMAdldsvpeDIFTAVRNNGGGHVNHSFF WKILSPD--GGGEPTGALKDAIDQEFGSFDAFKDEFKAAATGRFGSGWAW LVLD--NGKLKITSTPNQDSPLTDGQIPIIGL------------------ ----------------------------- >gi|5902904|dbj|BAA84483.1|_1:151 (AB009853) iron-containing superoxide dismutase [Edwardsiella tarda] ----------------------LPYAMNALEPHISAETLEYHYGKHHNAY VVNLNNLIKGTEFEGKSLEEI-VKSASGGIFNNAAQVWNHTFYWHCLSPN --GGGEPRGALADAINAAFGSFAAFKDALTKSAVGNFGSGWTWLVKKA-D GTLAIVNTSNAATPLTGDDKPLLTVDV----------------------- ---------------------- >gi|5902914|dbj|BAA84488.1|_1:151 (AB026682) iron-containing superoxide disumutase [Edwardsiella hoshinae] ----------------------LPYAKNALEPHISAETLEYHYGKHHNTY VVNLNNLIKGTEFEGKSLEAI-IKTASGGIFNNAAQVWNHTFYWHCLSPN --GGGEPTGALAEAINAAFGSFAAFQEALTKSAIANFGSGWTWLVKKA-D GSLAIVNTSNAATPLTGDDKPLLTVDV----------------------- ---------------------- >gi|7576414|dbj|BAA94582.1|_1:152 (AB033464) iron-cofactored superoxide dismutase [Aeromonas hydrophila] ----------------------LPYAINALEPHISQETLEYHYGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAITKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|5902906|dbj|BAA84484.1|_1:151 (AB009854) iron-containing superoxide dismutase [Edwardsiella tarda] ----------------------LPYAMNALEPHISAETLEYHYGKHHNAY VVNLNNLIKGTEFEGKSLEEI-VKSASGGIFNNAAQVWNHTFYWHCLSPN --GGGEPRGALADAINAAFGSFAAFKDALTKSAVGNFGSGWTWLVKKA-D GTLAIVNTANAATPLTGDDKPLLTVDV----------------------- ---------------------- >gi|5902916|dbj|BAA84489.1|_1:151 (AB026683) iron-containing superoxide disumutase [Edwardsiella sp. AC8635] ----------------------LPYAMNALEPHISAETLEYHYGKHHNAY VVNLNNLIKGTEFAGKSLEEI-VKSASGGIFNNAAQVWNHTFYWHCLSPN --GGGEPRGALADAINAAFGSFAAFKDALTKSAVGNFGSGWTWLVKKA-D GTLAIVNTANAATPLTGDDKPLLTVDV----------------------- ---------------------- >gi|641945|emb|CAA57154.1|_1:148 (X81391) superoxide dismutase [Mycobacterium xenopi] ----------------------------------------LHHSKHHATY VKGANDALAKLEEARAKDDHSAIVGHEKALAFNLAGHVNHCLWWKNLSPN --GGDKPTGELAAAIDDAFGSFDKFRAQFTAAATTVQGSGWAALGWDSLG GKLLVFQVYDHQSNFPLGIVPLLVLDMWEHAFYLQYKNVK---------- ----------------------a >gi|6707938|gb|AAF25727.1|AF146755_1_3:173 (AF146755) manganese-dependent superoxide dismutase [Pneumocystis carinii f. sp. suis] ke-----------------------------LEPYLSEKLLELHHNKHHR AYVTNFNLALEKYKQYESSGNLISMINLFTSIKFFLGGHINHSLFWENLL PQKEGGGKViDGPLVEAIKKEWGSVENFISIFNGELAAIQGSGWCWLVKE PLKKRLFIKTTMNQD--IITQGKVILGIDAWEHAYYAQYLNDKVRYFQNI WNVV--------------------- >gi|5902898|dbj|BAA84480.1|_1:151 (AB009850) iron-containing superoxide disumutase [Edwardsiella tarda]gi|5902900|dbj|BAA84481.1| (AB009851) iron-containing superoxide dismutase [Edwardsiella tarda]gi|5902902|dbj|BAA84482.1| (AB009852) iron-containing superoxide dismutase [Edwardsiella tarda]gi|5902910|dbj|BAA84486.1| (AB026680) iron-containing superoxide disumutase [Edwardsiella tarda] ----------------------LPYAKNALEPHISAETLEYHYGKHHNTY VVNLNNLIKGSEFEGKSLEEI-IKTSSGGIFNNAAQVWNHTFYWHCLSPN --GGGEPTGALADAINAAFGSFAAFQEALTKSAVANFGSGWTWLVKKA-D GSLAIVNTSNAATPLTGEDKPLLTVDV----------------------- ---------------------- >gi|7576316|dbj|BAA94550.1|_1:152 (AB033432) iron-cofactored superoxide dismutase [Vibrio anguillarum] ----------------------LPYAKDALEPHISAETLDFHHGKHHNTY VVKLNGLIPGTEFEGKSLEEI-IKTSTGGVFNNAAQIWNHTFYWHCLAPN --AGGEPTGAVADAINAAFGSFEAFKAKFTDSAINNFGSSWTWLVKNA-D GSLEIINTSNAATPLTHeGVTPLLTVDL---------------------- ----------------------- >gi|5902912|dbj|BAA84487.1|_1:151 (AB026681) iron-containing superoxide disumutase [Edwardsiella ictaluri] ----------------------LPYAMNALEPHISAETLEYHYGKHHNAY VVNLNNLIKGTEFEGKSLEEI-VKGSSGGIFNNAAQVWNHTFYWHCLSPN --GGGEPSGALADAISTAFGSFAAFKDALTKSAVGNFGSGWTWLVKKA-D GTLAIVNTANAATPLTGDDKPLLTVDV----------------------- ---------------------- >gi|6707930|gb|AAF25723.1|AF146751_1_1:174 (AF146751) manganese-dependent superoxide dismutase [Pneumocystis carinii f. sp. muris] ----------------------------ALEPYLSGDLIELHYNQHHRAY VTNLNKTVEKYYEENESSLDSFINrlNLLTSIKFFAGGHINHSLYWENLL PNKQGGGQIiNGPLVEAIKKEWKSVDEFIRIFNMQLAGIQGSGWAWLVKS PFSQRLSIQTTMNQDV--VTQGKVILGIDAWEHSYYIQYLNNKTKYFENI WNVV--------------------- >gi|6687505|emb|CAB64964.1|_2:146 (AJ387909) superoxide dismutase [Enterococcus columbae] t---------------------------------IDEETMHLHHEKHHNT YVTNLNAAIEKHPEFGTKTVEELVAainevpeDIRTAVRNNGGGHANHSF FWKIMSPN--GGGEPVGELKAAIEEAFGSFDEFKAQFKAAAAARFGSGWA WLVVD--NGKLAIISTANQDNPLMEGKVPVVGL----------------- ------------------------------ >gi|6707936|gb|AAF25726.1|AF146754_1_1:165 (AF146754) manganese-dependent superoxide dismutase [Pneumocystis carinii f. sp. macaca] -----------------------------------RDLLELHYNKHHRAY VTNFNLALEKYNEYDSSVDLATRMNLLTSIKFHGGGHINHSLYWESLLPP KEGGGQIfDGPLVDAIKKEWGSVDQFIRTFNTHLSGIQGSGWCWLVKIPS SRQLFIQTTMNQDL--VTQGKVILGIDAWEHAYYIQYFNNKVKYFENIWN VI--------------------- >gi|7248414|dbj|BAA92737.1|_9:238 (AP001389) Similar to Zantedeschia aethiopica iron superoxide dismutase (AF094831) [Oryza sativa] mdedaean--GDESSGTDEDASVSWIEQQPLPYPSDALEPYISKETVEQH WGVHQNIHVERLNGMIGGSEWEGMSLGQMMLSsfnegrEAPHPPFFHAAQ IWNHDFYWRSMQPG--GGGKPPERLLKFINRDFGSYDGMIRQFMDAASTQ FGSGWVWLCYKTsklphvksrspipsdNYGRLVISKSPNAINPLVWGH-- -------SHAYYLDYEDRRSDYVSTFLEkLVSWETVESRLKKAVQRAVER D-eyvstkhirkqllaraksqirampqqvngdareqtsgqekslgv >gi|2765877|emb|CAB16335.1|_1:145 (Z99191) manganese-dependent superoxide dismutase [Streptococcus mitis] --------------------------------YIDAETMHLHHDKHHQTY VNNANAALEKHPEIGEDLEALLADvesiptDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEDFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|3915015|sp|Q59949|SODM_STRPN_1:145 SUPEROXIDE DISMUTASE [MN-FE]gi|6226771|sp|O33686|SODM_STRMT SUPEROXIDE DISMUTASE [MN-FE]gi|2293050|emb|CAB09362.1| (Z95909) manganese-dependent superoxide dismutase [Streptococcus mitis]gi|2293062|emb|CAB09367.1| (Z95914) manganese-dependent superoxide dismutase [Streptococcus pneumoniae]gi|2765897|emb|CAB16345.1| (Z99201) manganese-dependent superoxide dismutase [Streptococcus pneumoniae]gi|2765899|emb|CAB16346.1| (Z99202) manganese-dependent superoxide dismutase [Streptococcus pneumoniae]gi|2765901|emb|CAB16347.1| (Z99203) manganese-dependent superoxide dismutase [Streptococcus pneumoniae]gi|2765905|emb|CAB16349.1| (Z99205) manganese-dependent superoxide dismutase [Streptococcus pneumoniae]gi|2765907|emb|CAB16350.1| (Z99206) manganese-dependent superoxide dismutase [Streptococcus pneumoniae] --------------------------------YIDAETMHLHHDKHHQTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|2293056|emb|CAB09365.1|_1:145 (Z95912) manganese-dependent superoxide dismutase [Streptococcus oralis]gi|2765883|emb|CAB16338.1| (Z99194) manganese-dependent superoxide dismutase [Streptococcus oralis] --------------------------------YIDAETMHLHHDKHHQTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTTNQDTPISEGKKPILGL------------------- ---------------------------- >gi|1075766|pir||S54795_1:145 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Streptococcus pneumoniae (fragment)gi|806591|emb|CAA89213.1| (Z49246) Superoxide Dismutase [Streptococcus pneumoniae] --------------------------------YIDAETMHLHHDKHHQTY VNNANAALEKHPEIGEDLEALLADvdlsqhDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|2765903|emb|CAB16348.1|_1:145 (Z99204) manganese-dependent superoxide dismutase [Streptococcus pneumoniae] --------------------------------YIDAETMHLHHDKHHQTY VNNANAVLEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|6687515|emb|CAB64981.1|_1:146 (AJ387926) superoxide dismutase [Enterococcus faecalis]gi|6687517|emb|CAB64982.1| (AJ387927) superoxide dismutase [Enterococcus faecalis]gi|6687519|emb|CAB64983.1| (AJ387928) superoxide dismutase [Enterococcus faecalis] --------------------------------YIDVETMHLHHDKHHNTY VTNLNAAIEKHPELGEKSVEDLISdmnaipeDIRTAVRNNGGGHANHTFF WEIMAPN--AGGQPTGAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAW LVVN--NGKLEITSTPNQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|6687588|emb|CAB65010.1|_1:146 (AJ387923) superoxide dismutase [Enterococcus seriolicida]gi|6688576|emb|CAB65174.1| (AJ387925) superoxide dismutase [Lactococcus garvieae] --------------------------------FFDEETMHLHHDKHHQTY VNNLNAAIEKHPEFFDKTVEELVAyldrlpeDIRVAVRNNGGGHLNHTMF WEWLAPN--AGGAPTGDIAAAIDEAFGSFDDFKAEFKAAATGRFGSGWAW LVLD--YGKLKVVSTANQDNPISDGQIPVLGL------------------ ----------------------------- >gi|1075699|pir||S54801_1:146 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Enterococcus faecalis (fragment)gi|806552|emb|CAA89210.1| (Z49243) superoxide dismutase [Enterococcus faecalis] --------------------------------YIDVETMHLHHDKHHNTY VTNLNAAIEKYPELGEKSVEDLISdmnaipeDIRTAVRNNGGGHANHTFF WEIMAPN--AGGQPTGAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAW LVVN--NGKLEITSTPNQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|134651|sp|P28761|SODM_BRAFL_2:144 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALgi|103687|pir||S23658 superoxide dismutase (EC 1.15.1.1) (Mn) - Florida lancelet (fragment)gi|1335607|emb|CAA45417.1| (X64061) superoxide dismutase (Mn-type) [Branchiostoma floridae] v---------------------------------ISAEIMQVHHQKHHAT YVNNLNAAEEQLAEAIHKQDVTKMIALQSAIKFNGGGHINHSIFWNNLCP S--GGGEPTGPLAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPT SKKLRIVACPNQDPLEGTtGLKPLLGIDV--------------------- ------------------------ >gi|6687570|emb|CAB64989.1|_1:146 (AJ387914) superoxide dismutase [Enterococcus flavescens] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKKVEELLAdfssvpeDIQTAVRNNGGGHANHTFF WEILGPN--AGGEPTGAIKEAIEETFGSFEDFKEEFKTAATGRFGSGWAW LVVK--DGKLAITSTANQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|6226772|sp|O54263|SODM_STROR_1:145 SUPEROXIDE DISMUTASE [MN-FE] --------------------------------YIDAETMHLHHDKHHQAY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|2765879|emb|CAB16336.1|_1:145 (Z99192) manganese-dependent superoxide dismutase [Streptococcus mitis] --------------------------------YIDAETMHLHHDKHHQTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQTAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|6687507|emb|CAB64966.1|_1:146 (AJ387910) superoxide dismutase [Enterococcus dispar] --------------------------------YIDVETMHLHHDKHHNTY VTNLNAALEKYPELAEKSVEELIAymdeipaDIRTAVQNNGGGHANHTFF WEIMAPN--AGGTPTGALKDAIDETFGSFEDFKSEFKTAATGRFGSGWAW LVVN--NGKLSIMSTANQDSPLMEGKTPIIGL------------------ ----------------------------- >gi|6687509|emb|CAB64967.1|_1:146 (AJ387911) superoxide dismutase [Enterococcus durans]gi|6687521|emb|CAB64968.1| (AJ387929) superoxide dismutase [Enterococcus durans]gi|6687523|emb|CAB64969.1| (AJ387930) superoxide dismutase [Enterococcus durans] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKYPELGEKSVEELLSdmdaiptDIKTAVQNNGGGHANHSFF WKIMAPN--AGGEPTGEIKEAIDEAFGDFATFKEEFKKAAAGRFGSGWAW LVLE--DGKLAITSTANQDSPLMTGQTPILGL------------------ ----------------------------- >gi|6687574|emb|CAB64993.1|_1:146 (AJ387916) superoxide dismutase [Enterococcus hirae]gi|6687592|emb|CAB64994.1| (AJ387932) superoxide dismutase [Enterococcus hirae]gi|6687594|emb|CAB64995.1| (AJ387933) superoxide dismutase [Enterococcus hirae] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKTIEELLSdmdavptDIKTAVRNNGGGHANHSFF WKIMAPN--AGGEPTGAIKEAIDEAFGDFATFKEEFKKAAAGRFGSGWAW LVME--NGKLAITSTANQDSPLMEGKTPILGL------------------ ----------------------------- >gi|6687572|emb|CAB64991.1|_1:146 (AJ387915) superoxide dismutase [Enterococcus gallinarum] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKSVEELLAdfdsvpeDIKTAVRNNGGGHANHSFF WEILAPN--AGGEPTGAIKEAIEETFGSFADFKEEFKTAATGRFGSGWAW LVIK--DGKLAITSTANQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|6687582|emb|CAB65009.1|_1:146 (AJ387920) superoxide dismutase [Enterococcus saccharolyticus] --------------------------------HIDVETMHLHHDKHHNTY VTNLNAAVEKYPELGEKSVEDLISdlaavpeDIRTAVRNNGGGHANHTFF WEIMAPN--AGGEPVGELKAAIDEKFGSFDAFKAEFKAAATSRFGSGWAW LALN--NGLLEVTSTPNQDSPLMDGRTPIVGL------------------ ----------------------------- >gi|6687576|emb|CAB64996.1|_1:146 (AJ387917) superoxide dismutase [Enterococcus malodoratus] --------------------------------YIDVETMHLHHDKHHNTY VTNLNAAIEKYPELAEQSVEELVTnlnevpeDIRTAVRNNGGGHANHSFF WKIMAPN--AGGKPTGAIKDAIDEAFGSFEKMKEEFKTAATGRFGSGWAW LVLN--NGKLEITSTPNQDNPLTDGKTPIIGL------------------ ----------------------------- >gi|2293054|emb|CAB09364.1|_1:145 (Z95911) manganese-dependent superoxide dismutase [Streptococcus oralis] --------------------------------YIDAETMHLHHDKHHQAY VNNANAALEKHPETGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|2765895|emb|CAB16344.1|_1:145 (Z99200) manganese-dependent superoxide dismutase [Streptococcus pneumoniae] --------------------------------YIDAETMHLHHDKHHQTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSLEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKKPILGL------------------- ---------------------------- >gi|134677|sp|P28768|SODM_PIG_1:144 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALgi|108408|pir||S23661 superoxide dismutase (EC 1.15.1.1) (Mn) - pig (fragment)gi|1364257|emb|CAA45413.1| (X64057) superoxide dismutase (Mn type) [Sus scrofa] --------------------------------HINAQIMQLHHSEHHAAY VNNLNVVEEKYQEALKKGDVTAQVALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQ GRLQIAACSNQDPLQGTtGLVPLLGIDV---------------------- ----------------------- >gi|6687527|emb|CAB64960.1|_1:146 (AJ387934) superoxide dismutase [Enterococcus casseliflavus] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKTVEELLAdfssvpeDIQTAVRNNGGGHANHTFF WEILGPN--AGGEPTGAIKEAIEETFGSFEDFKEEFKTAATGRFGSGWAW LVVK--DGKLAITSTANQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|2765857|emb|CAB16325.1|_1:145 (Z99181) manganese-dependent superoxide dismutase [Streptococcus constellatus] --------------------------------YIDEETMHLHHDKHHNTY VNNVNAALAKHPEIGEDLEQLLSDvetipaDIRQAVINNGGGHLNHALFW ELMTPE---KTEPSAALAADLEATFGSFEDFKAAFTTAATSRFGSGWAWL VVNP-DGKLEVTSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|6687501|emb|CAB64959.1|_1:146 (AJ387907) superoxide dismutase [Enterococcus casseliflavus] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKTVEELLAdfssvpeDIQTAVRNNGGGHANHTFF WEILGPN--AGGEPTGAIKEAIEETFGSFEDFKEEFKTAATGRFGSGWAW LVVK--DGKLAVTSTANQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|6687596|emb|CAB64992.1|_1:146 (AJ387940) superoxide dismutase [Enterococcus gallinarum] --------------------------------CIDEETMHLHHDKHHNTY VTNLNAAIEKHPELGEKSVEELLAdfdsvpeDIKTAVRNNGGGHANHSFF WEILAPN--AGGEPTGAIKEAIEETFGSFADFKEEFKTAATGRFGSGWAW LVIK--DGKLAITSTANQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|6687586|emb|CAB65006.1|_1:146 (AJ387922) superoxide dismutase [Enterococcus raffinosus] --------------------------------YIDVETMHLHHDKHHNTY VTNLNAAIEKYPELGEQSIEELVTnlnevpeDIRTAVRNNGGGHANHSFF WKIMAPN--AGGEPTGAIKEAIDQAFGSFEKMKEEFKTAATGRFGSGWAW LVLN--NGKLEITSTANQDSPLTDGKTPIIGL------------------ ----------------------------- >gi|6226773|sp|O33756|SODM_STRPA_1:145 SUPEROXIDE DISMUTASE [MN-FE]gi|2293060|emb|CAB09366.1| (Z95913) manganese-dependent superoxide dismutase [Streptococcus parasanguinis] --------------------------------YIDEETMHLHHDKHHQTY VNNVNAALEKHPEIGEDLESLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---QTAPSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWS VVNK-EGKLEVTSTANQDTPLSEGKTPILGL------------------- ---------------------------- >gi|2765885|emb|CAB16339.1|_1:145 (Z99195) manganese-dependent superoxide dismutase [Streptococcus oralis] --------------------------------YIDAETMHLHHDKHHQAY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWVWL VVNK-EGKLEVTSTANQDTPISESKKPILGL------------------- ---------------------------- >gi|6687533|emb|CAB64986.1|_1:146 (AJ387937) superoxide dismutase [Enterococcus faecium]gi|6687535|emb|CAB64987.1| (AJ387938) superoxide dismutase [Enterococcus faecium] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKYPELGEKTIEELLSdmdaiptDIKTAVRNNGGGHANHSFF WEIMAPN--AGGEPTGEIKEAINEAFGDFSSFKEEFKKAAAGRFGSGWAW LVME--NGKLAITSTANQDSPLMEGKTPILGL------------------ ----------------------------- >gi|2293089|emb|CAB09371.1|_1:145 (Z95918) manganese-dependent superoxide dismutase [Streptococcus sanguinis] --------------------------------YIDEETMHLHHDKHHNTY VTNVNAALEKHPEIGEDLEKLLADvgsipaDIRQAVINNGGGHLNHALFW ELMTPA---ETSPSAELAADIEATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKTPILGL------------------- ---------------------------- >gi|6687513|emb|CAB64980.1|_1:146 (AJ387913) superoxide dismutase [Enterococcus faecium]gi|6687531|emb|CAB64985.1| (AJ387936) superoxide dismutase [Enterococcus faecium] --------------------------------YIDEETMHLHHDKHHNTY VTNLNSAIEKYPELGEKTIEELLSdmdaiptDIKTAVRNNGGGHANHSFF WEIMAPN--AGGEPTGEIKEAINEAFGDFSSFKEEFKKAAAGRFGSGWAW LVME--NGKLAITSTANQDSPLMEGKTPILGL------------------ ----------------------------- >gi|2765861|emb|CAB16327.1|_1:145 (Z99183) manganese-dependent superoxide dismutase [Streptococcus constellatus] --------------------------------YIDEETMHLHHGKHHNTY VNNVNAALRKHPEIGEDLERLLADvesiptDIRQAVINNGGGHLNHALFW ELMTPE---ETAPSAELAADLEATFGSFDDFKTAFTTAATTRFGSGWAWL VVNK-EGKLEVMSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|6687499|emb|CAB64955.1|_1:146 (AJ387906) superoxide dismutase [Enterococcus avium]gi|6687539|emb|CAB64956.1| (AJ387941) superoxide dismutase [Enterococcus avium] --------------------------------YIDVETMHLHHDKHHNTY VTNLNAAIEKYPELEEQSIEELMKnlnevpeDIRTAVRNNGGGHANHSFF WKIMAPN--AGGEPTGAIKDAIDQAFGSFEKMKEEFKTAATGRFGSGWAW LVLN--NGKLEITSTANQDSPLTDGKTPIIGL------------------ ----------------------------- >gi|6687578|emb|CAB64997.1|_1:146 (AJ387918) superoxide dismutase [Enterococcus mundtii] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKYPELGGKTIEELVSdmdaipsDIQTAVRNNGGGHANHSFF WKIMAPN--AGGEPTGAIKDAINETFGDFATFKEEFKKAAAGRFGSGWAW LVLE--DGKLAITSTANQDSPLMEGKKPVLGL------------------ ----------------------------- >gi|2765863|emb|CAB16328.1|_1:145 (Z99184) manganese-dependent superoxide dismutase [Streptococcus constellatus] --------------------------------YIDEETMHLHHDKHHNTY VNNVNAALAKHPEIGEDLERLLADvetiptDIRQAVINNGGGHLNHALFW ELMTPE---ETAPSAELAADLEATFGSFDDFKTAFTTAATTRFGSGWAWL VVNK-EGKLEVMSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|2293026|emb|CAB09350.1|_1:145 (Z95897) manganese-dependent superoxide dismutase [Streptococcus constellatus]gi|2765865|emb|CAB16329.1| (Z99185) manganese-dependent superoxide dismutase [Streptococcus constellatus]gi|2765867|emb|CAB16330.1| (Z99186) manganese-dependent superoxide dismutase [Streptococcus constellatus] --------------------------------YIDEETMHLHHDKHHNTY VNNVNAALAKHPEIGEDLERLLADvesiptDIRQAVINNGGGHLNHALFW ELMTPE---ETAPSAELAADLEATFGSFDDFKTAFTTAATTRFGSGWAWL VVNK-EGKLEVMSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|2293022|emb|CAB09348.1|_1:145 (Z95895) manganese-dependent superoxide dismutase [Streptococcus anginosus] --------------------------------YIDEETMHLHHDKHHNTY VNNVNAALAKHPEIGEDLEQLLSDvetipaDIRQAVINNGGGHLNHALFW ELMTPE---KTEPSAALAADLEATFGSFEDFKAAFTTAATSRFGSGWAWL VVNN-DGKLEVTSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|6687503|emb|CAB64961.1|_2:146 (AJ387908) superoxide dismutase [Enterococcus cecorum] t---------------------------------IDEETMHLHHEKHHKT YLTNLNAALEKHPELPEKSIEDLLAginevpaDIRQAVINNGGGHANHSF FWKIMTPN--GQGAPVGELKAAIDETFGSFDEFKAQFKAAAASRFGSGWA WLVVD--NGKLAIISTANQDSPLMEGKTPVVGL----------------- ------------------------------ >gi|6687511|emb|CAB64979.1|_1:146 (AJ387912) superoxide dismutase [Enterococcus faecalis] --------------------------------YIDVETMHLHHDKHHNTY VTNLNAAIEKHPELGEKSVEDLISdmnaipeDIRTAVRNNGGGHANQTFF WEIMAPN--AGGQPTGAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAW LVVN--NGKLEITSTPNQDSPLMDGQTPVLGL------------------ ----------------------------- >gi|1711451|sp|P53649|SODM_MYCSM_1:138 SUPEROXIDE DISMUTASE [MN]gi|667043|emb|CAA88247.1| (Z48214) manganese superoxide dismutase [Mycobacterium smegmatis] -----------------------------------------HHSKHHATY VKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSPN --GGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG GRLLTFQLYDQQANVPLGIIPLLQVDMWEHA------------------- ---------------------- >gi|1075707|pir||S54789_1:146 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Enterococcus faecium (fragment)gi|806550|emb|CAA89211.1| (Z49244) superoxide dismutase [Enterococcus faecium] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKYPELGEKTVEELLSdmdavptDIKTAVRNNGGGHANHSFF WEIMAPN--AGGEPTGAIKEAINEAFGDFSSFKEEFKKAAAGRFGSGWAW LVME--NGKLAITSTANQDSPLMEGKTPILGL------------------ ----------------------------- >gi|6687537|emb|CAB64988.1|_1:146 (AJ387939) superoxide dismutase [Enterococcus faecium] --------------------------------YIDEETMHLHHDKHHNTY VTNLNSAIEKYPELGEKTIEELLSdmdaiptDIKTAVRNNGGGHANHSFF WEIMAPN--AGGEPTGEIKEAINEAFCDFSSFKEEFKKAAAGRFGSGWAW LVME--NGKLAITSTANQDSPLMEGKTPILGL------------------ ----------------------------- >gi|6687529|emb|CAB64984.1|_1:146 (AJ387935) superoxide dismutase [Enterococcus faecium] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKYPELGEKTIEELLSdmdaiptDIKTAVRNNGGGHANHSFF WEIMAPN--AGGEPTGEIKEAIKEAFGDFSSFKEEFKKAAAGRFGSGWAW LVME--NGKLAITSTANQDSPLMEGKTPILGL------------------ ----------------------------- >gi|2765859|emb|CAB16326.1|_1:145 (Z99182) manganese-dependent superoxide dismutase [Streptococcus constellatus] --------------------------------YIDEETMHLHHDKHHNTY VNNVNAALAKHPEIGEDLEQLLSDvatipaDIRQAVINNGGGHLNHALFW ELMTPE---KTEPSAALAADLEATFGSFDDFKAAFTTAAASRFGSGWAWL VVNN-DGKLEVTSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|2293032|emb|CAB09353.1|_1:145 (Z95900) manganese-dependent superoxide dismutase [Streptococcus dysgalactiae] --------------------------------HFDAETMTLHHDKHHATY VANANAALEKHPEIGENLEELLADvtkipeDIRQALINNGGGHLNHSLFW ELLSPE---KQDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWL VVNA-DGKLEITSTANQDTPISDGKTPILGL------------------- ---------------------------- >gi|6687525|emb|CAB64970.1|_1:146 (AJ387931) superoxide dismutase [Enterococcus durans] --------------------------------YIDEETMHLHHDKHHNTY VTNLNAAIEKYPKLGEKSVEELLSdmdaiptDIKTAVQNNGGGHANHSFF WKIMAPN--AGGEPTGEIKEAIDEAFGDFATFKEEFKKAAAGRFGSGWAW LVLE--DGKSAITSTANQDSPLMTGQTPILGL------------------ ----------------------------- >gi|2293028|emb|CAB09351.1|_1:145 (Z95898) manganese-dependent superoxide dismutase [Streptococcus criceti] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEELLSDvekipaDIRQALINNGGGHLNHTLFW ELLSPE---KTQITKEVAAAIEQAFGSFEAFKADFTAAATGRFGSGWAWL VVNK-EGKLEVTSTANQDTPIMDGKKPILAL------------------- ---------------------------- >gi|6687580|emb|CAB65005.1|_1:146 (AJ387919) superoxide dismutase [Enterococcus pseudoavium] --------------------------------YIDVETMHLHHDKHHNTY VTNLNVAIEKYPELAEQSVEDLVAnlnelpeDIQTAVRNNGGGHANHSFF WKIMAPN--AGGAPTGAIKDAIDEAFGGFEKMKEEFKLAATGRFGSGWAW LVWN--NGKLEITSTANQDNPLTDGKTPIIGL------------------ ----------------------------- >gi|134661|sp|P28762|SODM_EPTST_1:144 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALgi|103710|pir||S23656 superoxide dismutase (EC 1.15.1.1) (Mn) - Pacific hagfish (fragment)gi|1334629|emb|CAA45414.1| (X64058) superoxide dismutase (Mn type) [Eptatretus stouti] --------------------------------HISAEIMQLHHSKHHAAY VNNVNVVEEKLAEALGKGDVNTQVSLQPAFRFNGGGHINHSIFWRNLSPS --GGGQPCGDLLKAIENDFGSVDKLREKLVAAAVGVQGSGWAWLGFNKES KRLQIATCANQDPLQGTtGLFPLLGIDV---------------------- ----------------------- >gi|2293048|emb|CAB09361.1|_1:145 (Z95908) manganese-dependent superoxide dismutase [Streptococcus intermedius] --------------------------------YIDEETMHLHHDKHHNTY VTNVNAALAKHPEIGKDLEQLLADvesipvDIRQAVINNGGGHLNHSLFW ELMTPE---ETAPSAELAADLEATFGSFDDFKTAFTTAATIRFGSGWAWL VVNK-EGKLEVMSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|2290275|gb|AAB65095.1|_1:136 (U88710) superoxide dismutase [Burkholderia pseudomallei] ------------------------------------------HSKHHLAY VTNLNNLIPGTEFENLPLEVF-VKKSSGGIFNNAAQIWNHTFFWNSLSPN --GGGAPTGALGDAINAKWGSFDAFKEAFTKAAVGTFGSGWAWLVKKA-D GSLDIVSTSNAATPLTTADKPLVTIDVWEHAY------------------ ---------------------- >gi|4090354|gb|AAC98799.1|_1:139 (U11277) iron-superoxide dismutase [Neisseria gonorrhoeae] ----------------------------------------YHHGKHHQTY ITNLNNQIKGTEFENLPLEEI-VKKSSGGVFNNAAQTWNHTFYWLGFTPK --GQGKPAGELAAAIDAKWGSFEKFQEAFNACAAGTFGSGWAWLVKTP-V GGLDLISTSNAATPLTTENTPLLTCDVWEHAYY----------------- ---------------------- >gi|1075756|pir||S54792_1:145 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Streptococcus agalactiae (fragment)gi|806583|emb|CAA89216.1| (Z49249) superoxide dismutase [Streptococcus agalactiae]gi|2765851|emb|CAB16322.1| (Z99178) manganese-dependent superoxide dismutase [Streptococcus agalactiae] --------------------------------HIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADvsqipeDIRQAVINNGGGHLNHALFW ELMSPE---ETQISQELSEDIDATFGSFEDFKAAFTAAATGRFGSGWAWL VVNA-EGKLEVLSTANQDTPIMEGKKPILGL------------------- ---------------------------- >gi|134676|sp|P28767|SODM_PETMA_1:144 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALgi|103703|pir||S23660 superoxide dismutase (EC 1.15.1.1) (Mn) - sea lamprey (fragment)gi|1334767|emb|CAA45415.1| (X64059) superoxide dismutase (Mn type) [Petromyzon marinus] --------------------------------HISANIMQLHHSKHHATY VNNLNVAEQKLAEAVAKGDVTAEIALQPAIKFNGGGHINHSIFWTNLSPN --GGGAPTGDLQKAIETDFGSFTKLQEKMSAVSVAVQGSGWGWLGYDKET GRLRIAACANQDPLQATtGLIPLLGIDV---------------------- ----------------------- >gi|2293044|emb|CAB09359.1|_1:145 (Z95906) manganese-dependent superoxide dismutase [Streptococcus gordonii]gi|2765873|emb|CAB16333.1| (Z99189) manganese-dependent superoxide dismutase [Streptococcus gordonii]gi|2765875|emb|CAB16334.1| (Z99190) manganese-dependent superoxide dismutase [Streptococcus gordonii] --------------------------------YIDEETMHLHHDKHHNTY VTNVNAALAKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTAE---ETAPSAELVADIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVVSTANQDTPISEGKTPILGL------------------- ---------------------------- >gi|2293018|emb|CAB09346.1|_1:145 (Z95893) manganese-dependent superoxide dismutase [Streptococcus agalactiae] --------------------------------HIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADisqipeDIRQAVINNGGGHLNHALFW ELMSPE---ETQISQDLSEDIDATFGSFEDFKAAFTAAATGRFGSGWAWL VVNA-EGKLEVLSTANQDTPIMEGKKPILGL------------------- ---------------------------- >gi|2293038|emb|CAB09356.1|_1:145 (Z95903) manganese-dependent superoxide dismutase [Streptococcus equinus] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPELGDDLEVILADvdkipaDIRQAVINNGGGALNHSLFW EFLSPE---KQEPTADVLAAIEATFGSFDNFKAEFTKAATTRFGSGWAWL VVNK-EGKLEVTSTANQDNPISEGKKPILAL------------------- ---------------------------- >gi|1076035|pir||S52366_1:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium smegmatis (strain NCTC 10265) (fragment) -----------------------------------------HHSKHHATY VKGVNDAIAKLEEARANGDHAAIFLNEKNLAFHLGGHINHSIWWKNLSPN --GGDKPTGELAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG GRLLTFQLYDQQANVPLGIIPLLQVDMWEH-------------------- ---------------------- >gi|6226774|sp|O33783|SODM_STRSL_1:145 SUPEROXIDE DISMUTASE [MN-FE]gi|2293087|emb|CAB09370.1| (Z95917) manganese-dependent superoxide dismutase [Streptococcus salivarius]gi|2765889|emb|CAB16341.1| (Z99197) manganese-dependent superoxide dismutase [Streptococcus salivarius]gi|2765893|emb|CAB16343.1| (Z99199) manganese-dependent superoxide dismutase [Streptococcus salivarius] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADveqipaDIRQALINNGGGHLNHALFW ELLSPE---KQEPTAEVAAAINEAFGSFEAFQEAFTAAATTRFGSGWAWL VVND-EGKLEVVSTANQDTPISDGKKPILAL------------------- ---------------------------- >gi|2293024|emb|CAB09349.1|_1:145 (Z95896) manganese-dependent superoxide dismutase [Streptococcus bovis] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPELGDDLEVILADvdkipaDIRQAVINNGGGALNHSLFW EFLSPE---KQEPTADVLAAIEAAFGSFDNFKAEFTKAATTRFGSGWAWL VVNK-EGKLEVTSTANQDNPISEGKKPILAL------------------- ---------------------------- >gi|2293085|emb|CAB09369.1|_1:145 (Z95916) manganese-dependent superoxide dismutase [Streptococcus salivarius]gi|2765891|emb|CAB16342.1| (Z99198) manganese-dependent superoxide dismutase [Streptococcus salivarius] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADveqipaDIRQALINNGGGHLNHALFW ELLSPE---KQEPTAEVAAAINEAFGSFEAFQEAFTAAATTRFGSGWAWL VVNA-EGKLEVVSTANQDTPISDGKKPILAL------------------- ---------------------------- >gi|2765887|emb|CAB16340.1|_1:139 (Z99196) manganese-dependent superoxide dismutase [Streptococcus parasanguinis] --------------------------------------MHLHHDKHHQTY VNNVNAALEKHPEIGEDLESLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---QTAPSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPISEGKTPILGL------------------- ---------------------------- >gi|2765855|emb|CAB16324.1|_1:145 (Z99180) manganese-dependent superoxide dismutase [Streptococcus agalactiae] --------------------------------HIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADvsqipeDIRQAVINNGGGHLNHALFW ELMSPE---ETQISQELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWL VVNA-EGKLEVLSTANQDTPIMEGKKPILGL------------------- ---------------------------- >gi|2293091|emb|CAB09372.1|_1:145 (Z95919) manganese-dependent superoxide dismutase [Streptococcus sobrinus] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADvekipaDIRQALINNGGGHLNHALFW ELLSPE---KTQITKEVAEAIDGAFGSFDAFKEAFTKAATGRFGSGWAWL VVNA-DGQLEVTSTANQDTPIMEGKKPILAL------------------- ---------------------------- >gi|2293042|emb|CAB09358.1|_1:145 (Z95905) manganese-dependent superoxide dismutase [Streptococcus gordonii] --------------------------------YIDEETMHLHHDKHHNTY VTNVNAALAKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTAE---ETAPSAELAADIDATFGSFEDFQAAFTTAATTRFGSGWAWL VVNK-EGKLEVVSTANQDTPISEGKTPILGL------------------- ---------------------------- >gi|6653269|gb|AAF22650.1|AF201088_1_1:145 (AF201088) iron superoxide dismutase [Magnetospirillum magnetotacticum] ---------------------------------------EFHHGKHHAAY VTNLNNLTKDTDLASKSLEEVIKVaaadlPAKQGIFNNAAQVWNHTFFWN CLNKG--GGGKPGPKLLAKIESDLGGFDKFKEDFKAAAVGQFGSGWAWLV LD--GGKLKITKTANADLPLAHGQKALLTVDVWEHAYY------------ --------------------------- >gi|2765853|emb|CAB16323.1|_1:145 (Z99179) manganese-dependent superoxide dismutase [Streptococcus agalactiae] --------------------------------HIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADvsqipeDIAQAVINNGGGHLNHALFW ELMSPE---ETQISQELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWL VVNA-EGKLEVLSTANQDTPIMEGKKPILGL------------------- ---------------------------- >gi|2293030|emb|CAB09352.1|_1:145 (Z95899) manganese-dependent superoxide dismutase [Streptococcus downei] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLSDvekipaDIRQALINNGGGHLNHALFW ELLSPD---KPQITKEVAEAIDEAFGSFDAFKEAFTAAATGRFGSGWAWL VVNK-EGKLEVTSTANQDTPIMEDKKPILAL------------------- ---------------------------- >gi|2293052|emb|CAB09363.1|_1:145 (Z95910) manganese-dependent superoxide dismutase [Streptococcus mutans]gi|2765881|emb|CAB16337.1| (Z99193) manganese-dependent superoxide dismutase [Streptococcus mutans] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPEIGENLEVLLADveqipaDIRQSLINNGGGHLNHALFW ELLSPE---KTKVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSGWAWL VVDK-EGKLEVTSTANQDTPISQGLKPILAL------------------- ---------------------------- >gi|2293095|emb|CAB09374.1|_1:145 (Z95921) manganese-dependent superoxide dismutase [Streptococcus thermophilus] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLADvekipaDIRQALINNGGGHLNHALFW ELLSPE---KQEPTAEVAAAINEAFGSFEAFQEVFTTAATTRFGSGWAWL VVNA-EGKLEVVSTPNQDTPISDGKKPILAL------------------- ---------------------------- >gi|6226151|sp|O33605|SODM_STRAY_1:145 SUPEROXIDE DISMUTASE [MN-FE]gi|2293020|emb|CAB09347.1| (Z95894) manganese-dependent superoxide dismutase [Streptococcus alactolyticus] --------------------------------YIDKETMILHHDKHHATY LANANAALEKHPEIGEDLEFLLSDvtripeDIRQALINNGGGHLNHALFW ELLTPE---KQEPTAEVLAAIEDAFGSFEDFKTAFTQAATTRFGSGWAWL VVNQ-EGKLEVMSTGNQDNPISQGKQPILGL------------------- ---------------------------- >gi|2765869|emb|CAB16331.1|_1:145 (Z99187) manganese-dependent superoxide dismutase [Streptococcus constellatus] --------------------------------YIDEETMHLHHDKHHNTY VNNVNAALAKHPEIGEDLERLLADvesiptDIRQAVINNGGGHLNHALFW ELMTPE---ETAPSAELAADLEATFGSFDDFKIAFTTAATTRFGSGWAWL VVNK-EGKHEVMSTANQDTPISEGKTPILGI------------------- ---------------------------- >gi|2293046|emb|CAB09360.1|_1:145 (Z95907) manganese-dependent superoxide dismutase [Streptococcus gordonii]gi|2765871|emb|CAB16332.1| (Z99188) manganese-dependent superoxide dismutase [Streptococcus gordonii] --------------------------------YIDEETMHLHHDKHHNTY VTNVNVALAKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTAE---ETAPSAELAADIDATFGSFEDFQAAFTTAATTRFGSGWAWL VVNK-EGKLEVVSTANQDTPISEGKTPILGL------------------- ---------------------------- >gi|2293097|emb|CAB09375.1|_1:145 (Z95922) manganese-dependent superoxide dismutase [Streptococcus vestibularis] --------------------------------YIDAETMTLHHDKHHATY VANANAALEKYPEIGEDLEALLADvekipaDIRQALINNGGGHLNHALFW ELLSPE---KQEPTAEVVAAINEAFGSFEAFQEVFTAAATTRFGSGWAWL VVNA-EGKLEVVSTANQDTPISDGKKPILAL------------------- ---------------------------- >gi|7576410|dbj|BAA94580.1|_1:139 (AB033462) iron-cofactored superoxide dismutase [Aeromonas sobria] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSSGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576320|dbj|BAA94552.1|_1:139 (AB033434) iron-cofactored superoxide dismutase [Aeromonas allosaccharophila] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSNGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALAEAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576376|dbj|BAA94563.1|_1:139 (AB033445) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576412|dbj|BAA94581.1| (AB033463) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576424|dbj|BAA94587.1| (AB033469) iron-cofactored superoxide dismutase [Aeromonas hydrophila] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSNGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|6226152|sp|O54210|SODM_STRCB_2:145 SUPEROXIDE DISMUTASE [MN-FE]gi|2765845|emb|CAB16319.1| (Z99175) manganese-dependent superoxide dismutase [Streptococcus canis] q---------------------------------FDAETMTLHHDKHHAT YVANANAALEKHPEIGENLKELLADvtkipaDIRQALINNGGGHLNHALF WELLSPE---KQEITADVAQAIDEAFGSFDAFKEQFTAAATGRFGSGWAW LVVNK-EGQLEITSTANQDTPISEGKKPILAL------------------ ----------------------------- >gi|1711448|sp|P53647|SODM_MYCPA_1:138 SUPEROXIDE DISMUTASE [MN]gi|667039|emb|CAA88245.1| (Z48212) manganese superoxide dismutase [Mycobacterium avium subsp. paratuberculosis] -----------------------------------------HHTKHHATY VKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTVG SRLLTFQLYDQQANVPLGIIPLLQVDMWEHA------------------- ---------------------- >gi|667022|emb|CAA88242.1|_1:138 (Z48209) manganese superoxide dismutase [Mycobacterium celatum] -----------------------------------------HHSKHHATY VKGANDALEKLEEARAKDDQSTILLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLG EKLLIFQVYDHQTNFPLGVVPLLLLDMWEHA------------------- ---------------------- >gi|7576400|dbj|BAA94575.1|_1:139 (AB033457) iron-cofactored superoxide dismutase [Aeromonas trota] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSSGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAITKSFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576416|dbj|BAA94583.1|_1:139 (AB033465) iron-cofactored superoxide dismutase [Aeromonas hydrophila] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSNGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GTLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|1711441|sp|P53643|SODM_MYCCE_1:138 SUPEROXIDE DISMUTASE [MN]gi|667018|emb|CAA88248.1| (Z48215) manganese superoxide dismutase [Mycobacterium celatum] -----------------------------------------HHSKHHATY VKGANDALEKLEEARAKDDQSTVLLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLG EKLLIFQVYDHQSNFPLGVVPLLLLDMWEHA------------------- ---------------------- >gi|7576326|dbj|BAA94555.1|_1:139 (AB033437) iron-cofactored superoxide dismutase [Aeromonas encheleia] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGIFNNAAQIWNHTFYWHSLSPN --GGGEPTGALADAINKTFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|1711449|sp|P53648|SODM_MYCPH_2:138 SUPEROXIDE DISMUTASE [MN]gi|667041|emb|CAA88244.1| (Z48211) manganese superoxide dismutase [Mycobacterium phlei] s------------------------------------------HSKHHAT YVKGVNDAIAKLEEARANGDHGAIFLHEKNLAFHLGGHVNHTIWWKNLSP H--GGDKPTGDLAAAIDDQFGSFDNFRAQFTAAANGLQGSGWAVLGYDTL GDRLLTFQLYDQQANVPLGIIPLLLVDMWEHA------------------ ----------------------- >gi|7576430|dbj|BAA94590.1|_1:139 (AB033472) iron-cofactored superoxide dismutase [Aeromonas sp.] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSNGGIFNNAAQIWNHTFYWHSLSPN --GGGEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|667026|emb|CAA88251.1|_1:138 (Z48218) manganese superoxide dismutase [Mycobacterium intracellulare] -----------------------------------------HHTKHHATY VKGVNDALSKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGELAAAIDDAFGSFDRFRAQFSAAANGLQGSGWAVLGYDTLG SRLLTFQLYDQQANVPLGIIPLLQVDMWEHA------------------- ---------------------- >gi|1711446|sp|P53645|SODM_MYCMA_1:138 SUPEROXIDE DISMUTASE [MN]gi|667030|emb|CAA88243.1| (Z48210) manganese superoxide dismutase [Mycobacterium malmoense] -----------------------------------------HHSKHHAAY VKGVNDAVAKLEEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGDLASAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDSLG DKLLTFQLYDQQANVPLGIIPLLQVDMWEHA------------------- ---------------------- >gi|1075775|pir||S54794_2:145 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Streptococcus pyogenes (fragment)gi|806589|emb|CAA89214.1| (Z49247) superoxide dismutase [Streptococcus pyogenes]gi|2293040|emb|CAB09357.1| (Z95904) manganese-dependent superoxide dismutase [Streptococcus equisimilis]gi|2293064|emb|CAB09368.1| (Z95915) manganese-dependent superoxide dismutase [Streptococcus pyogenes] q---------------------------------FDAETMTLHHDKHHAT YVANTNAALEKHPEIGENLEELLADvtkipeDIRQALINNGGGHLNHALF WELLSPE---KQDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAW LVVNK-EGQLEITSTANQDTPISEGKKPILAL------------------ ----------------------------- >gi|6226150|sp|O33603|SODM_STRAI_1:145 SUPEROXIDE DISMUTASE [MN-FE]gi|2293016|emb|CAB09345.1| (Z95892) manganese-dependent superoxide dismutase [Streptococcus acidominimus] --------------------------------HIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLEALLSDvdalpaDIRQALINNGGGHLNHALFW ELLSPE---KTEISAELAADIDETFGSFDAFKEAFTTAATTRFGSGWAFL VVNP-KGKLEVISTANQDTPITQGLKPILAL------------------- ---------------------------- >gi|7576374|dbj|BAA94562.1|_1:139 (AB033444) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576420|dbj|BAA94585.1| (AB033467) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576428|dbj|BAA94589.1| (AB033471) iron-cofactored superoxide dismutase [Aeromonas sp.] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAITKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576324|dbj|BAA94554.1|_1:139 (AB033436) iron-cofactored superoxide dismutase [Aeromonas caviae]gi|7576332|dbj|BAA94558.1| (AB033440) iron-cofactored superoxide dismutase [Aeromonas hydrophila] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGVFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAITKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|2293093|emb|CAB09373.1|_1:145 (Z95920) manganese-dependent superoxide dismutase [Streptococcus suis] --------------------------------HIDAETMTLHHDKHHATY VANANAALEKHPEIGEDLVALLSDveqipsDIRQALINNGGGHLNHALFW ELLSPE---KTEISAELAADIDATFGSFDAFKEAFTAAATTRFGSGWAFL VVNK-EGKLEVISTANQDTPIMQGLKPILAL------------------- ---------------------------- >gi|7576386|dbj|BAA94568.1|_1:139 (AB033450) iron-cofactored superoxide dismutase [Aeromonas salmonicida]gi|7576388|dbj|BAA94569.1| (AB033451) iron-cofactored superoxide dismutase [Aeromonas salmonicida]gi|7576390|dbj|BAA94570.1| (AB033452) iron-cofactored superoxide dismutase [Aeromonas salmonicida]gi|7576392|dbj|BAA94571.1| (AB033453) iron-cofactored superoxide dismutase [Aeromonas salmonicida]gi|7576394|dbj|BAA94572.1| (AB033454) iron-cofactored superoxide dismutase [Aeromonas salmonicida]gi|7576406|dbj|BAA94578.1| (AB033460) iron-cofactored superoxide dismutase [Aeromonas caviae]gi|7576418|dbj|BAA94584.1| (AB033466) iron-cofactored superoxide dismutase [Aeromonas hydrophila]gi|7576434|dbj|BAA94592.1| (AB033474) iron-cofactored superoxide dismutase [Aeromonas sp.] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGIFNNAAQIWNHTFYWHCLSPN --GGNEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|7576432|dbj|BAA94591.1|_1:139 (AB033473) iron-cofactored superoxide dismutase [Aeromonas sp.] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSSAGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGDLAAAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|1711442|sp|P53644|SODM_MYCCH_2:138 SUPEROXIDE DISMUTASE [MN]gi|667020|emb|CAA88249.1| (Z48216) manganese superoxide dismutase [Mycobacterium chelonae] q------------------------------------------HSKHHAA YVAGVNSAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP N--GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSL GQKLLTFQLYDQQANVPLGIIPLLQVDMWEHA------------------ ----------------------- >gi|7576396|dbj|BAA94573.1|_1:139 (AB033455) iron-cofactored superoxide dismutase [Aeromonas schubertii] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSAGGIFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAINQAFGSFAEFKDAFTKSAIANFGSSWTWLVKKA-D GTLAIVNTSNAGCPLTEaGVTPLLTVDL---------------------- ----------------------- >gi|7576408|dbj|BAA94579.1|_1:139 (AB033461) iron-cofactored superoxide dismutase [Aeromonas hydrophila] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGIFNNAAQIWNHTFYWHCLSPN --GGNEPTGALADAINKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIANTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|4090356|gb|AAC98800.1|_1:139 (U11278) superoxide dismutase [Neisseria meningitidis] ----------------------------------------YHYGKHHQTY ITNLNNQIKGTEFENLPLEEI-VKKSSGGVFNNAAQTWNHTFYWLGFTSK --GQDKPAGELAAAIDAKWGSFEKFQEAFNACAAGTFGSGWAWLVKTP-A GGLDLVSTSNAATPLTTENTPLLTCDVWEHAYY----------------- ---------------------- >gi|1076033|pir||S52370_1:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium paratuberculosis (fragment) -----------------------------------------HHTKHHATY VKGVNDALAKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPD --GGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTVG SRLLTFQLYDQQANVPLGIIPLLQVDMWEH-------------------- ---------------------- >gi|1086009|pir||S52362_1:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium celatum (NCTC 12882) (fragment) -----------------------------------------HHSKHHATY VKGANDALEKLEEARAKDDQSTILLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLG EKLLIFQVYDHQTNFPLGVVPLLLLDMWEH-------------------- ---------------------- >gi|7576330|dbj|BAA94557.1|_1:139 (AB033439) iron-cofactored superoxide dismutase [Aeromonas eucrenophila] -----------------------------------QETLEYHHGKHHNTY VVNLNNLVPGTEFEGKSLEEI-IKTSTGGVFNNAAQIWNHTFYWHCLSPN --GGGEPTGALADAIIKAFGSFAEFKDAFTKSAIGNFGSSWTWLVKKA-D GSLAIVNTSNAGCPLTEaGTTPLLTVDL---------------------- ----------------------- >gi|1086008|pir||S52360_1:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium celatum (ATCC 51130, isolate type 2) (fragment) -----------------------------------------HHSKHHATY VKGANDALEKLEEARAKDDQSTVLLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLG EKLLIFQVYDHQSNFPLGVVPLLLLDMWEH-------------------- ---------------------- >gi|1711447|sp|P53646|SODM_MYCMR_2:138 SUPEROXIDE DISMUTASE [MN]gi|667033|emb|CAA88241.1| (Z48208) manganese superoxide dismutase [Mycobacterium marinum] s------------------------------------------HSKHHAT YVKGANDAVTKLEEARAKEDHSTILLNEKNLAFNLAGHVNHTIWWKNLSP N--GGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTL GNKLLIFQVYDHQTNFPLGIVPLLLLDMWEHA------------------ ----------------------- >gi|1076034|pir||S52379_2:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium phlei (fragment) s------------------------------------------HSKHHAT YVKGVNDAIAKLEEARANGDHGAIFLHEKNLAFHLGGHVNHTIWWKNLSP H--GGDKPTGDLAAAIDDQFGSFDNFRAQFTAAANGLQGSGWAVLGYDTL GDRLLTFQLYDQQANVPLGIIPLLLVDMWEH------------------- ----------------------- >gi|667024|emb|CAA88250.1|_2:138 (Z48217) manganese superoxide dismutase [Mycobacterium intracellulare] s------------------------------------------HSKHHAT YVKGVNDALSKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP D--GGDKPTGELAATIDDAFGSFDRFRAQFSAAANGLQGSGWAVLGYDTL GNRLLTFQLYDQQANVPLGIIPLLQVDMWEHA------------------ ----------------------- >gi|6687590|emb|CAB65012.1|_2:146 (AJ387924) superoxide dismutase [Enterococcus sulfureus] q---------------------------------IDVETMHLHHDKHHNT YVTNLNAAVEKYPELAEKSVEDLIAdmdaipsDIQTAVRNNGGGHANHSF FWEILTPN--ATEEPVGELKTAIEDTFGSLDALKEEFKKAATGRFGSGWA WLVVK--DGKLAVTSTANQDSPLIEGQTPVLGL----------------- ------------------------------ >gi|1086011|pir||S52364_1:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium malmoense (NCTC 11298) (fragment) -----------------------------------------HHSKHHAAY VKGVNDAVAKLEEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGDLASAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDSLG DKLLTFQLYDQQANVPLGIIPLLQVDMWEH-------------------- ---------------------- >gi|1086010|pir||S52361_2:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium chelonae (NCTC 0946, isolate Friedmann type) (fragment) q------------------------------------------HSKHHAA YVAGVNSAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP N--GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSL GQKLLTFQLYDQQANVPLGIIPLLQVDMWEH------------------- ----------------------- >gi|6226153|sp|O54233|SODM_STRIN_2:145 SUPEROXIDE DISMUTASE [MN-FE]gi|2765847|emb|CAB16320.1| (Z99176) manganese-dependent superoxide dismutase [Streptococcus iniae] q---------------------------------FDQETMTLHHDKHHAT YVANANAALEKHPEIGENLEELLANvesipaDIRQALINNGGGHLNHALF WELLSPE---KTEVTKEVASAIDQAFGSFDAFKEQFAAAATGRFGSGWAW LVVTK-EGSLEITSTANQDTPISEGKKPILAL------------------ ----------------------------- >gi|6226154|sp|O54266|SODM_STRPO_2:145 SUPEROXIDE DISMUTASE [MN-FE]gi|2765849|emb|CAB16321.1| (Z99177) manganese-dependent superoxide dismutase [Streptococcus porcinus] q---------------------------------FDKETMILHHDKHHAT YVANANAALEKHPEIGENLEELLADvsaipeDIRQALVNNGGGHLNHALF WELLSPE---KTEVTSDVASAIDEAFGSFESFKDAFTTAATSRFGSGWAW LVVNK-EGKLEVMSTANQDTPISEGKQPILGL------------------ ----------------------------- >gi|1086012|pir||S52365_2:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium marinum (NCTC 2275) (fragment) s------------------------------------------HSKHHAT YVKGANDAVTKLEEARAKEDHSTILLNEKNLAFNLAGHVNHTIWWKNLSP N--GGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTL GNKLLIFQVYDHQTNFPLGIVPLLLLDMWEH------------------- ----------------------- >gi|1076021|pir||S52372_2:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium intracellulare (strain BC9405/90, serotype 18) (fragment) s------------------------------------------HSKHHAT YVKGVNDALSKLEEARANEDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP D--GGDKPTGELAATIDDAFGSFDRFRAQFSAAANGLQGSGWAVLGYDTL GNRLLTFQLYDQQANVPLGIIPLLQVDMWEH------------------- ----------------------- >gi|134673|sp|P28765|SODM_PALVU_1:144 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALgi|102761|pir||S23659 superoxide dismutase (EC 1.15.1.1) (Mn) - European spiny lobster (fragment)gi|1335662|emb|CAA45419.1| (X64063) superoxide dismutase (Mn type) [Palinurus vulgaris] --------------------------------HISEMIMQIHHTKHHQAY INNLKACTEKLKQAEQANDVAAMNALLPAIKFNGGGHINHTIFWTNMAPS --AGGEPAGPVADAITKEFGSFQAFKDKFSTASVGVKGSGWGWLGYCPKN DKLAVATCQNQDPLQLThGLIPLLGLDV---------------------- ----------------------- >gi|2293036|emb|CAB09355.1|_1:145 (Z95902) manganese-dependent superoxide dismutase [Streptococcus equi] --------------------------------YFDTETMTLHHDKHHATY VANTNAALEKYPELGENLEELLADvnsipaDIRQAVINNGGGHLNHALFW ELLSPE---KQEVSADVAAAIDDAFGSFAAFKEQFAAAATGRFGSGWAWL VVNK-AGQLEITSTANQDTPISEGKQPILAL------------------- ---------------------------- >gi|2293034|emb|CAB09354.1|_1:145 (Z95901) manganese-dependent superoxide dismutase [Streptococcus equi] --------------------------------YFDTETMTLHHDKHHATY VANTNTALEKYPELGENLEELLADvssipaDIRQAVINNGGGHLNHALFW ELLSPE---KQEVSADVAAAIDDAFGSFAAFKEQFTAAATGRFGSGWAWL VVNK-AGQLEITSTANQDTPISEGKQPILAL------------------- ---------------------------- >gi|2149610|gb|AAC47548.1|_35:205 (U90722) iron superoxide dismutase A [Trypanosoma cruzi] mlrravnisiargrmalmsyatlpdllkpsgapa---------------- --ELPKLGFNWkDGCAPVFSPRQMELHYTKHHKAYVDKLN-ALAGTTYDG KSIEEIILAvandAEKKGLFNQAAQHFNHTFYFRCITPN---GKAMPKSL ESAVTAQFGSVEQFKDAFVQAGVNNFGSGWTWLCVDPsNKNQLVIDNTSN AGCPLTEGLRPVLAVDVWEHAYYKDFE----------------------- ------------tagrit >gi|8478444|sp|Q9X6W9|SODF_AQUPY_8:209 SUPEROXIDE DISMUTASE [FE]gi|4929800|gb|AAD34161.1| (AF152997) Fe-superoxide dismutase [Aquifex pyrophilus] mgvhkle-------------------------PKDHLKPqnleGISNEQI EPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQnyseyrELKVEETFN YMGVVLHELYFGMLTPG--GKGEPSEALKKKIEEDIGGLDACTNELKAAA MAF--RGWAILGLDIFSGRLVVNGLDAHNVYNLTGLIPLIVIDTYEHAYY VDYKNKRPPYIDAFFKNINWDVVNERFEKAMKAYEALK-dfik >gi|5542211|pdb|1COJ|A_7:208 Chain A, Fe-Sod From Aquifex Pyrophilus, A Hyperthermophilic Bacterium gvhkle-------------------------PKDHLKPqnleGISNEQIE PHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQnyseyrELKVEETFNY MGVVLHELYFGMLTPG--GKGEPSEALKKKIEEDIGGLDACTNELKAAAM AF--RGWAILGLDIFSGRLVVNGLDAHNVYNLTGLIPLIVIDTYEHAYYV DYKNKRPPYIDAFFKNINWDVVNERFEKAMKAYEALK-dfik >gi|6653271|gb|AAF22651.1|AF201089_1_1:140 (AF201089) iron superoxide dismutase [Magnetospirillum magnetotacticum] --------------------------------------------KHHGAY VTNLNNLTKDTDLASKSLEEVIKVaaadlPAKQGIFNNAAQVWNHTFFWN CLKKG--GGGKPGAKLLAKIEADLGGFDKFKEDFKAAAVGQFGSGWAWLV LD--GGKLKITKTANADLPLAHGQKALLTVDVWDHAYY------------ --------------------------- >gi|8478425|sp|O67470|SODF_AQUAE_8:209 SUPEROXIDE DISMUTASE [FE]gi|7433334|pir||D70430 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Aquifex aeolicusgi|2983876|gb|AAC07428.1| (AE000743) superoxide dismutase (Fe/Mn family) [Aquifex aeolicus] mgvhkiq-------------------------PKDHLKPqnleGISNEQI EPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQnyseyrELKVEETFN YMGVVLHELYFGMLAPG--GKGEPSEALKKKIEEDLGGLDACTNELKAAA IAF--RGWAILGLDIFSGRLVVNGLDAHNVYNLTGLIPLIVIDTYEHAYY VDYKNKRPPYIDAFFKNINWDVVNERFEKAMKAYEALK-dfik >gi|103414|pir||S23657_2:143 superoxide dismutase (EC 1.15.1.1) (Mn) - fruit fly (Drosophila melanogaster) (fragment)gi|1335657|emb|CAA45418.1| (X64062) superoxide dismutase (Mn type) [Drosophila melanogaster] i---------------------------------ICREIMELHHQKHHQT YVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSP N---KTQPSDDLKKAIESQWKSLEEFKKEVTTLTVAVQGSGWGWLGFNKK SGKLQLAALPNQDPLEAStGLIPLFGIDV--------------------- ------------------------ >gi|1711452|sp|P53650|SODM_MYCSZ_2:138 SUPEROXIDE DISMUTASE [MN]gi|667045|emb|CAA88246.1| (Z48213) manganese superoxide dismutase [Mycobacterium szulgai] s------------------------------------------HSKHHAT YVKGANDAVAKLEEARAQEDFSSILLSEKNLAFNLAGHVNHTIWWKNLSP N--GGDKPTGELAAAIDDAFGSFDTFSAQFHAASTTVQGSGWAALGWDTL GNKLLIFQVYDHQTNFPLGIVPLLLLDMWEHA------------------ ----------------------- >gi|1518978|gb|AAB16769.1|_1:142 (U56112) manganese-superoxide dismutase [Ganoderma australe] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAinagpLKSAIEQNWGSVDAFIKEFNATTASIQGSGWGWLG LNPATKRLEIATTANQDP--LLSLVPIIGVDVWEHAF------------- --------------------------- >gi|1086013|pir||S52376_2:137 superoxide dismutase (EC 1.15.1.1) (Mn) - Mycobacterium szulgai (NCTC 25932) (fragment) s------------------------------------------HSKHHAT YVKGANDAVAKLEEARAQEDFSSILLSEKNLAFNLAGHVNHTIWWKNLSP N--GGDKPTGELAAAIDDAFGSFDTFSAQFHAASTTVQGSGWAALGWDTL GNKLLIFQVYDHQTNFPLGIVPLLLLDMWEH------------------- ----------------------- >gi|1518998|gb|AAB16779.1|_1:142 (U56129) manganese-superoxide dismutase [Ganoderma lucidum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNAGGHINHSLFWKNLAPA KSEGKGNGGAisdgpLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLG LNPATKRLEITTTANQDP--LLSHVPIIGVDIWEHAF------------- --------------------------- >gi|1518984|gb|AAB16772.1|_1:142 (U56125) manganese-superoxide dismutase [Ganoderma capense]gi|1519004|gb|AAB16782.1| (U56127) manganese-superoxide dismutase [Ganoderma microsporum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAladgpLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLG LNPATKRLEITTTANQDP--LLSHVPIIGVDIWEHAF------------- --------------------------- >gi|1519024|gb|AAB16792.1|_1:142 (U56117) manganese-superoxide dismutase [Ganoderma tsugae]gi|1519026|gb|AAB16793.1| (U56118) manganese-superoxide dismutase [Ganoderma tsugae] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAirdgpLKSAIEQNFGSVEAFIKEFNATTASIQGSGWGWLG LNPATKRLEITTTANQDP--LLTHVPIIGVDIWEHAF------------- --------------------------- >gi|9255849|gb|AAF86329.1|_1:129 (AF271349) superoxide dismutase [Mycobacterium marinum] -------------------------------------------------- ------------EARAKEDHSTILLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLG NKLLIFQVYDHQTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDF------- ----------------------a >gi|1519022|gb|AAB16791.1|_1:142 (U56116) manganese-superoxide dismutase [Ganoderma tsugae] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAirdgpLKSAIEQNFGSVDAFIKEFNATTASIQGSGWGWLG LNPATKRLEITTTANQDP--LLTHVPIIGVDIWEHAF------------- --------------------------- >gi|1518988|gb|AAB16774.1|_1:142 (U56126) manganese-superoxide dismutase [Ganoderma fornicatum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERV---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAladgpLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLG LNPATKRLEITTTANQDP--LLSHVPIIGVDIWEHAF------------- --------------------------- >gi|1518982|gb|AAB16771.1|_1:142 (U56128) manganese-superoxide dismutase [Ganoderma boninense] ----------------------------------------LHHKKHHQAY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAisdgpLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLG LNPATKRLEITTTANQDP--LLSHVPIIGVDIWEHAF------------- --------------------------- >gi|1518976|gb|AAB16768.1|_1:142 (U56111) manganese-superoxide dismutase [Ganoderma adspersum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHTNHSLFWKNLAPA KSEGKGNGGAinagpLKSAIEQNWGSVDAFIKEFNATTASIQGSGWGWLG LNPATKRLEIATTANQDP--LLSLVPIVGVDVWEHAF------------- --------------------------- >gi|1075742|pir||S54791_1:150 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Lactococcus lactis (fragment) --------------------------------FFDEATMRLHHGKHHQTY VNNLNAAIEKHNELDDLSLEELLTdlstipeDIRTTVRNNGGGHLNHSQF WLWLRPNTDGSEnHADGEIGDAIAKEFGSFETFKTEFKAAATGCFGSGWA WLVVDE-AGKLKVVSTANQDNPISEGLTPVLGL----------------- ------------------------------ >gi|1519010|gb|AAB16785.1|_1:142 (U56123) manganese-superoxide dismutase [Ganoderma resinaceum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAisdgpLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLG LNPATKRLEITTTANQDP--LLTHAPIIGVDIWEHAF------------- --------------------------- >gi|1075676|pir||S54793_1:141 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Staphylococcus aureus (fragment)gi|806585|emb|CAA89212.1| (Z49245) superoxide dismutase [Staphylococcus aureus] --------------------------------YIDQRTMEFHHDKHHNTY VTKLNATVEGTELEHQSLADMIANldkvpeAMRMSVRNNGGGHFNHSLFW EILSPN----SEEKGGVIDDIKAQWGTLDEFKNEFANKATTLFGSGWTWL VVN--DGKLEIVTTPNQDNPLTEGKTPIL--------------------- ----------------------------lf >gi|1519006|gb|AAB16783.1|_1:142 (U56130) manganese-superoxide dismutase [Ganoderma oregonense] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIVQNWGSVDAFTKEFNATTASIQGSGWGWLG VNPTTKRLEIATTANQDP--LLSLVPIIGVDVWEHAF------------- --------------------------- >gi|1518986|gb|AAB16773.1|_1:142 (U56110) manganese-superoxide dismutase [Ganoderma formosanum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKAPTPKERI---ALQSALKFNGGGHINHSLFWKNLAPS KSEGKGNGGAikdgpLKSAIEQNWGTVDAFIKEFNASTASIQGSGWGWLG LNPTTKRLEIVTTANQDP--LLSHVPIIGVDIWEHAF------------- --------------------------- >gi|809037|emb|CAA89215.1|_1:150 (Z49248) superoxide dismutase [Lactococcus lactis] --------------------------------FFDEATMRLHHGKHHQTY VNNLNAAIEKHNELDDLSLEELLTdlsaipeDIRTAVRNNGGGHLNHSQF WLWLRPNTDGSEnHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWA WLVVDE-AGKLKVVSTANQDNPISEGLTPVLGL----------------- ------------------------------ >gi|1519028|gb|AAB16794.1|_1:142 (U56132) manganese-superoxide dismutase [Ganoderma tsugae] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIVQNWGSVDAFTEEFNATTASIQGSGWGWLG VNPTTKRLEIATTANQDP--LLSLVPIIGVDVWEHAF------------- --------------------------- >gi|1519002|gb|AAB16781.1|_1:142 (U56134) manganese-superoxide dismutase [Ganoderma lucidum]gi|1519032|gb|AAB16796.1| (U56136) manganese-superoxide dismutase [Ganoderma valesiacum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIVQNWGSVDAFTKEFNATTASIQGSGWGWLG VNPTTKRLEIATTANQDP--LLSLVPIIGVDVWEHAF------------- --------------------------- >gi|1518980|gb|AAB16770.1|_1:142 (U56137) manganese-superoxide dismutase [Ganoderma ahmadii] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIVQNWGSVDAFTKEFNATTASIQGSGWGWLG VNPTTKRLEIATTANQDP--LLSXVPIIGVDVWEHAF------------- --------------------------- >gi|1519018|gb|AAB16789.1|_1:142 (U56114) manganese-superoxide dismutase [Ganoderma tsugae] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIEQNFGSVDVFIKEFNATTASIQGSGWGWLG LNPATKRLEITTTANQDP--LLTLVPIIGVDIWEHAF------------- --------------------------- >gi|1519012|gb|AAB16786.1|_1:142 (U56106) manganese-superoxide dismutase [Ganoderma tsugae]gi|1519014|gb|AAB16787.1| (U56107) manganese-superoxide dismutase [Ganoderma tsugae] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIEQNFGSVDVFIKEFNATTASIQGSGWGWLG LNPATKRLEITTTANQDP--LLTHVPIIGVDIWEHAF------------- --------------------------- >gi|134674|sp|P28766|SODM_PARCL_2:144 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALgi|103679|pir||S23655 superoxide dismutase (EC 1.15.1.1) (Mn) - sea cucumber (Parastichopus californicus) (fragment)gi|1335713|emb|CAA45416.1| (X64060) superoxide dismutase (Mn type) [Parastichopus californicus] v---------------------------------IIGDIMELHHKKHHAT YTNNLNAAEEKLAAAHAEGDIGGMIALQPALKFNGGGFINHCIFWTNLSP Q--GGGVPEGDLADAINRDFGSFDSFKTTLTAATVAIQGSGWGWLGFDPK THHLKIATCVNQDPLQATtGMVPLFGIDV--------------------- ------------------------ >gi|1519008|gb|AAB16784.1|_1:142 (U56131) manganese-superoxide dismutase [Ganoderma oerstedii] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIVQTWGSVDAFTKEFNATTASIQGSGWGWLG VNPTTKRLEIATTANQDP--LLSLVPVIGVDVWEHAF------------- --------------------------- >gi|1519016|gb|AAB16788.1|_1:142 (U56113) manganese-superoxide dismutase [Ganoderma tropicum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKAATPKERI---ALQSALKFNGGGHINHSLFWKSLAPA KSEGKGNGGAiqdgpLKAAIVQNWGSVDAFIKEFNATTAAIQGSGWGWLG LNPTTKRLEITTTANQDP--LLTHVPIIGVDIWEHAF------------- --------------------------- >gi|1519034|gb|AAB16797.1|_1:142 (U56124) manganese-superoxide dismutase [Ganoderma weberianum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAladgpLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLG LNPATKRLEITTTANQDP--LLSHVPTIGVDIWEHAF------------- --------------------------- >gi|1518992|gb|AAB16776.1|_1:142 (U56120) manganese-superoxide dismutase [Ganoderma lucidum] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIEQNFGSVDVFIKEFNATTASIQGSGWGWLG LNPATKRLEITTTANQDP--LLTHVPXIGVDVWEHAF------------- --------------------------- >gi|1835767|gb|AAB46724.1|_1:129 (U86089) superoxide dismutase [Mycobacterium mucogenicum] -----------------------------------------HHSKHQAAY VKGVNDAVAKLEEARAGDDHAAIFLNEKNLAFHVGGHVNHSIWWKNLSPN --GGDKPTGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDSLG GRLLTFQLYDQQANVPFGIIPM---------------------------- ---------------------- >gi|1835765|gb|AAB46723.1|_1:129 (U86083) superoxide dismutase [Mycobacterium gilvum] -----------------------------------------HHSKHHAAY VAGVNTALEKLAEARANDDHGAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGELAAAIDDAFGSFDKFRAQFTAAANGLQGSGWAVLGYDTLG GKLLTFQLYDQQANVPLGIIPI---------------------------- ---------------------- >gi|1835757|gb|AAB46719.1|_1:129 (U86082) superoxide dismutase [Mycobacterium abscessus] -----------------------------------------HHSKHHASY VKGVNDAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG QKLLTFQLYDQQANVPLGIIPL---------------------------- ---------------------- >gi|1763271|gb|AAB39705.1|_1:129 (U73305) superoxide dismutase [Mycobacterium mageritense] -----------------------------------------HHSKHHAAY VKGVNDAVAKLEEARANGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDEQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG DRLLTFQLYDQQANVPLGITPL---------------------------- ---------------------- >gi|1078796|pir||S51750_1:129 superoxide dismutase (EC 1.15.1.1) (Fe) - Plasmodium falciparum (fragment)gi|607156|emb|CAA81106.1| (Z25887) superoxide dismutase [Plasmodium falciparum] ----------------------------------------------HAGY VNKLNTLIKDTPFAEKSLLDI-VKESSGAIFNNAAQIWNHTFYWDSMGPD --CGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNN-N NKLVILQTHDAGNPIKDnTGIPILTCDIW--------------------- ----------------------- >gi|1518974|gb|AAB16767.1|_1:142 (U56108) manganese-superoxide dismutase [Fomitopsis cf. rosea] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKAATPKERI---ALQAALKFNGGGHINHSLFWENLAPS KSEGKGNGGAlqdgpLKEAIIKSFGSFDNFKKEFNATAAAIQGSGWSWLG YNQATKVIEIVTTANQDP--LLLHTPIIGVDVWEHAF------------- --------------------------- >gi|1518990|gb|AAB16775.1|_1:142 (U56119) manganese-superoxide dismutase [Ganoderma lucidum] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGTikdgpLKSAIEQSFGSVDVFIKEFNATTASXQGSGWGWLG LNPATKRLEITTTANQDP--LLTHVPIMGVDIWEHAF------------- --------------------------- >gi|1835759|gb|AAB46720.1|_1:129 (U86084) superoxide dismutase [Mycobacterium aurum] -----------------------------------------HHSKHHAAY VKGLNDAIGKLEEARANDDHAAIFLNEKNLAFHLGGHVNHTIWWRNLSPN --GGDKPEGELAAAIDDQFGSFDKFRAQFTAAANGLQGSGWAVLGYDTLG DKLLTFQLYDQQANVPLGIIPL---------------------------- ---------------------- >gi|1519000|gb|AAB16780.1|_1:142 (U56133) manganese-superoxide dismutase [Ganoderma lucidum] ----------------------------------------LHXKKXXQTY VNSLNAAEQAYAKASTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIVQNWGSVDAFTKEFNATTASIQGSGWGWLG VNPTTKRLEIATTANQDP--LLSLVPVIGVDVWEHAF------------- --------------------------- >gi|1519020|gb|AAB16790.1|_1:142 (U56115) manganese-superoxide dismutase [Ganoderma tsugae] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIEQNFGSVDVFIXEFNATTASIQGSGWGWLG LNPGTKRVEITTTANQDP--LLTHVPIIGVDIWEHAF------------- --------------------------- >gi|2117672|pir||I40871_2:145 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Clostridium perfringens (fragment)gi|773204|emb|CAA88845.1| (Z49062) superoxide dismutase [Clostridium perfringens] s---------------------------------IDEETVKIHHDKHQQA YVDKLNKALEKHPELYGKSLYDILSnlddmpeDIMADLVNQGGGVYNHEF YWSILGKG---CNRPVAEIADAYDRDFGSFEEFKEKFKQCGISTFGSGWA WLVSDK-DGKLEIMSTKDQSSPISLGLIPILT------------------ ------------------------------m >gi|7674339|sp|O08459|SODM_HALHI_1:144 SUPEROXIDE DISMUTASE [MN]gi|2190594|gb|AAB60930.1| (U78906) superoxide dismutase [Haloarcula hispanica] ------------------------------------------------GY VNGLESAEETLAENRESGDFGSSAAAMGNVTHNGCGHYLHTLFWENMDPN --GGGEPEGELLDRIEEDFGSYEGWKGEFEAAASAA--GGWALLVYDPVA KQLRNVPVDKHDQGALWGSHPILALDVWEHSYYYDYGPARGDFIDA---- ---------------------- >gi|1518996|gb|AAB16778.1|_1:142 (U56122) manganese-superoxide dismutase [Ganoderma lucidum] ----------------------------------------LHHKKHHQTY VNSLNAAEQAYAKAATPKERI---ALQSALKFNGGGHINHSLFWKNLAPA ASEGKGNGGVlkdgpLKSAIEQIWGSVDTFKKEFNATTAAIQGSGWGWLG VNPTTKRLEITTTANQDP--LLTHVPVIGVDIWEHAF------------- --------------------------- >gi|1835763|gb|AAB46722.1|_1:129 (U86086) superoxide dismutase [Mycobacterium fortuitum] -----------------------------------------HHSKHQAAY VKGVKDAVAKLDEARANGDHAAIFLNEKNLAFHVGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG DRLLTFQLYDQQANVPFGIIPL---------------------------- ---------------------- >gi|1835769|gb|AAB46725.1|_1:129 (U86088) superoxide dismutase [Mycobacterium peregrinum] -----------------------------------------HHSKHQAAY VKGVKDAVAKLDEARANGDHAAIFLNEKNLAFHVGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG DRLLTFQLYDQQANVPFGIIPM---------------------------- ---------------------- >gi|6070372|dbj|BAA85576.1|_1:120 (AB021628) Manganese dependent superoxide dismutase [Streptococcus cristatus] -----------------------------------------------QTY VDNVNAALEKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDETFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6069911|dbj|BAA85496.1|_1:120 (AB021548) Manganese dependent superoxide dismutase [Streptococcus cristatus] -----------------------------------------------QTY VNNVNAALEKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDETFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070301|dbj|BAA85545.1|_1:120 (AB021597) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHTLFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|1835761|gb|AAB46721.1|_1:129 (U86085) superoxide dismutase [Mycobacterium fortuitum]gi|1835771|gb|AAB46726.1| (U86087) superoxide dismutase [Mycobacterium senegalense] -----------------------------------------HHSKHQAAY VKGVKDAVAKLDEARANGDHAAIFLNEKNLAFHVGGHVNHSIWWKNLSPN --GGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLG DRLLTFQLYDQQANVPFGITPM---------------------------- ---------------------- >gi|6070151|dbj|BAA85512.1|_1:122 (AB021564) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPD---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPITE--------------------------- ---------------------------- >gi|6070041|dbj|BAA85506.1|_1:120 (AB021558) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEVLLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070384|dbj|BAA85582.1|_1:120 (AB021634) Manganese dependent superoxide dismutase [Streptococcus parasanguinis]gi|6070388|dbj|BAA85584.1| (AB021636) Manganese dependent superoxide dismutase [Streptococcus parasanguinis] -----------------------------------------------QTY VNNVNAALEKHPEIGEDLESLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---QTAPSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070132|dbj|BAA85509.1|_1:120 (AB021561) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6070145|dbj|BAA85511.1| (AB021563) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPD---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6069924|dbj|BAA85498.1|_1:120 (AB021550) Manganese dependent superoxide dismutase [Streptococcus parasanguinis]gi|6070390|dbj|BAA85585.1| (AB021637) Manganese dependent superoxide dismutase [Streptococcus parasanguinis] -----------------------------------------------QTY VNNVNAALEKHPEIGEDLESLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---QTAPSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPL----------------------------- ----------------------------se >gi|6070185|dbj|BAA85518.1|_1:120 (AB021570) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6070382|dbj|BAA85581.1|_1:120 (AB021633) Manganese dependent superoxide dismutase [Streptococcus parasanguinis] -----------------------------------------------QTY VNNVNAALEKHPEIGEDLENLLANvesipaDIRQAVINNGGGHLNHALFW ELMTPE---QTAPSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|1518972|gb|AAB16766.1|_1:142 (U56109) manganese-superoxide dismutase [Amauroderma rude] ----------------------------------------LHHKKHHQTY VNALNAAEQAYAKAPSAKERI---ALQAALRFNGGGHINHSLFWKNLAPS KSEGKGNGGVlqdgpLKDAIVKTFGSLDNLKKEFNATTAAIQGSGWGWLG YNQTTKLLEITTTANQDP--LLSHVPIIGVDIWEHAF------------- --------------------------- >gi|1519030|gb|AAB16795.1|_1:142 (U56135) manganese-superoxide dismutase [Ganoderma tsugae] ----------------------------------------LHXKKXXQTY VNSLNAAEQAYAKATTPKERI---ALQSALKFNGGGHINHSLFWKNLAPA KSEGKGNGGAikdgpLKSAIVQNWGSVDAFTKEFNATTASIQGSGWGWLG VNPTTKRLEXATTANQDP--LLSLVPXIGVXVWEHAF------------- --------------------------- >gi|6070386|dbj|BAA85583.1|_1:120 (AB021635) Manganese dependent superoxide dismutase [Streptococcus parasanguinis] -----------------------------------------------QTY VNNVNAALEKHPEIGEDLESLLANvesipaDIRQAVINNGGGHLNHALFW ELMTPE---QTAPSAELAAAIDATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6069869|dbj|BAA85490.1|_1:120 (AB021542) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6069897|dbj|BAA85494.1| (AB021546) Manganese dependent superoxide dismutase [Streptococcus infantis]gi|6069936|dbj|BAA85500.1| (AB021552) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6069992|dbj|BAA85502.1| (AB021554) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6070001|dbj|BAA85503.1| (AB021555) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6070179|dbj|BAA85517.1| (AB021569) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6070299|dbj|BAA85544.1| (AB021596) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070317|dbj|BAA85553.1| (AB021605) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070319|dbj|BAA85554.1| (AB021606) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070321|dbj|BAA85555.1| (AB021607) Manganese dependent! superoxide dismutase [Streptococcus pneumoniae]gi|6070323|dbj|BAA85556.1| (AB021608) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070325|dbj|BAA85557.1| (AB021609) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070329|dbj|BAA85559.1| (AB021611) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6077106|dbj|BAA85492.1| (AB021544) Manganese dependent superoxide dismutase [Streptococcus pneumoniae] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070309|dbj|BAA85549.1|_1:120 (AB021601) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLETLLADvdsipaDIRQALINNGGGHLNHALFW EWMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTVAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6070313|dbj|BAA85551.1|_1:120 (AB021603) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6070311|dbj|BAA85550.1|_1:122 (AB021602) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAVLEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPITE--------------------------- ---------------------------- >gi|6077112|dbj|BAA85507.1|_1:120 (AB021559) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6077114|dbj|BAA85508.1| (AB021560) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELATAIDETFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6077108|dbj|BAA85501.1|_1:120 (AB021553) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEDFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070327|dbj|BAA85558.1|_1:120 (AB021610) Manganese dependent superoxide dismutase [Streptococcus pneumoniae] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPF----------------------------- ----------------------------se >gi|6070265|dbj|BAA85527.1|_1:120 (AB021579) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHVLFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6070204|dbj|BAA85521.1|_1:120 (AB021573) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070267|dbj|BAA85528.1| (AB021580) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070269|dbj|BAA85529.1| (AB021581) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070271|dbj|BAA85530.1| (AB021582) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070273|dbj|BAA85531.1| (AB021583) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070277|dbj|BAA85533.1| (AB021585) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070305|dbj|BAA85547.1| (AB021599) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070307|dbj|BAA85548.1| (AB021600) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070331|dbj|BAA85560.1|_1:120 (AB021612) Manganese dependent superoxide dismutase [Streptococcus pneumoniae] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELTAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6070315|dbj|BAA85552.1|_1:120 (AB021604) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QAY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6077110|dbj|BAA85505.1|_1:120 (AB021557) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLAALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070303|dbj|BAA85546.1|_1:120 (AB021598) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALDKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070008|dbj|BAA85504.1|_1:120 (AB021556) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELATAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070257|dbj|BAA85523.1|_1:120 (AB021575) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070275|dbj|BAA85532.1| (AB021584) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070285|dbj|BAA85537.1| (AB021589) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELVAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|7413493|emb|CAB85688.1|_1:124 (AJ271694) manganese superoxide dismutase [Agaricus bisporus] -------------------------------------------------- -----------------------------------------LFWQNLAPA AGAGGQLkPGPLKDAIDQTFGGLDNLKKEFNTTTAGIQGSGWGWLGVNPS NKRLEISTTPNQDP--LLNLVPIIGVDIWEHAFYLQYLNVKADYLNAIWS VINFDEAQRRYVEATQG------skl >gi|6069930|dbj|BAA85499.1|_1:120 (AB021551) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesiptDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEDFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTLTANQDTPI----------------------------- ----------------------------se >gi|6070295|dbj|BAA85542.1|_1:122 (AB021594) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANVALEKHPEIGEDLEALLTDvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPITE--------------------------- ---------------------------- >gi|6070198|dbj|BAA85520.1|_1:120 (AB021572) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070255|dbj|BAA85522.1| (AB021574) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070263|dbj|BAA85526.1| (AB021578) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQATFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070279|dbj|BAA85534.1|_1:120 (AB021586) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070360|dbj|BAA85570.1| (AB021622) Manganese dependent superoxide dismutase [Streptococcus infantis]gi|6070362|dbj|BAA85571.1| (AB021623) Manganese dependent superoxide dismutase [Streptococcus infantis] -----------------------------------------------QAY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070261|dbj|BAA85525.1|_1:120 (AB021577) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEGFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6070293|dbj|BAA85541.1|_1:120 (AB021593) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070297|dbj|BAA85543.1| (AB021595) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANVALEKHPEIGEDLEALLTDvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070168|dbj|BAA85515.1|_1:120 (AB021567) Manganese dependent superoxide dismutase [Streptococcus mitis]gi|6070174|dbj|BAA85516.1| (AB021568) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANVALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6069876|dbj|BAA85491.1|_1:120 (AB021543) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QAY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|7674341|sp|O08461|SOD1_HALME_1:144 SUPEROXIDE DISMUTASE [MN] 1gi|2190598|gb|AAB60932.1| (U78908) superoxide dismutase type I [Haloferax mediterranei] ------------------------------------------------GY VNGWNAAEETLEANREAGEFDSSAGAIRNVTHNGCGHILHDLFWQNMSPE --GGDEPAGALADRIAEDFGSYDAWKGEFEAAAGAA--GGWALLVYDSFS NQLRNVVVDKHDQGALWGSHPILALDVWEHSYYHDYGPARGDFISA---- ---------------------- >gi|6070259|dbj|BAA85524.1|_1:120 (AB021576) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAIFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070163|dbj|BAA85514.1|_1:120 (AB021566) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSVELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|1518994|gb|AAB16777.1|_1:142 (U56121) manganese-superoxide dismutase [Ganoderma lucidum] ----------------------------------------LHXKKXXQTY VNSLNAAEQAYAKAATPKERI---ALQSALKFNGGGHINHSLFWKNLAPa qsegKGNGGVLKDGPLKAAIEQIWGSVDTFKKEFNATTAAIQGSGWGWLG VNPXTKRLEITTTANQDP--LLTHVPVIGVDXWEHAF------------- --------------------------- >gi|6070138|dbj|BAA85510.1|_1:120 (AB021562) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLAALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEDFQAAFTVAATTRFGSGWAWL VVNK-EGKLEVISTANQDTPI----------------------------- ----------------------------se >gi|6070333|dbj|BAA85561.1|_1:120 (AB021613) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070335|dbj|BAA85562.1| (AB021614) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070346|dbj|BAA85563.1| (AB021615) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070350|dbj|BAA85565.1| (AB021617) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070352|dbj|BAA85566.1| (AB021618) Manganese dependent superoxide dismutase [Streptococcus pneumoniae]gi|6070354|dbj|BAA85567.1| (AB021619) Manganese dependent superoxide dismutase [Streptococcus pneumoniae] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANPDTPI----------------------------- ----------------------------se >gi|6070192|dbj|BAA85519.1|_1:120 (AB021571) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070283|dbj|BAA85536.1| (AB021588) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070289|dbj|BAA85539.1| (AB021591) Manganese dependent superoxide dismutase [Streptococcus oralis]gi|6070291|dbj|BAA85540.1| (AB021592) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLTDvdsipaDIRQALINNGGGHLNHALFW ELMTSE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070281|dbj|BAA85535.1|_1:120 (AB021587) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANVALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTATATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070356|dbj|BAA85568.1|_1:120 (AB021620) Manganese dependent superoxide dismutase [Streptococcus peroris]gi|6070358|dbj|BAA85569.1| (AB021621) Manganese dependent superoxide dismutase [Streptococcus peroris] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANPDTPI----------------------------- ----------------------------se >gi|6070157|dbj|BAA85513.1|_1:120 (AB021565) Manganese dependent superoxide dismutase [Streptococcus mitis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEDFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVISTATQDTPI----------------------------- ----------------------------se >gi|6069890|dbj|BAA85493.1|_1:120 (AB021545) Manganese dependent superoxide dismutase [Streptococcus peroris] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAINETFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANPDTPI----------------------------- ----------------------------se >gi|6070287|dbj|BAA85538.1|_1:120 (AB021590) Manganese dependent superoxide dismutase [Streptococcus oralis] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvdsipaDIRQALINNGGGHLNHALFW ELMTSE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070348|dbj|BAA85564.1|_1:120 (AB021616) Manganese dependent superoxide dismutase [Streptococcus pneumoniae] -----------------------------------------------QTY VNNANAALEKHPEIGEDLEALLADvesipaDIRQALINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANLDTPI----------------------------- ----------------------------se >gi|7674340|sp|O08460|SOD2_HALME_1:146 SUPEROXIDE DISMUTASE [MN] 2gi|2190596|gb|AAB60931.1| (U78907) superoxide dismutase type 2 [Haloferax mediterranei] ------------------------------------------------GY VNGLNAAEETLRENRSSGDMDGSAAAMRSVSHNGCGHYLHHLFWRCMTPN G-GGGEPTGDLRDRIESDFGSYEGWEAEFREAASWPAG-GWALLVYDPVT KQLRNLAVQKHNDGALWSAHPILALDVWEHSYYFQYGPDRGGFVDA---- ---------------------- >gi|6070374|dbj|BAA85577.1|_1:120 (AB021629) Manganese dependent superoxide dismutase [Streptococcus sanguinis]gi|6070376|dbj|BAA85578.1| (AB021630) Manganese dependent superoxide dismutase [Streptococcus sanguinis]gi|6070378|dbj|BAA85579.1| (AB021631) Manganese dependent superoxide dismutase [Streptococcus sanguinis] -----------------------------------------------NTY VTNVNAALEKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPA---ETSPSAELAADIEATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6070368|dbj|BAA85574.1|_1:120 (AB021626) Manganese dependent superoxide dismutase [Streptococcus cristatus] -----------------------------------------------QTY VINVNAALEKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---KTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANPDTPI----------------------------- ----------------------------se >gi|6070380|dbj|BAA85580.1|_1:120 (AB021632) Manganese dependent superoxide dismutase [Streptococcus sanguinis] -----------------------------------------------NTY VTNVNAALEKHPEIGEDLEKLLADvgsipaDIRQAVINNGGGHLNHALFW ELMTPA---ETSPSAELAADIEATFGSFEDFKAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANQDTPI----------------------------- ----------------------------se >gi|6069917|dbj|BAA85497.1|_2:120 (AB021549) Manganese dependent superoxide dismutase [Streptococcus sanguinis] y------------------------------------------------T YVTNVNAALEKHPEIGEDLEKLLADvgsipaDIRQAVINNGGGHLNHALF WELMTPA---ETSPSAELAADIEATFGSFEDFKAAFTAAATTRFGSGWAW LVVNK-EGKLEVTSTANQDTPI---------------------------- -----------------------------se >gi|531712|emb|CAA56951.1|_2:123 (X81065) superoxide dismutase [Photobacterium leiognathi] v------------------------------------------------- ---KLNGLVEGTELAEKSLEEI-IKTSTGGVFNNAAQVWNHTFYWNCLAP N--AGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAINNFGSSWTWLVKNA- DGSLAIVNTSNAGCPITEeGVTPLLTVDL--------------------- ------------------------ >gi|6069904|dbj|BAA85495.1|_1:120 (AB021547) Manganese dependent superoxide dismutase [Streptococcus gordonii]gi|6070364|dbj|BAA85572.1| (AB021624) Manganese dependent superoxide dismutase [Streptococcus gordonii]gi|6070366|dbj|BAA85573.1| (AB021625) Manganese dependent superoxide dismutase [Streptococcus gordonii] -----------------------------------------------NTY VTNVNAALAKHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTAE---ETAPSAELAADIDATFGSFEDFQAAFTTAATTRFGSGWAWL VVNK-EGKLEVVSTANQDTPI----------------------------- ----------------------------se >gi|6070370|dbj|BAA85575.1|_1:120 (AB021627) Manganese dependent superoxide dismutase [Streptococcus cristatus] -----------------------------------------------QTN VNHVNAALERHPEIGEDLEKLLADvesipaDIRQAVINNGGGHLNHALFW ELMTPE---QTAPSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWL VVNK-EGKLEVTSTANPDTPI----------------------------- ----------------------------se >gi|1669771|emb|CAA94530.1|_1:125 (Z70673) iron superoxide dismutase [Trichomonas vaginalis] -----------------------------------------------QAY IDTANKLIVGSGLEGKSIEEV-IQKAQGPLFNNVAQHFNHSFFWKCLSAE ---KVAVPAKVADALTKEFGSVEKFQETFTAKASTVFGSGWCYLYKNK-D GKCEIGQYSNAANPVKDGHKPLLTVDT----------------------- ---------------------- >gi|1669769|emb|CAA94529.1|_1:125 (Z70672) iron superoxide dismutase [Trichomonas vaginalis] -----------------------------------------------QAY IDTANKLIVGSGLEGKSIEEV-IQKAQGPLFNNVAQHFNHSFFWKCLTPE ---KVDVPSKVADVLASNFESVEKFKETFTAKASTVFGSGWCYLYKNK-D GKCEIGQYSNAANPVKDGHKPLLTVDT----------------------- ---------------------- >gi|1669773|emb|CAA94531.1|_1:125 (Z70674) iron superoxide dismutase [Trichomonas vaginalis] -----------------------------------------------QAY IDTANKLIVGSGLEGKSIEEV-IQKAQGPLFNNVAQHFNHSFFWKCLSAE ---KVAVPAKVADALTKEFGSVEKFQETFTAKASTVFGSGWCYLYKNK-E SKLEIGQYSNAANPVKDGHKPVLTVDT----------------------- ---------------------- >gi|1669765|emb|CAA94527.1|_1:125 (Z70670) iron superoxide dismutase [Trichomonas vaginalis] -----------------------------------------------QAY IDTANKLIVGSGFEGKSIEEV-IQKAQGPLFNNVAQHFNHSFFWKCLSAD ---KVAVPAKVADALTKEFGSVEKFEETFTAKASTVFGSGWCYLYKNK-E GKLEIGQYSNAANPVKDGFKPVLTVDT----------------------- ---------------------- >gi|1669767|emb|CAA94528.1|_1:125 (Z70671) iron superoxide dismutase [Trichomonas vaginalis] -----------------------------------------------QAY IDTANKLIVGSGLEGKSIEEV-IQKAQGPLFNNVAQHFNHSFFWKCLTPE ---KVDVPSKVADVLASNFESVEKFKETFTAKASTVFGSGWCYLYKNK-E SKLEIGQYSNAANPVKDGFKPVLTVDT----------------------- ---------------------- >gi|7493015|pir||T39538_22:263 probable superoxide dismutase - fission yeast (Schizosaccharomyces pombe)gi|6179675|emb|CAA16865.2| (AL021748) putative superoxide dismutase [Schizosaccharomyces pombe] mlntglrkglalspithllkrCSSVTDNVHRVNYCYNYHTVPNLSQR--N LLPLFSPEALDIAWDQHQRQVVKELNDRVKGTELEDSSVFNIIFQtaalP EHAATFQFASQAYNNHFFFQSLIGKRAADAKKNSKyeanaaINKAVNENF GSKENLLSKIHELASNSFGACWLWIVIDD-YNRLNLLRTFQAGSPYLWTR wqsndphlissvpdysarprkyahVPILNLCLWNHAYYKDYGlLNRSRYI DTWFDCIDWSVIEERL------------tnslanseqsshis >gi|1669761|emb|CAA94533.1|_1:125 (Z70676) iron superoxide dismutase [Tetratrichomonas gallinarum] -----------------------------------------------QAY IDTANKLIVGSGLEGKTMEEI-IQAASGPLFNNVAQHYNHQFFWRCLTPK ---KVEIPAKVKAVLEKEFGSVEKFKEAFQGKASTLFGSGWAYLYKSK-E GKLEIGQFSNALNPVKDGGVPILAVDT----------------------- ---------------------- >gi|7433339|pir||T10943_1:108 superoxide dismutase (EC 1.15.1.1) (Mn) precursor - sweet potato (fragment)gi|1160982|gb|AAA85342.1| (L36676) Mn-superoxide dismutase [Ipomoea batatas] -------------------------------------------------- -------------------------------------------------- ------PKSSFGWEIDNHFGSLDALIQKMSAEGAAVQGSGWVWLGLDKEL KHLVVETTPNQDPLVTKnpNKVPLLGIDVWEHAYYLQYKNVRPDYLKNIW KVVNWKYACEVYQQ----------ftplpasrd >gi|1669759|emb|CAA94526.1|_1:125 (Z70669) iron superoxide dismutase [Tritrichomonas foetus] -----------------------------------------------QGY VDMANKIVPESEFKGKSVEEI-IQNASGPVFNNVAQHFNHSFFWKCLTAT ---TQEVPAAVASFLSKHFESVDNFKAQFVQKASTVFGSGWCYLAVNK-D GSVSINQYSNALNPVKDGGVPLLCVDT----------------------- ---------------------- >gi|1669678|emb|CAA94523.1|_1:125 (Z70666) iron superoxide dismutase [Hypotrichomonas acosta] -----------------------------------------------QAY VDTANKLVPESPFNGKSIEEI-IQNAQGPIFNNVAQHFNHSFFWKCLTNT ---KQEIPAPVAAFLTKHFKSVDDFKKDFVAKASTVFGSGWCYLAANK-D GSISINQYSNAANPVKDQGFPILCVDT----------------------- ---------------------- >gi|1669755|emb|CAA94532.1|_1:125 (Z70675) iron superoxide dismutase [Trichomitus batrachorum] -----------------------------------------------QAY VDTANKIVPGTEHAGKSIEEI-IQKATGPIFNNVAQHYNHSFFWNSLSAQ ---KQEIPPGVAAFLSKHFKSVDEFKKEFVAKASTVFGSGWCYLAQNA-D KSISINQYSNAANPVKDGGFPILCVDT----------------------- ---------------------- >gi|1669757|emb|CAA94525.1|_1:125 (Z70668) iron superoxide dismutase [Tritrichomonas foetus] -----------------------------------------------QAY VDFANKNVPGTEFEGKPIEEI-IQKATGPLFNNVAQHFNHAFFWNCLTAK ---KQEVPAGVASFLAKHFESVDNFKAQFVQKASTVFGSGWCYLAQNK-D KTISINQYSNALNPVKDGGVPLLCVDT----------------------- ---------------------- >gi|7493016|pir||T40411_14:216 probable superoxide dismutase - fission yeast (Schizosaccharomyces pombe)gi|3417412|emb|CAA20300.1| (AL031261) putative superoxide dismutase [Schizosaccharomyces pombe] msfqqrfaraldv----------------------------GYKNFLSKD AVRniFAYDNHLRGLVQKECKIHQTPYRVPSDLMVQSASdPARANLFNYS SQLVNHDFFFSGLiSPERPSADADLGAinLKPGIDASFGSFGELKSQMVD VGNSVFGDGWLWLVYSPEKSLFSLLCTYNASNAFLWGTgfpkfrtnaiVP LLCVNLWQYAYLDDYGlNGKKMYITKWWDMINWTVVNNRFQATR------ --iesl >gi|1669702|emb|CAA94524.1|_1:125 (Z70667) iron superoxide dismutase [Monocercomonas sp.] -----------------------------------------------QAY VDMTNKLVPGTEFEGKTIEDI-VKTSSGPIFNNIAQHYNHSFFWDCLTAQ ---KQDIPAPVQEFLTKHFQSVDKFKTDFVAKASTVFGSGWCYLAQNA-D KSISINQYSNAANPVKDNGFPILTVDT----------------------- ---------------------- >gi|2072628|emb|CAA73188.1|_1:123 (Y12641) superoxide dismutase [Arabidopsis thaliana] -------------------------------------------------- -------------------------------------------------- --------------IERDFGSFEEFLERFKSAAASNFGSGWTWLAYKAnr ldvanavnplpkeEDKKLVIVKTPNAVNPLVWDYSPLLTIDTWEHAYYLD FENRRAEYINTFMEkLVSWETVSTRLESAIARAVQRE-qegtetedeenp ddevpevyldsdidvsevd >gi|1669676|emb|CAA94522.1|_1:125 (Z70665) iron superoxide dismutase [Hypotrichomonas acosta] -----------------------------------------------RAY VDMANKLVPESPLNGKSIEEI-IQNSTGPIFNNVAQHYNHAFFWNSLTAQ ---KQEIPPSVAAFLIKHFKSVDDFKKDFVAKASTVFGSGWCYLAANQ-D GSISINQYSNAANPVKDHGFPILTVDT----------------------- ---------------------- >gi|6226706|sp|P17550|SODM_ALCEU_1:200 PUTATIVE SUPEROXIDE DISMUTASE [MN]gi|4521953|gb|AAA21965.2| (J05278) ChrC [Ralstonia sp. CH34] ---------------MLYEMKPL-----GCEPakltGLSEKLIFSHYENN YGGAVKRLNAITATLAELDMATAPVFTLnGLKREELIATNSMILHEVYFD SLG----DGGSLDGALKTAIERDFGSVERWQAEFTAMGKAlGGGSGWVLL TYSPRDGRLVNQWASDHAH-TLAGGTPVLALDMYEHSYHMDYGAKAAAYV DAFMQNIHWQRAANLARGCRAGLTE---agtpmpnatsslelaaalhgln apqlidvrrkpafdaseqmiagaawrnp >gi|1649010|gb|AAB17668.1|_1:126 (U72871) manganese superoxide dismutase 2 [Trichoderma harzianum] -------------------------------------------------- ----------------------------------GGHANHRFFWENLAPN GKGGGgEPEGKlwydstqffcnshsssceafhllvcvnVQTAINQDFGSF ENLKKQTNAALAGIQGSGWAWIVKDKASGNLTFVTRANQD-PVTGNFEPL LGIDVWEHAYY--------------------------------------- >gi|1401274|gb|AAB03399.1|_1:89 (U59811) manganese-superoxide dismutase [Ganoderma microsporum] -------------------------------------------------- -------------------------------------------------- ------------------------FKKQMNGTTAGIQGSGWGWLGYSPET KKLEIVTTAXQDP--LLTHVPIIGIDIWEHAFYLQYYNVKADYLAAIWNV INFKEAERRLIEATK------- >gi|6322561|ref|NP_012635.1|_6:260 Yjr101wpgi|1352905|sp|P47141|YJ71_YEAST HYPOTHETICAL 30.2 KD PROTEIN IN YUH1-URA8 INTERGENIC REGIONgi|1077904|pir||S57122 hypothetical protein YJR101w - yeast (Saccharomyces cerevisiae)gi|1015806|emb|CAA89631.1| (Z49601) ORF YJR101w [Saccharomyces cerevisiae] mlvfk--------------RGIHVVPKLPNSKallqNGVPNILSSSGFKT VWFDYQRYLCDKLTLATAGQSLESYYPFHILLKtagnPLQSNIFNLASSI HNNHLFVENILPSAVEHGtnsnavvktEPSRLFLSKIKDSFNGsdWEVVK EEMIYRAENeVLGQGWLFLVENN-EKKLFILTSNNNGTPYYFPRnqsfdl nsaisidefatlkqmkeligkstklngkvqdwtMPIICVNLWDHAYLHDY GvGNRSKYVKNVLDNLNWSVVNNRI------------fsgisk >gi|42727|emb|CAA43108.1|_3:92 (X60699) sodA [Escherichia coli] ms-----------------YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQ TYVNNANAALESLPEFANLPVEELITkldqlpaDKKTVLRNNAGGHANHS LFWKGLKKG----------------------------------------- -------------------------------------------------- -------------------------------ttlq >gi|1649008|gb|AAB17667.1|_1:98 (U72870) manganese superoxide dismutase 1 [Trichoderma harzianum] -------------------------------------------------- ----------------------------------GGHANHSLFWKNLSPS SSADADPASAptLTAEIDKTWGSLDGFKEAMGKALLGLQRSGWGWFGQ-- -RRQYLANCYYKGPDPVVWRRVPILVIDVWEHAYY--------------- ------------------------ >gi|4103150|gb|AAD01691.1|_1:86 (AF021091) superoxide dismutase SodB [Helicobacter pylori] -----------------------------MGDFLSPVAFDFHHGKHHQTY VNNLNNLIKGTDFEKSSLFDI-LTKSSGGVFNNAAQIYNHDFYWDCLSPK ---ATALSDELKGALEKDF------------------------------- -------------------------------------------------- ---------------------- >gi|1263909|emb|CAA65734.1|_1:58 (X97011) superoxide dismutase [Staphylococcus epidermidis] ---------------MAFELPKLPYAYDALEPHIDKQTMEIHHDKHHNTY VTKLNSAVEGTDLEAKSIEEIVA--------------------------- -------------------------------------------------- -------------------------------------------------- ----------------------nldsvpsdiq >gi|730761|sp|P40726|SODF_SALTY_3:56 SUPEROXIDE DISMUTASE [FE]gi|600720|gb|AAA56997.1| (U09502) iron superoxide dismutase [Salmonella typhimurium] ms-----------------FELPALPYAKDALAPHISAETLEYHYGKHHQ TYVTNLNNLIKGTAFEGESLEEI--------------------------- -------------------------------------------------- -------------------------------------------------- ------------------------ >gi|6562170|emb|CAB62521.1|_40:112 (AL050388) hypothetical protein [Homo sapiens] dswlwwlrqrlqqiggisgststssmlsravcgtsrqla------PVLGY LGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKY QEALAKGRFQAERREAVP-------------------------------- -------------------------------------------------- -------------------------------------------------- -----------grgdprepgpirtglsveenslrictgsefsrhdslsfk hmvylivegvp >gi|1129044|gb|AAA83933.1|_23:75 (L34157) manganese superoxide dismutase [Homo sapiens] mlsravcgtsrqlapalgylgs--------------RQKHSLPDLPYDYG ALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAK----------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------- >gi|1084048|pir||S50999_2:49 superoxide dismutase (EC 1.15.1.1) (Fe) - Azotobacter vinelandii (fragment)gi|914026|gb|AAB32805.1| iron superoxide dismutase, Fe-SOD {N-terminal} {EC 1.15.1.1} [Azotobacter vinelandii, UW136, Peptide Partial, 49 aa] a-----------------FELPPLPYEKNALEPYISTETLEYHYGKHHNT YVVNLNNLIPGTEFWG---------------------------------- -------------------------------------------------- -------------------------------------------------- ----------------------- >gi|632260|pir||A54001_3:34 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Babesia hylomysci (fragment) ki------------------KLPPLPYSLNGLVPHISEETLQFHTNKHHN TY------------------------------------------------ -------------------------------------------------- -------------------------------------------------- ------------------------ >gi|913892|gb|AAB34099.1|_4:32 manganese superoxide dismutase, Mn-SOD {N-terminal} {EC 1.15.1.1} [Pinus sylvestris=scots pine, Peptide Mitochondrial Partial, 32 aa] iqs-----------------FSLPELPYEYSALEPVISGEIMSLHHQKH- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------------- >gi|548948|sp|P36215|SODM_RANCA_1:23 SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL ----------------KHTLPDLPYDFGALQPHISAEIM----------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---------------------- >gi|80001|pir||A24812_3:22 superoxide dismutase (EC 1.15.1.1) (Fe/Mn) - Streptococcus mutans (fragment) ai------------------TLPDLPYAYDALEPYIDAET---------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------------ >gi|1087128|gb|AAB35200.1|_4:25 manganese superoxide dismutase {N-terminal} [Solanum tuberosum=potatoes, var. Bintje, tubers, Peptide Mitochondrial Partial, 25 aa] vqt-----------------FSLPDLPYDYGALEPAISGDIM-------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------------- >gi|6094320|sp|P81527|SODF_PASPI_2:20 SUPEROXIDE DISMUTASE [FE] a-----------------FELPALPYAKDALEPHISA------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----------------------- >gi|1076811|pir||S53456_5:27 superoxide dismutase (EC 1.15.1.1) (Mn), 23K - maize (fragments) vttv------------------TLPDLSYDFGALEPAISGEIMXL----- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------------------------vxpdylnniwkvmnwk --simple mime boundary-- From farmer@cse.ucsc.edu Wed Aug 30 08:06:31 2000 Return-Path: Received: from beta.cse.ucsc.edu (beta.cse.ucsc.edu [128.114.48.15]) by cyborg.bioinfo.pl (8.9.3/8.8.7) with SMTP id IAA11182 for Message-Id: <200008300612.XAA23030@beta.cse.ucsc.edu> Subject: T0128(database hits) MIME-Version: 1.0 Content-type: multipart/mixed; Boundary="simple mime boundary" Apparently-To: T0128.target99@cafasp.bioinfo.pl --simple mime boundary Content-type: text/plain; charset=us-ascii The following are search results using the SAM-T99 method for a sequence query against a database. If there are no hits associated with this output, then your score cutoff was too conservative. Citation: K. Karplus, C. Barrett, and R. Hughey, Hidden Markov Models for Detecting Remote Protein Homologies, Bioinformatics, 1998, vol. 14, no. 10, pp. 846-856. http://www.cse.ucsc.edu/resesarch/compbio/HMM-apps -------------------------------------------------------- For questions or problems, please see the SAM-T99 FAQ at http://www.cse.ucsc.edu/research/compbio/HMM-apps/sam-t99-faq.html or email us at sam-info@cse.ucsc.edu --simple mime boundary Content-type: text/plain; charset=us-ascii Content-Disposition: attachment; filename="t99-results-967614066.t99dbhits.txt" The E-value is an estimate of approximately how many sequences would score this well by chance in the database searched. For SAM-T99, E-values less than about 0.01 are roughly equivalent, as sequences that score that well have most likely already been included in the SAM-T99 multiple alignment. Database: PDB (updated Fri Aug 25 07:54:20 2000) Score method: average Summary of Database Hits: Average Target Template SeqID Reverse EValue Reverse EValue Reverse EValue SeqLabel 1abmA -199.5 1.909e-83 -199.5 3.1e-83 --------- --------- : Chain A, Manganese Superoxide Dismutase (E.C.1.15.1.1)gi|442614|pdb|1ABM|B Chain B, Manganese Superoxide Dismutase (E.C.1.15.1.1) 1varA -198.9 3.443e-83 -198.9 8.6e-83 --------- --------- : Chain A, Mitochondrial Manganese Superoxide Dismutase Variant With Ile 58 Replaced By Thrgi|1633499|pdb|1VAR|B Chain B, Mitochondrial Manganese Superoxide Dismutase Variant With Ile 58 Replaced By Thr 1em1A -198.8 3.961e-83 -198.8 8.6e-83 --------- --------- : Chain A, X-Ray Crystal Structure For Human Manganese Superoxide Dismutase, Q143agi|7546412|pdb|1EM1|B Chain B, X-Ray Crystal Structure For Human Manganese Superoxide Dismutase, Q143a 1qnmA -198.4 5.509e-83 -198.4 8.6e-83 --------- --------- : Chain A, Human Manganese Superoxide Dismutase Mutant Q143ngi|2780819|pdb|1QNM|B Chain B, Human Manganese Superoxide Dismutase Mutant Q143n 1ap6A -197.8 1.014e-82 -197.8 2.3e-82 --------- --------- : Chain A, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutasegi|2914417|pdb|1AP6|B Chain B, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutase 3sdpA -190.5 1.61e-79 -190.5 2.5e-79 --------- --------- : Chain A, Iron Superoxide Dismutase (E.C.1.15.1.1)gi|349943|pdb|3SDP|B Chain B, Iron Superoxide Dismutase (E.C.1.15.1.1) 1bsmA -186.9 5.438e-78 -186.9 1.4e-77 --------- --------- : Chain A, P.Shermanii Sod(Fe+3) 140k Ph8gi|5542134|pdb|1BSM|B Chain B, P.Shermanii Sod(Fe+3) 140k Ph8 1idsA -181.1 1.926e-75 -181.1 2.1e-75 --------- --------- : Chain A, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod)gi|809162|pdb|1IDS|B Chain B, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod) 1iscA -179.5 8.986e-75 -193.7 1.3e-80 -165.3 1.8e-68 : Chain A, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|640119|pdb|1ISC|B Chain B, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azide 1avmA -179.4 1.055e-74 --------- --------- -179.4 1.5e-74 1mngA -177.4 7.676e-74 -191.3 9.4e-80 -163.4 1.4e-67 : Chain A, Manganese Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|640305|pdb|1MNG|B Chain B, Manganese Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azide 1d5nA -175.3 6.114e-73 -178.3 4.2e-74 -172.3 1.7e-71 : Chain A, Crystal Structure Of E. Coli Mnsod At 100kgi|7245493|pdb|1D5N|B Chain B, Crystal Structure Of E. Coli Mnsod At 100k 1qnnA -175.2 7.103e-73 -175.2 8.3e-73 --------- --------- : Chain A, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalisgi|9257064|pdb|1QNN|B Chain B, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalis 1sssA -172.9 6.944e-72 -172.9 1.7e-71 --------- --------- : Chain A, Iron Superoxide Dismutase (Fe-Sod) From The Hyperthermophile Sulfolobus Solfataricus. 2.3 A Resolution Structure Of Recombinant Protein With A Covalently Modified Tyrosin In The Active Site.gi|4930137|pdb|1SSS|B Chain B, Iron Superoxide Dismutase (Fe-Sod) From The Hyperthermophile Sulfolobus Solfataricus. 2.3 A Resolution Structure Of Recombinant Protein With A Covalently Modified Tyrosin In The Active Site 1b06A -170.3 8.718e-71 -170.3 1.2e-70 --------- --------- : Chain A, Superoxide Dismutase From Sulfolobus Acidocaldariusgi|6573495|pdb|1B06|B Chain B, Superoxide Dismutase From Sulfolobus Acidocaldarius 1cojA -149.8 7.114e-62 -126.1 1.6e-51 -173.6 6.2e-72 : Chain A, Fe-Sod From Aquifex Pyrophilus, A Hyperthermophilic Bacterium 1nulA -9.09 0.9434 --------- --------- -9.09 1 1cgo -8.17 2.367 --------- --------- -8.17 2.8 3gpdG -7.01 7.545 -7.01 7.6 --------- --------- : Chain G, D-Glyceraldehyde-3-Phosphate Dehydrogenase (E.C.1.2.1.12)gi|230867|pdb|3GPD|R Chain R, D-Glyceraldehyde-3-Phosphate Dehydrogenase (E.C.1.2.1.12) 1dd8A -6.73 9.98 --------- --------- -6.73 21 --simple mime boundary Content-type: text/plain; charset=us-ascii; name='t99-results-967614066.t99pairwise.a2m' Content-Disposition: attachment; filename="t99-results-967614066.t99pairwise.a2m" >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1abmA Chain A, Manganese Superoxide Dismutase (E.C.1.15.1.1)gi|442614|pdb|1ABM|B Chain B, Manganese Superoxide Dismutase (E.C.1.15.1.1) ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAY VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1varA Chain A, Mitochondrial Manganese Superoxide Dismutase Variant With Ile 58 Replaced By Thrgi|1633499|pdb|1VAR|B Chain B, Mitochondrial Manganese Superoxide Dismutase Variant With Ile 58 Replaced By Thr x-----------------HSLPDLPYDYGALEPHINAQIMQLHHSKHHAA YVNNLNVTEEKYQEALAKGDVTAQTALQPALKFNGGGHINHSIFWTNLSP N--GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKE RGHLQIAACPNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW NVINWENVTERYMACKK------- >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1em1A Chain A, X-Ray Crystal Structure For Human Manganese Superoxide Dismutase, Q143agi|7546412|pdb|1EM1|B Chain B, X-Ray Crystal Structure For Human Manganese Superoxide Dismutase, Q143a ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAY VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNADPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1qnmA Chain A, Human Manganese Superoxide Dismutase Mutant Q143ngi|2780819|pdb|1QNM|B Chain B, Human Manganese Superoxide Dismutase Mutant Q143n ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAY VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNNDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1ap6A Chain A, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutasegi|2914417|pdb|1AP6|B Chain B, Tyr34->phe Mutant Of Human Mitochondrial Manganese Superoxide Dismutase ----------------KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAF VNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPN --GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKER GHLQIAACPNQDPLQGTtGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN VINWENVTERYMACKK------- >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >3sdpA Chain A, Iron Superoxide Dismutase (E.C.1.15.1.1)gi|349943|pdb|3SDP|B Chain B, Iron Superoxide Dismutase (E.C.1.15.1.1) ----------------AFELPPLPYAHDALQPHISKETLEYHHDKHHNTY VVNLNNLVPGTPEFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSPD --AGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWAWLVKA--D GSLALCSTIGAGAPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWNL VNWAFVAE--------------egktfka >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1bsmA Chain A, P.Shermanii Sod(Fe+3) 140k Ph8gi|5542134|pdb|1BSM|B Chain B, P.Shermanii Sod(Fe+3) 140k Ph8 a----------------VYTLPELPYDYSALEPYISGEIMELHHDKHHKA YVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAP KGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPL GKRINTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWN VVNWDDVALRFSEAR--------va >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1idsA Chain A, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod)gi|809162|pdb|1IDS|B Chain B, Iron-Dependent Superoxide Dismutase (E.C.1.15.1.1) (Fe-Superoxide Dismutase, Fe-Sod) --------------MAEYTLPDLDWDYGALEPHISGQINELHHSKHHATY VKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSPN --GGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLG NKLLIFQVYDHQTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV VNWADVQSRYAAATSQTKGL--ifg >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1iscA Chain A, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|640119|pdb|1ISC|B Chain B, Iron(Iii) Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azide s-----------------FELPALPYAKDALAPHISAETIEYHYGKHHQT YVTNLNNLIKGTAFEGKSLEEI-IRSSEGGVFNNAAQVWNHTFYWNCLAP N--AGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNS- DGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWA LVNWEFVAKNLAA---------- >T0128 mrgshhhhhhgsvttKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGqialkl >1avmA AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEAR DKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAPKGSAPERPTDELGAAI DEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDHQNNL PAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEARV A >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1mngA Chain A, Manganese Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azidegi|640305|pdb|1MNG|B Chain B, Manganese Superoxide Dismutase (E.C.1.15.1.1) Complexed With Azide p---------------YPFKLPDLGYPYEALEPHIDAKTMEIHHQKHHGA YVTNLNAALEKYPYLHGVEVEVLLRhlaalpqDIQTAVRNNGGGHLNHSL FWRLLTPG--GAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWA WLVKDP-FGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRAD YLQAIWNVLNWDVAEEFFKKA--------- >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1d5nA Chain A, Crystal Structure Of E. Coli Mnsod At 100kgi|7245493|pdb|1D5N|B Chain B, Crystal Structure Of E. Coli Mnsod At 100k s-----------------YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQT YVNNANAALESLPEFANLPVEELITkldqlpaDKKTVLRNNAGGHANHSL FWKGLK----KGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWA WLVLK--GDKLAVVSTANQDSPLMGEAisgasgFPIMGLDVWEHAYYLKF QNRRPDYIKEFWNVVNWDEAAARFAA----------kk >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1qnnA Chain A, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalisgi|9257064|pdb|1QNN|B Chain B, Cambialistic Superoxide Dismutase From Porphyromonas Gingivalis ---------------MTHELISLPYAVDALAPVISKETVEFHHGKHLKTY VDNLNKLIIGTEFENADLNTI-VQKSEGGIFNNAGQTLNHNLYFTQFRPG --KGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDA-N GKLSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLWSI VDWDIVESRY------------ >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1sssA Chain A, Iron Superoxide Dismutase (Fe-Sod) From The Hyperthermophile Sulfolobus Solfataricus. 2.3 A Resolution Structure Of Recombinant Protein With A Covalently Modified Tyrosin In The Active Site.gi|4930137|pdb|1SSS|B Chain B, Iron Superoxide Dismutase (Fe-Sod) From The Hyperthermophile Sulfolobus Solfataricus. 2.3 A Resolution Structure Of Recombinant Protein With A Covalently Modified Tyrosin In The Active Site ------------IQFKKYELPPLPYKIDALEPYISKDIIDVHYNGHHKGY VNGANSLLERLEKVVKGDLQTGQYdiqGIIRGLTFNINGHKLHALYWENM APSGKGGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYD TESGNLQIMTFENHFQNHIAEIPIILILDEFEHAYYLQYKNKRADYVNAW WNVVNWDAAEKKLQKYL-------- >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >1b06A Chain A, Superoxide Dismutase From Sulfolobus Acidocaldariusgi|6573495|pdb|1B06|B Chain B, Superoxide Dismutase From Sulfolobus Acidocaldarius tqv------------IQLKRYEFPQLPYKVDALEPYISKDIIDVHYNGHH KGYVNGANSLLDRLEKLIKGDLPQGQYdlqGILRGLTFNINGHKLHAIYW NNMAPAGKGGGKPGGALADLIDKQYGSFDRFKQVFSESANSLPGSGWTVL YYDNESGNLQIMTVENHFMNHIAELPVILIVDEFEHAYYLQYKNKRGDYL NAWWNVVNWDDAEKRLQKYL--------nk >T0128 mrgshhhhhhgsvttkr-YTLPPLPYAYNALEPYISAEIMQLHHQKHHQG YVNGANAALEKLEKF------RKGEAQIDIRAVLRDLSFHLNGHILHSIF WPNMAPpgKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAknVEGVGWAI LVYEPLEEQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSY VDNWWNVVNWDDVERRLQKALNGQIALK----l >1cojA Chain A, Fe-Sod From Aquifex Pyrophilus, A Hyperthermophilic Bacterium gVHKLEPKDHLKPQNLEGISNEQIEPHFEAHYKGYVAKYNEIQEKLADQN FADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLTPGGKGEPSEAL KKKIEEDIGGLDACTNELKAAAMAFRGWAILGLDIFSGRLVVNGLDAHNV YNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEKA MKAYEALKDFIK >T0128 mrgshhhhhhgsvttkrytlpplpyaynalepyisaeimqlhhqkhhqgy vnganaaleklekfrkgEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINK-FFGSFEKFkeefsqaaknvegvgwailvyepl eeqllilQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSyvdnWWN VVNWDDVERRLQKALNGQIALKL--------------------- >1nulA msEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLAREL GIRHVDTVCISSydhdnqreLKVLKRAEGDGEGFIVIDDLVDTGGTAVAI REMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPIS GR >T0128 mrgshhhhhhgsvttkrytlpplpyaynalepyisaeimqlhhq------ ---KHHQGYVNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHlngHILHS IFWPNMAPPGKGggkpggkiADLINKFFGSFEKFKEEFSQAAKNVEGV-- ------------------------------gwailvyepleeqllilqie khnlmhaadaqvllaldvwehayylqykndrgsyvdnwwnvvnwddverr lqkalngqialkl >1cgo Cytochrome C' x-FAKPEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLK TLTALPWAAFGPGTEGGDARPEIWSDAASFKQKQQAFQDNIVKLSAAADA GDLDKLRAAFGDVGASCKACHDAYR-kkk >T0128 MRGSHHHHHHGSVTTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGY VNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPP GKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLE EQLLILQIEKHNLMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNV VNWDDVERRLQKALNGQIALKL >3gpdG Chain G, D-Glyceraldehyde-3-Phosphate Dehydrogenase (E.C.1.2.1.12)gi|230867|pdb|3GPD|R Chain R, D-Glyceraldehyde-3-Phosphate Dehydrogenase (E.C.1.2.1.12) gkvkvgvdgfgrigrlvtraafnsgkvdivaindpfidlhymvymfqyds thgkfhgtvkaedgklvidgkaitifqerdpenikwgdagtayvvestgv fttmekagahlkggakrivisapsadapmfvmgvnhfkyanslkiisnas cttncla------------------------------------------- -------------------------------------------------- ----------------PLAKVIHDHFGIVEGLMTTVHAITATQ------- -------------------------------------------------- -----------------------------ktvdspsgklwrggrgaaqnl ipastgaakavgkvipeldgkltgmafrvptanvsvldltcrlekpakyd dikkvvkeasegplkgilgytedevvsddfngsnhssifdagagielndt fvklvswydnefgyservvdlmahmaske >T0128 ----------------------------------------MRGSHHHHHH GSV---------TTKRYTLPPLPYAYNALEPYISAEIMQLHHQKHhq--- --------------------------------------GYVNGANAALEK LEKFR------------------------------------------KGE AQIDIRAVLR-----------------------------------DLSFH LNGHILHSIFWPNMAPPGKGGGKPGG-KIADLINKFFGSFEKfkeEFSQA AKNVEGVGWAILVYEPLEEQLLILQIEKHNLMHAADAQVLLALDVWEHAY YLqyKNDRGSYVDNWWNVVNWDDVER-----------RLQKAL------- --NGQIALKL--- >1dd8A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coligi|6573502|pdb|1DD8|B Chain B, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli MKRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWG NVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVG LIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF KIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARG AHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGT STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLML EHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLV MRKLKD --simple mime boundary Content-type: text/plain; charset=us-ascii; name='t99-results-967614066.t99pairwise.casp.al' Content-Disposition: attachment; filename="t99-results-967614066.t99pairwise.casp.al" PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1abm_A R 17 K 1 Y 18 H 2 T 19 S 3 L 20 L 4 P 21 P 5 P 22 D 6 L 23 L 7 P 24 P 8 Y 25 Y 9 A 26 D 10 Y 27 Y 11 N 28 G 12 A 29 A 13 L 30 L 14 E 31 E 15 P 32 P 16 Y 33 H 17 I 34 I 18 S 35 N 19 A 36 A 20 E 37 Q 21 I 38 I 22 M 39 M 23 Q 40 Q 24 L 41 L 25 H 42 H 26 H 43 H 27 Q 44 S 28 K 45 K 29 H 46 H 30 H 47 H 31 Q 48 A 32 G 49 A 33 Y 50 Y 34 V 51 V 35 N 52 N 36 G 53 N 37 A 54 L 38 N 55 N 39 A 56 V 40 A 57 T 41 L 58 E 42 E 59 E 43 K 60 K 44 L 61 Y 45 E 62 Q 46 K 63 E 47 F 64 A 48 R 65 L 49 K 66 A 50 G 67 K 51 E 68 G 52 A 69 D 53 Q 70 V 54 I 71 T 55 D 72 A 56 I 73 Q 57 R 74 I 58 A 75 A 59 V 76 L 60 L 77 Q 61 R 78 P 62 D 79 A 63 L 80 L 64 S 81 K 65 F 82 F 66 H 83 N 67 L 84 G 68 N 85 G 69 G 86 G 70 H 87 H 71 I 88 I 72 L 89 N 73 H 90 H 74 S 91 S 75 I 92 I 76 F 93 F 77 W 94 W 78 P 95 T 79 N 96 N 80 M 97 L 81 A 98 S 82 P 99 P 83 P 100 N 84 G 103 G 85 G 104 G 86 G 105 G 87 K 106 E 88 P 107 P 89 G 108 K 90 G 109 G 91 K 110 E 92 I 111 L 93 A 112 L 94 D 113 E 95 L 114 A 96 I 115 I 97 N 116 K 98 K 117 R 99 F 118 D 100 F 119 F 101 G 120 G 102 S 121 S 103 F 122 F 104 E 123 D 105 K 124 K 106 F 125 F 107 K 126 K 108 E 127 E 109 E 128 K 110 F 129 L 111 S 130 T 112 Q 131 A 113 A 132 A 114 A 133 S 115 K 134 V 116 N 135 G 117 V 136 V 118 E 137 Q 119 G 138 G 120 V 139 S 121 G 140 G 122 W 141 W 123 A 142 G 124 I 143 W 125 L 144 L 126 V 145 G 127 Y 146 F 128 E 147 N 129 P 148 K 130 L 149 E 131 E 150 R 132 E 151 G 133 Q 152 H 134 L 153 L 135 L 154 Q 136 I 155 I 137 L 156 A 138 Q 157 A 139 I 158 C 140 E 159 P 141 K 160 N 142 H 161 Q 143 N 162 D 144 L 163 P 145 M 164 L 146 H 165 Q 147 A 166 G 148 A 167 T 149 D 168 G 151 A 169 L 152 Q 170 I 153 V 171 P 154 L 172 L 155 L 173 L 156 A 174 G 157 L 175 I 158 D 176 D 159 V 177 V 160 W 178 W 161 E 179 E 162 H 180 H 163 A 181 A 164 Y 182 Y 165 Y 183 Y 166 L 184 L 167 Q 185 Q 168 Y 186 Y 169 K 187 K 170 N 188 N 171 D 189 V 172 R 190 R 173 G 191 P 174 S 192 D 175 Y 193 Y 176 V 194 L 177 D 195 K 178 N 196 A 179 W 197 I 180 W 198 W 181 N 199 N 182 V 200 V 183 V 201 I 184 N 202 N 185 W 203 W 186 D 204 E 187 D 205 N 188 V 206 V 189 E 207 T 190 R 208 E 191 R 209 R 192 L 210 Y 193 Q 211 M 194 K 212 A 195 A 213 C 196 L 214 K 197 N 215 K 198 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. Model FIM_method_score geometric mean of match probabilities (6). % Single Track Model: /tmp/1varA.1varA.mod MODEL 1 PARENT 1var_A Y 18 H 3 T 19 S 4 L 20 L 5 P 21 P 6 P 22 D 7 L 23 L 8 P 24 P 9 Y 25 Y 10 A 26 D 11 Y 27 Y 12 N 28 G 13 A 29 A 14 L 30 L 15 E 31 E 16 P 32 P 17 Y 33 H 18 I 34 I 19 S 35 N 20 A 36 A 21 E 37 Q 22 I 38 I 23 M 39 M 24 Q 40 Q 25 L 41 L 26 H 42 H 27 H 43 H 28 Q 44 S 29 K 45 K 30 H 46 H 31 H 47 H 32 Q 48 A 33 G 49 A 34 Y 50 Y 35 V 51 V 36 N 52 N 37 G 53 N 38 A 54 L 39 N 55 N 40 A 56 V 41 A 57 T 42 L 58 E 43 E 59 E 44 K 60 K 45 L 61 Y 46 E 62 Q 47 K 63 E 48 F 64 A 49 R 65 L 50 K 66 A 51 G 67 K 52 E 68 G 53 A 69 D 54 Q 70 V 55 I 71 T 56 D 72 A 57 I 73 Q 58 R 74 T 59 A 75 A 60 V 76 L 61 L 77 Q 62 R 78 P 63 D 79 A 64 L 80 L 65 S 81 K 66 F 82 F 67 H 83 N 68 L 84 G 69 N 85 G 70 G 86 G 71 H 87 H 72 I 88 I 73 L 89 N 74 H 90 H 75 S 91 S 76 I 92 I 77 F 93 F 78 W 94 W 79 P 95 T 80 N 96 N 81 M 97 L 82 A 98 S 83 P 99 P 84 P 100 N 85 G 103 G 86 G 104 G 87 G 105 G 88 K 106 E 89 P 107 P 90 G 108 K 91 G 109 G 92 K 110 E 93 I 111 L 94 A 112 L 95 D 113 E 96 L 114 A 97 I 115 I 98 N 116 K 99 K 117 R 100 F 118 D 101 F 119 F 102 G 120 G 103 S 121 S 104 F 122 F 105 E 123 D 106 K 124 K 107 F 125 F 108 K 126 K 109 E 127 E 110 E 128 K 111 F 129 L 112 S 130 T 113 Q 131 A 114 A 132 A 115 A 133 S 116 K 134 V 117 N 135 G 118 V 136 V 119 E 137 Q 120 G 138 G 121 V 139 S 122 G 140 G 123 W 141 W 124 A 142 G 125 I 143 W 126 L 144 L 127 V 145 G 128 Y 146 F 129 E 147 N 130 P 148 K 131 L 149 E 132 E 150 R 133 E 151 G 134 Q 152 H 135 L 153 L 136 L 154 Q 137 I 155 I 138 L 156 A 139 Q 157 A 140 I 158 C 141 E 159 P 142 K 160 N 143 H 161 Q 144 N 162 D 145 L 163 P 146 M 164 L 147 H 165 Q 148 A 166 G 149 A 167 T 150 D 168 G 152 A 169 L 153 Q 170 I 154 V 171 P 155 L 172 L 156 L 173 L 157 A 174 G 158 L 175 I 159 D 176 D 160 V 177 V 161 W 178 W 162 E 179 E 163 H 180 H 164 A 181 A 165 Y 182 Y 166 Y 183 Y 167 L 184 L 168 Q 185 Q 169 Y 186 Y 170 K 187 K 171 N 188 N 172 D 189 V 173 R 190 R 174 G 191 P 175 S 192 D 176 Y 193 Y 177 V 194 L 178 D 195 K 179 N 196 A 180 W 197 I 181 W 198 W 182 N 199 N 183 V 200 V 184 V 201 I 185 N 202 N 186 W 203 W 187 D 204 E 188 D 205 N 189 V 206 V 190 E 207 T 191 R 208 E 192 R 209 R 193 L 210 Y 194 Q 211 M 195 K 212 A 196 A 213 C 197 L 214 K 198 N 215 K (null) TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1em1_A R 17 K 1 Y 18 H 2 T 19 S 3 L 20 L 4 P 21 P 5 P 22 D 6 L 23 L 7 P 24 P 8 Y 25 Y 9 A 26 D 10 Y 27 Y 11 N 28 G 12 A 29 A 13 L 30 L 14 E 31 E 15 P 32 P 16 Y 33 H 17 I 34 I 18 S 35 N 19 A 36 A 20 E 37 Q 21 I 38 I 22 M 39 M 23 Q 40 Q 24 L 41 L 25 H 42 H 26 H 43 H 27 Q 44 S 28 K 45 K 29 H 46 H 30 H 47 H 31 Q 48 A 32 G 49 A 33 Y 50 Y 34 V 51 V 35 N 52 N 36 G 53 N 37 A 54 L 38 N 55 N 39 A 56 V 40 A 57 T 41 L 58 E 42 E 59 E 43 K 60 K 44 L 61 Y 45 E 62 Q 46 K 63 E 47 F 64 A 48 R 65 L 49 K 66 A 50 G 67 K 51 E 68 G 52 A 69 D 53 Q 70 V 54 I 71 T 55 D 72 A 56 I 73 Q 57 R 74 I 58 A 75 A 59 V 76 L 60 L 77 Q 61 R 78 P 62 D 79 A 63 L 80 L 64 S 81 K 65 F 82 F 66 H 83 N 67 L 84 G 68 N 85 G 69 G 86 G 70 H 87 H 71 I 88 I 72 L 89 N 73 H 90 H 74 S 91 S 75 I 92 I 76 F 93 F 77 W 94 W 78 P 95 T 79 N 96 N 80 M 97 L 81 A 98 S 82 P 99 P 83 P 100 N 84 G 103 G 85 G 104 G 86 G 105 G 87 K 106 E 88 P 107 P 89 G 108 K 90 G 109 G 91 K 110 E 92 I 111 L 93 A 112 L 94 D 113 E 95 L 114 A 96 I 115 I 97 N 116 K 98 K 117 R 99 F 118 D 100 F 119 F 101 G 120 G 102 S 121 S 103 F 122 F 104 E 123 D 105 K 124 K 106 F 125 F 107 K 126 K 108 E 127 E 109 E 128 K 110 F 129 L 111 S 130 T 112 Q 131 A 113 A 132 A 114 A 133 S 115 K 134 V 116 N 135 G 117 V 136 V 118 E 137 Q 119 G 138 G 120 V 139 S 121 G 140 G 122 W 141 W 123 A 142 G 124 I 143 W 125 L 144 L 126 V 145 G 127 Y 146 F 128 E 147 N 129 P 148 K 130 L 149 E 131 E 150 R 132 E 151 G 133 Q 152 H 134 L 153 L 135 L 154 Q 136 I 155 I 137 L 156 A 138 Q 157 A 139 I 158 C 140 E 159 P 141 K 160 N 142 H 161 A 143 N 162 D 144 L 163 P 145 M 164 L 146 H 165 Q 147 A 166 G 148 A 167 T 149 D 168 G 151 A 169 L 152 Q 170 I 153 V 171 P 154 L 172 L 155 L 173 L 156 A 174 G 157 L 175 I 158 D 176 D 159 V 177 V 160 W 178 W 161 E 179 E 162 H 180 H 163 A 181 A 164 Y 182 Y 165 Y 183 Y 166 L 184 L 167 Q 185 Q 168 Y 186 Y 169 K 187 K 170 N 188 N 171 D 189 V 172 R 190 R 173 G 191 P 174 S 192 D 175 Y 193 Y 176 V 194 L 177 D 195 K 178 N 196 A 179 W 197 I 180 W 198 W 181 N 199 N 182 V 200 V 183 V 201 I 184 N 202 N 185 W 203 W 186 D 204 E 187 D 205 N 188 V 206 V 189 E 207 T 190 R 208 E 191 R 209 R 192 L 210 Y 193 Q 211 M 194 K 212 A 195 A 213 C 196 L 214 K 197 N 215 K 198 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1qnm_A R 17 K 1 Y 18 H 2 T 19 S 3 L 20 L 4 P 21 P 5 P 22 D 6 L 23 L 7 P 24 P 8 Y 25 Y 9 A 26 D 10 Y 27 Y 11 N 28 G 12 A 29 A 13 L 30 L 14 E 31 E 15 P 32 P 16 Y 33 H 17 I 34 I 18 S 35 N 19 A 36 A 20 E 37 Q 21 I 38 I 22 M 39 M 23 Q 40 Q 24 L 41 L 25 H 42 H 26 H 43 H 27 Q 44 S 28 K 45 K 29 H 46 H 30 H 47 H 31 Q 48 A 32 G 49 A 33 Y 50 Y 34 V 51 V 35 N 52 N 36 G 53 N 37 A 54 L 38 N 55 N 39 A 56 V 40 A 57 T 41 L 58 E 42 E 59 E 43 K 60 K 44 L 61 Y 45 E 62 Q 46 K 63 E 47 F 64 A 48 R 65 L 49 K 66 A 50 G 67 K 51 E 68 G 52 A 69 D 53 Q 70 V 54 I 71 T 55 D 72 A 56 I 73 Q 57 R 74 I 58 A 75 A 59 V 76 L 60 L 77 Q 61 R 78 P 62 D 79 A 63 L 80 L 64 S 81 K 65 F 82 F 66 H 83 N 67 L 84 G 68 N 85 G 69 G 86 G 70 H 87 H 71 I 88 I 72 L 89 N 73 H 90 H 74 S 91 S 75 I 92 I 76 F 93 F 77 W 94 W 78 P 95 T 79 N 96 N 80 M 97 L 81 A 98 S 82 P 99 P 83 P 100 N 84 G 103 G 85 G 104 G 86 G 105 G 87 K 106 E 88 P 107 P 89 G 108 K 90 G 109 G 91 K 110 E 92 I 111 L 93 A 112 L 94 D 113 E 95 L 114 A 96 I 115 I 97 N 116 K 98 K 117 R 99 F 118 D 100 F 119 F 101 G 120 G 102 S 121 S 103 F 122 F 104 E 123 D 105 K 124 K 106 F 125 F 107 K 126 K 108 E 127 E 109 E 128 K 110 F 129 L 111 S 130 T 112 Q 131 A 113 A 132 A 114 A 133 S 115 K 134 V 116 N 135 G 117 V 136 V 118 E 137 Q 119 G 138 G 120 V 139 S 121 G 140 G 122 W 141 W 123 A 142 G 124 I 143 W 125 L 144 L 126 V 145 G 127 Y 146 F 128 E 147 N 129 P 148 K 130 L 149 E 131 E 150 R 132 E 151 G 133 Q 152 H 134 L 153 L 135 L 154 Q 136 I 155 I 137 L 156 A 138 Q 157 A 139 I 158 C 140 E 159 P 141 K 160 N 142 H 161 N 143 N 162 D 144 L 163 P 145 M 164 L 146 H 165 Q 147 A 166 G 148 A 167 T 149 D 168 G 151 A 169 L 152 Q 170 I 153 V 171 P 154 L 172 L 155 L 173 L 156 A 174 G 157 L 175 I 158 D 176 D 159 V 177 V 160 W 178 W 161 E 179 E 162 H 180 H 163 A 181 A 164 Y 182 Y 165 Y 183 Y 166 L 184 L 167 Q 185 Q 168 Y 186 Y 169 K 187 K 170 N 188 N 171 D 189 V 172 R 190 R 173 G 191 P 174 S 192 D 175 Y 193 Y 176 V 194 L 177 D 195 K 178 N 196 A 179 W 197 I 180 W 198 W 181 N 199 N 182 V 200 V 183 V 201 I 184 N 202 N 185 W 203 W 186 D 204 E 187 D 205 N 188 V 206 V 189 E 207 T 190 R 208 E 191 R 209 R 192 L 210 Y 193 Q 211 M 194 K 212 A 195 A 213 C 196 L 214 K 197 N 215 K 198 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1ap6_A R 17 K 1 Y 18 H 2 T 19 S 3 L 20 L 4 P 21 P 5 P 22 D 6 L 23 L 7 P 24 P 8 Y 25 Y 9 A 26 D 10 Y 27 Y 11 N 28 G 12 A 29 A 13 L 30 L 14 E 31 E 15 P 32 P 16 Y 33 H 17 I 34 I 18 S 35 N 19 A 36 A 20 E 37 Q 21 I 38 I 22 M 39 M 23 Q 40 Q 24 L 41 L 25 H 42 H 26 H 43 H 27 Q 44 S 28 K 45 K 29 H 46 H 30 H 47 H 31 Q 48 A 32 G 49 A 33 Y 50 F 34 V 51 V 35 N 52 N 36 G 53 N 37 A 54 L 38 N 55 N 39 A 56 V 40 A 57 T 41 L 58 E 42 E 59 E 43 K 60 K 44 L 61 Y 45 E 62 Q 46 K 63 E 47 F 64 A 48 R 65 L 49 K 66 A 50 G 67 K 51 E 68 G 52 A 69 D 53 Q 70 V 54 I 71 T 55 D 72 A 56 I 73 Q 57 R 74 I 58 A 75 A 59 V 76 L 60 L 77 Q 61 R 78 P 62 D 79 A 63 L 80 L 64 S 81 K 65 F 82 F 66 H 83 N 67 L 84 G 68 N 85 G 69 G 86 G 70 H 87 H 71 I 88 I 72 L 89 N 73 H 90 H 74 S 91 S 75 I 92 I 76 F 93 F 77 W 94 W 78 P 95 T 79 N 96 N 80 M 97 L 81 A 98 S 82 P 99 P 83 P 100 N 84 G 103 G 85 G 104 G 86 G 105 G 87 K 106 E 88 P 107 P 89 G 108 K 90 G 109 G 91 K 110 E 92 I 111 L 93 A 112 L 94 D 113 E 95 L 114 A 96 I 115 I 97 N 116 K 98 K 117 R 99 F 118 D 100 F 119 F 101 G 120 G 102 S 121 S 103 F 122 F 104 E 123 D 105 K 124 K 106 F 125 F 107 K 126 K 108 E 127 E 109 E 128 K 110 F 129 L 111 S 130 T 112 Q 131 A 113 A 132 A 114 A 133 S 115 K 134 V 116 N 135 G 117 V 136 V 118 E 137 Q 119 G 138 G 120 V 139 S 121 G 140 G 122 W 141 W 123 A 142 G 124 I 143 W 125 L 144 L 126 V 145 G 127 Y 146 F 128 E 147 N 129 P 148 K 130 L 149 E 131 E 150 R 132 E 151 G 133 Q 152 H 134 L 153 L 135 L 154 Q 136 I 155 I 137 L 156 A 138 Q 157 A 139 I 158 C 140 E 159 P 141 K 160 N 142 H 161 Q 143 N 162 D 144 L 163 P 145 M 164 L 146 H 165 Q 147 A 166 G 148 A 167 T 149 D 168 G 151 A 169 L 152 Q 170 I 153 V 171 P 154 L 172 L 155 L 173 L 156 A 174 G 157 L 175 I 158 D 176 D 159 V 177 V 160 W 178 W 161 E 179 E 162 H 180 H 163 A 181 A 164 Y 182 Y 165 Y 183 Y 166 L 184 L 167 Q 185 Q 168 Y 186 Y 169 K 187 K 170 N 188 N 171 D 189 V 172 R 190 R 173 G 191 P 174 S 192 D 175 Y 193 Y 176 V 194 L 177 D 195 K 178 N 196 A 179 W 197 I 180 W 198 W 181 N 199 N 182 V 200 V 183 V 201 I 184 N 202 N 185 W 203 W 186 D 204 E 187 D 205 N 188 V 206 V 189 E 207 T 190 R 208 E 191 R 209 R 192 L 210 Y 193 Q 211 M 194 K 212 A 195 A 213 C 196 L 214 K 197 N 215 K 198 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 3sdp_A R 17 A _ Y 18 F _ T 19 E _ L 20 L _ P 21 P 5 P 22 P 6 L 23 L 7 P 24 P 8 Y 25 Y 9 A 26 A 10 Y 27 H 11 N 28 D 12 A 29 A 13 L 30 L 14 E 31 Q 15 P 32 P 16 Y 33 H 17 I 34 I 18 S 35 S 19 A 36 K 20 E 37 E 21 I 38 T 22 M 39 L 23 Q 40 E 24 L 41 Y 25 H 42 H 26 H 43 H 27 Q 44 D 28 K 45 K 29 H 46 H 30 H 47 H 31 Q 48 N 32 G 49 T 33 Y 50 Y 34 V 51 V 35 N 52 V 36 G 53 N 37 A 54 L 38 N 55 N 39 A 56 N 40 A 57 L 41 L 58 V 42 E 59 P 43 K 60 G 44 L 61 T 45 E 62 P 46 K 63 E 47 F 64 F 48 R 65 E 49 K 66 G 50 G 67 K 51 E 68 T 52 A 69 L 53 Q 70 E 54 I 71 E 55 D 72 I 56 I 73 V 57 R 74 K 58 A 75 S 59 V 76 S 60 L 77 S 61 R 78 G 62 D 79 G 63 L 80 I 64 S 81 F 65 F 82 N 66 H 83 N 67 L 84 A 68 N 85 A 69 G 86 Q 70 H 87 V 71 I 88 W 72 L 89 N 73 H 90 H 74 S 91 T 75 I 92 F 76 F 93 Y 77 W 94 W 78 P 95 N 79 N 96 C 80 M 97 L 81 A 98 S 82 P 99 P 83 P 100 D 84 G 103 A 85 G 104 G 86 G 105 G 87 K 106 Q 88 P 107 P 89 G 108 T 90 G 109 G 91 K 110 A 92 I 111 L 93 A 112 A 94 D 113 D 95 L 114 A 96 I 115 I 97 N 116 N 98 K 117 A 99 F 118 A 100 F 119 F 101 G 120 G 102 S 121 S 103 F 122 F 104 E 123 D 105 K 124 K 106 F 125 F 107 K 126 K 108 E 127 E 109 E 128 E 110 F 129 F 111 S 130 T 112 Q 131 K 113 A 132 T 114 A 133 S 115 K 134 V 116 N 135 G 117 V 136 T 118 E 137 F 119 G 138 G 120 V 139 S 121 G 140 G 122 W 141 W 123 A 142 A 124 I 143 W 125 L 144 L 126 V 145 V 127 Y 146 K 128 E 147 A 129 E 150 D 130 E 151 G 131 Q 152 S 132 L 153 L 133 L 154 A 134 I 155 L 135 L 156 C 136 Q 157 S 137 I 158 T 138 E 159 I 139 K 160 G 140 H 161 A 141 N 162 G 142 L 163 A 143 M 164 P 144 H 165 L 145 A 166 T 146 A 167 S 147 D 168 G 148 A 169 D 149 Q 170 T 150 V 171 P 151 L 172 L 152 L 173 L 153 A 174 T 154 L 175 C 155 D 176 D 156 V 177 V 157 W 178 W 158 E 179 E 159 H 180 H 160 A 181 A 161 Y 182 Y 162 Y 183 Y 163 L 184 I 164 Q 185 D 165 Y 186 Y 166 K 187 R 167 N 188 N 168 D 189 L 169 R 190 R 170 G 191 P 171 S 192 K 172 Y 193 Y 173 V 194 V 174 D 195 E 175 N 196 A 176 W 197 F 177 W 198 W 178 N 199 N 179 V 200 L 180 V 201 V 181 N 202 N 182 W 203 W 183 D 204 A 184 D 205 F 185 V 206 V 186 E 207 A 187 R 208 E 188 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1bsm_A R 17 V 2 Y 18 Y 3 T 19 T 4 L 20 L 5 P 21 P 6 P 22 E 7 L 23 L 8 P 24 P 9 Y 25 Y 10 A 26 D 11 Y 27 Y 12 N 28 S 13 A 29 A 14 L 30 L 15 E 31 E 16 P 32 P 17 Y 33 Y 18 I 34 I 19 S 35 S 20 A 36 G 21 E 37 E 22 I 38 I 23 M 39 M 24 Q 40 E 25 L 41 L 26 H 42 H 27 H 43 H 28 Q 44 D 29 K 45 K 30 H 46 H 31 H 47 H 32 Q 48 K 33 G 49 A 34 Y 50 Y 35 V 51 V 36 N 52 D 37 G 53 G 38 A 54 A 39 N 55 N 40 A 56 T 41 A 57 A 42 L 58 L 43 E 59 D 44 K 60 K 45 L 61 L 46 E 62 A 47 K 63 E 48 F 64 A 49 R 65 R 50 K 66 D 51 G 67 K 52 E 68 A 53 A 69 D 54 Q 70 F 55 I 71 G 56 D 72 A 57 I 73 I 58 R 74 N 59 A 75 K 60 V 76 L 61 L 77 E 62 R 78 K 63 D 79 D 64 L 80 L 65 S 81 A 66 F 82 F 67 H 83 N 68 L 84 L 69 N 85 A 70 G 86 G 71 H 87 H 72 I 88 V 73 L 89 N 74 H 90 H 75 S 91 S 76 I 92 V 77 F 93 F 78 W 94 W 79 P 95 K 80 N 96 N 81 M 97 M 82 A 98 A 83 P 99 P 84 P 100 K 85 G 101 G 86 K 102 S 87 G 103 A 88 G 104 P 89 G 105 E 90 K 106 R 91 P 107 P 92 G 108 T 93 G 109 D 94 K 110 E 95 I 111 L 96 A 112 G 97 D 113 A 98 L 114 A 99 I 115 I 100 N 116 D 101 K 117 E 102 F 118 F 103 F 119 F 104 G 120 G 105 S 121 S 106 F 122 F 107 E 123 D 108 K 124 N 109 F 125 M 110 K 126 K 111 E 127 A 112 E 128 Q 113 F 129 F 114 S 130 T 115 Q 131 A 116 A 132 A 117 A 133 A 118 K 134 T 119 N 135 G 120 V 136 I 121 E 137 Q 122 G 138 G 123 V 139 S 124 G 140 G 125 W 141 W 126 A 142 A 127 I 143 S 128 L 144 L 129 V 145 V 130 Y 146 W 131 E 147 D 132 P 148 P 133 L 149 L 134 E 150 G 135 E 151 K 136 Q 152 R 137 L 153 I 138 L 154 N 139 I 155 T 140 L 156 L 141 Q 157 Q 142 I 158 F 143 E 159 Y 144 K 160 D 145 H 161 H 146 N 162 Q 147 L 163 N 148 M 164 N 149 H 165 L 150 A 166 P 151 A 167 A 152 D 168 G 153 A 169 S 154 Q 170 I 155 V 171 P 156 L 172 L 157 L 173 L 158 A 174 Q 159 L 175 L 160 D 176 D 161 V 177 M 162 W 178 W 163 E 179 E 164 H 180 H 165 A 181 A 166 Y 182 F 167 Y 183 Y 168 L 184 L 169 Q 185 Q 170 Y 186 Y 171 K 187 K 172 N 188 N 173 D 189 V 174 R 190 K 175 G 191 G 176 S 192 D 177 Y 193 Y 178 V 194 V 179 D 195 K 180 N 196 S 181 W 197 W 182 W 198 W 183 N 199 N 184 V 200 V 185 V 201 V 186 N 202 N 187 W 203 W 188 D 204 D 189 D 205 D 190 V 206 V 191 E 207 A 192 R 208 L 193 R 209 R 194 L 210 F 195 Q 211 S 196 K 212 E 197 A 213 A 198 L 214 R 199 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1ids_A T 15 M _ K 16 A 2 R 17 E 3 Y 18 Y 4 T 19 T 5 L 20 L 6 P 21 P 7 P 22 D 8 L 23 L 9 P 24 D 10 Y 25 W 11 A 26 D 12 Y 27 Y 13 N 28 G 14 A 29 A 15 L 30 L 16 E 31 E 17 P 32 P 18 Y 33 H 19 I 34 I 20 S 35 S 21 A 36 G 22 E 37 Q 23 I 38 I 24 M 39 N 25 Q 40 E 26 L 41 L 27 H 42 H 28 H 43 H 29 Q 44 S 30 K 45 K 31 H 46 H 32 H 47 H 33 Q 48 A 34 G 49 T 35 Y 50 Y 36 V 51 V 37 N 52 K 38 G 53 G 39 A 54 A 40 N 55 N 41 A 56 D 42 A 57 A 43 L 58 V 44 E 59 A 45 K 60 K 46 L 61 L 47 E 62 E 48 K 63 E 49 F 64 A 50 R 65 R 51 K 66 A 52 G 67 K 53 E 68 E 54 A 69 D 55 Q 70 H 56 I 71 S 57 D 72 A 58 I 73 I 59 R 74 L 60 A 75 L 61 V 76 N 62 L 77 E 63 R 78 K 64 D 79 N 65 L 80 L 66 S 81 A 67 F 82 F 68 H 83 N 69 L 84 L 70 N 85 A 71 G 86 G 72 H 87 H 73 I 88 V 74 L 89 N 75 H 90 H 76 S 91 T 77 I 92 I 78 F 93 W 79 W 94 W 80 P 95 K 81 N 96 N 82 M 97 L 83 A 98 S 84 P 99 P 85 P 100 N 86 G 103 G 87 G 104 G 88 G 105 D 89 K 106 K 90 P 107 P 91 G 108 T 92 G 109 G 93 K 110 E 94 I 111 L 95 A 112 A 96 D 113 A 97 L 114 A 98 I 115 I 99 N 116 A 100 K 117 D 101 F 118 A 102 F 119 F 103 G 120 G 104 S 121 S 105 F 122 F 106 E 123 D 107 K 124 K 108 F 125 F 109 K 126 R 110 E 127 A 111 E 128 Q 112 F 129 F 113 S 130 H 114 Q 131 A 115 A 132 A 116 A 133 A 117 K 134 T 118 N 135 T 119 V 136 V 120 E 137 Q 121 G 138 G 122 V 139 S 123 G 140 G 124 W 141 W 125 A 142 A 126 I 143 A 127 L 144 L 128 V 145 G 129 Y 146 W 130 E 147 D 131 P 148 T 132 L 149 L 133 E 150 G 134 E 151 N 135 Q 152 K 136 L 153 L 137 L 154 L 138 I 155 I 139 L 156 F 140 Q 157 Q 141 I 158 V 142 E 159 Y 143 K 160 D 144 H 161 H 145 N 162 Q 146 L 163 T 147 M 164 N 148 H 165 F 149 A 166 P 150 A 167 L 151 D 168 G 152 A 169 I 153 Q 170 V 154 V 171 P 155 L 172 L 156 L 173 L 157 A 174 L 158 L 175 L 159 D 176 D 160 V 177 M 161 W 178 W 162 E 179 E 163 H 180 H 164 A 181 A 165 Y 182 F 166 Y 183 Y 167 L 184 L 168 Q 185 Q 169 Y 186 Y 170 K 187 K 171 N 188 N 172 D 189 V 173 R 190 K 174 G 191 V 175 S 192 D 176 Y 193 F 177 V 194 A 178 D 195 K 179 N 196 A 180 W 197 F 181 W 198 W 182 N 199 N 183 V 200 V 184 V 201 V 185 N 202 N 186 W 203 W 187 D 204 A 188 D 205 D 189 V 206 V 190 E 207 Q 191 R 208 S 192 R 209 R 193 L 210 Y 194 Q 211 A 195 K 212 A 196 A 213 A 197 L 214 T 198 N 215 S 199 G 216 Q _ Q 217 T _ I 218 K _ A 219 G _ L 220 L _ TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1isc_A Y 18 F 2 T 19 E 3 L 20 L 4 P 21 P 5 P 22 A 6 L 23 L 7 P 24 P 8 Y 25 Y 9 A 26 A 10 Y 27 K 11 N 28 D 12 A 29 A 13 L 30 L 14 E 31 A 15 P 32 P 16 Y 33 H 17 I 34 I 18 S 35 S 19 A 36 A 20 E 37 E 21 I 38 T 22 M 39 I 23 Q 40 E 24 L 41 Y 25 H 42 H 26 H 43 Y 27 Q 44 G 28 K 45 K 29 H 46 H 30 H 47 H 31 Q 48 Q 32 G 49 T 33 Y 50 Y 34 V 51 V 35 N 52 T 36 G 53 N 37 A 54 L 38 N 55 N 39 A 56 N 40 A 57 L 41 L 58 I 42 E 59 K 43 K 60 G 44 L 61 T 45 E 62 A 46 K 63 F 47 F 64 E 48 R 65 G 49 K 66 K 50 G 67 S 51 E 68 L 52 A 69 E 53 Q 70 E 54 I 71 I 55 I 73 I 56 R 74 R 57 A 75 S 58 V 76 S 59 L 77 E 60 R 78 G 61 D 79 G 62 L 80 V 63 S 81 F 64 F 82 N 65 H 83 N 66 L 84 A 67 N 85 A 68 G 86 Q 69 H 87 V 70 I 88 W 71 L 89 N 72 H 90 H 73 S 91 T 74 I 92 F 75 F 93 Y 76 W 94 W 77 P 95 N 78 N 96 C 79 M 97 L 80 A 98 A 81 P 99 P 82 P 100 N 83 G 103 A 84 G 104 G 85 G 105 G 86 K 106 E 87 P 107 P 88 G 108 T 89 G 109 G 90 K 110 K 91 I 111 V 92 A 112 A 93 D 113 E 94 L 114 A 95 I 115 I 96 N 116 A 97 K 117 A 98 F 118 S 99 F 119 F 100 G 120 G 101 S 121 S 102 F 122 F 103 E 123 A 104 K 124 D 105 F 125 F 106 K 126 K 107 E 127 A 108 E 128 Q 109 F 129 F 110 S 130 T 111 Q 131 D 112 A 132 A 113 A 133 A 114 K 134 I 115 N 135 K 116 V 136 N 117 E 137 F 118 G 138 G 119 V 139 S 120 G 140 G 121 W 141 W 122 A 142 T 123 I 143 W 124 L 144 L 125 V 145 V 126 Y 146 K 127 E 147 N 128 P 148 S 129 E 150 D 130 E 151 G 131 Q 152 K 132 L 153 L 133 L 154 A 134 I 155 I 135 L 156 V 136 Q 157 S 137 I 158 T 138 E 159 S 139 K 160 N 140 H 161 A 141 N 162 G 142 L 163 T 143 M 164 P 144 H 165 L 145 A 166 T 146 A 167 T 147 D 168 D 148 A 169 A 149 Q 170 T 150 V 171 P 151 L 172 L 152 L 173 L 153 A 174 T 154 L 175 V 155 D 176 D 156 V 177 V 157 W 178 W 158 E 179 E 159 H 180 H 160 A 181 A 161 Y 182 Y 162 Y 183 Y 163 L 184 I 164 Q 185 D 165 Y 186 Y 166 K 187 R 167 N 188 N 168 D 189 A 169 R 190 R 170 G 191 P 171 S 192 G 172 Y 193 Y 173 V 194 L 174 D 195 E 175 N 196 H 176 W 197 F 177 W 198 W 178 N 199 A 179 V 200 L 180 V 201 V 181 N 202 N 182 W 203 W 183 D 204 E 184 D 205 F 185 V 206 V 186 E 207 A 187 R 208 K 188 R 209 N 189 L 210 L 190 Q 211 A 191 K 212 A 192 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1avm_A K 16 A 1 R 17 V 2 Y 18 Y 3 T 19 T 4 L 20 L 5 P 21 P 6 P 22 E 7 L 23 L 8 P 24 P 9 Y 25 Y 10 A 26 D 11 Y 27 Y 12 N 28 S 13 A 29 A 14 L 30 L 15 E 31 E 16 P 32 P 17 Y 33 Y 18 I 34 I 19 S 35 S 20 A 36 G 21 E 37 E 22 I 38 I 23 M 39 M 24 Q 40 E 25 L 41 L 26 H 42 H 27 H 43 H 28 Q 44 D 29 K 45 K 30 H 46 H 31 H 47 H 32 Q 48 K 33 G 49 A 34 Y 50 Y 35 V 51 V 36 N 52 D 37 G 53 G 38 A 54 A 39 N 55 N 40 A 56 T 41 A 57 A 42 L 58 L 43 E 59 D 44 K 60 K 45 L 61 L 46 E 62 A 47 K 63 E 48 F 64 A 49 R 65 R 50 K 66 D 51 G 67 K 52 E 68 A 53 A 69 D 54 Q 70 F 55 I 71 G 56 D 72 A 57 I 73 I 58 R 74 N 59 A 75 K 60 V 76 L 61 L 77 E 62 R 78 K 63 D 79 D 64 L 80 L 65 S 81 A 66 F 82 F 67 H 83 N 68 L 84 L 69 N 85 A 70 G 86 G 71 H 87 H 72 I 88 V 73 L 89 N 74 H 90 H 75 S 91 S 76 I 92 V 77 F 93 F 78 W 94 W 79 P 95 K 80 N 96 N 81 M 97 M 82 A 98 A 83 P 99 P 84 P 100 K 85 G 101 G 86 K 102 S 87 G 103 A 88 G 104 P 89 G 105 E 90 K 106 R 91 P 107 P 92 G 108 T 93 G 109 D 94 K 110 E 95 I 111 L 96 A 112 G 97 D 113 A 98 L 114 A 99 I 115 I 100 N 116 D 101 K 117 E 102 F 118 F 103 F 119 F 104 G 120 G 105 S 121 S 106 F 122 F 107 E 123 D 108 K 124 N 109 F 125 M 110 K 126 K 111 E 127 A 112 E 128 Q 113 F 129 F 114 S 130 T 115 Q 131 A 116 A 132 A 117 A 133 A 118 K 134 T 119 N 135 G 120 V 136 I 121 E 137 Q 122 G 138 G 123 V 139 S 124 G 140 G 125 W 141 W 126 A 142 A 127 I 143 S 128 L 144 L 129 V 145 V 130 Y 146 W 131 E 147 D 132 P 148 P 133 L 149 L 134 E 150 G 135 E 151 K 136 Q 152 R 137 L 153 I 138 L 154 N 139 I 155 T 140 L 156 L 141 Q 157 Q 142 I 158 F 143 E 159 Y 144 K 160 D 145 H 161 H 146 N 162 Q 147 L 163 N 148 M 164 N 149 H 165 L 150 A 166 P 151 A 167 A 152 D 168 G 153 A 169 S 154 Q 170 I 155 V 171 P 156 L 172 L 157 L 173 L 158 A 174 Q 159 L 175 L 160 D 176 D 161 V 177 M 162 W 178 W 163 E 179 E 164 H 180 H 165 A 181 A 166 Y 182 F 167 Y 183 Y 168 L 184 L 169 Q 185 Q 170 Y 186 Y 171 K 187 K 172 N 188 N 173 D 189 V 174 R 190 K 175 G 191 G 176 S 192 D 177 Y 193 Y 178 V 194 V 179 D 195 K 180 N 196 S 181 W 197 W 182 W 198 W 183 N 199 N 184 V 200 V 185 V 201 V 186 N 202 N 187 W 203 W 188 D 204 D 189 D 205 D 190 V 206 V 191 E 207 A 192 R 208 L 193 R 209 R 194 L 210 F 195 Q 211 S 196 K 212 E 197 A 213 A 198 L 214 R 199 N 215 V 200 G 216 A 201 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1mng_A K 16 Y 2 R 17 P 3 Y 18 F 4 T 19 K 5 L 20 L 6 P 21 P 7 P 22 D 8 L 23 L 9 P 24 G 10 Y 25 Y 11 A 26 P 12 Y 27 Y 13 N 28 E 14 A 29 A 15 L 30 L 16 E 31 E 17 P 32 P 18 Y 33 H 19 I 34 I 20 S 35 D 21 A 36 A 22 E 37 K 23 I 38 T 24 M 39 M 25 Q 40 E 26 L 41 I 27 H 42 H _ H 43 H 29 Q 44 Q 30 K 45 K 31 H 46 H 32 H 47 H 33 Q 48 G 34 G 49 A 35 Y 50 Y _ V 51 V 37 N 52 T 38 G 53 N 39 A 54 L 40 N 55 N 41 A 56 A 42 A 57 A 43 L 58 L 44 E 59 E 45 K 60 K 46 L 61 Y 47 E 62 P 48 K 63 Y 49 F 64 L 50 R 65 H 51 K 66 G 52 G 67 V 53 E 68 E 54 A 69 V 55 Q 70 E 56 I 71 V 57 D 72 L 58 I 73 L 59 R 74 R 60 A 75 D 68 V 76 I 69 L 77 Q 70 R 78 T 71 D 79 A 72 L 80 V 73 S 81 R 74 F 82 N 75 H 83 N 76 L 84 G 77 N 85 G 78 G 86 G 79 H 87 H 80 I 88 L 81 L 89 N 82 H 90 H _ S 91 S 84 I 92 L 85 F 93 F 86 W 94 W 87 P 95 R 88 N 96 L 89 M 97 L 90 A 98 T 91 P 99 P 92 P 100 G 93 G 103 G 94 G 104 A 95 G 105 K 96 K 106 E 97 P 107 P 98 G 108 V 99 G 109 G 100 K 110 E 101 I 111 L 102 A 112 K 103 D 113 K 104 L 114 A 105 I 115 I 106 N 116 D 107 K 117 E 108 F 118 Q 109 F 119 F 110 G 120 G 111 S 121 G 112 F 122 F 113 E 123 Q 114 K 124 A 115 F 125 L 116 K 126 K 117 E 127 E 118 E 128 K 119 F 129 L 120 S 130 T 121 Q 131 Q 122 A 132 A 123 A 133 A 124 K 134 M 125 N 135 G 126 V 136 R 127 E 137 F 128 G 138 G 129 V 139 S 130 G 140 G 131 W 141 W 132 A 142 A 133 I 143 W 134 L 144 L 135 V 145 V 136 Y 146 K 137 E 147 D 138 P 148 P 139 E 150 F 140 E 151 G 141 Q 152 K 142 L 153 L 143 L 154 H 144 I 155 V 145 L 156 L 146 Q 157 S 147 I 158 T 148 E 159 P 149 K 160 N 150 H 161 Q 151 N 162 D 152 L 163 N 153 M 164 P 154 H 165 V 155 A 166 M 156 A 167 E 157 D 168 G 158 A 169 F 159 Q 170 T 160 V 171 P 161 L 172 I 162 L 173 V 163 A 174 G 164 L 175 I 165 D 176 D _ V 177 V 167 W 178 W 168 E 179 E 169 H 180 H _ A 181 A 171 Y 182 Y 172 Y 183 Y 173 L 184 L 174 Q 185 K 175 Y 186 Y 176 K 187 Q 177 N 188 N 178 D 189 R 179 R 190 R 180 G 191 A 181 S 192 D 182 Y 193 Y 183 V 194 L 184 D 195 Q 185 N 196 A 186 W 197 I 187 W 198 W 188 N 199 N 189 V 200 V 190 V 201 L 191 N 202 N 192 W 203 W 193 D 204 D 194 D 205 V 195 V 206 A 196 E 207 E 197 R 208 E 198 R 209 F 199 L 210 F 200 Q 211 K 201 K 212 K 202 A 213 A 203 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1d5n_A Y 18 Y 2 T 19 T 3 L 20 L 4 P 21 P 5 P 22 S 6 L 23 L 7 P 24 P 8 Y 25 Y 9 A 26 A 10 Y 27 Y 11 N 28 D 12 A 29 A 13 L 30 L 14 E 31 E 15 P 32 P 16 Y 33 H 17 I 34 F 18 S 35 D 19 A 36 K 20 E 37 Q 21 I 38 T 22 M 39 M 23 Q 40 E 24 L 41 I 25 H 42 H 26 H 43 H 27 Q 44 T 28 K 45 K 29 H 46 H 30 H 47 H 31 Q 48 Q 32 G 49 T 33 Y 50 Y 34 V 51 V 35 N 52 N 36 G 53 N 37 A 54 A 38 N 55 N 39 A 56 A 40 A 57 A 41 L 58 L 42 E 59 E 43 K 60 S 44 L 61 L 45 E 62 P 46 K 63 E 47 F 64 F 48 R 65 A 49 K 66 N 50 G 67 L 51 E 68 P 52 A 69 V 53 Q 70 E 54 I 71 E 55 D 72 L 56 I 73 I 57 R 74 T 58 A 75 D 66 V 76 K 67 L 77 K 68 R 78 T 69 D 79 V 70 L 80 L 71 S 81 R 72 F 82 N 73 H 83 N 74 L 84 A 75 N 85 G 76 G 86 G 77 H 87 H 78 I 88 A 79 L 89 N 80 H 90 H 81 S 91 S 82 I 92 L 83 F 93 F 84 W 94 W 85 P 95 K 86 N 96 G 87 M 97 L 88 A 98 K 89 G 103 K 90 G 104 G 91 G 105 T 92 K 106 T 93 P 107 L 94 G 108 Q 95 G 109 G 96 K 110 D 97 I 111 L 98 A 112 K 99 D 113 A 100 L 114 A 101 I 115 I 102 N 116 E 103 K 117 R 104 F 118 D 105 F 119 F 106 G 120 G 107 S 121 S 108 F 122 V 109 E 123 D 110 K 124 N 111 F 125 F 112 K 126 K 113 E 127 A 114 E 128 E 115 F 129 F 116 S 130 E 117 Q 131 K 118 A 132 A 119 A 133 A 120 K 134 A 121 N 135 S 122 V 136 R 123 E 137 F 124 G 138 G 125 V 139 S 126 G 140 G 127 W 141 W 128 A 142 A 129 I 143 W 130 L 144 L 131 V 145 V 132 Y 146 L 133 E 147 K 134 E 150 G 135 E 151 D 136 Q 152 K 137 L 153 L 138 L 154 A 139 I 155 V 140 L 156 V 141 Q 157 S 142 I 158 T 143 E 159 A 144 K 160 N 145 H 161 Q 146 N 162 D 147 L 163 S 148 M 164 P 149 H 165 L 150 A 166 M 151 A 167 G 152 D 168 E 153 A 169 A 154 Q 170 F 161 V 171 P 162 L 172 I 163 L 173 M 164 A 174 G 165 L 175 L 166 D 176 D 167 V 177 V 168 W 178 W 169 E 179 E 170 H 180 H 171 A 181 A 172 Y 182 Y 173 Y 183 Y 174 L 184 L 175 Q 185 K 176 Y 186 F 177 K 187 Q 178 N 188 N 179 D 189 R 180 R 190 R 181 G 191 P 182 S 192 D 183 Y 193 Y 184 V 194 I 185 D 195 K 186 N 196 E 187 W 197 F 188 W 198 W 189 N 199 N 190 V 200 V 191 V 201 V 192 N 202 N 193 W 203 W 194 D 204 D 195 D 205 E 196 V 206 A 197 E 207 A 198 R 208 A 199 R 209 R 200 L 210 F 201 Q 211 A 202 K 212 A 203 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1qnn_A K 16 M 1 R 17 T 2 Y 18 H 3 T 19 E 4 L 20 L 5 P 21 I 6 P 22 S 7 L 23 L 8 P 24 P 9 Y 25 Y 10 A 26 A 11 Y 27 V 12 N 28 D 13 A 29 A 14 L 30 L 15 E 31 A 16 P 32 P 17 Y 33 V 18 I 34 I 19 S 35 S 20 A 36 K 21 E 37 E 22 I 38 T 23 M 39 V 24 Q 40 E 25 L 41 F 26 H 42 H 27 H 43 H 28 Q 44 G 29 K 45 K 30 H 46 H 31 H 47 L 32 Q 48 K 33 G 49 T 34 Y 50 Y 35 V 51 V 36 N 52 D 37 G 53 N 38 A 54 L 39 N 55 N 40 A 56 K 41 A 57 L 42 L 58 I 43 E 59 I 44 K 60 G 45 L 61 T 46 E 62 E 47 K 63 F 48 F 64 E 49 R 65 N 50 K 66 A 51 G 67 D 52 E 68 L 53 A 69 N 54 Q 70 T 55 I 71 I 56 I 73 V 57 R 74 Q 58 A 75 K 59 V 76 S 60 L 77 E 61 R 78 G 62 D 79 G 63 L 80 I 64 S 81 F 65 F 82 N 66 H 83 N 67 L 84 A 68 N 85 G 69 G 86 Q 70 H 87 T 71 I 88 L 72 L 89 N 73 H 90 H 74 S 91 N 75 I 92 L 76 F 93 Y 77 W 94 F 78 P 95 T 79 N 96 Q 80 M 97 F 81 A 98 R 82 P 99 P 83 P 100 G 84 G 103 K 85 G 104 G 86 G 105 G 87 K 106 A 88 P 107 P 89 G 108 K 90 G 109 G 91 K 110 K 92 I 111 L 93 A 112 G 94 D 113 E 95 L 114 A 96 I 115 I 97 N 116 D 98 K 117 K 99 F 118 Q 100 F 119 F 101 G 120 G 102 S 121 S 103 F 122 F 104 E 123 E 105 K 124 K 106 F 125 F 107 K 126 K 108 E 127 E 109 E 128 E 110 F 129 F 111 S 130 N 112 Q 131 T 113 A 132 A 114 A 133 G 115 K 134 T 116 N 135 T 117 V 136 L 118 E 137 F 119 G 138 G 120 V 139 S 121 G 140 G 122 W 141 W 123 A 142 V 124 I 143 W 125 L 144 L 126 V 145 A 127 Y 146 S 128 E 147 D 129 P 148 A 130 E 150 N 131 E 151 G 132 Q 152 K 133 L 153 L 134 L 154 S 135 I 155 I 136 L 156 E 137 Q 157 K 138 I 158 E 139 E 159 P 140 K 160 N 141 H 161 A 142 N 162 G 143 L 163 N 144 M 164 P 145 H 165 V 146 A 166 R 147 A 167 K 148 D 168 G 149 A 169 L 150 Q 170 N 151 V 171 P 152 L 172 L 153 L 173 L 154 A 174 G 155 L 175 F 156 D 176 D 157 V 177 V 158 W 178 W 159 E 179 E 160 H 180 H 161 A 181 A 162 Y 182 Y 163 Y 183 Y 164 L 184 L 165 Q 185 T 166 Y 186 Y 167 K 187 Q 168 N 188 N 169 D 189 R 170 R 190 R 171 G 191 A 172 S 192 D 173 Y 193 H 174 V 194 L 175 D 195 K 176 N 196 D 177 W 197 L 178 W 198 W 179 N 199 S 180 V 200 I 181 V 201 V 182 N 202 D 183 W 203 W 184 D 204 D 185 D 205 I 186 V 206 V 187 E 207 E 188 R 208 S 189 R 209 R 190 L 210 Y 191 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1sss_A V 13 I 4 T 14 Q 5 T 15 F 6 K 16 K 7 R 17 K 8 Y 18 Y 9 T 19 E 10 L 20 L 11 P 21 P 12 P 22 P 13 L 23 L 14 P 24 P 15 Y 25 Y 16 A 26 K 17 Y 27 I 18 N 28 D 19 A 29 A 20 L 30 L 21 E 31 E 22 P 32 P 23 Y 33 Y 24 I 34 I 25 S 35 S 26 A 36 K 27 E 37 D 28 I 38 I 29 M 39 I 30 Q 40 D 31 L 41 V 32 H 42 H 33 H 43 Y 34 Q 44 N 35 K 45 G 36 H 46 H 37 H 47 H 38 Q 48 K 39 G 49 G 40 Y 50 Y 41 V 51 V 42 N 52 N 43 G 53 G 44 A 54 A 45 N 55 N 46 A 56 S 47 A 57 L 48 L 58 L 49 E 59 E 50 K 60 R 51 L 61 L 52 E 62 E 53 K 63 K 54 F 64 V 55 R 65 V 56 K 66 K 57 G 67 G 58 E 68 D 59 A 69 L 60 Q 70 Q 61 I 71 T 62 D 72 G 63 I 73 Q 64 R 74 Y 65 A 75 G 69 V 76 I 70 L 77 I 71 R 78 R 72 D 79 G 73 L 80 L 74 S 81 T 75 F 82 F 76 H 83 N 77 L 84 I 78 N 85 N 79 G 86 G 80 H 87 H 81 I 88 K 82 L 89 L 83 H 90 H 84 S 91 A 85 I 92 L 86 F 93 Y 87 W 94 W 88 P 95 E 89 N 96 N 90 M 97 M 91 A 98 A 92 P 99 P 93 P 100 S 94 G 101 G 95 K 102 K 96 G 103 G 97 G 104 G 98 G 105 G 99 K 106 K 100 P 107 P 101 G 108 G 102 G 109 G 103 K 110 A 104 I 111 L 105 A 112 A 106 D 113 D 107 L 114 L 108 I 115 I 109 N 116 N 110 K 117 K 111 F 118 Q 112 F 119 Y 113 G 120 G 114 S 121 S 115 F 122 F 116 E 123 D 117 K 124 R 118 F 125 F 119 K 126 K 120 E 127 Q 121 E 128 V 122 F 129 F 123 S 130 T 124 Q 131 E 125 A 132 T 126 A 133 A 127 K 134 N 128 N 135 S 129 V 136 L 130 E 137 P 131 G 138 G 132 V 139 T 133 G 140 G 134 W 141 W 135 A 142 A 136 I 143 V 137 L 144 L 138 V 145 Y 139 Y 146 Y 140 E 147 D 141 P 148 T 142 L 149 E 143 E 150 S 144 E 151 G 145 Q 152 N 146 L 153 L 147 L 154 Q 148 I 155 I 149 L 156 M 150 Q 157 T 151 I 158 F 152 E 159 E 153 K 160 N 154 H 161 H 155 N 162 F 156 L 163 Q 157 M 164 N 158 H 165 H 159 A 166 I 160 A 167 A 161 D 168 E 162 A 169 I 163 Q 170 P 164 V 171 I 165 L 172 I 166 L 173 L 167 A 174 I 168 L 175 L 169 D 176 D 170 V 177 E 171 W 178 F 172 E 179 E 173 H 180 H 174 A 181 A 175 Y 182 Y 176 Y 183 Y 177 L 184 L 178 Q 185 Q 179 Y 186 Y 180 K 187 K 181 N 188 N 182 D 189 K 183 R 190 R 184 G 191 A 185 S 192 D 186 Y 193 Y 187 V 194 V 188 D 195 N 189 N 196 A 190 W 197 W 191 W 198 W 192 N 199 N 193 V 200 V 194 V 201 V 195 N 202 N 196 W 203 W 197 D 204 D 198 D 205 A 199 V 206 A 200 E 207 E 201 R 208 K 202 R 209 K 203 L 210 L 204 Q 211 Q 205 K 212 K 206 A 213 Y 207 L 214 L 208 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1b06_A V 13 I 4 T 14 Q 5 T 15 L 6 K 16 K 7 R 17 R 8 Y 18 Y 9 T 19 E 10 L 20 F 11 P 21 P 12 P 22 Q 13 L 23 L 14 P 24 P 15 Y 25 Y 16 A 26 K 17 Y 27 V 18 N 28 D 19 A 29 A 20 L 30 L 21 E 31 E 22 P 32 P 23 Y 33 Y 24 I 34 I 25 S 35 S 26 A 36 K 27 E 37 D 28 I 38 I 29 M 39 I 30 Q 40 D 31 L 41 V 32 H 42 H 33 H 43 Y 34 Q 44 N 35 K 45 G 36 H 46 H 37 H 47 H 38 Q 48 K 39 G 49 G 40 Y 50 Y 41 V 51 V 42 N 52 N 43 G 53 G 44 A 54 A 45 N 55 N 46 A 56 S 47 A 57 L 48 L 58 L 49 E 59 D 50 K 60 R 51 L 61 L 52 E 62 E 53 K 63 K 54 F 64 L 55 R 65 I 56 K 66 K 57 G 67 G 58 E 68 D 59 A 69 L 60 Q 70 P 61 I 71 Q 62 D 72 G 63 I 73 Q 64 R 74 Y 65 A 75 G 69 V 76 I 70 L 77 L 71 R 78 R 72 D 79 G 73 L 80 L 74 S 81 T 75 F 82 F 76 H 83 N 77 L 84 I 78 N 85 N 79 G 86 G 80 H 87 H 81 I 88 K 82 L 89 L 83 H 90 H 84 S 91 A 85 I 92 I 86 F 93 Y 87 W 94 W 88 P 95 N 89 N 96 N 90 M 97 M 91 A 98 A 92 P 99 P 93 P 100 A 94 G 101 G 95 K 102 K 96 G 103 G 97 G 104 G 98 G 105 G 99 K 106 K 100 P 107 P 101 G 108 G 102 G 109 G 103 K 110 A 104 I 111 L 105 A 112 A 106 D 113 D 107 L 114 L 108 I 115 I 109 N 116 D 110 K 117 K 111 F 118 Q 112 F 119 Y 113 G 120 G 114 S 121 S 115 F 122 F 116 E 123 D 117 K 124 R 118 F 125 F 119 K 126 K 120 E 127 Q 121 E 128 V 122 F 129 F 123 S 130 S 124 Q 131 E 125 A 132 S 126 A 133 A 127 K 134 N 128 N 135 S 129 V 136 L 130 E 137 P 131 G 138 G 132 V 139 S 133 G 140 G 134 W 141 W 135 A 142 T 136 I 143 V 137 L 144 L 138 V 145 Y 139 Y 146 Y 140 E 147 D 141 P 148 N 142 L 149 E 143 E 150 S 144 E 151 G 145 Q 152 N 146 L 153 L 147 L 154 Q 148 I 155 I 149 L 156 M 150 Q 157 T 151 I 158 V 152 E 159 E 153 K 160 N 154 H 161 H 155 N 162 F 156 L 163 M 157 M 164 N 158 H 165 H 159 A 166 I 160 A 167 A 161 D 168 E 162 A 169 L 163 Q 170 P 164 V 171 V 165 L 172 I 166 L 173 L 167 A 174 I 168 L 175 V 169 D 176 D 170 V 177 E 171 W 178 F 172 E 179 E 173 H 180 H 174 A 181 A 175 Y 182 Y 176 Y 183 Y 177 L 184 L 178 Q 185 Q 179 Y 186 Y 180 K 187 K 181 N 188 N 182 D 189 K 183 R 190 R 184 G 191 G 185 S 192 D 186 Y 193 Y 187 V 194 L 188 D 195 N 189 N 196 A 190 W 197 W 191 W 198 W 192 N 199 N 193 V 200 V 194 V 201 V 195 N 202 N 196 W 203 W 197 D 204 D 198 D 205 D 199 V 206 A 200 E 207 E 201 R 208 K 202 R 209 R 203 L 210 L 204 Q 211 Q 205 K 212 K 206 A 213 Y 207 L 214 L 208 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1coj_A Y 18 H 3 T 19 K 4 L 20 L 5 P 21 E 6 P 22 P 7 L 23 K 8 P 24 D 9 Y 25 H 10 A 26 L 11 Y 27 K 12 N 28 P 13 A 29 Q 14 L 30 N 15 E 31 L 16 P 32 E 17 Y 33 G 18 I 34 I 19 S 35 S 20 A 36 N 21 E 37 E 22 I 38 Q 23 M 39 I 24 Q 40 E 25 L 41 P 26 H 42 H 27 H 43 F 28 Q 44 E 29 K 45 A 30 H 46 H 31 H 47 Y 32 Q 48 K 33 G 49 G 34 Y 50 Y 35 V 51 V 36 N 52 A 37 G 53 K 38 A 54 Y 39 N 55 N 40 A 56 E 41 A 57 I 42 L 58 Q 43 E 59 E 44 K 60 K 45 L 61 L 46 E 62 A 47 K 63 D 48 F 64 Q 49 R 65 K 56 K 66 A 57 G 67 N 58 E 68 Q 59 A 69 N 60 Q 70 Y 61 I 71 S 62 D 72 E 63 I 73 Y 64 R 74 R 65 A 75 E 66 V 76 L 67 L 77 K 68 R 78 V 69 D 79 E 70 L 80 E 71 S 81 T 72 F 82 F 73 H 83 N 74 L 84 Y 75 N 85 M 76 G 86 G 77 H 87 V 78 I 88 V 79 L 89 L 80 H 90 H 81 S 91 E 82 I 92 L 83 F 93 Y 84 W 94 F 85 P 95 G 86 N 96 M 87 M 97 L 88 A 98 T 89 P 99 P 90 K 102 G 91 G 103 G 92 G 104 K 93 G 105 G 94 K 106 E 95 P 107 P 96 G 108 S 97 G 109 E 98 K 110 A 99 I 111 L 100 A 112 K 101 D 113 K 102 L 114 K 103 I 115 I 104 N 116 E 105 K 117 E 106 F 118 D 107 F 119 I 108 G 120 G 109 S 121 G 110 F 122 L 111 E 123 D 112 K 124 A 113 F 125 C 114 K 126 T 115 E 127 N 116 E 128 E 117 F 129 L 118 S 130 K 119 Q 131 A 120 A 132 A 121 A 133 A 122 V 136 M 123 E 137 A 124 G 138 F 125 V 139 R 126 G 140 G 127 W 141 W 128 A 142 A 129 I 143 I 130 L 144 L 131 V 145 G 132 Y 146 L 133 E 147 D 134 P 148 I 135 L 149 F 136 E 150 S 137 E 151 G 138 Q 152 R 139 L 153 L 140 L 154 V 141 I 155 V 142 L 156 N 143 Q 157 G 144 I 158 L 145 E 159 D 146 K 160 A 147 H 161 H 148 N 162 N 149 L 163 V 150 M 164 Y 151 H 165 N 152 A 166 L 153 A 167 T 154 D 168 G 155 A 169 L 156 Q 170 I 157 V 171 P 158 L 172 L 159 L 173 I 160 A 174 V 161 L 175 I 162 D 176 D 163 V 177 T 164 W 178 Y 165 E 179 E 166 H 180 H 167 A 181 A 168 Y 182 Y 169 Y 183 Y 170 L 184 V 171 Q 185 D 172 Y 186 Y 173 K 187 K 174 N 188 N 175 D 189 K 176 R 190 R 177 G 191 P 178 S 192 P 179 Y 193 Y 180 V 194 I 181 D 195 D 182 N 196 A 183 W 197 F 184 W 198 F 185 N 199 K 186 V 200 N 187 V 201 I 188 N 202 N 189 W 203 W 190 D 204 D 191 D 205 V 192 V 206 V 193 E 207 N 194 R 208 E 195 R 209 R 196 L 210 F 197 Q 211 E 198 K 212 K 199 A 213 A 200 L 214 M 201 N 215 K 202 G 216 A 203 Q 217 Y 204 I 218 E 205 A 219 A 206 L 220 L 207 K 221 K 208 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1nul_A E 68 E 3 A 69 K 4 Q 70 Y 5 I 71 I 6 D 72 V 7 I 73 T 8 R 74 W 9 A 75 D 10 V 76 M 11 L 77 L 12 R 78 Q 13 D 79 I 14 L 80 H 15 S 81 A 16 F 82 R 17 H 83 K 18 L 84 L 19 N 85 A 20 G 86 S 21 H 87 R 22 I 88 L 23 L 89 M 24 H 90 P 25 S 91 S 26 I 92 E 27 F 93 Q 28 W 94 W 29 P 95 K 30 N 96 G 31 M 97 I 32 A 98 I 33 P 99 A 34 P 100 V 35 G 101 S 36 K 102 R 37 G 103 G 38 G 104 G 39 G 105 L 40 K 106 V 41 P 107 P 42 G 108 G 43 G 109 A 44 K 110 L 45 I 111 L 46 A 112 A 47 D 113 R 48 L 114 E 49 I 115 L 50 N 116 G 51 K 117 I 52 F 118 H 54 F 119 V 55 G 120 D 56 S 121 T 57 F 122 V 58 E 123 C 59 K 124 I 60 F 125 S 61 Q 157 S 62 I 158 L 71 E 159 K 72 K 160 V 73 H 161 L 74 N 162 K 75 L 163 R 76 M 164 A 77 H 165 E 78 A 166 G 79 A 167 D 80 D 168 G 81 A 169 E 82 Q 170 G 83 V 171 F 84 L 172 I 85 L 173 V 86 A 174 I 87 L 175 D 88 D 176 D 89 V 177 L 90 W 178 V 91 E 179 D 92 H 180 T 93 A 181 G 94 Y 182 G 95 Y 183 T 96 L 184 A 97 Q 185 V 98 Y 186 A 99 K 187 I 100 N 188 R 101 D 189 E 102 R 190 M 103 G 191 Y 104 S 192 P 105 W 197 K 106 W 198 A 107 N 199 H 108 V 200 F 109 V 201 V 110 N 202 T 111 W 203 I 112 D 204 F 113 D 205 A 114 V 206 K 115 E 207 P 116 R 208 A 117 R 209 G 118 L 210 R 119 Q 211 P 120 K 212 L 121 A 213 V 122 L 214 D 123 N 215 D 124 G 216 Y 125 Q 217 V 126 I 218 V 127 A 219 D 128 L 220 I 129 K 221 P 130 L 222 Q 131 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1cgo K 45 K 10 H 46 Y 11 H 47 R 12 Q 48 Q 13 G 49 S 14 Y 50 A 15 V 51 L 16 N 52 T 17 G 53 L 18 A 54 M 19 N 55 A 20 A 56 S 21 A 57 H 22 L 58 F 23 E 59 G 24 K 60 R 25 L 61 M 26 E 62 T 27 K 63 P 28 F 64 V 29 R 65 V 30 K 66 K 31 G 67 G 32 E 68 Q 33 A 69 A 34 Q 70 P 35 I 71 Y 36 D 72 D 37 I 73 A 38 R 74 A 39 A 75 Q 40 V 76 I 41 L 77 K 42 R 78 A 43 D 79 N 44 L 80 V 45 S 81 E 46 F 82 V 47 H 83 L 48 H 87 K 49 I 88 T 50 L 89 L 51 H 90 T 52 S 91 A 53 I 92 L 54 F 93 P 55 W 94 W 56 P 95 A 57 N 96 A 58 M 97 F 59 A 98 G 60 P 99 P 61 P 100 G 62 G 101 T 63 K 102 E 64 G 103 G 65 A 112 G 66 D 113 D 67 L 114 A 68 I 115 R 69 N 116 P 70 K 117 E 71 F 118 I 72 F 119 W 73 G 120 S 74 S 121 D 75 F 122 A 76 E 123 A 77 K 124 S 78 F 125 F 79 K 126 K 80 E 127 Q 81 E 128 K 82 F 129 Q 83 S 130 Q 84 Q 131 A 85 A 132 F 86 A 133 Q 87 K 134 D 88 N 135 N 89 V 136 I 90 E 137 V 91 G 138 K 92 V 139 L 93 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 3gpd_G K 110 P 158 I 111 L 159 A 112 A 160 D 113 K 161 L 114 V 162 I 115 I 163 N 116 H 164 K 117 D 165 F 118 H 166 F 119 F 167 G 120 G 168 S 121 I 169 F 122 V 170 E 123 E 171 K 124 G 172 F 125 L 173 K 126 M 174 E 127 T 175 E 128 T 176 F 129 V 177 S 130 H 178 Q 131 A 179 A 132 I 180 A 133 T 181 K 134 A 182 N 135 T 183 V 136 Q 184 TER END PFRMAT AL TARGET T0128 AUTHOR UCSC SAM-T99 Web Server METHOD This pairwise alignment was produced using the SAM-T99 method METHOD METHOD ------------- Citations (SAM, SAM-T99, HMMs) ----------------- METHOD R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: METHOD Extension and analysis of the basic method, CABIOS 12:95-107, 1996. METHOD K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting METHOD remote protein homologies, Bioinformatics 14(10):846-856, 1999. METHOD A. Krogh et al., Hidden Markov models in computational biology: METHOD Applications to protein modeling, JMB 235:1501-1531, Feb 1994. MODEL 1 PARENT 1dd8_A M 1 D 41 R 2 S 42 G 3 G 43 S 4 M 44 H 5 R 45 H 6 S 46 H 7 H 47 H 8 V 48 H 9 W 49 H 10 G 50 G 11 N 51 S 12 V 52 V 13 K 53 T 14 K 63 T 15 V 64 K 16 V 65 R 17 R 66 Y 18 F 67 T 19 M 68 L 20 S 69 P 21 D 70 P 22 A 71 L 23 S 72 P 24 I 73 Y 25 Y 74 A 26 A 75 Y 27 F 76 N 28 L 77 A 29 S 78 L 30 M 79 E 31 E 80 P 32 Q 81 Y 33 A 82 I 34 I 83 S 35 A 84 A 36 D 85 E 37 A 86 I 38 G 87 M 39 L 88 Q 40 S 89 L 41 P 90 H 42 E 91 H 43 A 92 Q 44 Y 93 K 45 Q 94 H 46 N 95 G 49 A 137 Y 50 M 138 V 51 A 139 N 52 S 140 G 53 G 141 A 54 V 142 N 55 S 143 A 56 A 144 A 57 C 145 L 58 L 146 E 59 A 147 K 60 T 148 L 61 P 149 E 62 F 150 K 63 K 151 F 64 I 152 R 65 H 153 K 66 E 196 G 67 M 197 E 68 A 198 A 69 C 199 Q 70 E 200 I 71 F 201 D 72 D 202 I 73 A 203 R 74 M 204 A 75 G 205 V 76 A 206 L 77 L 207 R 78 S 208 D 79 E 244 L 80 H 245 S 81 A 246 F 82 L 247 H 83 A 248 L 84 R 249 N 85 G 250 G 86 A 251 H 87 H 252 I 88 I 253 L 89 Y 254 H 90 A 255 S 91 E 256 I 92 I 257 F 93 V 258 W 94 G 259 P 95 Y 260 N 96 G 261 M 97 A 262 A 98 T 263 P 99 S 264 P 100 D 265 G 101 G 266 K 102 A 267 G 103 D 268 G 104 M 269 G 105 V 270 K 106 A 271 P 107 P 272 G 108 S 273 G 109 G 274 K 110 G 276 I 111 A 277 A 112 V 278 D 113 R 279 L 114 C 280 I 115 M 281 N 116 K 282 K 117 M 283 F 118 A 284 F 119 M 285 G 120 H 286 S 121 G 287 F 122 V 288 E 123 D 289 K 124 T 290 E 128 P 291 F 129 I 292 S 130 D 293 Q 131 Y 294 A 132 L 295 A 133 N 296 K 134 S 297 N 135 H 298 V 136 G 299 E 137 T 300 G 138 S 301 V 139 T 302 G 140 P 303 W 141 V 304 A 142 G 305 I 143 D 306 L 144 V 307 V 145 K 308 Y 146 E 309 E 147 L 310 P 148 A 311 L 149 A 312 E 150 I 313 E 151 R 314 Q 152 E 315 L 153 V 316 L 154 F 317 I 155 G 318 L 156 D 319 Q 157 K 320 I 158 S 321 E 159 P 322 K 160 A 323 H 161 I 324 N 162 S 325 L 163 A 326 M 164 T 327 H 165 K 328 A 166 A 329 A 167 M 330 D 168 T 331 A 169 G 332 Q 170 H 333 V 171 S 334 L 172 L 335 L 173 G 336 A 174 A 337 L 175 A 338 D 176 G 339 V 177 V 340 W 178 Q 341 E 179 E 342 H 180 A 343 A 181 I 344 Y 182 Y 345 Y 183 S 346 L 184 L 347 K 187 L 348 N 188 M 349 D 189 L 350 R 190 E 351 G 191 H 352 S 192 G 353 Y 193 F 354 V 194 I 355 D 195 A 356 N 196 P 357 W 197 S 358 W 198 I 359 N 199 N 360 V 200 I 361 V 201 E 362 N 202 E 363 W 203 L 364 D 204 D 365 D 205 E 366 V 206 Q 367 E 207 A 368 R 208 A 369 R 209 E 381 L 210 L 382 Q 211 T 383 K 212 T 384 A 213 V 385 L 214 M 386 N 215 N 396 G 216 A 397 Q 217 T 398 I 218 L 399 A 219 V 400 L 220 M 401 K 221 R 402 L 222 K 403 TER END --simple mime boundary-- From farmer@cse.ucsc.edu Wed Aug 30 08:15:18 2000 Return-Path: Received: from beta.cse.ucsc.edu (beta.cse.ucsc.edu [128.114.48.15]) by cyborg.bioinfo.pl (8.9.3/8.8.7) with SMTP id IAA11314 for Message-Id: <200008300621.XAA27408@beta.cse.ucsc.edu> Subject: T0128(target 99 secondary structure prediction) MIME-Version: 1.0 Content-type: multipart/mixed; Boundary="simple mime boundary" Apparently-To: T0128.target99@cafasp.bioinfo.pl --simple mime boundary Content-type: text/plain; charset=us-ascii The following is the Target99 secondary structure prediction in the formats you requested. Citation: K. Karplus, C. Barrett, and R. Hughey, Hidden Markov Models for Detecting Remote Protein Homologies, Bioinformatics, 1998, vol. 14, no. 10, pp. 846-856. http://www.cse.ucsc.edu/resesarch/compbio/HMM-apps -------------------------------------------------------- For questions or problems, please see the SAM-T99 FAQ at http://www.cse.ucsc.edu/research/compbio/HMM-apps/sam-t99-faq.html or email us at sam-info@cse.ucsc.edu --simple mime boundary Content-type: text/plain; charset=us-ascii; name='t99-results-967614066.t99secstr.fasta' Content-Disposition: attachment; filename="t99-results-967614066.t99secstr.fasta" >T0128 LLLLLLLLLLLLEEELEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHLHHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHHHHHLLHHHHHHHHHHHHHHLLLLLEEEEEELLLLLLEEEEELLLLLLLLLLLLLEEEEELHHHHHHHHHHHLLLHHHHHHHHHHLLHHHHHHHHHHHHHHHHHLLL --simple mime boundary Content-type: text/plain; charset=us-ascii; name='t99-results-967614066.t99secstr.casp.ss' Content-Disposition: attachment; filename="t99-results-967614066.t99secstr.casp.ss" PFRMAT SS TARGET T0128 AUTHOR UCSC Target99 server METHOD This prediction was derived from the following methods METHOD by averaging the corresponding probabilities: METHOD Method 0: METHOD TARGET T0128 METHOD Using neural net overrep-2500-IDaa13-5-9-7-10-5-9-11-ehl2-seeded2-stride-trained.net METHOD This is a 4-layer network, with METHOD window units METHOD 5 9 METHOD 7 10 METHOD 5 9 METHOD 11 3 (1 EHL2 ) METHOD The input amino acid frequencies were determined from METHOD alignment /projects/compbio/tmp/hmm-target99-beta-11303/target-align-11303.a2m METHOD with weighted counts, using EntropyWeight(1.4 bits/column, 10) METHOD The weighting was determined by the posterior distribution METHOD after regularizing with /projects/compbio/lib/recode3.20comp. METHOD Counts were regularized to probabilities using METHOD /projects/compbio/lib/recode3.20comp METHOD Total sequence weight for alignment was 35.5257 METHOD METHOD CHAIN 1 METHOD Method 1: METHOD Prediction using SAM HMM nearest-neighbor METHOD sequence: T0128 METHOD model_file: /projects/compbio/tmp/sam-nn-tmp.beta.22366/model.mod METHOD database_files: /projects/compbio/bin/scripts/hmm-target99-dir/pcc/data/overrep-2260.verify.mixed.seq /projects/compbio/bin/scripts/hmm-target99-dir/pcc/data/overrep-2260.verify.mixed.2d METHOD scoring_mode: local METHOD null_model: reverse METHOD scoring_algorithm: EM METHOD adjust_score: 2 METHOD date: Tue Aug 29 23:16:16 2000 METHOD Method 2: METHOD ###begin 0 METHOD METHOD Protein secondary structure prediction by universal HMM METHOD HMM file: /projects/compbio/bin/scripts/hmm-target99-dir/pcc/scripts/gdac.test.initreest.38state.abb.isites.gd.updated.ghmm-128reest-1-128-105-0.07gd METHOD Alignment file: /projects/compbio/tmp/hmm-target99-beta-11303/target-align-11303.a2m METHOD METHOD guide seq name: T0128 METHOD ###end 0 MODEL 1 M C 0.563 R C 0.551 G C 0.563 S C 0.52 H C 0.491 H C 0.453 H C 0.442 H C 0.423 H C 0.447 H C 0.452 G C 0.438 S C 0.417 V E 0.356 T E 0.413 T E 0.393 K C 0.405 R E 0.392 Y E 0.436 T E 0.407 L C 0.556 P C 0.667 P C 0.676 L C 0.672 P C 0.668 Y C 0.606 A C 0.629 Y C 0.45 N C 0.457 A C 0.442 L C 0.444 E C 0.505 P C 0.498 Y C 0.48 I C 0.479 S C 0.591 A H 0.698 E H 0.708 I H 0.703 M H 0.694 Q H 0.696 L H 0.673 H H 0.647 H H 0.647 Q H 0.666 K H 0.682 H H 0.679 H H 0.687 Q H 0.681 G H 0.673 Y H 0.665 V H 0.689 N H 0.695 G H 0.689 A H 0.717 N H 0.708 A H 0.727 A H 0.707 L H 0.716 E H 0.699 K H 0.665 L H 0.595 E H 0.619 K H 0.619 F H 0.55 R H 0.478 K C 0.485 G C 0.492 E H 0.507 A H 0.563 Q H 0.618 I H 0.613 D H 0.611 I H 0.61 R H 0.586 A H 0.55 V H 0.517 L H 0.533 R H 0.559 D H 0.557 L H 0.562 S H 0.552 F H 0.485 H C 0.467 L H 0.459 N H 0.493 G H 0.524 H H 0.537 I H 0.547 L H 0.549 H H 0.574 S H 0.587 I H 0.592 F H 0.565 W H 0.56 P H 0.552 N H 0.504 M C 0.416 A C 0.674 P C 0.705 P C 0.702 G C 0.675 K C 0.679 G C 0.722 G C 0.73 G C 0.721 K C 0.708 P C 0.693 G C 0.537 G H 0.649 K H 0.676 I H 0.708 A H 0.734 D H 0.746 L H 0.738 I H 0.726 N H 0.717 K H 0.721 F H 0.667 F H 0.549 G C 0.642 S C 0.654 F H 0.739 E H 0.768 K H 0.78 F H 0.775 K H 0.788 E H 0.798 E H 0.789 F H 0.776 S H 0.751 Q H 0.748 A H 0.705 A H 0.671 K H 0.622 N H 0.536 V C 0.433 E C 0.501 G C 0.622 V C 0.621 G C 0.519 W E 0.441 A E 0.565 I E 0.627 L E 0.646 V E 0.612 Y E 0.541 E C 0.467 P C 0.602 L C 0.605 E C 0.631 E C 0.607 Q C 0.382 L E 0.549 L E 0.604 I E 0.609 L E 0.565 Q E 0.478 I C 0.469 E C 0.58 K C 0.66 H C 0.664 N C 0.676 L C 0.666 M C 0.62 H C 0.52 A C 0.517 A C 0.574 D C 0.633 A C 0.618 Q C 0.453 V E 0.474 L E 0.588 L E 0.604 A E 0.573 L E 0.51 D C 0.395 V H 0.519 W H 0.602 E H 0.641 H H 0.657 A H 0.639 Y H 0.63 Y H 0.631 L H 0.617 Q H 0.58 Y H 0.559 K H 0.443 N C 0.598 D C 0.569 R C 0.534 G H 0.586 S H 0.656 Y H 0.667 V H 0.682 D H 0.688 N H 0.683 W H 0.67 W H 0.635 N H 0.603 V H 0.486 V C 0.405 N C 0.607 W H 0.693 D H 0.715 D H 0.734 V H 0.74 E H 0.744 R H 0.745 R H 0.734 L H 0.731 Q H 0.746 K H 0.735 A H 0.711 L H 0.693 N H 0.69 G H 0.642 Q H 0.577 I H 0.564 A H 0.545 L C 0.497 K C 0.531 L C 0.911 END --simple mime boundary--