make -k T0099-blast.rdb T0099-double-blast.rdb
make[1]: Entering directory `/auto/projects/compbio/experiments/casp4/t99'
/projects/compbio/experiments/casp4/scripts/single-blast -q T0099.seq -interdb /projects/compbio/data/nrp/nr -db /projects/compbio/data/pdb/all-protein > T0099-blast.rdb

starting T0099 with E=10
/projects/compbio/experiments/casp4/scripts/double-blast -q T0099.seq -interdb /projects/compbio/data/nrp/nr -db /projects/compbio/data/pdb/all-protein > T0099-double-blast.rdb

starting T0099 with E=0.000050
T0099 T0099 blasting:
T0099 gi|1174436|sp|P42686|SRK1_SPOLA_59:112 blasting:
T0099 gi|1174439|sp|P42690|SRK4_SPOLA_59:112 blasting:
T0099 gi|34295|emb|CAA31884.1|_67:119 blasting:
T0099 gi|36808|emb|CAA28691.1|_67:119 blasting:
T0099 gi|109465|pir||S20808_86:141 blasting:
T0099 gi|280989|pir||A43807_70:125 blasting:
T0099 gi|2117800|pir||I48845_67:119 blasting:
T0099 gi|112234|pir||S24547_70:125 blasting:
T0099 gi|57582|emb|CAA44218.1|_61:111 blasting:
T0099 gi|66791|pir||TVFV60_86:141 blasting:
T0099 gi|61504|emb|CAA24496.1|_370:425 blasting:
T0099 gi|125712|sp|P25020|SRC_RSVH1_86:141 blasting:
T0099 gi|628312|pir||S26420_86:141 blasting:
T0099 gi|125714|sp|P00524|SRC_RSVSR_86:141 blasting:
T0099 gi|462444|sp|Q05876|FYN_CHICK_87:142 blasting:
T0099 gi|63363|emb|CAA31595.1|_94:149 blasting:
T0099 gi|125869|sp|P09324|YES_CHICK_94:149 blasting:
T0099 gi|462471|sp|Q02977|YRK_CHICK_86:141 blasting:
T0099 gi|125372|sp|P27446|FYN_XIPHE_87:142 blasting:
T0099 gi|125872|sp|P27447|YES_XIPHE_97:152 blasting:
T0099 gi|125371|sp|P13406|FYN_XENLA_87:142 blasting:
T0099 gi|125871|sp|P10936|YES_XENLA_90:145 blasting:
T0099 gi|65305|emb|CAA45924.1|_80:135 blasting:
T0099 gi|66784|pir||TVHUSR_87:142 blasting:
T0099 gi|125717|sp|P17713|STK_HYDAT_64:116 blasting:
T0099 gi|125474|sp|P06239|LCK_HUMAN_67:119 blasting:
T0099 gi|125706|sp|P15054|SRC_AVIS2_86:141 blasting:
T0099 gi|125713|sp|P00526|SRC_RSVP_86:141 blasting:
T0099 gi|125709|sp|P14085|SRC_AVIST_86:141 blasting:
T0099 gi|125708|sp|P14084|SRC_AVISS_86:141 blasting:
T0099 gi|66797|pir||TVFVG9_86:141 blasting:
T0099 gi|125133|sp|P00522|ABL_DROME_209:260 blasting:
T0099 gi|71608|pir||MWAXIB_1097:1144 blasting:
T0099 gi|77260|pir||S15582_86:141 blasting:
T0099 gi|90368|pir||B24773_60:110 blasting:
T0099 gi|90369|pir||C24773_61:111 blasting:
T0099 gi|90370|pir||D24773_85:135 blasting:
T0099 gi|125475|sp|P06240|LCK_MOUSE_67:119 blasting:
T0099 gi|125703|sp|P13115|SRC1_XENLA_85:140 blasting:
T0099 gi|125705|sp|P13116|SRC2_XENLA_85:140 blasting:
T0099 gi|110658|pir||A39719_69:119 blasting:
T0099 gi|125702|sp|P00528|SRC1_DROME_101:152 blasting:
T0099 gi|125707|sp|P00525|SRC_AVISR_86:141 blasting:
T0099 gi|134425|sp|P29355|SEM5_CAEEL_2:57 blasting:
T0099 gi|1171093|sp|P19706|MYSB_ACACA_1097:1144 blasting:
T0099 gi|179385|gb|AAA35593.1|_64:114 blasting:
T0099 gi|179750|gb|AAA51896.1|_39:89 blasting:
T0099 gi|180639|gb|AAA35697.1|_76:126 blasting:
T0099 gi|2117805|pir||I53715_48:98 blasting:
T0099 gi|191559|gb|AAA37135.1|_66:116 blasting:
T0099 gi|191561|gb|AAA37136.1|_60:110 blasting:
T0099 gi|191563|gb|AAA37137.1|_61:111 blasting:
T0099 gi|191565|gb|AAA37138.1|_85:135 blasting:
T0099 gi|198941|gb|AAA39471.1|_69:119 blasting:
T0099 gi|198943|gb|AAA39472.1|_48:98 blasting:
T0099 gi|210226|gb|AAA42573.1|_86:141 blasting:
T0099 gi|210247|gb|AAA42581.1|_90:138 blasting:
T0099 gi|210271|gb|AAA42585.1|_86:141 blasting:
T0099 gi|212706|gb|AAA49078.1|_86:141 blasting:
T0099 gi|212713|gb|AAA49081.1|_14:64 blasting:
T0099 gi|221014|dbj|BAA01500.1|_86:141 blasting:
T0099 gi|223452|prf||0806225A_370:425 blasting:
T0099 gi|223627|prf||0903255A_332:387 blasting:
T0099 gi|224525|prf||1107272A_115:164 blasting:
T0099 gi|249851|gb|AAB96845.1|_86:141 blasting:
T0099 gi|251793|gb|AAB22579.1|_59:112 blasting:
T0099 gi|400155|sp|P31693|SRC_RSVPA_90:138 blasting:
T0099 gi|7434383|pir||I67811_69:119 blasting:
T0099 gi|7434384|pir||I67812_48:98 blasting:
T0099 gi|2507209|sp|Q07014|LYN_RAT_69:119 blasting:
T0099 gi|729629|sp|Q07883|GRB2_CHICK_2:53 blasting:
T0099 gi|2144421|pir||TVHUHC_63:116 blasting:
T0099 gi|321075|pir||A45501_90:145 blasting:
T0099 gi|346653|pir||B45184_220:273 blasting:
T0099 gi|347052|gb|AAC37877.1|_86:141 blasting:
T0099 gi|420220|pir||JU0228_184:233 blasting:
T0099 gi|423455|pir||A46243_166:218 blasting:
T0099 gi|423549|pir||JN0471_222:275 blasting:
T0099 gi|443263|pdb|1SHF|A_4:59 blasting:
T0099 gi|2194099|pdb|1AEY|_10:58 blasting:
T0099 gi|460966|gb|AAA18225.1|_67:119 blasting:
T0099 gi|479367|pir||S33568_87:142 blasting:
T0099 gi|498178|gb|AAC37549.1|_2:53 blasting:
T0099 gi|1171094|sp|P42522|MYSC_DICDI_1126:1178 blasting:
T0099 gi|553223|gb|AAA35679.1|_82:137 blasting:
T0099 gi|554598|gb|AAA42570.1|_86:141 blasting:
T0099 gi|554599|gb|AAA42571.1|_86:141 blasting:
T0099 gi|555875|gb|AAB60448.1|_60:110 blasting:
T0099 gi|555876|gb|AAB60449.1|_85:135 blasting:
T0099 gi|555877|gb|AAB60450.1|_61:111 blasting:
T0099 gi|555878|gb|AAB60451.1|_66:116 blasting:
T0099 gi|2117817|pir||I39457_220:273 blasting:
T0099 gi|576073|pdb|1CSK|A_13:69 blasting:
T0099 gi|999679|pdb|1PRL|C_10:62 blasting:
T0099 gi|2507603|sp|P35991|BTK_MOUSE_220:273 blasting:
T0099 gi|625219|pir||TVHUSC_89:150 blasting:
T0099 gi|625220|pir||TVCHS_86:141 blasting:
T0099 gi|640062|pdb|1HSQ|_11:59 blasting:
T0099 gi|1072767|pir||S52313_106:161 blasting:
T0099 gi|1072768|pir||S52314_106:161 blasting:
T0099 gi|732528|gb|AAC50116.1|_47:106 blasting:
T0099 gi|2117803|pir||I48608_54:113 blasting:
T0099 gi|775208|gb|AAC50287.1|_67:119 blasting:
T0099 gi|802051|gb|AAB33113.1|_87:142 blasting:
T0099 gi|901820|gb|AAA70194.1|_86:141 blasting:
T0099 gi|914204|gb|AAB33265.1|_64:117 blasting:
T0099 gi|914957|dbj|BAA08645.1|_2:53 blasting:
T0099 gi|914961|dbj|BAA08646.1|_2:53 blasting:
T0099 gi|939625|gb|AAC52725.1|_48:107 blasting:
T0099 gi|6686295|sp|Q02779|M3KA_HUMAN_23:77 blasting:
T0099 gi|999906|pdb|1GBR|A_11:62 blasting:
T0099 gi|7511162|pir||T27877_4:55 blasting:
T0099 gi|7511162|pir||T27877_217:268 blasting:
T0099 gi|1064965|pdb|1CKA|A_2:54 blasting:
T0099 gi|1071850|pir||A39939_65:115 blasting:
T0099 gi|1170188|sp|P08631|HCK_HUMAN_84:137 blasting:
T0099 gi|1170189|sp|P08103|HCK_MOUSE_82:132 blasting:
T0099 gi|1170731|sp|P42683|LCK_CHICK_66:116 blasting:
T0099 gi|1174631|sp|P24604|TEC_MOUSE_184:233 blasting:
T0099 gi|1311313|pdb|1LCK|A_16:68 blasting:
T0099 gi|1311410|pdb|1ABO|A_7:57 blasting:
T0099 gi|1351818|sp|P00527|YES_AVISY_86:141 blasting:
T0099 gi|1362664|pir||B49114_89:144 blasting:
T0099 gi|1362665|pir||A49114_92:147 blasting:
T0099 gi|1363239|pir||A57152_25:78 blasting:
T0099 gi|1373390|gb|AAB05596.1|_192:243 blasting:
T0099 gi|1375041|dbj|BAA12862.1|_2:53 blasting:
T0099 gi|1942473|pdb|1NLO|C_10:62 blasting:
T0099 gi|2498936|sp|Q15811|ITSN_HUMAN_459:509 blasting:
T0099 gi|1438935|gb|AAC50593.1|_41:90 blasting:
T0099 gi|1438935|gb|AAC50593.1|_187:237 blasting:
T0099 gi|3025159|sp|Q28923|YES_CANFA_92:147 blasting:
T0099 gi|1536790|dbj|BAA07705.1|_68:120 blasting:
T0099 gi|2499805|sp|P55345|ANM2_HUMAN_34:84 blasting:
T0099 gi|6175046|sp|P00523|SRC_CHICK_86:141 blasting:
T0099 gi|1710263|gb|AAB50221.1|_34:84 blasting:
T0099 gi|1816662|gb|AAC60143.1|_197:247 blasting:
T0099 gi|1816662|gb|AAC60143.1|_9:57 blasting:
T0099 gi|3913784|sp|P87379|GRB2_XENLA_2:53 blasting:
T0099 gi|1913783|dbj|BAA18950.1|_110:158 blasting:
T0099 gi|1942719|pdb|1EFN|C_3:58 blasting:
T0099 gi|2982073|pdb|1AZG|B_6:61 blasting:
T0099 gi|1943539|pdb|1FYN|A_7:62 blasting:
T0099 gi|2105002|gb|AAB71345.1|_48:98 blasting:
T0099 gi|2114076|dbj|BAA20078.1|_45:95 blasting:
T0099 gi|2114412|gb|AAC47535.1|_1000:1046 blasting:
T0099 gi|2194103|pdb|1AD5|A_6:59 blasting:
T0099 gi|5822499|pdb|2SRC|_5:60 blasting:
T0099 gi|7513197|pir||T08855_154:205 blasting:
T0099 gi|2507208|sp|P25911|LYN_MOUSE_69:119 blasting:
T0099 gi|2554681|pdb|2ABL|_11:61 blasting:
T0099 gi|7512152|pir||T09194_990:1039 blasting:
T0099 gi|7512152|pir||T09194_1143:1193 blasting:
T0099 gi|2695869|emb|CAB05103.1|_2:51 blasting:
T0099 gi|2723311|dbj|BAA24063.1|_165:214 blasting:
T0099 gi|2723313|dbj|BAA24064.1|_348:397 blasting:
T0099 gi|2738777|gb|AAB94550.1|_12:71 blasting:
T0099 gi|2780916|pdb|2PTK|_6:61 blasting:
T0099 gi|2827464|gb|AAB99858.1|_150:199 blasting:
T0099 gi|2914378|pdb|1AWO|_8:58 blasting:
T0099 gi|2921549|gb|AAD11958.1|_344:394 blasting:
T0099 gi|2921551|gb|AAD11959.1|_363:413 blasting:
T0099 gi|2967840|gb|AAC05835.1|_13:69 blasting:
T0099 gi|2982012|pdb|1A0N|B_8:63 blasting:
T0099 gi|7511852|pir||T13053_781:833 blasting:
T0099 gi|7511851|pir||T13055_781:833 blasting:
T0099 gi|3003004|gb|AAC08990.1|_86:141 blasting:
T0099 gi|3114379|pdb|1AWW|_12:65 blasting:
T0099 gi|3114543|pdb|1AVZ|C_3:55 blasting:
T0099 gi|3318781|pdb|4HCK|_13:66 blasting:
T0099 gi|3411274|gb|AAC31209.1|_57:107 blasting:
T0099 gi|3560565|gb|AAC35011.1|_26:79 blasting:
T0099 gi|7494125|pir||T32734_1166:1212 blasting:
T0099 gi|3721908|dbj|BAA33741.1|_69:121 blasting:
T0099 gi|3859853|gb|AAC78610.1|_1159:1209 blasting:
T0099 gi|3859853|gb|AAC78610.1|_1006:1055 blasting:
T0099 gi|3891430|pdb|1BU1|A_4:57 blasting:
T0099 gi|3930217|gb|AAC80284.1|_203:252 blasting:
T0099 gi|3930217|gb|AAC80284.1|_8:56 blasting:
T0099 gi|4033555|emb|CAA10376.1|_164:214 blasting:
T0099 gi|4033557|emb|CAA10377.1|_139:189 blasting:
T0099 gi|4100623|gb|AAD00899.1|_164:213 blasting:
T0099 gi|4100623|gb|AAD00899.1|_310:360 blasting:
T0099 gi|4138839|gb|AAD03595.1|_669:717 blasting:
T0099 gi|4139932|pdb|1BBZ|C_3:53 blasting:
T0099 gi|4139934|pdb|1BBZ|E_3:53 blasting:
T0099 gi|4151946|gb|AAD04633.1|_191:241 blasting:
T0099 gi|4249651|gb|AAD13752.1|_197:247 blasting:
T0099 gi|4249651|gb|AAD13752.1|_8:56 blasting:
T0099 gi|4249651|gb|AAD13752.1|_115:160 blasting:
T0099 gi|4378885|gb|AAD19746.1|_1152:1202 blasting:
T0099 gi|4378885|gb|AAD19746.1|_999:1048 blasting:
T0099 gi|4558122|pdb|1BK2|_5:53 blasting:
T0099 gi|8134704|sp|Q9WUD9|SRC_RAT_89:141 blasting:
T0099 gi|4731289|gb|AAD28428.1|AF112976_1_112:161 blasting:
T0099 gi|4808823|gb|AAD29952.1|AF114487_1_1159:1209 blasting:
T0099 gi|4808823|gb|AAD29952.1|AF114487_1_1006:1055 blasting:
T0099 gi|4808825|gb|AAD29953.1|AF114488_1_1159:1209 blasting:
T0099 gi|4808825|gb|AAD29953.1|AF114488_1_1006:1055 blasting:
T0099 gi|4835853|gb|AAD30271.1|AF127798_1_1156:1206 blasting:
T0099 gi|4835853|gb|AAD30271.1|AF127798_1_1003:1052 blasting:
T0099 gi|4838526|gb|AAD31026.1|AF132672_1_1085:1135 blasting:
T0099 gi|5107454|pdb|1AZE|A_2:53 blasting:
T0099 gi|5107624|pdb|1PWT|_9:57 blasting:
T0099 gi|5262742|emb|CAB45687.1|_160:209 blasting:
T0099 gi|7492740|pir||T39427_1111:1160 blasting:
T0099 gi|5453029|gb|AAD43402.1|_184:233 blasting:
T0099 gi|5453032|gb|AAD43405.1|_184:233 blasting:
T0099 gi|5542349|pdb|1QCF|A_12:65 blasting:
T0099 gi|5578991|emb|CAB51395.1|_282:335 blasting:
T0099 gi|5731279|gb|AAD48847.1|AF169620_1_46:96 blasting:
T0099 gi|5731281|gb|AAD48848.1|AF169621_1_187:237 blasting:
T0099 gi|5731281|gb|AAD48848.1|AF169621_1_34:83 blasting:
T0099 gi|5823552|gb|AAD53183.1|AF180522_1_126:176 blasting:
T0099 gi|5853151|gb|AAD54337.1|AF177536_1_44:95 blasting:
T0099 gi|6006522|emb|CAA36457.2|_82:137 blasting:
T0099 gi|6103277|emb|CAB59279.1|_2:53 blasting:
T0099 gi|6651025|gb|AAF22134.1|AF127180_1_160:210 blasting:
T0099 gi|6651163|gb|AAF22211.1|AF139492_1_435:488 blasting:
T0099 gi|6651165|gb|AAF22212.1|AF139493_1_394:447 blasting:
T0099 gi|6651167|gb|AAF22213.1|AF139494_1_433:486 blasting:
T0099 gi|6651169|gb|AAF22214.1|AF139495_1_392:445 blasting:
T0099 gi|6729971|pdb|1B07|A_4:56 blasting:
T0099 gi|6730486|pdb|1QLY|A_5:58 blasting:
T0099 gi|6969624|gb|AAF33845.1|AF226866_1_122:171 blasting:
T0099 gi|6984209|gb|AAF34794.1|AF228313_1_54:106 blasting:
T0099 gi|7160701|emb|CAB04427.2|_62:114 blasting:
T0099 gi|7271012|emb|CAB77642.1|_315:368 blasting:
T0099 gi|7292519|gb|AAF47922.1|_101:152 blasting:
T0099 gi|7294076|gb|AAF49431.1|_192:243 blasting:
T0099 gi|7294985|gb|AAF50313.1|_549:598 blasting:
T0099 gi|7296156|gb|AAF51449.1|_330:381 blasting:
T0099 gi|7298751|gb|AAF53962.1|_784:836 blasting:
T0099 gi|7302199|gb|AAF57295.1|_68:120 blasting:
T0099 gi|7303067|gb|AAF58135.1|_168:216 blasting:
T0099 gi|7329078|gb|AAF59904.1|AF182199_1_984:1033 blasting:
T0099 gi|7329078|gb|AAF59904.1|AF182199_1_1130:1180 blasting:
T0099 gi|7331201|gb|AAF60319.1|AF236119_1_2:51 blasting:
T0099 gi|7503796|pir||T22405_62:114 blasting:
T0099 gi|7573534|emb|CAB87592.1|_47:106 blasting:
T0099 gi|7578848|gb|AAF64151.1|AF232691_1_117:169 blasting:
T0099 gi|7688244|emb|CAB89868.1|_300:349 blasting:
make[1]: Leaving directory `/auto/projects/compbio/experiments/casp4/t99'
make -k T0099.t2k.a2m.gz	\
	T0099.t2k.pa \
	T0099.t2k.pa.html \
	T0099.t2k.2d \
	T0099.t2k.tree \
	T0099.t2k_sorted.pa \
	T0099.t2k.tree.ps \
	T0099.t2k.tree-unroot.ps 
make[1]: Entering directory `/auto/projects/compbio/experiments/casp4/t99'
/projects/compbio/experiments/models.97/scripts2k/target2k -out T0099.t2k \
	-seed T0099.seq \
	-all


@@@@ chgrp protein /projects/compbio/tmp/target2k-titanic-29378


@@@@ cp /projects/compbio/experiments/casp4/t99/T0099.seq m0.a2m


@@@@ checkseq foo -alphabet protein -db m0.a2m > init.check
SAM: checkseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:44
# About to count sequences in /projects/compbio/data/nrp/nr
/projects/compbio/experiments/models.97/scripts2k/target2k: E-value thresholds used are
prefilter: 0.01,	actual: 0.0001
prefilter: 1,	actual: 0.0002
prefilter: 10,	actual: 0.001
prefilter: 400,	actual: 0.005
/projects/compbio/experiments/models.97/scripts2k/target2k: aweight_bits are 0.8, 0.7, 0.6, 0.5
/projects/compbio/experiments/models.97/scripts2k/target2k: db_size= 509169 reverse_diff= 4
/projects/compbio/experiments/models.97/scripts2k/target2k: blast_max_report= 20000
/projects/compbio/experiments/models.97/scripts2k/target2k: db=/projects/compbio/data/nrp/nr
/projects/compbio/experiments/models.97/scripts2k/target2k: aweight_method=1 aweight_exponent=10
/projects/compbio/experiments/models.97/scripts2k/target2k: force_seed=1 constraints=1
/projects/compbio/experiments/models.97/scripts2k/target2k: jump_in=0.2 jump_out=1 fimstrength=1 fimtrans=-1


@@@@ blast-prefilter -out prefilter -seed m0.a2m  -prefilter_thresholds 0.01,1,10,400  -db /projects/compbio/data/nrp/nr -blast_max_report 20000


@@@@ chgrp protein /projects/compbio/tmp/blast-prefilter-titanic-29452
/projects/compbio/experiments/models.97/scripts2k/blast-prefilter: E-value thresholds used are
For /projects/compbio/tmp/target2k-titanic-29378/prefilter_1.fa,  0.01
For /projects/compbio/tmp/target2k-titanic-29378/prefilter_2.fa,  1
For /projects/compbio/tmp/target2k-titanic-29378/prefilter_3.fa,  10
For /projects/compbio/tmp/target2k-titanic-29378/prefilter_4.fa,  400

/projects/compbio/experiments/models.97/scripts2k/blast-prefilter: db=/projects/compbio/data/nrp/nr


@@@@ uniqueseq init -alignfile /projects/compbio/tmp/target2k-titanic-29378/m0.a2m -a protein -a2mdots 0
SAM: uniqueseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:50
Reading alignment file /projects/compbio/tmp/target2k-titanic-29378/m0.a2m (1 sequences, 56 columns) as A2M alignment.
Writing sequence output to init.a2m.
No sequences have been droppd.


@@@@ /projects/compbio/bin/wu-blastp /projects/compbio/data/nrp/nr 1.fasta  E=400 V=20000 B=0 -gi > 1.fasta-blast.out
Searched 509169 sequences
# parsing wu-blastp output


@@@@ rm -f 1.fasta < /dev/null


@@@@ rm -f 1.fasta-blast.out < /dev/null
# Extracting hits in FASTA format from /projects/compbio/data/nrp/nr


@@@@ rm -rf /projects/compbio/tmp/blast-prefilter-titanic-29452 < /dev/null


@@@@ modelfromalign unused -alignfile m0.a2m \
             -constraints_from_align 1 -constraints_out m0.cst
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file m0.a2m (1 sequences, 56 columns) as A2M alignment.
# About to count sequences in m0.a2m
# About to count sequences in prefilter_1.fa


@@@@ modelfromalign tmp_1-a -alignfile m0.a2m \
		-insert /projects/compbio/lib/gap1.5.regularizer \
		-aweight_bits 0.8\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints m0.cst -constraints_out tmp_1-a.cst
Reading parameter file /projects/compbio/lib/gap1.5.regularizer
/projects/compbio/lib/gap1.5.regularizer(1):  Reading REGULARIZER: gap1.5.  Weak regularizer, gaps average 1.5, matches average 10
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file m0.a2m (1 sequences, 56 columns) as A2M alignment.


@@@@ hmmscore tmp_1-a -i tmp_1-a.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-simple_threshold -26.3508756357805 -Emax 0.0001 \
    	-adpstyle 1 \
	-align_short 0	-mdEmax 0.0001\
	-select_score 4 \
	-select_seq 4 \
	 -select_mdalign 4 -select_md 4 -Motifcutoff 0.357142857142857 -db prefilter_1.fa -constraints tmp_1-a.cst -constraints_out tmp_1-a-md.cst
Reading parameter file tmp_1-a.mod
tmp_1-a.mod(23):  Reading MODEL --  Model from alignment file m0.a2m
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -32.422516
Database has 513 sequences with 298565 residues.


@@@@ sortseq tmp_1-a-sort -alignfile tmp_1-a.mult \
    		-NLLfile tmp_1-a.mstat -a2mdots 0
SAM: sortseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:38
Reading alignment file tmp_1-a.mult (183 sequences, 56 columns) as A2M alignment.
Reading scores from file tmp_1-a.mstat
Writing sequence output to tmp_1-a-sort.a2m.


@@@@ cat m0.a2m tmp_1-a-sort.a2m > tmp_1-a.train.seq


@@@@ cat m0.cst tmp_1-a-md.cst > tmp_1-a.train.cst
# About to count sequences in tmp_1-a.train.seq
# num_seqs=184 nll_thresh=-22.3508756357805 frac_id=0.816906638443881


@@@@ uniqueseq thinned_tmp -alignfile tmp_1-a.train.seq -a protein \
        -percent_id 0.816906638443881 -a2mdots 0
SAM: uniqueseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:50
Reading alignment file tmp_1-a.train.seq (184 sequences, 56 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 93 (of 184) duplicate sequences with differing IDs
Dropping 50 (of 184) sequences with > 81.7% id
41 sequences left after dropping 143 of 184 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_1-a.train.seq \
		-aweight_bits 0.8\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file tmp_1-a.train.seq (41 sequences, 56 columns) as A2M alignment.


@@@@ buildmodel tmp_1-b -insert tmp_1-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_1-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/gap1.5.regularizer -sequence_weights tmp_1-a.w -constraints tmp_1-a.train.cst
Reading parameter file tmp_1-a.mod
tmp_1-a.mod(23):  Reading MODEL --  Model from alignment file m0.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/gap1.5.regularizer
/projects/compbio/lib/gap1.5.regularizer(1):  Reading REGULARIZER: gap1.5.  Weak regularizer, gaps average 1.5, matches average 10
SAM: buildmodel v3.1b (February 24, 1999) compiled 04/18/00_11:43:59
-154.88  -44.17  -58.52  16.42  7 0 57 


@@@@ hmmscore tmp_1-b -i tmp_1-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-db m0.a2m -db tmp_1-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -26.3508756357805 -Emax 0.0001 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.357142857142857 \
	-align_short 5	-mdEmax 0.0001 -constraints tmp_1-a.train.cst -constraints_out /projects/compbio/experiments/casp4/t99/T0099.t2k_1.cst
Reading parameter file tmp_1-b.mod
tmp_1-b.mod(20):  Reading MODEL --  Final model for run tmp_1-b
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -59.023819
Database has 228 sequences with 116650 residues.


@@@@ cp -f tmp_1-b.mult /projects/compbio/experiments/casp4/t99/T0099.t2k_1.a2m
# About to count sequences in prefilter_2.fa


@@@@ modelfromalign tmp_2-a -alignfile /projects/compbio/experiments/casp4/t99/T0099.t2k_1.a2m \
		-insert /projects/compbio/lib/stiff-gap5.regularizer \
		-aweight_bits 0.7\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints /projects/compbio/experiments/casp4/t99/T0099.t2k_1.cst -constraints_out tmp_2-a.cst
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_1.a2m (295 sequences, 56 columns) as A2M alignment.


@@@@ hmmscore tmp_2-a -i tmp_2-a.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-simple_threshold -25.6577284550241 -Emax 0.0002 \
    	-adpstyle 1 \
	-align_short 0	-mdEmax 0.0002\
	-select_score 4 \
	-select_seq 4 \
	 -select_mdalign 4 -select_md 4 -Motifcutoff 0.357142857142857 -db prefilter_2.fa -constraints tmp_2-a.cst -constraints_out tmp_2-a-md.cst
Reading parameter file tmp_2-a.mod
tmp_2-a.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_1.a2m
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -44.341564
Database has 728 sequences with 466873 residues.


@@@@ sortseq tmp_2-a-sort -alignfile tmp_2-a.mult \
    		-NLLfile tmp_2-a.mstat -a2mdots 0
SAM: sortseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:38
Reading alignment file tmp_2-a.mult (891 sequences, 56 columns) as A2M alignment.
Reading scores from file tmp_2-a.mstat
Writing sequence output to tmp_2-a-sort.a2m.


@@@@ cat m0.a2m tmp_2-a-sort.a2m > tmp_2-a.train.seq


@@@@ cat m0.cst tmp_2-a-md.cst > tmp_2-a.train.cst
# About to count sequences in tmp_2-a.train.seq
# num_seqs=892 nll_thresh=-21.6577284550241 frac_id=0.648322769864098


@@@@ uniqueseq thinned_tmp -alignfile tmp_2-a.train.seq -a protein \
        -percent_id 0.648322769864098 -a2mdots 0
SAM: uniqueseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:50
Reading alignment file tmp_2-a.train.seq (892 sequences, 56 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 402 (of 892) duplicate sequences with differing IDs
Dropping 276 (of 892) sequences with > 64.8% id
214 sequences left after dropping 678 of 892 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_2-a.train.seq \
		-aweight_bits 0.7\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file tmp_2-a.train.seq (214 sequences, 56 columns) as A2M alignment.


@@@@ buildmodel tmp_2-b -insert tmp_2-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_2-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/stiff-gap5.regularizer -sequence_weights tmp_2-a.w -constraints tmp_2-a.train.cst
Reading parameter file tmp_2-a.mod
tmp_2-a.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_1.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: buildmodel v3.1b (February 24, 1999) compiled 04/18/00_11:43:59
-154.77  -32.43  -42.85   9.14  4 0 57 


@@@@ hmmscore tmp_2-b -i tmp_2-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-db m0.a2m -db tmp_2-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -25.6577284550241 -Emax 0.0002 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.357142857142857 \
	-align_short 5	-mdEmax 0.0002 -constraints tmp_2-a.train.cst -constraints_out /projects/compbio/experiments/casp4/t99/T0099.t2k_2.cst
Reading parameter file tmp_2-b.mod
tmp_2-b.mod(20):  Reading MODEL --  Final model for run tmp_2-b
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -45.917561
Database has 692 sequences with 428657 residues.


@@@@ cp -f tmp_2-b.mult /projects/compbio/experiments/casp4/t99/T0099.t2k_2.a2m
# About to count sequences in prefilter_3.fa


@@@@ modelfromalign tmp_3-a -alignfile /projects/compbio/experiments/casp4/t99/T0099.t2k_2.a2m \
		-insert /projects/compbio/lib/stiff-gap5.regularizer \
		-aweight_bits 0.6\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints /projects/compbio/experiments/casp4/t99/T0099.t2k_2.cst -constraints_out tmp_3-a.cst
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_2.a2m (912 sequences, 56 columns) as A2M alignment.


@@@@ hmmscore tmp_3-a -i tmp_3-a.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-simple_threshold -24.0482905410188 -Emax 0.001 \
    	-adpstyle 1 \
	-align_short 0	-mdEmax 0.001\
	-select_score 4 \
	-select_seq 4 \
	 -select_mdalign 4 -select_md 4 -Motifcutoff 0.357142857142857 -db prefilter_3.fa -constraints tmp_3-a.cst -constraints_out tmp_3-a-md.cst
Reading parameter file tmp_3-a.mod
tmp_3-a.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_2.a2m
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -37.048569
Database has 954 sequences with 578210 residues.


@@@@ sortseq tmp_3-a-sort -alignfile tmp_3-a.mult \
    		-NLLfile tmp_3-a.mstat -a2mdots 0
SAM: sortseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:38
Reading alignment file tmp_3-a.mult (984 sequences, 56 columns) as A2M alignment.
Reading scores from file tmp_3-a.mstat
Writing sequence output to tmp_3-a-sort.a2m.


@@@@ cat m0.a2m tmp_3-a-sort.a2m > tmp_3-a.train.seq


@@@@ cat m0.cst tmp_3-a-md.cst > tmp_3-a.train.cst
# About to count sequences in tmp_3-a.train.seq
# num_seqs=985 nll_thresh=-20.0482905410188 frac_id=0.64056723767318


@@@@ uniqueseq thinned_tmp -alignfile tmp_3-a.train.seq -a protein \
        -percent_id 0.64056723767318 -a2mdots 0
SAM: uniqueseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:50
Reading alignment file tmp_3-a.train.seq (985 sequences, 56 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 431 (of 985) duplicate sequences with differing IDs
Dropping 302 (of 985) sequences with > 64.1% id
252 sequences left after dropping 733 of 985 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_3-a.train.seq \
		-aweight_bits 0.6\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file tmp_3-a.train.seq (252 sequences, 56 columns) as A2M alignment.


@@@@ buildmodel tmp_3-b -insert tmp_3-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_3-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/stiff-gap5.regularizer -sequence_weights tmp_3-a.w -constraints tmp_3-a.train.cst
Reading parameter file tmp_3-a.mod
tmp_3-a.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_2.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/stiff-gap5.regularizer
/projects/compbio/lib/stiff-gap5.regularizer(1):  Reading REGULARIZER: gap5.  stiff regularizer, gaps averge 5, matches average 10
SAM: buildmodel v3.1b (February 24, 1999) compiled 04/18/00_11:43:59
-154.96  -24.63  -38.65   9.05  2 0 57 


@@@@ hmmscore tmp_3-b -i tmp_3-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-db m0.a2m -db tmp_3-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -24.0482905410188 -Emax 0.001 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.357142857142857 \
	-align_short 5	-mdEmax 0.001 -constraints tmp_3-a.train.cst -constraints_out /projects/compbio/experiments/casp4/t99/T0099.t2k_3.cst
Reading parameter file tmp_3-b.mod
tmp_3-b.mod(20):  Reading MODEL --  Final model for run tmp_3-b
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.057308
Database has 761 sequences with 501680 residues.


@@@@ cp -f tmp_3-b.mult /projects/compbio/experiments/casp4/t99/T0099.t2k_3.a2m
# About to count sequences in prefilter_4.fa


@@@@ modelfromalign tmp_4-a -alignfile /projects/compbio/experiments/casp4/t99/T0099.t2k_3.a2m \
		-insert /projects/compbio/lib/fssp-trained.regularizer \
		-aweight_bits 0.5\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints /projects/compbio/experiments/casp4/t99/T0099.t2k_3.cst -constraints_out tmp_4-a.cst
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_3.a2m (987 sequences, 56 columns) as A2M alignment.


@@@@ hmmscore tmp_4-a -i tmp_4-a.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-simple_threshold -22.4388526207288 -Emax 0.005 \
    	-adpstyle 1 \
	-align_short 0	-mdEmax 0.005\
	-select_score 4 \
	-select_seq 4 \
	 -select_mdalign 4 -select_md 4 -Motifcutoff 0.357142857142857 -db prefilter_4.fa -constraints tmp_4-a.cst -constraints_out tmp_4-a-md.cst
Reading parameter file tmp_4-a.mod
tmp_4-a.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_3.a2m
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.....
Average NLL-Simple NULL score:        -12.988875
Database has 4827 sequences with 1895713 residues.


@@@@ sortseq tmp_4-a-sort -alignfile tmp_4-a.mult \
    		-NLLfile tmp_4-a.mstat -a2mdots 0
SAM: sortseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:38
Reading alignment file tmp_4-a.mult (1023 sequences, 56 columns) as A2M alignment.
Reading scores from file tmp_4-a.mstat
Writing sequence output to tmp_4-a-sort.a2m.


@@@@ cat m0.a2m tmp_4-a-sort.a2m > tmp_4-a.train.seq


@@@@ cat m0.cst tmp_4-a-md.cst > tmp_4-a.train.cst
# About to count sequences in tmp_4-a.train.seq
# num_seqs=1024 nll_thresh=-18.4388526207288 frac_id=0.635916390055988


@@@@ uniqueseq thinned_tmp -alignfile tmp_4-a.train.seq -a protein \
        -percent_id 0.635916390055988 -a2mdots 0
SAM: uniqueseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:50
Reading alignment file tmp_4-a.train.seq (1024 sequences, 56 columns) as A2M alignment.
Writing sequence output to thinned_tmp.a2m.
Dropping 450 (of 1024) duplicate sequences with differing IDs
Dropping 310 (of 1024) sequences with > 63.6% id
264 sequences left after dropping 760 of 1024 sequences.


@@@@ modelfromalign junk_for_weights \
    		-alignfile tmp_4-a.train.seq \
		-aweight_bits 0.5\
    		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file tmp_4-a.train.seq (264 sequences, 56 columns) as A2M alignment.


@@@@ buildmodel tmp_4-b -insert tmp_4-a.mod\
	 -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
	    -modellength 0 \
	    -internal_weight 0 \
	    -anneal_length 2 \
	    -many_files 1 \
	    -Nseq 20000\
	    -nsurgery 0 \
	    -fracinsert 0.2 \
	    -cutinsert 0.25 -cutmatch 0.2 -initial_noise 0.0001 -anneal_noise 0.000001 \
	    	-internal_weight 0 \
		-train tmp_4-a.train.seq \
		-nmodels 1\
		-insert /projects/compbio/lib/fssp-trained.regularizer -sequence_weights tmp_4-a.w -constraints tmp_4-a.train.cst
Reading parameter file tmp_4-a.mod
tmp_4-a.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_3.a2m
Command line option(48): internal_weight has already been set. Using 0.
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: buildmodel v3.1b (February 24, 1999) compiled 04/18/00_11:43:59
-155.36  -24.35  -38.18   9.10  4 0 57 


@@@@ hmmscore tmp_4-b -i tmp_4-b.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-db m0.a2m -db tmp_4-a.sel \
	-select_score 4 \
	-select_seq 4 \
	-simple_threshold -22.4388526207288 -Emax 0.005 \
	-select_mdalign 4 -select_md 4 \
	-adpstyle 1 \
	-Motifcutoff 0.357142857142857 \
	-align_short 5	-mdEmax 0.005 -constraints tmp_4-a.train.cst -constraints_out /projects/compbio/experiments/casp4/t99/T0099.t2k_4.cst
Reading parameter file tmp_4-b.mod
tmp_4-b.mod(20):  Reading MODEL --  Final model for run tmp_4-b
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -40.000755
Database has 813 sequences with 542870 residues.


@@@@ cp -f tmp_4-b.mult /projects/compbio/experiments/casp4/t99/T0099.t2k_4.a2m


@@@@ modelfromalign tmp_5-a -alignfile /projects/compbio/experiments/casp4/t99/T0099.t2k_4.a2m \
		-insert /projects/compbio/lib/fssp-trained.regularizer \
		-aweight_bits 0.5\
		-fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1 \
    	-aweight_method 1\
	-aweight_exponent 10 -constraints /projects/compbio/experiments/casp4/t99/T0099.t2k_4.cst -constraints_out tmp_5-a.cst
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_4.a2m (1032 sequences, 56 columns) as A2M alignment.


@@@@ hmmscore tmp_5-a -i tmp_5-a.mod -fimtrans -1\
    	-fimstrength 1\
        -ins_jump_conf 1 \
	-match_jump_conf 1 \
	-del_jump_conf 1 \
	-binary_output 1\
	-prior_library /projects/compbio/lib/recode3.20comp \
	-a2mdots 0 \
	-a protein \
        -sw 2 -jump_in_prob 0.2 -jump_out_prob 1\
    	    -dpstyle 0 \
	    -subtract_null 4 -sort 2 \
	-db_size 509169 \
	-simple_threshold -22.4388526207288 -Emax 0.005 \
    	-adpstyle 5 \
	-align_short 0	-mdEmax 0.005\
	-select_score 4 \
	-select_seq 4 \
	 -select_mdalign 4 -select_md 4 -Motifcutoff 0.357142857142857 -db prefilter_4.fa -constraints tmp_5-a.cst -constraints_out tmp_5-a-md.cst
Reading parameter file tmp_5-a.mod
tmp_5-a.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k_4.a2m
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.....
Average NLL-Simple NULL score:        -13.039355
Database has 4827 sequences with 1895713 residues.


@@@@ sortseq tmp_5-a-sort -alignfile tmp_5-a.mult \
    		-NLLfile tmp_5-a.mstat -a2mdots 0
SAM: sortseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:38
Reading alignment file tmp_5-a.mult (870 sequences, 56 columns) as A2M alignment.
Reading scores from file tmp_5-a.mstat
Writing sequence output to tmp_5-a-sort.a2m.


@@@@ cat m0.a2m tmp_5-a-sort.a2m > tmp_5-a.train.seq


@@@@ cat m0.cst tmp_5-a-md.cst > tmp_5-a.train.cst


@@@@ cp tmp_5-a.train.seq /projects/compbio/experiments/casp4/t99/T0099.t2k.a2m


@@@@ cp tmp_5-a.train.cst /projects/compbio/experiments/casp4/t99/T0099.t2k.cst


@@@@ rm -rf /projects/compbio/tmp/target2k-titanic-29378 < /dev/null
gzip -f T0099.t2k.a2m T0099.t2k_*.a2m
prettyalign T0099.t2k.a2m.gz -m8 -i -n -L3333 > T0099.t2k.pa
SAM: prettyalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:15
gunzip -c T0099.t2k.a2m.gz > tmp.a2m
a2m2html -a2m_in tmp.a2m -retrieve > T0099.t2k.pa.html
SAM: /projects/compbio/bin/alpha/prettyalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:15
rm tmp.a2m
echo ReadNeuralNet /projects/compbio/usr/karplus/predict-2nd/testing/networks/overrep-2500-IDaa13-5-9-7-10-5-10-11-ehl2-seeded4-stride-trained.net > tmp.script
echo ReadA2M T0099.t2k.a2m.gz >> tmp.script
echo PrintPrediction T0099.t2k.2d 3670-4530-6947 >> tmp.script
echo PrintPredictionFasta T0099.t2k.2d.seq >> tmp.script
echo PrintRDB T0099.t2k.2d.rdb >> tmp.script
predict-2nd < tmp.script
# command:# Neural network set to overrep-2500-IDaa13-5-9-7-10-5-10-11-ehl2-seeded4-stride-trained.net
# command:# Reading A2M format from T0099.t2k.a2m.gz
# Using SequenceWeight EntropyWeight(1.4, 10)
# Using regularizer /projects/compbio/lib/recode3.20comp for sequence weight regularizer.
# T0099.t2k.a2m with 871 sequences, total weight= 76.5082 avg weight= 0.0878395 46 iterations
# AdjustWeights couldn't save exactly 1.4 bits/position, saving 1.3988 bits.
Regularizing alignment for T0099.t2k.a2m.gz
# After reading T0099.t2k.a2m.gz, have 56 columns in 1 chains
# command:# Initializing Gain for FinalLayer
# Initializing Gain for ordering_layer
# Initializing Gain for SecondLayer
# Initializing Gain for FirstLayer
# Network initialization done
# Printing prediction to T0099.t2k.2d
# command:# Network initialization done
# Printing prediction  in FASTA format to T0099.t2k.2d.seq
# command:# Network initialization done
# Printing prediction to T0099.t2k.2d.rdb
# command:rm tmp.script
gunzip -f T0099.t2k.a2m.gz
/projects/compbio/usr/karplus/src/phytree/phytree -o -i -r flat T0099.t2k T0099.t2k.a2m /projects/compbio/lib/recode2.20comp
Prior library /projects/compbio/lib/recode2.20comp read.
Reading alignment file T0099.t2k.a2m (871 sequences) as A2M alignment.
Alignment T0099.t2k.a2m read.
Adding sequences:0 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 
One dot for every 10 merges:
.......................................................................................
Merges done.
CPU = user   0: 5:48    system   0: 0: 0
gzip -f T0099.t2k.a2m
gzip -f T0099.t2k_sorted.a2m
rm T0099.t2k.phytrace T0099.t2k.tree_weight
prettyalign T0099.t2k_sorted.a2m.gz -m8 -i -n -L3333 > T0099.t2k_sorted.pa
SAM: prettyalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:15
/projects/compbio/usr/karplus/src/phytree/dg T0099.t2k.tree
/projects/compbio/usr/karplus/src/phytree/dg: 29723 Memory fault
/projects/compbio/usr/karplus/src/phytree/dtree T0099.t2k.tree
/projects/compbio/usr/karplus/src/phytree/dtree: 29567 Memory fault
make[1]: Leaving directory `/auto/projects/compbio/experiments/casp4/t99'
/projects/compbio/experiments/models.97/scripts99/score-target -alignment T0099.t2k.a2m.gz -build w0.5 \
	-db /projects/compbio/data/pdb/all-protein \
	-Emax 40.0 \
	-viterbi 0 -sw_score 2 \
	-output T0099.t2k-w0.5-pdb.rdb
PATH=.:/projects/compbio/experiments/models.97/scripts99:/projects/compbio/bin:/projects/compbio/bin/alpha:/projects/compbio/bin/hmmscripts:/projects/compbio/bin/scripts:/sbin:/usr/sbin:/bin:/usr/bin:/usr/local/gnu/bin:/usr/local/share/request/bin:/usr/local/bin


@@@@ mkdir /projects/compbio/tmp/score-target-29879


@@@@ mkdir /projects/compbio/tmp/score-target-29879/for-scorescript


@@@@ /projects/compbio/experiments/models.97/scripts99/score-mods-vs-seqs.pl -root_tmp /projects/compbio/tmp/score-target-29879/for-scorescript  -a2msfile /projects/compbio/tmp/score-target-29879/score-target.a2m \
        -buildscript /projects/compbio/bin/scripts/w0.5 -seqfile /projects/compbio/data/pdb/all-protein -Emax 40.0 -viterbi 0 \
        -sw_score 2 -output /projects/compbio/tmp/score-target-29879/score-target.op


@@@@ chgrp protein /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp


@@@@ chgrp protein /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp


@@@@ /projects/compbio/bin/scripts/w0.5 /projects/compbio/experiments/casp4/t99/T0099.t2k.a2m.gz /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717/T0099.t2k.mod
Reading /projects/compbio/bin/scripts/sam-t99.conf

@@@@ chgrp protein /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557


@@@@ uniqueseq /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557/tmp -alignfile /projects/compbio/experiments/casp4/t99/T0099.t2k.a2m.gz \
    		-a protein -percent_id 0.8
SAM: uniqueseq v3.1b (February 24, 1999) compiled 04/18/00_11:44:50
Reading alignment file /projects/compbio/experiments/casp4/t99/T0099.t2k.a2m.gz (871 sequences, 56 columns) as A2M alignment.
Writing sequence output to /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557/tmp.a2m.
Dropping 377 (of 871) duplicate sequences with differing IDs
Dropping 215 (of 871) sequences with > 80.0% id
279 sequences left after dropping 592 of 871 sequences.


@@@@ modelfromalign /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557/tmp -alignfile /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557/tmp.a2m \
		-insert /projects/compbio/lib/fssp-trained.regularizer \
		-ins_jump_conf 1 \
		-match_jump_conf 1 \
		-del_jump_conf 1 \
		-prior_library /projects/compbio/lib/recode3.20comp \
		-binary_output 1  -a protein -aweight_method 1 -aweight_bits 0.5 -aweight_exponent 10
Reading parameter file /projects/compbio/lib/fssp-trained.regularizer
/projects/compbio/lib/fssp-trained.regularizer(1):  Reading REGULARIZER: transitions from FSSP and pseudocounts for diverse weighted HSSP
SAM: modelfromalign v3.1b (February 24, 1999) compiled 04/18/00_11:44:13
Reading alignment file /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557/tmp.a2m (279 sequences, 56 columns) as A2M alignment.


@@@@ cp -f /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557/tmp.mod /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717/T0099.t2k.mod


@@@@ rm -rf /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557 </dev/null
Reading /projects/compbio/bin/scripts/sam-t99.conf

@@@@ hmmscore /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717/tmp29717 -i /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717/T0099.t2k.mod -db /projects/compbio/data/pdb/all-protein -SW_score 2 -viterbi 0 -select_score 4 -Emax 40.0
Reading parameter file /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717/T0099.t2k.mod
/projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717/T0099.t2k.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-titanic-29557/tmp.a2m
SAM: hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.......................
Average NLL-Simple NULL score:        -7.917455
Database has 22405 sequences with 4835051 residues.


@@@@ mv /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717/op_temp29717 /projects/compbio/tmp/score-target-29879/score-target.op


@@@@ rsh beta  rm -rf /projects/compbio/tmp/score-target-29879/for-scorescript/split-tmp/titanic-29717 < /dev/null


@@@@ rm -rf /projects/compbio/tmp/score-target-29879
/projects/compbio/bin/scripts/score-lib-t99 \
-targetseq T0099.seq \
-db "PDB and SCOP domains" \
	-evalue 40.0 \
	-hitsout T0099-t99.rdb
Process ID: 29335
Command line args:
targetseq: T0099.seq
targeta2m: 
hitsoutfile: T0099-t99.rdb
evalue: 40.0
db_option_str: PDB and SCOP domains
    db_ids_file: /projects/compbio/experiments/models.97/indexes/t99.ids
    db_seqfiles_list_ref: /projects/compbio/data/pdb/all-protein:/projects/compbio/experiments/test-set/fold-recognition-test/chothia-test/domains/domains.seqs
    db_aligndirs_list_ref: /projects/compbio/experiments/models.97/pdb:/projects/compbio4/experiments/models.97/domains
entering get_template_model_for_db_search: template_id: 2aaa_1
id: 2aaa_1   alignment found: /projects/compbio4/experiments/models.97/domains/2a/2aaa_1/nostruct-align/2aaa_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2a/2aaa_1/nostruct-align/2aaa_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2a/2aaa_1/nostruct-align/2aaa_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13259/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.449661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1abrB_1
id: 1abrB_1   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1abrB_1/nostruct-align/1abrB_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1abrB_1/nostruct-align/1abrB_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1abrB_1/nostruct-align/1abrB_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8127/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.046661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1adn
id: 1adn   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1adn/nostruct-align/1adn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5701/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.095657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1adr
id: 1adr   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1adr/nostruct-align/1adr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.007675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aizA
id: 1aizA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aizA/nostruct-align/1aizA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16671/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.866653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1afp
id: 1afp   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1afp/nostruct-align/1afp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1412/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.163666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ans
id: 1ans   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ans/nostruct-align/1ans.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27342/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.462662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1acp
id: 1acp   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1acp/nostruct-align/1acp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27722/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.447662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aca
id: 1aca   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aca/nostruct-align/1aca.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30976/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.265671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1abrB_2
id: 1abrB_2   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1abrB_2/nostruct-align/1abrB_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1abrB_2/nostruct-align/1abrB_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1abrB_2/nostruct-align/1abrB_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6930/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.284668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 193l
id: 193l   alignment found: /projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/19/193l/nostruct-align/193l.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29135/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.609650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1acf
id: 1acf   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1acf/nostruct-align/1acf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24789/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.575668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1add
id: 1add   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1add/nostruct-align/1add.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26170/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.188660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 119l
id: 119l   alignment found: /projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/11/119l/nostruct-align/119l.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-titanic-28907/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.430649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apa
id: 1apa   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apa/nostruct-align/1apa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-titanic-29216/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.298660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apo
id: 1apo   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apo/nostruct-align/1apo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31402/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.418655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aab
id: 1aab   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aab/nostruct-align/1aab.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24719/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.615662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ard
id: 1ard   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ard/nostruct-align/1ard.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16080/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.216660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aep
id: 1aep   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aep/nostruct-align/1aep.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-titanic-22676/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.041672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aps
id: 1aps   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aps/nostruct-align/1aps.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-26746/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.422653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aba
id: 1aba   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aba/nostruct-align/1aba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14430/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aky
id: 1aky   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aky/nostruct-align/1aky.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-titanic-29691/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.121658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aco_1
id: 1aco_1   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1aco_1/nostruct-align/1aco_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1aco_1/nostruct-align/1aco_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1aco_1/nostruct-align/1aco_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31243/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.046661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aaf
id: 1aaf   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aaf/nostruct-align/1aaf.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-9090/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.080658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gd1O_1
id: 1gd1O_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gd1O_1/nostruct-align/1gd1O_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gd1O_1/nostruct-align/1gd1O_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gd1O_1/nostruct-align/1gd1O_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6794/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.814667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oacA_3
id: 1oacA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1oacA_3/nostruct-align/1oacA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1oacA_3/nostruct-align/1oacA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1oacA_3/nostruct-align/1oacA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.006653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amp
id: 1amp   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amp/nostruct-align/1amp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1908/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.071655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ash
id: 1ash   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ash/nostruct-align/1ash.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8232/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.422668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aaj
id: 1aaj   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aaj/nostruct-align/1aaj.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-3219/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.651657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bco_1
id: 1bco_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bco_1/nostruct-align/1bco_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bco_1/nostruct-align/1bco_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bco_1/nostruct-align/1bco_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16972/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.328659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ast
id: 1ast   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ast/nostruct-align/1ast.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19215/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.301651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yua_2
id: 1yua_2   alignment found: /projects/compbio4/experiments/models.97/domains/1y/1yua_2/nostruct-align/1yua_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1y/1yua_2/nostruct-align/1yua_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1y/1yua_2/nostruct-align/1yua_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.902664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1arb
id: 1arb   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1arb/nostruct-align/1arb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25982/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.544662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1admA
id: 1admA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1admA/nostruct-align/1admA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1admA/nostruct-align/1admA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1admA/nostruct-align/1admA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-25908/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.849655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gal_2
id: 1gal_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gal_2/nostruct-align/1gal_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gal_2/nostruct-align/1gal_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gal_2/nostruct-align/1gal_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11377/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.741669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1adeA
id: 1adeA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1adeA/nostruct-align/1adeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-729/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.337662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oacA_2
id: 1oacA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1oacA_2/nostruct-align/1oacA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1oacA_2/nostruct-align/1oacA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1oacA_2/nostruct-align/1oacA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24668/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.537659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1asu
id: 1asu   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1asu/nostruct-align/1asu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7184/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.541672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbo_2
id: 1bbo_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bbo_2/nostruct-align/1bbo_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bbo_2/nostruct-align/1bbo_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bbo_2/nostruct-align/1bbo_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31489/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.923660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 9api_1a1
id: 9api_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/9a/9api_1a1/nostruct-align/9api_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/9a/9api_1a1/nostruct-align/9api_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/9a/9api_1a1/nostruct-align/9api_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19423/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.421677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yua_1
id: 1yua_1   alignment found: /projects/compbio4/experiments/models.97/domains/1y/1yua_1/nostruct-align/1yua_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1y/1yua_1/nostruct-align/1yua_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1y/1yua_1/nostruct-align/1yua_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-548/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.736664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1abrA
id: 1abrA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1abrA/nostruct-align/1abrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15213/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.313660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6rlx_1a1
id: 6rlx_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/6r/6rlx_1a1/nostruct-align/6rlx_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/6r/6rlx_1a1/nostruct-align/6rlx_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/6r/6rlx_1a1/nostruct-align/6rlx_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11290/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.122665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bcfA
id: 1bcfA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bcfA/nostruct-align/1bcfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4825/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.463669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bds
id: 1bds   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bds/nostruct-align/1bds.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.883667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bfmA
id: 1bfmA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bfmA/nostruct-align/1bfmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20922/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.056656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bam
id: 1bam   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bam/nostruct-align/1bam.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10736/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.765671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bal
id: 1bal   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bal/nostruct-align/1bal.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21134/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.301651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgh
id: 1bgh   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgh/nostruct-align/1bgh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgh/nostruct-align/1bgh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgh/nostruct-align/1bgh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30048/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbhA
id: 1bbhA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbhA/nostruct-align/1bbhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8051/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.490662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhp
id: 1bhp   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhp/nostruct-align/1bhp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4771/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.628662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bet
id: 1bet   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bet/nostruct-align/1bet.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1568/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.553665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1atx
id: 1atx   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1atx/nostruct-align/1atx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8668/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.421661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bnb
id: 1bnb   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bnb/nostruct-align/1bnb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2485/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.584671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bovA
id: 1bovA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bovA/nostruct-align/1bovA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1391/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.401672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bip
id: 1bip   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bip/nostruct-align/1bip.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5326/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.696671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aak
id: 1aak   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aak/nostruct-align/1aak.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aak/nostruct-align/1aak.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aak/nostruct-align/1aak.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8716/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.379654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgc
id: 1bgc   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgc/nostruct-align/1bgc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.843658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1babA
id: 1babA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1babA/nostruct-align/1babA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15943/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.249664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brd
id: 1brd   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brd/nostruct-align/1brd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16005/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.677673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bn21
id: 1bn21   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bn21/nostruct-align/1bn21.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bn21/nostruct-align/1bn21.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bn21/nostruct-align/1bn21.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16102/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.774673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmv1
id: 1bmv1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmv1/nostruct-align/1bmv1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23883/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbpA
id: 1bbpA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbpA/nostruct-align/1bbpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14215/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.792664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1btn
id: 1btn   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1btn/nostruct-align/1btn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7971/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.949661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbt3
id: 1bbt3   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbt3/nostruct-align/1bbt3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1523/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.854660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw3
id: 1bw3   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw3/nostruct-align/1bw3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10313/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.706665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmv2
id: 1bmv2   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmv2/nostruct-align/1bmv2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29332/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.049652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brlA
id: 1brlA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brlA/nostruct-align/1brlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27872/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.457672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brsD
id: 1brsD   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brsD/nostruct-align/1brsD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16147/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.943665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bunB
id: 1bunB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bunB/nostruct-align/1bunB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9123/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.165649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c5a
id: 1c5a   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c5a/nostruct-align/1c5a.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-2823/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.545670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cc5
id: 1cc5   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cc5/nostruct-align/1cc5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5459/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.517654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cbp
id: 1cbp   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cbp/nostruct-align/1cbp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cbp/nostruct-align/1cbp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cbp/nostruct-align/1cbp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18202/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.466660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bpi
id: 1bpi   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bpi/nostruct-align/1bpi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10080/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.153656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cbh
id: 1cbh   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cbh/nostruct-align/1cbh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18023/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.761658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdcB
id: 1cdcB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdcB/nostruct-align/1cdcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22765/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.034668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gal_1
id: 1gal_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gal_1/nostruct-align/1gal_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gal_1/nostruct-align/1gal_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gal_1/nostruct-align/1gal_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18984/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.099655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1art
id: 1art   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1art/nostruct-align/1art.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4132/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.126663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1atlA
id: 1atlA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1atlA/nostruct-align/1atlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30665/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.732651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5rubA_2
id: 5rubA_2   alignment found: /projects/compbio4/experiments/models.97/domains/5r/5rubA_2/nostruct-align/5rubA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/5r/5rubA_2/nostruct-align/5rubA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/5r/5rubA_2/nostruct-align/5rubA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-433/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.811661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cgo
id: 1cgo   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cgo/nostruct-align/1cgo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31018/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.422653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chl
id: 1chl   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1chl/nostruct-align/1chl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16478/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.795670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chd
id: 1chd   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1chd/nostruct-align/1chd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.397675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brnL
id: 1brnL   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brnL/nostruct-align/1brnL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-487/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.997665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chc
id: 1chc   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1chc/nostruct-align/1chc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19220/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.048676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cmbA
id: 1cmbA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cmbA/nostruct-align/1cmbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28897/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.001663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cnr
id: 1cnr   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cnr/nostruct-align/1cnr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31724/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.627655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1btl
id: 1btl   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1btl/nostruct-align/1btl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12816/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.804657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1coaI
id: 1coaI   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1coaI/nostruct-align/1coaI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20216/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.873657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brlB
id: 1brlB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brlB/nostruct-align/1brlB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4215/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.586655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdq
id: 1cdq   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdq/nostruct-align/1cdq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9093/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.267654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1coo
id: 1coo   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1coo/nostruct-align/1coo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12238/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.819656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1copD
id: 1copD   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1copD/nostruct-align/1copD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22343/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.993668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cpcA
id: 1cpcA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cpcA/nostruct-align/1cpcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8245/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.021652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ata
id: 1ata   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ata/nostruct-align/1ata.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18154/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.092667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1celA
id: 1celA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1celA/nostruct-align/1celA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2441/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.197662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ckaA
id: 1ckaA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ckaA/nostruct-align/1ckaA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26720/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -40.134659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oacA_1
id: 1oacA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1oacA_1/nostruct-align/1oacA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1oacA_1/nostruct-align/1oacA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1oacA_1/nostruct-align/1oacA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11734/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.247665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1byb
id: 1byb   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1byb/nostruct-align/1byb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22858/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.346664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbo_1
id: 1bbo_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bbo_1/nostruct-align/1bbo_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bbo_1/nostruct-align/1bbo_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bbo_1/nostruct-align/1bbo_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15944/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.650665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cae
id: 1cae   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cae/nostruct-align/1cae.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cae/nostruct-align/1cae.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cae/nostruct-align/1cae.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-23584/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.705673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ytbA_2
id: 1ytbA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1y/1ytbA_2/nostruct-align/1ytbA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1y/1ytbA_2/nostruct-align/1ytbA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1y/1ytbA_2/nostruct-align/1ytbA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29111/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.195648
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fnb_2
id: 1fnb_2   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fnb_2/nostruct-align/1fnb_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fnb_2/nostruct-align/1fnb_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fnb_2/nostruct-align/1fnb_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31999/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.703674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nif_2
id: 1nif_2   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1nif_2/nostruct-align/1nif_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1nif_2/nostruct-align/1nif_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1nif_2/nostruct-align/1nif_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30110/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.230652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cseI
id: 1cseI   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cseI/nostruct-align/1cseI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7982/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.611649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1csmA
id: 1csmA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1csmA/nostruct-align/1csmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.723663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cskA
id: 1cskA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cskA/nostruct-align/1cskA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-24476/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.031670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cwpA
id: 1cwpA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cwpA/nostruct-align/1cwpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28663/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.309662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aco_2
id: 1aco_2   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1aco_2/nostruct-align/1aco_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1aco_2/nostruct-align/1aco_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1aco_2/nostruct-align/1aco_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19094/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.713654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cus
id: 1cus   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cus/nostruct-align/1cus.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7235/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.262650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctf
id: 1ctf   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ctf/nostruct-align/1ctf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14236/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.655655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cyi
id: 1cyi   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cyi/nostruct-align/1cyi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6451/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.784668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amg_1
id: 1amg_1   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1amg_1/nostruct-align/1amg_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1amg_1/nostruct-align/1amg_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1amg_1/nostruct-align/1amg_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13304/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.876663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dchA
id: 1dchA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dchA/nostruct-align/1dchA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21341/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.573654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1daaA
id: 1daaA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1daaA/nostruct-align/1daaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6315/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.905655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1deaA
id: 1deaA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1deaA/nostruct-align/1deaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5850/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.395660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aru
id: 1aru   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aru/nostruct-align/1aru.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32250/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.542664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1colA
id: 1colA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1colA/nostruct-align/1colA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20869/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.884659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dec
id: 1dec   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dec/nostruct-align/1dec.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14285/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.845657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cpn
id: 1cpn   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cpn/nostruct-align/1cpn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24682/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.319656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1asyA_2
id: 1asyA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1asyA_2/nostruct-align/1asyA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1asyA_2/nostruct-align/1asyA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1asyA_2/nostruct-align/1asyA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30619/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.958664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ytbA_1
id: 1ytbA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1y/1ytbA_1/nostruct-align/1ytbA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1y/1ytbA_1/nostruct-align/1ytbA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1y/1ytbA_1/nostruct-align/1ytbA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2988/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.415665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbt1
id: 1bbt1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbt1/nostruct-align/1bbt1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13468/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.006668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dmaA
id: 1dmaA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dmaA/nostruct-align/1dmaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13945/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.483658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dme
id: 1dme   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dme/nostruct-align/1dme.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17079/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.301666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cyx
id: 1cyx   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cyx/nostruct-align/1cyx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21772/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.080658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dctA
id: 1dctA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dctA/nostruct-align/1dctA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31146/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.663666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fnb_1
id: 1fnb_1   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fnb_1/nostruct-align/1fnb_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fnb_1/nostruct-align/1fnb_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fnb_1/nostruct-align/1fnb_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11219/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.446671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dfnA
id: 1dfnA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dfnA/nostruct-align/1dfnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28265/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.456665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dupA
id: 1dupA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dupA/nostruct-align/1dupA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31315/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.901657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dvh
id: 1dvh   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dvh/nostruct-align/1dvh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.974670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cbg
id: 1cbg   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cbg/nostruct-align/1cbg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5977/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.721664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dmc
id: 1dmc   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dmc/nostruct-align/1dmc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32496/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.416672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dtx
id: 1dtx   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dtx/nostruct-align/1dtx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21184/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.157669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dhr
id: 1dhr   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dhr/nostruct-align/1dhr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3644/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.706665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cec
id: 1cec   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cec/nostruct-align/1cec.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31869/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.430664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nif_1
id: 1nif_1   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1nif_1/nostruct-align/1nif_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1nif_1/nostruct-align/1nif_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1nif_1/nostruct-align/1nif_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4725/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.505661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dynA
id: 1dynA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dynA/nostruct-align/1dynA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8602/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.003662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dts
id: 1dts   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dts/nostruct-align/1dts.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21739/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.805664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1asyA_1
id: 1asyA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1asyA_1/nostruct-align/1asyA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1asyA_1/nostruct-align/1asyA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1asyA_1/nostruct-align/1asyA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4662/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.069656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cpcB
id: 1cpcB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cpcB/nostruct-align/1cpcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28938/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.210663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5rubA_1
id: 5rubA_1   alignment found: /projects/compbio4/experiments/models.97/domains/5r/5rubA_1/nostruct-align/5rubA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/5r/5rubA_1/nostruct-align/5rubA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/5r/5rubA_1/nostruct-align/5rubA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4716/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.815659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ego
id: 1ego   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ego/nostruct-align/1ego.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4294/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.582657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecmA
id: 1ecmA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecmA/nostruct-align/1ecmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24209/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.226654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cseE
id: 1cseE   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cseE/nostruct-align/1cseE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9337/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.944656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4gcr_2
id: 4gcr_2   alignment found: /projects/compbio4/experiments/models.97/domains/4g/4gcr_2/nostruct-align/4gcr_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/4g/4gcr_2/nostruct-align/4gcr_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/4g/4gcr_2/nostruct-align/4gcr_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8188/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.444672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1csh
id: 1csh   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1csh/nostruct-align/1csh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24820/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.126663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xrb_3
id: 1xrb_3   alignment found: /projects/compbio4/experiments/models.97/domains/1x/1xrb_3/nostruct-align/1xrb_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1x/1xrb_3/nostruct-align/1xrb_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1x/1xrb_3/nostruct-align/1xrb_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18098/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.348663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fcdC_2
id: 1fcdC_2   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fcdC_2/nostruct-align/1fcdC_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fcdC_2/nostruct-align/1fcdC_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fcdC_2/nostruct-align/1fcdC_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4503/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.213669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4gcr_1
id: 4gcr_1   alignment found: /projects/compbio4/experiments/models.97/domains/4g/4gcr_1/nostruct-align/4gcr_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/4g/4gcr_1/nostruct-align/4gcr_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/4g/4gcr_1/nostruct-align/4gcr_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6141/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.303665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eng
id: 1eng   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eng/nostruct-align/1eng.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eng/nostruct-align/1eng.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eng/nostruct-align/1eng.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.242661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eca
id: 1eca   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eca/nostruct-align/1eca.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23933/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.346664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1egf
id: 1egf   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1egf/nostruct-align/1egf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6420/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.899658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nhp_3
id: 1nhp_3   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1nhp_3/nostruct-align/1nhp_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1nhp_3/nostruct-align/1nhp_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1nhp_3/nostruct-align/1nhp_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20517/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.902664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eit
id: 1eit   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eit/nostruct-align/1eit.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1651/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.422668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecl
id: 1ecl   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecl/nostruct-align/1ecl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15537/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1epbA
id: 1epbA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1epbA/nostruct-align/1epbA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-25976/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.535660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1edt
id: 1edt   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1edt/nostruct-align/1edt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12210/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.539658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dhx
id: 1dhx   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dhx/nostruct-align/1dhx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2758/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.269653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ede
id: 1ede   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ede/nostruct-align/1ede.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28414/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.823654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1erl
id: 1erl   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1erl/nostruct-align/1erl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1erl/nostruct-align/1erl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1erl/nostruct-align/1erl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9847/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.928665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1erd
id: 1erd   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1erd/nostruct-align/1erd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19566/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.802658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eriA
id: 1eriA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eriA/nostruct-align/1eriA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7349/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.048676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ehs
id: 1ehs   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ehs/nostruct-align/1ehs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4129/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.637665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aozA_3
id: 1aozA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1aozA_3/nostruct-align/1aozA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1aozA_3/nostruct-align/1aozA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1aozA_3/nostruct-align/1aozA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-779/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.304672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1draA
id: 1draA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1draA/nostruct-align/1draA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20136/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.057663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1erp
id: 1erp   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1erp/nostruct-align/1erp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23631/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.943665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xrb_2
id: 1xrb_2   alignment found: /projects/compbio4/experiments/models.97/domains/1x/1xrb_2/nostruct-align/1xrb_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1x/1xrb_2/nostruct-align/1xrb_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1x/1xrb_2/nostruct-align/1xrb_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30282/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.299667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fcdC_1
id: 1fcdC_1   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fcdC_1/nostruct-align/1fcdC_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fcdC_1/nostruct-align/1fcdC_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fcdC_1/nostruct-align/1fcdC_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26242/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.761673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amg_2
id: 1amg_2   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1amg_2/nostruct-align/1amg_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1amg_2/nostruct-align/1amg_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1amg_2/nostruct-align/1amg_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22758/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.659653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nhp_2
id: 1nhp_2   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1nhp_2/nostruct-align/1nhp_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1nhp_2/nostruct-align/1nhp_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1nhp_2/nostruct-align/1nhp_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2293/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.313660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amy_1
id: 1amy_1   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1amy_1/nostruct-align/1amy_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1amy_1/nostruct-align/1amy_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1amy_1/nostruct-align/1amy_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24652/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fc2C
id: 1fc2C   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fc2C/nostruct-align/1fc2C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16586/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.164658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eta1
id: 1eta1   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eta1/nostruct-align/1eta1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20766/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.722656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3rubL_2
id: 3rubL_2   alignment found: /projects/compbio4/experiments/models.97/domains/3r/3rubL_2/nostruct-align/3rubL_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3r/3rubL_2/nostruct-align/3rubL_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3r/3rubL_2/nostruct-align/3rubL_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24243/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.996658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fca
id: 1fca   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fca/nostruct-align/1fca.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6742/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.961670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1exg
id: 1exg   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1exg/nostruct-align/1exg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28695/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.815659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fd2
id: 1fd2   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fd2/nostruct-align/1fd2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3131/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.343674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fipA
id: 1fipA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fipA/nostruct-align/1fipA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24095/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.226669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aozA_2
id: 1aozA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1aozA_2/nostruct-align/1aozA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1aozA_2/nostruct-align/1aozA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1aozA_2/nostruct-align/1aozA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9900/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.237671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xrb_1
id: 1xrb_1   alignment found: /projects/compbio4/experiments/models.97/domains/1x/1xrb_1/nostruct-align/1xrb_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1x/1xrb_1/nostruct-align/1xrb_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1x/1xrb_1/nostruct-align/1xrb_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19832/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.666656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fcdA_3
id: 1fcdA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fcdA_3/nostruct-align/1fcdA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fcdA_3/nostruct-align/1fcdA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fcdA_3/nostruct-align/1fcdA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16814/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.194672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fkd
id: 1fkd   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fkd/nostruct-align/1fkd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23169/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.191666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fliA
id: 1fliA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fliA/nostruct-align/1fliA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11092/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.166672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1flp
id: 1flp   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1flp/nostruct-align/1flp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13562/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.439667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bnh
id: 1bnh   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bnh/nostruct-align/1bnh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bnh/nostruct-align/1bnh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bnh/nostruct-align/1bnh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25448/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.769653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fna
id: 1fna   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fna/nostruct-align/1fna.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.213669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fosE
id: 1fosE   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fosE/nostruct-align/1fosE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13579/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.820663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1enh
id: 1enh   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1enh/nostruct-align/1enh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18241/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.414658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gatA
id: 1gatA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gatA/nostruct-align/1gatA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-279/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.517654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fxrA
id: 1fxrA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fxrA/nostruct-align/1fxrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27933/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.502655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1frd
id: 1frd   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1frd/nostruct-align/1frd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31807/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.438660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nhp_1
id: 1nhp_1   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1nhp_1/nostruct-align/1nhp_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1nhp_1/nostruct-align/1nhp_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1nhp_1/nostruct-align/1nhp_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20855/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.180664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fivA
id: 1fivA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fivA/nostruct-align/1fivA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24575/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.329666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dppA
id: 1dppA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dppA/nostruct-align/1dppA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18299/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.028656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gbs
id: 1gbs   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gbs/nostruct-align/1gbs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5417/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.531662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1garA
id: 1garA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1garA/nostruct-align/1garA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19801/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.234665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aozA_1
id: 1aozA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1aozA_1/nostruct-align/1aozA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1aozA_1/nostruct-align/1aozA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1aozA_1/nostruct-align/1aozA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.636673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fosF
id: 1fosF   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fosF/nostruct-align/1fosF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29502/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.806656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1csn
id: 1csn   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1csn/nostruct-align/1csn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21490/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.418671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1esc
id: 1esc   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1esc/nostruct-align/1esc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.909653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gmpA
id: 1gmpA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gmpA/nostruct-align/1gmpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10632/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gca
id: 1gca   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gca/nostruct-align/1gca.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23956/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.790665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gp1A
id: 1gp1A   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gp1A/nostruct-align/1gp1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6718/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.294662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ftt
id: 1ftt   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1ftt/nostruct-align/1ftt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.556656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1glaF
id: 1glaF   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1glaF/nostruct-align/1glaF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12133/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.170670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gmfA
id: 1gmfA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gmfA/nostruct-align/1gmfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gmfA/nostruct-align/1gmfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gmfA/nostruct-align/1gmfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-24047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.018661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gtqA
id: 1gtqA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gtqA/nostruct-align/1gtqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18328/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.243668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpc
id: 1gpc   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gpc/nostruct-align/1gpc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12060/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.143661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gps
id: 1gps   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gps/nostruct-align/1gps.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6088/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.860657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fps
id: 1fps   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fps/nostruct-align/1fps.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11868/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.073669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpr
id: 1gpr   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gpr/nostruct-align/1gpr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12938/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.146652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcnA
id: 1hcnA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcnA/nostruct-align/1hcnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9647/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.901657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcd
id: 1hcd   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcd/nostruct-align/1hcd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-590/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.614670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eps
id: 1eps   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eps/nostruct-align/1eps.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30107/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.069656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcnB
id: 1hcnB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcnB/nostruct-align/1hcnB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8311/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.685654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcgB
id: 1hcgB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcgB/nostruct-align/1hcgB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13189/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.852661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcrA
id: 1hcrA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcrA/nostruct-align/1hcrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.672653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gky
id: 1gky   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gky/nostruct-align/1gky.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26439/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.363663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amy_2
id: 1amy_2   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1amy_2/nostruct-align/1amy_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1amy_2/nostruct-align/1amy_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1amy_2/nostruct-align/1amy_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12341/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.441666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcc
id: 1hcc   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcc/nostruct-align/1hcc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26057/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.502670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1glm
id: 1glm   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1glm/nostruct-align/1glm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9925/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.330658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hbp
id: 1hbp   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hbp/nostruct-align/1hbp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18611/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.263672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eaf
id: 1eaf   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eaf/nostruct-align/1eaf.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28150/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.439667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hbg
id: 1hbg   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hbg/nostruct-align/1hbg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26954/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.480667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hfc
id: 1hfc   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hfc/nostruct-align/1hfc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20040/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.687668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eny
id: 1eny   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eny/nostruct-align/1eny.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9615/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.159668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gcb
id: 1gcb   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gcb/nostruct-align/1gcb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12613/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.599670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3rubL_1
id: 3rubL_1   alignment found: /projects/compbio4/experiments/models.97/domains/3r/3rubL_1/nostruct-align/3rubL_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3r/3rubL_1/nostruct-align/3rubL_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3r/3rubL_1/nostruct-align/3rubL_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26336/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.434662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wht_1a1
id: 1wht_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1w/1wht_1a1/nostruct-align/1wht_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1w/1wht_1a1/nostruct-align/1wht_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1w/1wht_1a1/nostruct-align/1wht_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30521/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.297668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pmgA_4
id: 3pmgA_4   alignment found: /projects/compbio4/experiments/models.97/domains/3p/3pmgA_4/nostruct-align/3pmgA_4.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3p/3pmgA_4/nostruct-align/3pmgA_4.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3p/3pmgA_4/nostruct-align/3pmgA_4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7628/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.485672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fcdA_2
id: 1fcdA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fcdA_2/nostruct-align/1fcdA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fcdA_2/nostruct-align/1fcdA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fcdA_2/nostruct-align/1fcdA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10296/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.574661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pmgA_3
id: 3pmgA_3   alignment found: /projects/compbio4/experiments/models.97/domains/3p/3pmgA_3/nostruct-align/3pmgA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3p/3pmgA_3/nostruct-align/3pmgA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3p/3pmgA_3/nostruct-align/3pmgA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17890/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.628662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aorA_1
id: 1aorA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1aorA_1/nostruct-align/1aorA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1aorA_1/nostruct-align/1aorA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1aorA_1/nostruct-align/1aorA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20749/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.812668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ncfA_3
id: 1ncfA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1ncfA_3/nostruct-align/1ncfA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1ncfA_3/nostruct-align/1ncfA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1ncfA_3/nostruct-align/1ncfA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22187/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.627655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hmcA
id: 1hmcA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hmcA/nostruct-align/1hmcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5553/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.992661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pmgA_2
id: 3pmgA_2   alignment found: /projects/compbio4/experiments/models.97/domains/3p/3pmgA_2/nostruct-align/3pmgA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3p/3pmgA_2/nostruct-align/3pmgA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3p/3pmgA_2/nostruct-align/3pmgA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.454666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hmpA
id: 1hmpA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hmpA/nostruct-align/1hmpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-24360/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.560669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fbaA
id: 1fbaA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fbaA/nostruct-align/1fbaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18643/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.832672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hnr
id: 1hnr   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnr/nostruct-align/1hnr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11144/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.265656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hfi
id: 1hfi   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hfi/nostruct-align/1hfi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20636/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.540665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcqA
id: 1hcqA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcqA/nostruct-align/1hcqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8167/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.076660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pmgA_1
id: 3pmgA_1   alignment found: /projects/compbio4/experiments/models.97/domains/3p/3pmgA_1/nostruct-align/3pmgA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3p/3pmgA_1/nostruct-align/3pmgA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3p/3pmgA_1/nostruct-align/3pmgA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6975/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.266663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hms
id: 1hms   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hms/nostruct-align/1hms.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-27231/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.735672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ghr
id: 1ghr   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1ghr/nostruct-align/1ghr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-240/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.568665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hjrA
id: 1hjrA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hjrA/nostruct-align/1hjrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4320/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.154663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hdcA
id: 1hdcA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hdcA/nostruct-align/1hdcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31069/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.673660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ins_1a1
id: 3ins_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/3i/3ins_1a1/nostruct-align/3ins_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3i/3ins_1a1/nostruct-align/3ins_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3i/3ins_1a1/nostruct-align/3ins_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4305/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.943665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bco_2
id: 1bco_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bco_2/nostruct-align/1bco_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bco_2/nostruct-align/1bco_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bco_2/nostruct-align/1bco_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23235/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.468674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hma
id: 1hma   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hma/nostruct-align/1hma.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13804/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.063660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdmA_1
id: 1bdmA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bdmA_1/nostruct-align/1bdmA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bdmA_1/nostruct-align/1bdmA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bdmA_1/nostruct-align/1bdmA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23881/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.403656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3hhrB_2
id: 3hhrB_2   alignment found: /projects/compbio4/experiments/models.97/domains/3h/3hhrB_2/nostruct-align/3hhrB_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3h/3hhrB_2/nostruct-align/3hhrB_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3h/3hhrB_2/nostruct-align/3hhrB_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21085/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.510666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wgtA_4
id: 1wgtA_4   alignment found: /projects/compbio4/experiments/models.97/domains/1w/1wgtA_4/nostruct-align/1wgtA_4.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1w/1wgtA_4/nostruct-align/1wgtA_4.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1w/1wgtA_4/nostruct-align/1wgtA_4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30998/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.663666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3hhrB_1
id: 3hhrB_1   alignment found: /projects/compbio4/experiments/models.97/domains/3h/3hhrB_1/nostruct-align/3hhrB_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3h/3hhrB_1/nostruct-align/3hhrB_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3h/3hhrB_1/nostruct-align/3hhrB_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2595/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.442673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hmy
id: 1hmy   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hmy/nostruct-align/1hmy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21224/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.721664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdmA_2
id: 1bdmA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bdmA_2/nostruct-align/1bdmA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bdmA_2/nostruct-align/1bdmA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bdmA_2/nostruct-align/1bdmA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3581/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.352661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3dpa_2
id: 3dpa_2   alignment found: /projects/compbio4/experiments/models.97/domains/3d/3dpa_2/nostruct-align/3dpa_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3d/3dpa_2/nostruct-align/3dpa_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3d/3dpa_2/nostruct-align/3dpa_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6883/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.746658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bglA_1
id: 1bglA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bglA_1/nostruct-align/1bglA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bglA_1/nostruct-align/1bglA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bglA_1/nostruct-align/1bglA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26958/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.418671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3dpa_1
id: 3dpa_1   alignment found: /projects/compbio4/experiments/models.97/domains/3d/3dpa_1/nostruct-align/3dpa_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3d/3dpa_1/nostruct-align/3dpa_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3d/3dpa_1/nostruct-align/3dpa_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25792/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.677673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bglA_2
id: 1bglA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bglA_2/nostruct-align/1bglA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bglA_2/nostruct-align/1bglA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bglA_2/nostruct-align/1bglA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15593/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.015656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cd4_2
id: 3cd4_2   alignment found: /projects/compbio4/experiments/models.97/domains/3c/3cd4_2/nostruct-align/3cd4_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3c/3cd4_2/nostruct-align/3cd4_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3c/3cd4_2/nostruct-align/3cd4_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24167/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.153671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hrq
id: 1hrq   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hrq/nostruct-align/1hrq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.292664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hoe
id: 1hoe   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hoe/nostruct-align/1hoe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25128/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.564651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1htp
id: 1htp   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1htp/nostruct-align/1htp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30090/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.051666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hulA
id: 1hulA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hulA/nostruct-align/1hulA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-282/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.448669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fcdA_1
id: 1fcdA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fcdA_1/nostruct-align/1fcdA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fcdA_1/nostruct-align/1fcdA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fcdA_1/nostruct-align/1fcdA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30732/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.510666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hryA
id: 1hryA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hryA/nostruct-align/1hryA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29580/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.168655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hsq
id: 1hsq   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hsq/nostruct-align/1hsq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.953667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hpi
id: 1hpi   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hpi/nostruct-align/1hpi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15477/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.832657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hueA
id: 1hueA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hueA/nostruct-align/1hueA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20035/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.900665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1epnE
id: 1epnE   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1epnE/nostruct-align/1epnE.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-6542/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.770660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ncfA_2
id: 1ncfA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1ncfA_2/nostruct-align/1ncfA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1ncfA_2/nostruct-align/1ncfA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1ncfA_2/nostruct-align/1ncfA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9996/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.955673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hstA
id: 1hstA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hstA/nostruct-align/1hstA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32411/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.582657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bglA_3
id: 1bglA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bglA_3/nostruct-align/1bglA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bglA_3/nostruct-align/1bglA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bglA_3/nostruct-align/1bglA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27271/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.384674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cd4_1
id: 3cd4_1   alignment found: /projects/compbio4/experiments/models.97/domains/3c/3cd4_1/nostruct-align/3cd4_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/3c/3cd4_1/nostruct-align/3cd4_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/3c/3cd4_1/nostruct-align/3cd4_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7271/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.552673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mnr_2
id: 2mnr_2   alignment found: /projects/compbio4/experiments/models.97/domains/2m/2mnr_2/nostruct-align/2mnr_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2m/2mnr_2/nostruct-align/2mnr_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2m/2mnr_2/nostruct-align/2mnr_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3867/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2yhx_2
id: 2yhx_2   alignment found: /projects/compbio4/experiments/models.97/domains/2y/2yhx_2/nostruct-align/2yhx_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2y/2yhx_2/nostruct-align/2yhx_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2y/2yhx_2/nostruct-align/2yhx_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24027/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.110657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1humA
id: 1humA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1humA/nostruct-align/1humA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14391/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.443665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hvd
id: 1hvd   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hvd/nostruct-align/1hvd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-27124/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.676666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hvm
id: 1hvm   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hvm/nostruct-align/1hvm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hvm/nostruct-align/1hvm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hvm/nostruct-align/1hvm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3176/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.351669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2yhx_1
id: 2yhx_1   alignment found: /projects/compbio4/experiments/models.97/domains/2y/2yhx_1/nostruct-align/2yhx_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2y/2yhx_1/nostruct-align/2yhx_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2y/2yhx_1/nostruct-align/2yhx_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11151/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.438660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ts1_2
id: 2ts1_2   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2ts1_2/nostruct-align/2ts1_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2ts1_2/nostruct-align/2ts1_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2ts1_2/nostruct-align/2ts1_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31099/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.352661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1htmB
id: 1htmB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1htmB/nostruct-align/1htmB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23752/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.120667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cpt
id: 1cpt   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cpt/nostruct-align/1cpt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20895/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.445663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ts1_1
id: 2ts1_1   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2ts1_1/nostruct-align/2ts1_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2ts1_1/nostruct-align/2ts1_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2ts1_1/nostruct-align/2ts1_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27852/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.375671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hyp
id: 1hyp   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hyp/nostruct-align/1hyp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21020/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.483658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1i1b
id: 1i1b   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1i1b/nostruct-align/1i1b.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-21163/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.992676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tprA_3
id: 2tprA_3   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2tprA_3/nostruct-align/2tprA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2tprA_3/nostruct-align/2tprA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2tprA_3/nostruct-align/2tprA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14521/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.965652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1grl_2
id: 1grl_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1grl_2/nostruct-align/1grl_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1grl_2/nostruct-align/1grl_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1grl_2/nostruct-align/1grl_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11573/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.772675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ifj
id: 1ifj   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ifj/nostruct-align/1ifj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21992/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.696671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tprA_2
id: 2tprA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2tprA_2/nostruct-align/2tprA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2tprA_2/nostruct-align/2tprA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2tprA_2/nostruct-align/2tprA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23950/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.325668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ifl
id: 1ifl   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ifl/nostruct-align/1ifl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27727/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.627655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hxn
id: 1hxn   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hxn/nostruct-align/1hxn.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23394/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.439651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ica
id: 1ica   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ica/nostruct-align/1ica.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30338/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.742661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ifm
id: 1ifm   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ifm/nostruct-align/1ifm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26854/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.718658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1igd
id: 1igd   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1igd/nostruct-align/1igd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6389/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.093658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1igl
id: 1igl   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1igl/nostruct-align/1igl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28748/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.135651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hurA
id: 1hurA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hurA/nostruct-align/1hurA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20682/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.914658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bglA_4
id: 1bglA_4   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bglA_4/nostruct-align/1bglA_4.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bglA_4/nostruct-align/1bglA_4.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bglA_4/nostruct-align/1bglA_4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24862/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.803665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1huw
id: 1huw   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1huw/nostruct-align/1huw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28339/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.597672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ilk
id: 1ilk   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ilk/nostruct-align/1ilk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10838/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.123672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ifc
id: 1ifc   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ifc/nostruct-align/1ifc.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10482/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.917648
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ilr1
id: 1ilr1   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ilr1/nostruct-align/1ilr1.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-27321/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.813660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1isuA
id: 1isuA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1isuA/nostruct-align/1isuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.764664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poxA_3
id: 1poxA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1poxA_3/nostruct-align/1poxA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1poxA_3/nostruct-align/1poxA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1poxA_3/nostruct-align/1poxA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13996/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.810669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1inp
id: 1inp   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1inp/nostruct-align/1inp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23928/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.883652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tprA_1
id: 2tprA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2tprA_1/nostruct-align/2tprA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2tprA_1/nostruct-align/2tprA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2tprA_1/nostruct-align/2tprA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20910/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kanA
id: 1kanA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kanA/nostruct-align/1kanA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27265/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.379669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iva
id: 1iva   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/models.97/pdb/1i/1iva/nostruct-align/1iva.t99.a2m.gz
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.066666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfb_2
id: 1cfb_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cfb_2/nostruct-align/1cfb_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cfb_2/nostruct-align/1cfb_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cfb_2/nostruct-align/1cfb_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13622/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.410660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bglA_5
id: 1bglA_5   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bglA_5/nostruct-align/1bglA_5.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bglA_5/nostruct-align/1bglA_5.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bglA_5/nostruct-align/1bglA_5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5868/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kal
id: 1kal   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kal/nostruct-align/1kal.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.269669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bi6H_1
id: 1bi6H_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bi6H_1/nostruct-align/1bi6H_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bi6H_1/nostruct-align/1bi6H_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bi6H_1/nostruct-align/1bi6H_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22039/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.313660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bia_1
id: 1bia_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bia_1/nostruct-align/1bia_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bia_1/nostruct-align/1bia_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bia_1/nostruct-align/1bia_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1148/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.267670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bia_2
id: 1bia_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bia_2/nostruct-align/1bia_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bia_2/nostruct-align/1bia_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bia_2/nostruct-align/1bia_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2863/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.996658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mnr_1
id: 2mnr_1   alignment found: /projects/compbio4/experiments/models.97/domains/2m/2mnr_1/nostruct-align/2mnr_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2m/2mnr_1/nostruct-align/2mnr_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2m/2mnr_1/nostruct-align/2mnr_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25300/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.505661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1knb
id: 1knb   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1knb/nostruct-align/1knb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17916/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.766663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ithA
id: 1ithA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ithA/nostruct-align/1ithA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23119/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.508667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tmdA_3
id: 2tmdA_3   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2tmdA_3/nostruct-align/2tmdA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2tmdA_3/nostruct-align/2tmdA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2tmdA_3/nostruct-align/2tmdA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7317/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -13.170654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tmdA_2
id: 2tmdA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2tmdA_2/nostruct-align/2tmdA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2tmdA_2/nostruct-align/2tmdA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2tmdA_2/nostruct-align/2tmdA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15196/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.475662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hlb
id: 1hlb   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hlb/nostruct-align/1hlb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29046/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.581665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bia_3
id: 1bia_3   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bia_3/nostruct-align/1bia_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bia_3/nostruct-align/1bia_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bia_3/nostruct-align/1bia_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19958/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.072662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1itg
id: 1itg   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1itg/nostruct-align/1itg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21631/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.831650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmtA_1
id: 1bmtA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bmtA_1/nostruct-align/1bmtA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bmtA_1/nostruct-align/1bmtA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bmtA_1/nostruct-align/1bmtA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18879/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.227661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tmdA_1
id: 2tmdA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2t/2tmdA_1/nostruct-align/2tmdA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2t/2tmdA_1/nostruct-align/2tmdA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2t/2tmdA_1/nostruct-align/2tmdA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29444/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.113663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hre
id: 1hre   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hre/nostruct-align/1hre.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19034/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.104675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmtA_2
id: 1bmtA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bmtA_2/nostruct-align/1bmtA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bmtA_2/nostruct-align/1bmtA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bmtA_2/nostruct-align/1bmtA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19545/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.784668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sblB_2
id: 2sblB_2   alignment found: /projects/compbio4/experiments/models.97/domains/2s/2sblB_2/nostruct-align/2sblB_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2s/2sblB_2/nostruct-align/2sblB_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2s/2sblB_2/nostruct-align/2sblB_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.231659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1idm
id: 1idm   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1idm/nostruct-align/1idm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5960/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.449661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bncA_1
id: 1bncA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bncA_1/nostruct-align/1bncA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bncA_1/nostruct-align/1bncA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bncA_1/nostruct-align/1bncA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29553/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.756668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lba
id: 1lba   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lba/nostruct-align/1lba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28586/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.043671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1grl_1
id: 1grl_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1grl_1/nostruct-align/1grl_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1grl_1/nostruct-align/1grl_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1grl_1/nostruct-align/1grl_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26923/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.455658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lab
id: 1lab   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lab/nostruct-align/1lab.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29230/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.309662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1knt
id: 1knt   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1knt/nostruct-align/1knt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-26537/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.194672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lea
id: 1lea   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lea/nostruct-align/1lea.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14688/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.902649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lfb
id: 1lfb   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lfb/nostruct-align/1lfb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10932/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.995651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kptA
id: 1kptA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kptA/nostruct-align/1kptA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1999/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.781662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bncA_2
id: 1bncA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bncA_2/nostruct-align/1bncA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bncA_2/nostruct-align/1bncA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bncA_2/nostruct-align/1bncA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27483/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.862656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1idaA
id: 1idaA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1idaA/nostruct-align/1idaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28757/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.259674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lccA
id: 1lccA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lccA/nostruct-align/1lccA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4238/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.004669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1har
id: 1har   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1har/nostruct-align/1har.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20542/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.649658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hgeA
id: 1hgeA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hgeA/nostruct-align/1hgeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8035/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.984665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ldl
id: 1ldl   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ldl/nostruct-align/1ldl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4291/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ltsD
id: 1ltsD   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ltsD/nostruct-align/1ltsD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17741/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.981674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poxA_2
id: 1poxA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1poxA_2/nostruct-align/1poxA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1poxA_2/nostruct-align/1poxA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1poxA_2/nostruct-align/1poxA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20944/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.943665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lis
id: 1lis   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lis/nostruct-align/1lis.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12896/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.718658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lki
id: 1lki   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lki/nostruct-align/1lki.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19695/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.855652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lliA
id: 1lliA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lliA/nostruct-align/1lliA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18293/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.853668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lpt
id: 1lpt   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lpt/nostruct-align/1lpt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lpt/nostruct-align/1lpt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lpt/nostruct-align/1lpt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9479/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.519669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lh1
id: 1lh1   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lh1/nostruct-align/1lh1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24389/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.469666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lfaA
id: 1lfaA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lfaA/nostruct-align/1lfaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11712/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.597656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lst
id: 1lst   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lst/nostruct-align/1lst.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4970/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.490677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfb_1
id: 1cfb_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cfb_1/nostruct-align/1cfb_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cfb_1/nostruct-align/1cfb_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cfb_1/nostruct-align/1cfb_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16029/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.193665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mctI
id: 1mctI   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mctI/nostruct-align/1mctI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11258/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.233658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lgr
id: 1lgr   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lgr/nostruct-align/1lgr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26537/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.797653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lpe
id: 1lpe   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lpe/nostruct-align/1lpe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23383/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.459656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mat
id: 1mat   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mat/nostruct-align/1mat.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29828/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.392670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bncA_3
id: 1bncA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bncA_3/nostruct-align/1bncA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bncA_3/nostruct-align/1bncA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bncA_3/nostruct-align/1bncA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9898/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.743652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hylA
id: 1hylA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hylA/nostruct-align/1hylA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-10790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.095657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mba
id: 1mba   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mba/nostruct-align/1mba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3822/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.439667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mli
id: 1mli   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mli/nostruct-align/1mli.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24734/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.083664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mdiA
id: 1mdiA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mdiA/nostruct-align/1mdiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12352/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.053665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mjc
id: 1mjc   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mjc/nostruct-align/1mjc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23205/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.830673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ldr
id: 1ldr   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ldr/nostruct-align/1ldr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12198/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.495651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2kauC_2
id: 2kauC_2   alignment found: /projects/compbio4/experiments/models.97/domains/2k/2kauC_2/nostruct-align/2kauC_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2k/2kauC_2/nostruct-align/2kauC_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2k/2kauC_2/nostruct-align/2kauC_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18163/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.840668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bom_1a1
id: 1bom_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bom_1a1/nostruct-align/1bom_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bom_1a1/nostruct-align/1bom_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bom_1a1/nostruct-align/1bom_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.551666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mea
id: 1mea   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mea/nostruct-align/1mea.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5545/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.552658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mdyA
id: 1mdyA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mdyA/nostruct-align/1mdyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4887/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.855652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1grj_2
id: 1grj_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1grj_2/nostruct-align/1grj_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1grj_2/nostruct-align/1grj_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1grj_2/nostruct-align/1grj_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14357/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.296661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mdc
id: 1mdc   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mdc/nostruct-align/1mdc.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-194/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.982666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bucA_1
id: 1bucA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bucA_1/nostruct-align/1bucA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bucA_1/nostruct-align/1bucA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bucA_1/nostruct-align/1bucA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6997/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.763657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sblB_1
id: 2sblB_1   alignment found: /projects/compbio4/experiments/models.97/domains/2s/2sblB_1/nostruct-align/2sblB_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2s/2sblB_1/nostruct-align/2sblB_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2s/2sblB_1/nostruct-align/2sblB_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5380/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lct
id: 1lct   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lct/nostruct-align/1lct.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17227/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.892654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1molA
id: 1molA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1molA/nostruct-align/1molA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19024/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.752670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mntA
id: 1mntA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mntA/nostruct-align/1mntA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18719/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.816666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lxa
id: 1lxa   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lxa/nostruct-align/1lxa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15668/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.688660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2reb_2
id: 2reb_2   alignment found: /projects/compbio4/experiments/models.97/domains/2r/2reb_2/nostruct-align/2reb_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2r/2reb_2/nostruct-align/2reb_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2r/2reb_2/nostruct-align/2reb_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18927/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -16.764664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poxA_1
id: 1poxA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1poxA_1/nostruct-align/1poxA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1poxA_1/nostruct-align/1poxA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1poxA_1/nostruct-align/1poxA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10951/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.485672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bucA_2
id: 1bucA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bucA_2/nostruct-align/1bucA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bucA_2/nostruct-align/1bucA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bucA_2/nostruct-align/1bucA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3266/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.877655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mal
id: 1mal   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mal/nostruct-align/1mal.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4306/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.366653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvp1_1
id: 1bvp1_1   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bvp1_1/nostruct-align/1bvp1_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bvp1_1/nostruct-align/1bvp1_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bvp1_1/nostruct-align/1bvp1_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2783/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.757660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvp1_2
id: 1bvp1_2   alignment found: /projects/compbio4/experiments/models.97/domains/1b/1bvp1_2/nostruct-align/1bvp1_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1b/1bvp1_2/nostruct-align/1bvp1_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1b/1bvp1_2/nostruct-align/1bvp1_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.894669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1minA
id: 1minA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1minA/nostruct-align/1minA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1minA/nostruct-align/1minA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1minA/nostruct-align/1minA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-11622/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.726669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdg_1
id: 1cdg_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cdg_1/nostruct-align/1cdg_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cdg_1/nostruct-align/1cdg_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cdg_1/nostruct-align/1cdg_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6722/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.237656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1msaA
id: 1msaA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1msaA/nostruct-align/1msaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17862/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.445663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2reb_1
id: 2reb_1   alignment found: /projects/compbio4/experiments/models.97/domains/2r/2reb_1/nostruct-align/2reb_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2r/2reb_1/nostruct-align/2reb_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2r/2reb_1/nostruct-align/2reb_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26273/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.176666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mup
id: 1mup   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mup/nostruct-align/1mup.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31492/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.557663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdg_2
id: 1cdg_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cdg_2/nostruct-align/1cdg_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cdg_2/nostruct-align/1cdg_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cdg_2/nostruct-align/1cdg_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21082/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2polA_3
id: 2polA_3   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2polA_3/nostruct-align/2polA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2polA_3/nostruct-align/2polA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2polA_3/nostruct-align/2polA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21593/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.519669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apmE
id: 1apmE   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apmE/nostruct-align/1apmE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4239/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.671661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mmoG
id: 1mmoG   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mmoG/nostruct-align/1mmoG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8008/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.828659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2polA_2
id: 2polA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2polA_2/nostruct-align/2polA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2polA_2/nostruct-align/2polA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2polA_2/nostruct-align/2polA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31601/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.789673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdg_3
id: 1cdg_3   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cdg_3/nostruct-align/1cdg_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cdg_3/nostruct-align/1cdg_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cdg_3/nostruct-align/1cdg_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30634/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.706665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kst
id: 1kst   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kst/nostruct-align/1kst.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28971/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.262665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mykA
id: 1mykA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mykA/nostruct-align/1mykA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31278/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.416656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mut
id: 1mut   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mut/nostruct-align/1mut.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1942/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.854675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2polA_1
id: 2polA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2polA_1/nostruct-align/2polA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2polA_1/nostruct-align/2polA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2polA_1/nostruct-align/2polA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28276/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.637665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pia_3
id: 2pia_3   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2pia_3/nostruct-align/2pia_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2pia_3/nostruct-align/2pia_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2pia_3/nostruct-align/2pia_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12980/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.233658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pia_2
id: 2pia_2   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2pia_2/nostruct-align/2pia_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2pia_2/nostruct-align/2pia_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2pia_2/nostruct-align/2pia_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.145660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pia_1
id: 2pia_1   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2pia_1/nostruct-align/2pia_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2pia_1/nostruct-align/2pia_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2pia_1/nostruct-align/2pia_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29531/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.490662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pgd_2
id: 2pgd_2   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2pgd_2/nostruct-align/2pgd_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2pgd_2/nostruct-align/2pgd_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2pgd_2/nostruct-align/2pgd_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30805/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.630661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1minB
id: 1minB   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1minB/nostruct-align/1minB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1minB/nostruct-align/1minB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1minB/nostruct-align/1minB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-10511/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.979660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pgd_1
id: 2pgd_1   alignment found: /projects/compbio4/experiments/models.97/domains/2p/2pgd_1/nostruct-align/2pgd_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2p/2pgd_1/nostruct-align/2pgd_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2p/2pgd_1/nostruct-align/2pgd_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22590/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.508652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mmoB
id: 1mmoB   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mmoB/nostruct-align/1mmoB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16865/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.116669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mpp
id: 1mpp   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mpp/nostruct-align/1mpp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6339/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.242676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mrj
id: 1mrj   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mrj/nostruct-align/1mrj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15247/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.380661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ohxA_2
id: 2ohxA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2o/2ohxA_2/nostruct-align/2ohxA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2o/2ohxA_2/nostruct-align/2ohxA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2o/2ohxA_2/nostruct-align/2ohxA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4220/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.213669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ohxA_1
id: 2ohxA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2o/2ohxA_1/nostruct-align/2ohxA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2o/2ohxA_1/nostruct-align/2ohxA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2o/2ohxA_1/nostruct-align/2ohxA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5935/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.703674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mpb
id: 1mpb   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mpb/nostruct-align/1mpb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29915/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.964661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdg_4
id: 1cdg_4   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cdg_4/nostruct-align/1cdg_4.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cdg_4/nostruct-align/1cdg_4.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cdg_4/nostruct-align/1cdg_4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7233/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.853668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nacA_2
id: 2nacA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2n/2nacA_2/nostruct-align/2nacA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2n/2nacA_2/nostruct-align/2nacA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2n/2nacA_2/nostruct-align/2nacA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24596/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.904663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nacA_1
id: 2nacA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2n/2nacA_1/nostruct-align/2nacA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2n/2nacA_1/nostruct-align/2nacA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2n/2nacA_1/nostruct-align/2nacA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.503662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mbd
id: 1mbd   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mbd/nostruct-align/1mbd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29840/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.450653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1neq
id: 1neq   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1neq/nostruct-align/1neq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25222/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.652664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1npk
id: 1npk   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1npk/nostruct-align/1npk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21373/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.876663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1omc
id: 1omc   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1omc/nostruct-align/1omc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1omc/nostruct-align/1omc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1omc/nostruct-align/1omc.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-9679/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.157669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1olgA
id: 1olgA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1olgA/nostruct-align/1olgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20548/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.860657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1noa
id: 1noa   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1noa/nostruct-align/1noa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27086/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.695663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1napA
id: 1napA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1napA/nostruct-align/1napA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-16707/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.721664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1omn
id: 1omn   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1omn/nostruct-align/1omn.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-11627/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.346664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nfp
id: 1nfp   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nfp/nostruct-align/1nfp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7687/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.094666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1otgA
id: 1otgA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1otgA/nostruct-align/1otgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.239670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1onc
id: 1onc   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1onc/nostruct-align/1onc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14679/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.687668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2kauC_1
id: 2kauC_1   alignment found: /projects/compbio4/experiments/models.97/domains/2k/2kauC_1/nostruct-align/2kauC_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2k/2kauC_1/nostruct-align/2kauC_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2k/2kauC_1/nostruct-align/2kauC_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31391/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.643661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1otfA
id: 1otfA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1otfA/nostruct-align/1otfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12173/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.394669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hft_2
id: 2hft_2   alignment found: /projects/compbio4/experiments/models.97/domains/2h/2hft_2/nostruct-align/2hft_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2h/2hft_2/nostruct-align/2hft_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2h/2hft_2/nostruct-align/2hft_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9200/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.733673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1paa
id: 1paa   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1paa/nostruct-align/1paa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18365/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.674667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1grj_1
id: 1grj_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1grj_1/nostruct-align/1grj_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1grj_1/nostruct-align/1grj_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1grj_1/nostruct-align/1grj_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2461/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.240662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hft_1
id: 2hft_1   alignment found: /projects/compbio4/experiments/models.97/domains/2h/2hft_1/nostruct-align/2hft_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2h/2hft_1/nostruct-align/2hft_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2h/2hft_1/nostruct-align/2hft_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23683/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.761658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pba
id: 1pba   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pba/nostruct-align/1pba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28996/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.807663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1opr
id: 1opr   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1opr/nostruct-align/1opr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6700/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.709671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gstA_2
id: 2gstA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2g/2gstA_2/nostruct-align/2gstA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2g/2gstA_2/nostruct-align/2gstA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2g/2gstA_2/nostruct-align/2gstA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31903/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.425659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nal1
id: 1nal1   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nal1/nostruct-align/1nal1.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-8260/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.429657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ntr
id: 1ntr   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ntr/nostruct-align/1ntr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21205/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.785660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gstA_1
id: 2gstA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2g/2gstA_1/nostruct-align/2gstA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2g/2gstA_1/nostruct-align/2gstA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2g/2gstA_1/nostruct-align/2gstA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15812/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.899658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cgpA_1
id: 1cgpA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cgpA_1/nostruct-align/1cgpA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cgpA_1/nostruct-align/1cgpA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cgpA_1/nostruct-align/1cgpA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14419/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.479660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbn
id: 1pbn   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pbn/nostruct-align/1pbn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32579/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.722672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pce
id: 1pce   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pce/nostruct-align/1pce.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27944/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.162659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2glt_2
id: 2glt_2   alignment found: /projects/compbio4/experiments/models.97/domains/2g/2glt_2/nostruct-align/2glt_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2g/2glt_2/nostruct-align/2glt_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2g/2glt_2/nostruct-align/2glt_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21459/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.571671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mmoD
id: 1mmoD   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mmoD/nostruct-align/1mmoD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23230/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.612656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pdc
id: 1pdc   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pdc/nostruct-align/1pdc.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22375/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.227661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2glt_1
id: 2glt_1   alignment found: /projects/compbio4/experiments/models.97/domains/2g/2glt_1/nostruct-align/2glt_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2g/2glt_1/nostruct-align/2glt_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2g/2glt_1/nostruct-align/2glt_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20850/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.424667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pdgA
id: 1pdgA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pdgA/nostruct-align/1pdgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9382/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.704666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbp
id: 1pbp   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pbp/nostruct-align/1pbp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19256/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.962677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2drpA_2
id: 2drpA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2d/2drpA_2/nostruct-align/2drpA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2d/2drpA_2/nostruct-align/2drpA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2d/2drpA_2/nostruct-align/2drpA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23399/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.572662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nar
id: 1nar   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nar/nostruct-align/1nar.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12534/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.847672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pdnC
id: 1pdnC   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pdnC/nostruct-align/1pdnC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19556/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.773651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cgpA_2
id: 1cgpA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cgpA_2/nostruct-align/1cgpA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cgpA_2/nostruct-align/1cgpA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cgpA_2/nostruct-align/1cgpA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-79/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.714661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1osa
id: 1osa   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1osa/nostruct-align/1osa.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24813/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.080673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2drpA_1
id: 2drpA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2d/2drpA_1/nostruct-align/2drpA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2d/2drpA_1/nostruct-align/2drpA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2d/2drpA_1/nostruct-align/2drpA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29298/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.958664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oya
id: 1oya   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oya/nostruct-align/1oya.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15688/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.229660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chmA_1
id: 1chmA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1chmA_1/nostruct-align/1chmA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1chmA_1/nostruct-align/1chmA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1chmA_1/nostruct-align/1chmA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31669/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.046661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pcl
id: 1pcl   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pcl/nostruct-align/1pcl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17926/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.490662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ovaA
id: 1ovaA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ovaA/nostruct-align/1ovaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-706/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.588654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dln_2
id: 2dln_2   alignment found: /projects/compbio4/experiments/models.97/domains/2d/2dln_2/nostruct-align/2dln_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2d/2dln_2/nostruct-align/2dln_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2d/2dln_2/nostruct-align/2dln_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21329/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dln_1
id: 2dln_1   alignment found: /projects/compbio4/experiments/models.97/domains/2d/2dln_1/nostruct-align/2dln_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2d/2dln_1/nostruct-align/2dln_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2d/2dln_1/nostruct-align/2dln_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6756/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.845657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pea
id: 1pea   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pea/nostruct-align/1pea.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18963/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.165665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pht
id: 1pht   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pht/nostruct-align/1pht.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-8327/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -47.799660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dldA_2
id: 2dldA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2d/2dldA_2/nostruct-align/2dldA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2d/2dldA_2/nostruct-align/2dldA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2d/2dldA_2/nostruct-align/2dldA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10623/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.607666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nscA
id: 1nscA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nscA/nostruct-align/1nscA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19960/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.495667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pfkA
id: 1pfkA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pfkA/nostruct-align/1pfkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17776/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.776672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dldA_1
id: 2dldA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2d/2dldA_1/nostruct-align/2dldA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2d/2dldA_1/nostruct-align/2dldA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2d/2dldA_1/nostruct-align/2dldA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10921/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.259674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1phr
id: 1phr   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1phr/nostruct-align/1phr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-130/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.993652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pk4
id: 1pk4   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pk4/nostruct-align/1pk4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30139/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.671661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cnd_2
id: 2cnd_2   alignment found: /projects/compbio4/experiments/models.97/domains/2c/2cnd_2/nostruct-align/2cnd_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2c/2cnd_2/nostruct-align/2cnd_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2c/2cnd_2/nostruct-align/2cnd_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19169/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.556671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pil
id: 1pil   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pil/nostruct-align/1pil.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1102/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.550659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cnd_1
id: 2cnd_1   alignment found: /projects/compbio4/experiments/models.97/domains/2c/2cnd_1/nostruct-align/2cnd_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2c/2cnd_1/nostruct-align/2cnd_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2c/2cnd_1/nostruct-align/2cnd_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17745/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.564667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mysB
id: 1mysB   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mysB/nostruct-align/1mysB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mysB/nostruct-align/1mysB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mysB/nostruct-align/1mysB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16635/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.707657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chmA_2
id: 1chmA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1chmA_2/nostruct-align/1chmA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1chmA_2/nostruct-align/1chmA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1chmA_2/nostruct-align/1chmA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12087/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.204666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cmd_2
id: 2cmd_2   alignment found: /projects/compbio4/experiments/models.97/domains/2c/2cmd_2/nostruct-align/2cmd_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2c/2cmd_2/nostruct-align/2cmd_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2c/2cmd_2/nostruct-align/2cmd_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4475/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.603653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cid_1
id: 1cid_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cid_1/nostruct-align/1cid_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cid_1/nostruct-align/1cid_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cid_1/nostruct-align/1cid_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7983/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.360657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cid_2
id: 1cid_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1cid_2/nostruct-align/1cid_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1cid_2/nostruct-align/1cid_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1cid_2/nostruct-align/1cid_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18117/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.182663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cmd_1
id: 2cmd_1   alignment found: /projects/compbio4/experiments/models.97/domains/2c/2cmd_1/nostruct-align/2cmd_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2c/2cmd_1/nostruct-align/2cmd_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2c/2cmd_1/nostruct-align/2cmd_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32363/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.672653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2chr_2
id: 2chr_2   alignment found: /projects/compbio4/experiments/models.97/domains/2c/2chr_2/nostruct-align/2chr_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2c/2chr_2/nostruct-align/2chr_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2c/2chr_2/nostruct-align/2chr_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24022/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.174652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pnrA_2
id: 1pnrA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pnrA_2/nostruct-align/1pnrA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pnrA_2/nostruct-align/1pnrA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pnrA_2/nostruct-align/1pnrA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2378/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.614655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpmA_3
id: 1gpmA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gpmA_3/nostruct-align/1gpmA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gpmA_3/nostruct-align/1gpmA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gpmA_3/nostruct-align/1gpmA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3449/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.140656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nipA
id: 1nipA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nipA/nostruct-align/1nipA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.751663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2chr_1
id: 2chr_1   alignment found: /projects/compbio4/experiments/models.97/domains/2c/2chr_1/nostruct-align/2chr_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2c/2chr_1/nostruct-align/2chr_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2c/2chr_1/nostruct-align/2chr_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28136/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.707672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pnrA_1
id: 1pnrA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pnrA_1/nostruct-align/1pnrA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pnrA_1/nostruct-align/1pnrA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pnrA_1/nostruct-align/1pnrA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32222/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.337662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1php
id: 1php   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1php/nostruct-align/1php.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29345/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.266663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2btfA_2
id: 2btfA_2   alignment found: /projects/compbio4/experiments/models.97/domains/2b/2btfA_2/nostruct-align/2btfA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2b/2btfA_2/nostruct-align/2btfA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2b/2btfA_2/nostruct-align/2btfA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1796/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.481659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2btfA_1
id: 2btfA_1   alignment found: /projects/compbio4/experiments/models.97/domains/2b/2btfA_1/nostruct-align/2btfA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2b/2btfA_1/nostruct-align/2btfA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2b/2btfA_1/nostruct-align/2btfA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24154/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.586655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bb2_2
id: 2bb2_2   alignment found: /projects/compbio4/experiments/models.97/domains/2b/2bb2_2/nostruct-align/2bb2_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2b/2bb2_2/nostruct-align/2bb2_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2b/2bb2_2/nostruct-align/2bb2_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24665/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.449661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bb2_1
id: 2bb2_1   alignment found: /projects/compbio4/experiments/models.97/domains/2b/2bb2_1/nostruct-align/2bb2_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2b/2bb2_1/nostruct-align/2bb2_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2b/2bb2_1/nostruct-align/2bb2_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5038/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.533661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oxa
id: 1oxa   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oxa/nostruct-align/1oxa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30228/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.227661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpmA_2
id: 1gpmA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gpmA_2/nostruct-align/1gpmA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gpmA_2/nostruct-align/1gpmA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gpmA_2/nostruct-align/1gpmA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13272/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.262665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nciA
id: 1nciA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nciA/nostruct-align/1nciA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18130/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.272659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nbaA
id: 1nbaA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nbaA/nostruct-align/1nbaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4523/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.709656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1plq_2
id: 1plq_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1plq_2/nostruct-align/1plq_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1plq_2/nostruct-align/1plq_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1plq_2/nostruct-align/1plq_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28943/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.287674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpmA_1
id: 1gpmA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gpmA_1/nostruct-align/1gpmA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gpmA_1/nostruct-align/1gpmA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gpmA_1/nostruct-align/1gpmA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ach_1a1
id: 2ach_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/2a/2ach_1a1/nostruct-align/2ach_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2a/2ach_1a1/nostruct-align/2ach_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2a/2ach_1a1/nostruct-align/2ach_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22576/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.504654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pnh
id: 1pnh   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pnh/nostruct-align/1pnh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12644/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.511658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prtD
id: 1prtD   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prtD/nostruct-align/1prtD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16196/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.429672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prtF
id: 1prtF   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prtF/nostruct-align/1prtF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17296/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.969666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pse
id: 1pse   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pse/nostruct-align/1pse.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32456/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -13.581665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1plc
id: 1plc   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1plc/nostruct-align/1plc.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10086/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.863663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1plq_1
id: 1plq_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1plq_1/nostruct-align/1plq_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1plq_1/nostruct-align/1plq_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1plq_1/nostruct-align/1plq_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32161/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.300674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poa
id: 1poa   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1poa/nostruct-align/1poa.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23304/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.163666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pls
id: 1pls   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pls/nostruct-align/1pls.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29367/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.031662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pmc
id: 1pmc   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pmc/nostruct-align/1pmc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14738/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.768661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prn
id: 1prn   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prn/nostruct-align/1prn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1613/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.959656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poh
id: 1poh   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1poh/nostruct-align/1poh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15919/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.643661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prtA
id: 1prtA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prtA/nostruct-align/1prtA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-4755/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.587677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pne
id: 1pne   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pne/nostruct-align/1pne.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23764/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.750656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ptf
id: 1ptf   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ptf/nostruct-align/1ptf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27929/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.174667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvuA
id: 1pvuA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pvuA/nostruct-align/1pvuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-705/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.611664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pta
id: 1pta   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pta/nostruct-align/1pta.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3255/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.610672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1put
id: 1put   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1put/nostruct-align/1put.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6552/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.042664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pyp
id: 1pyp   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pyp/nostruct-align/1pyp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10614/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.238663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ptq
id: 1ptq   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ptq/nostruct-align/1ptq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10391/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.679657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gph1_2
id: 1gph1_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gph1_2/nostruct-align/1gph1_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gph1_2/nostruct-align/1gph1_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gph1_2/nostruct-align/1gph1_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4264/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.613663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1clc_1
id: 1clc_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1clc_1/nostruct-align/1clc_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1clc_1/nostruct-align/1clc_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1clc_1/nostruct-align/1clc_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6264/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.177658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1r69
id: 1r69   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1r69/nostruct-align/1r69.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16997/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prcC
id: 1prcC   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prcC/nostruct-align/1prcC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16557/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.758667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1clc_2
id: 1clc_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1clc_2/nostruct-align/1clc_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1clc_2/nostruct-align/1clc_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1clc_2/nostruct-align/1clc_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6347/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.847672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pkyA_3
id: 1pkyA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pkyA_3/nostruct-align/1pkyA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pkyA_3/nostruct-align/1pkyA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pkyA_3/nostruct-align/1pkyA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32106/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.458664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2aaa_2
id: 2aaa_2   alignment found: /projects/compbio4/experiments/models.97/domains/2a/2aaa_2/nostruct-align/2aaa_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/2a/2aaa_2/nostruct-align/2aaa_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/2a/2aaa_2/nostruct-align/2aaa_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15458/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.498657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wgtA_3
id: 1wgtA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1w/1wgtA_3/nostruct-align/1wgtA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1w/1wgtA_3/nostruct-align/1wgtA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1w/1wgtA_3/nostruct-align/1wgtA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24711/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.641663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gph1_1
id: 1gph1_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gph1_1/nostruct-align/1gph1_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gph1_1/nostruct-align/1gph1_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gph1_1/nostruct-align/1gph1_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1802/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.360657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rcd
id: 1rcd   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rcd/nostruct-align/1rcd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-11754/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.950653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wgtA_2
id: 1wgtA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1w/1wgtA_2/nostruct-align/1wgtA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1w/1wgtA_2/nostruct-align/1wgtA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1w/1wgtA_2/nostruct-align/1wgtA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21554/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.323654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wgtA_1
id: 1wgtA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1w/1wgtA_1/nostruct-align/1wgtA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1w/1wgtA_1/nostruct-align/1wgtA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1w/1wgtA_1/nostruct-align/1wgtA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12962/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.927658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvc3
id: 1pvc3   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pvc3/nostruct-align/1pvc3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpb
id: 1gpb   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gpb/nostruct-align/1gpb.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16823/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.805664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1coy_1
id: 1coy_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1coy_1/nostruct-align/1coy_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1coy_1/nostruct-align/1coy_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1coy_1/nostruct-align/1coy_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4752/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.747665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pkyA_2
id: 1pkyA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pkyA_2/nostruct-align/1pkyA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pkyA_2/nostruct-align/1pkyA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pkyA_2/nostruct-align/1pkyA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13530/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.664658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vcaA_2
id: 1vcaA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1v/1vcaA_2/nostruct-align/1vcaA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1v/1vcaA_2/nostruct-align/1vcaA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1v/1vcaA_2/nostruct-align/1vcaA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4681/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.291656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1coy_2
id: 1coy_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1coy_2/nostruct-align/1coy_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1coy_2/nostruct-align/1coy_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1coy_2/nostruct-align/1coy_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23681/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.317673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vcaA_1
id: 1vcaA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1v/1vcaA_1/nostruct-align/1vcaA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1v/1vcaA_1/nostruct-align/1vcaA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1v/1vcaA_1/nostruct-align/1vcaA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18925/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.621658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tssA_2
id: 1tssA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tssA_2/nostruct-align/1tssA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tssA_2/nostruct-align/1tssA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tssA_2/nostruct-align/1tssA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26701/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.909668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctl_1
id: 1ctl_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctl_1/nostruct-align/1ctl_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctl_1/nostruct-align/1ctl_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctl_1/nostruct-align/1ctl_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24843/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.772659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tssA_1
id: 1tssA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tssA_1/nostruct-align/1tssA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tssA_1/nostruct-align/1tssA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tssA_1/nostruct-align/1tssA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15046/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.458664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctl_2
id: 1ctl_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctl_2/nostruct-align/1ctl_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctl_2/nostruct-align/1ctl_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctl_2/nostruct-align/1ctl_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7934/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.316666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pmy
id: 1pmy   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pmy/nostruct-align/1pmy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9444/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.252670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1trkA_3
id: 1trkA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1trkA_3/nostruct-align/1trkA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1trkA_3/nostruct-align/1trkA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1trkA_3/nostruct-align/1trkA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22420/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.247665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctm_1
id: 1ctm_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctm_1/nostruct-align/1ctm_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctm_1/nostruct-align/1ctm_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctm_1/nostruct-align/1ctm_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27635/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.102676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1trkA_2
id: 1trkA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1trkA_2/nostruct-align/1trkA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1trkA_2/nostruct-align/1trkA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1trkA_2/nostruct-align/1trkA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3039/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.907669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctm_2
id: 1ctm_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctm_2/nostruct-align/1ctm_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctm_2/nostruct-align/1ctm_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctm_2/nostruct-align/1ctm_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19289/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.594666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctn_1
id: 1ctn_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctn_1/nostruct-align/1ctn_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctn_1/nostruct-align/1ctn_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctn_1/nostruct-align/1ctn_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31062/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.786667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gof_3
id: 1gof_3   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gof_3/nostruct-align/1gof_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gof_3/nostruct-align/1gof_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gof_3/nostruct-align/1gof_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12549/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.062653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poc
id: 1poc   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1poc/nostruct-align/1poc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.421677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1phb
id: 1phb   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1phb/nostruct-align/1phb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13481/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.396667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pkyA_1
id: 1pkyA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pkyA_1/nostruct-align/1pkyA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pkyA_1/nostruct-align/1pkyA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pkyA_1/nostruct-align/1pkyA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9802/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.694656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1trkA_1
id: 1trkA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1trkA_1/nostruct-align/1trkA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1trkA_1/nostruct-align/1trkA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1trkA_1/nostruct-align/1trkA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5762/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1res
id: 1res   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1res/nostruct-align/1res.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2278/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.877670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tpg_2
id: 1tpg_2   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tpg_2/nostruct-align/1tpg_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tpg_2/nostruct-align/1tpg_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tpg_2/nostruct-align/1tpg_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28130/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.261673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ris
id: 1ris   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ris/nostruct-align/1ris.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30989/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.369659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rvaA
id: 1rvaA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rvaA/nostruct-align/1rvaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32427/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.328659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tpg_1
id: 1tpg_1   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tpg_1/nostruct-align/1tpg_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tpg_1/nostruct-align/1tpg_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tpg_1/nostruct-align/1tpg_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15793/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.458664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rfbA
id: 1rfbA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rfbA/nostruct-align/1rfbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13610/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.790665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tde_2
id: 1tde_2   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tde_2/nostruct-align/1tde_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tde_2/nostruct-align/1tde_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tde_2/nostruct-align/1tde_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9959/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.668655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1regX
id: 1regX   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1regX/nostruct-align/1regX.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24415/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.469666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rpl
id: 1rpl   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpl/nostruct-align/1rpl.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-4181/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.071655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rsy
id: 1rsy   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rsy/nostruct-align/1rsy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.013657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rro
id: 1rro   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rro/nostruct-align/1rro.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.633667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvc1
id: 1pvc1   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pvc1/nostruct-align/1pvc1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17215/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.496674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctn_2
id: 1ctn_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctn_2/nostruct-align/1ctn_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctn_2/nostruct-align/1ctn_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctn_2/nostruct-align/1ctn_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10081/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.039658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sceA
id: 1sceA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sceA/nostruct-align/1sceA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-10396/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.553665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tde_1
id: 1tde_1   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tde_1/nostruct-align/1tde_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tde_1/nostruct-align/1tde_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tde_1/nostruct-align/1tde_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.694672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctn_3
id: 1ctn_3   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctn_3/nostruct-align/1ctn_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctn_3/nostruct-align/1ctn_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctn_3/nostruct-align/1ctn_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31691/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.632660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rmi
id: 1rmi   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rmi/nostruct-align/1rmi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9644/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.461655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sbp
id: 1sbp   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sbp/nostruct-align/1sbp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21812/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.652664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rec
id: 1rec   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rec/nostruct-align/1rec.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30200/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.026657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hpm_1
id: 1hpm_1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hpm_1/nostruct-align/1hpm_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hpm_1/nostruct-align/1hpm_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hpm_1/nostruct-align/1hpm_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17095/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.341660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1semA
id: 1semA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1semA/nostruct-align/1semA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7621/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -39.434662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scs
id: 1scs   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1scs/nostruct-align/1scs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1952/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.076675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctt_1
id: 1ctt_1   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctt_1/nostruct-align/1ctt_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctt_1/nostruct-align/1ctt_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctt_1/nostruct-align/1ctt_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.126663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tadA_2
id: 1tadA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tadA_2/nostruct-align/1tadA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tadA_2/nostruct-align/1tadA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tadA_2/nostruct-align/1tadA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17123/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.341660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sgc
id: 1sgc   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sgc/nostruct-align/1sgc.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-9644/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.341660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sgpI
id: 1sgpI   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sgpI/nostruct-align/1sgpI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26294/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.248657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rip
id: 1rip   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rip/nostruct-align/1rip.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19393/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.281662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sh1
id: 1sh1   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sh1/nostruct-align/1sh1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.651672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scmB
id: 1scmB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1scmB/nostruct-align/1scmB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-11767/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.871658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sacA
id: 1sacA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sacA/nostruct-align/1sacA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16009/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.175674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctt_2
id: 1ctt_2   alignment found: /projects/compbio4/experiments/models.97/domains/1c/1ctt_2/nostruct-align/1ctt_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1c/1ctt_2/nostruct-align/1ctt_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1c/1ctt_2/nostruct-align/1ctt_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21328/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.781662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tadA_1
id: 1tadA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1t/1tadA_1/nostruct-align/1tadA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1t/1tadA_1/nostruct-align/1tadA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1t/1tadA_1/nostruct-align/1tadA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8512/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.729660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rpa
id: 1rpa   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpa/nostruct-align/1rpa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21159/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.755661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d66A_1
id: 1d66A_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1d66A_1/nostruct-align/1d66A_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1d66A_1/nostruct-align/1d66A_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1d66A_1/nostruct-align/1d66A_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29596/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.383667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rpo
id: 1rpo   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpo/nostruct-align/1rpo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21811/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.088669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvdA_2
id: 1pvdA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pvdA_2/nostruct-align/1pvdA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pvdA_2/nostruct-align/1pvdA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pvdA_2/nostruct-align/1pvdA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28664/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.627655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ribA
id: 1ribA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ribA/nostruct-align/1ribA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-10447/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.468658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddt_1
id: 1ddt_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1ddt_1/nostruct-align/1ddt_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1ddt_1/nostruct-align/1ddt_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1ddt_1/nostruct-align/1ddt_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21675/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.261658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddt_2
id: 1ddt_2   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1ddt_2/nostruct-align/1ddt_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1ddt_2/nostruct-align/1ddt_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1ddt_2/nostruct-align/1ddt_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21210/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.545670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mml
id: 1mml   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mml/nostruct-align/1mml.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14842/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.584656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddt_3
id: 1ddt_3   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1ddt_3/nostruct-align/1ddt_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1ddt_3/nostruct-align/1ddt_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1ddt_3/nostruct-align/1ddt_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3461/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.907669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smpI
id: 1smpI   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smpI/nostruct-align/1smpI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8027/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.524673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1stfI
id: 1stfI   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1stfI/nostruct-align/1stfI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9295/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.809662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1stu
id: 1stu   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1stu/nostruct-align/1stu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13211/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.971649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sty
id: 1sty   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sty/nostruct-align/1sty.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-12382/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.005661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1std
id: 1std   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1std/nostruct-align/1std.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29116/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.215668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sriA
id: 1sriA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sriA/nostruct-align/1sriA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18516/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.671661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sso
id: 1sso   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sso/nostruct-align/1sso.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28493/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.823669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hplA_2
id: 1hplA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hplA_2/nostruct-align/1hplA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hplA_2/nostruct-align/1hplA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hplA_2/nostruct-align/1hplA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26546/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.554672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dih_1
id: 1dih_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dih_1/nostruct-align/1dih_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dih_1/nostruct-align/1dih_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dih_1/nostruct-align/1dih_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31553/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.534668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1shfA
id: 1shfA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1shfA/nostruct-align/1shfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13591/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.120659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tabI
id: 1tabI   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tabI/nostruct-align/1tabI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1263/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.127655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1svq
id: 1svq   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1svq/nostruct-align/1svq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26836/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.076660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1spbP
id: 1spbP   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1spbP/nostruct-align/1spbP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24103/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.138657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pspA_2
id: 1pspA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pspA_2/nostruct-align/1pspA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pspA_2/nostruct-align/1pspA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pspA_2/nostruct-align/1pspA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8601/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.795654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tca
id: 1tca   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tca/nostruct-align/1tca.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12624/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.642670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1shg
id: 1shg   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1shg/nostruct-align/1shg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27217/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -39.635658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dih_2
id: 1dih_2   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dih_2/nostruct-align/1dih_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dih_2/nostruct-align/1dih_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dih_2/nostruct-align/1dih_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13952/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.236664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tfi
id: 1tfi   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tfi/nostruct-align/1tfi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6085/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.852661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tap
id: 1tap   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tap/nostruct-align/1tap.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31379/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.864670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sra
id: 1sra   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sra/nostruct-align/1sra.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31866/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.649658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1setA_2
id: 1setA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1setA_2/nostruct-align/1setA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1setA_2/nostruct-align/1setA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1setA_2/nostruct-align/1setA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1256/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.777664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smvA
id: 1smvA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smvA/nostruct-align/1smvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6408/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.942657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sxl
id: 1sxl   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sxl/nostruct-align/1sxl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24042/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.150650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hplA_1
id: 1hplA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hplA_1/nostruct-align/1hplA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hplA_1/nostruct-align/1hplA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hplA_1/nostruct-align/1hplA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3888/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.121674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tgxA
id: 1tgxA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tgxA/nostruct-align/1tgxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4661/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.952652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvc2
id: 1pvc2   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pvc2/nostruct-align/1pvc2.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-8553/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.193649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tfg
id: 1tfg   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tfg/nostruct-align/1tfg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26543/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.288666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tif
id: 1tif   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tif/nostruct-align/1tif.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.946671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1thtA
id: 1thtA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1thtA/nostruct-align/1thtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6253/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.230667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tgsI
id: 1tgsI   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tgsI/nostruct-align/1tgsI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22735/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.077667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pspA_1
id: 1pspA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pspA_1/nostruct-align/1pspA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pspA_1/nostruct-align/1pspA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pspA_1/nostruct-align/1pspA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.837662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rcf
id: 1rcf   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rcf/nostruct-align/1rcf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12342/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.654663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tie
id: 1tie   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tie/nostruct-align/1tie.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-12319/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.448654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ten
id: 1ten   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1ten/nostruct-align/1ten.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16298/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.965652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tig
id: 1tig   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tig/nostruct-align/1tig.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14346/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.474655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tin
id: 1tin   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tin/nostruct-align/1tin.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-7167/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.987671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tns
id: 1tns   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tns/nostruct-align/1tns.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8816/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.468658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1setA_1
id: 1setA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1setA_1/nostruct-align/1setA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1setA_1/nostruct-align/1setA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1setA_1/nostruct-align/1setA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32471/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.215668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1shaA
id: 1shaA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1shaA/nostruct-align/1shaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15166/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.040665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tahB
id: 1tahB   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tahB/nostruct-align/1tahB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30892/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.142670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1se2_2
id: 1se2_2   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1se2_2/nostruct-align/1se2_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1se2_2/nostruct-align/1se2_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1se2_2/nostruct-align/1se2_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6741/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.430664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1se2_1
id: 1se2_1   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1se2_1/nostruct-align/1se2_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1se2_1/nostruct-align/1se2_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1se2_1/nostruct-align/1se2_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24502/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.745667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tml
id: 1tml   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tml/nostruct-align/1tml.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15434/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tnfA
id: 1tnfA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tnfA/nostruct-align/1tnfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-11989/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.370667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1thw
id: 1thw   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1thw/nostruct-align/1thw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8673/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.190659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tpfA
id: 1tpfA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tpfA/nostruct-align/1tpfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16474/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.597656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tsp
id: 1tsp   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tsp/nostruct-align/1tsp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4800/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.475677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scuB_2
id: 1scuB_2   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1scuB_2/nostruct-align/1scuB_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1scuB_2/nostruct-align/1scuB_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1scuB_2/nostruct-align/1scuB_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15966/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.627670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tlk
id: 1tlk   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tlk/nostruct-align/1tlk.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9343/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.850662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scuB_1
id: 1scuB_1   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1scuB_1/nostruct-align/1scuB_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1scuB_1/nostruct-align/1scuB_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1scuB_1/nostruct-align/1scuB_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2446/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.308655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tib
id: 1tib   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tib/nostruct-align/1tib.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1486/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.272659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scuA_2
id: 1scuA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1scuA_2/nostruct-align/1scuA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1scuA_2/nostruct-align/1scuA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1scuA_2/nostruct-align/1scuA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27510/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.828659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1slaA
id: 1slaA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1slaA/nostruct-align/1slaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28064/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.989670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hlpA_2
id: 1hlpA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hlpA_2/nostruct-align/1hlpA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hlpA_2/nostruct-align/1hlpA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hlpA_2/nostruct-align/1hlpA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14855/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.314667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tlfA
id: 1tlfA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tlfA/nostruct-align/1tlfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1241/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.605667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tys
id: 1tys   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tys/nostruct-align/1tys.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21847/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.677658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scuA_1
id: 1scuA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1s/1scuA_1/nostruct-align/1scuA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1s/1scuA_1/nostruct-align/1scuA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1s/1scuA_1/nostruct-align/1scuA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.783676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1psdA_3
id: 1psdA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1psdA_3/nostruct-align/1psdA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1psdA_3/nostruct-align/1psdA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1psdA_3/nostruct-align/1psdA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19341/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.616653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rtm1_1
id: 1rtm1_1   alignment found: /projects/compbio4/experiments/models.97/domains/1r/1rtm1_1/nostruct-align/1rtm1_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1r/1rtm1_1/nostruct-align/1rtm1_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1r/1rtm1_1/nostruct-align/1rtm1_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16368/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1raaB_2
id: 1raaB_2   alignment found: /projects/compbio4/experiments/models.97/domains/1r/1raaB_2/nostruct-align/1raaB_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1r/1raaB_2/nostruct-align/1raaB_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1r/1raaB_2/nostruct-align/1raaB_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.446655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tupA
id: 1tupA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tupA/nostruct-align/1tupA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9707/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.009674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1raaB_1
id: 1raaB_1   alignment found: /projects/compbio4/experiments/models.97/domains/1r/1raaB_1/nostruct-align/1raaB_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1r/1raaB_1/nostruct-align/1raaB_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1r/1raaB_1/nostruct-align/1raaB_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30851/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.335663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hlpA_1
id: 1hlpA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hlpA_1/nostruct-align/1hlpA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hlpA_1/nostruct-align/1hlpA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hlpA_1/nostruct-align/1hlpA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3396/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.279663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dik_1
id: 1dik_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dik_1/nostruct-align/1dik_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dik_1/nostruct-align/1dik_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dik_1/nostruct-align/1dik_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13868/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.096664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1raaA_2
id: 1raaA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1r/1raaA_2/nostruct-align/1raaA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1r/1raaA_2/nostruct-align/1raaA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1r/1raaA_2/nostruct-align/1raaA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6303/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.923660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1raaA_1
id: 1raaA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1r/1raaA_1/nostruct-align/1raaA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1r/1raaA_1/nostruct-align/1raaA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1r/1raaA_1/nostruct-align/1raaA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10598/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.690674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dik_2
id: 1dik_2   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dik_2/nostruct-align/1dik_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dik_2/nostruct-align/1dik_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dik_2/nostruct-align/1dik_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28373/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.647659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qorA_2
id: 1qorA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1q/1qorA_2/nostruct-align/1qorA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1q/1qorA_2/nostruct-align/1qorA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1q/1qorA_2/nostruct-align/1qorA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22980/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.585663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1psdA_2
id: 1psdA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1psdA_2/nostruct-align/1psdA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1psdA_2/nostruct-align/1psdA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1psdA_2/nostruct-align/1psdA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21587/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.216660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smnA
id: 1smnA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smnA/nostruct-align/1smnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6979/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.949661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tplA
id: 1tplA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tplA/nostruct-align/1tplA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2344/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.948654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dik_3
id: 1dik_3   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dik_3/nostruct-align/1dik_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dik_3/nostruct-align/1dik_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dik_3/nostruct-align/1dik_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28627/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.128662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vhh
id: 1vhh   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vhh/nostruct-align/1vhh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30398/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.205658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vig
id: 1vig   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vig/nostruct-align/1vig.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-153/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.160660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vmoA
id: 1vmoA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vmoA/nostruct-align/1vmoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5513/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.799652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tme1
id: 1tme1   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tme1/nostruct-align/1tme1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25265/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.117661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1udiI
id: 1udiI   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1udiI/nostruct-align/1udiI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16755/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.924667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qorA_1
id: 1qorA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1q/1qorA_1/nostruct-align/1qorA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1q/1qorA_1/nostruct-align/1qorA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1q/1qorA_1/nostruct-align/1qorA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28434/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.348663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tnm
id: 1tnm   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tnm/nostruct-align/1tnm.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-31041/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.714661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pyi_1a1
id: 1pyi_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pyi_1a1/nostruct-align/1pyi_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pyi_1a1/nostruct-align/1pyi_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pyi_1a1/nostruct-align/1pyi_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.414658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tnrA
id: 1tnrA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tnrA/nostruct-align/1tnrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26137/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.451660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pyiA_1
id: 1pyiA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pyiA_1/nostruct-align/1pyiA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pyiA_1/nostruct-align/1pyiA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pyiA_1/nostruct-align/1pyiA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24583/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.453674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1utg
id: 1utg   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1utg/nostruct-align/1utg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19769/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.097672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlc_1
id: 1dlc_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dlc_1/nostruct-align/1dlc_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dlc_1/nostruct-align/1dlc_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dlc_1/nostruct-align/1dlc_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16910/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.316666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pya_1a1
id: 1pya_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pya_1a1/nostruct-align/1pya_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pya_1a1/nostruct-align/1pya_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pya_1a1/nostruct-align/1pya_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24023/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.375671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pxtA_2
id: 1pxtA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pxtA_2/nostruct-align/1pxtA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pxtA_2/nostruct-align/1pxtA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pxtA_2/nostruct-align/1pxtA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23942/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.736664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ukz
id: 1ukz   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ukz/nostruct-align/1ukz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24961/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.970657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1udg
id: 1udg   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1udg/nostruct-align/1udg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17189/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.223663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vil
id: 1vil   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vil/nostruct-align/1vil.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vil/nostruct-align/1vil.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vil/nostruct-align/1vil.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.557663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hle_1a1
id: 1hle_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hle_1a1/nostruct-align/1hle_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hle_1a1/nostruct-align/1hle_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hle_1a1/nostruct-align/1hle_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.514664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlc_2
id: 1dlc_2   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dlc_2/nostruct-align/1dlc_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dlc_2/nostruct-align/1dlc_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dlc_2/nostruct-align/1dlc_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2587/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.050659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1psdA_1
id: 1psdA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1psdA_1/nostruct-align/1psdA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1psdA_1/nostruct-align/1psdA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1psdA_1/nostruct-align/1psdA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.136658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1urnA
id: 1urnA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1urnA/nostruct-align/1urnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22963/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.450668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pxtA_1
id: 1pxtA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pxtA_1/nostruct-align/1pxtA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pxtA_1/nostruct-align/1pxtA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pxtA_1/nostruct-align/1pxtA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13056/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.296661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tpt
id: 1tpt   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tpt/nostruct-align/1tpt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16532/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.067657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vcc
id: 1vcc   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vcc/nostruct-align/1vcc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7416/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.241653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvdA_3
id: 1pvdA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pvdA_3/nostruct-align/1pvdA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pvdA_3/nostruct-align/1pvdA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pvdA_3/nostruct-align/1pvdA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30766/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.883667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prtB_2
id: 1prtB_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prtB_2/nostruct-align/1prtB_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prtB_2/nostruct-align/1prtB_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prtB_2/nostruct-align/1prtB_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23671/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.466675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prtB_1
id: 1prtB_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prtB_1/nostruct-align/1prtB_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prtB_1/nostruct-align/1prtB_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prtB_1/nostruct-align/1prtB_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28549/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.566666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlc_3
id: 1dlc_3   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dlc_3/nostruct-align/1dlc_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dlc_3/nostruct-align/1dlc_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dlc_3/nostruct-align/1dlc_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30357/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.118668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prr_2
id: 1prr_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prr_2/nostruct-align/1prr_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prr_2/nostruct-align/1prr_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prr_2/nostruct-align/1prr_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6921/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.660660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prr_1
id: 1prr_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prr_1/nostruct-align/1prr_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prr_1/nostruct-align/1prr_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prr_1/nostruct-align/1prr_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21641/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.789658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prhA_2
id: 1prhA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prhA_2/nostruct-align/1prhA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prhA_2/nostruct-align/1prhA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prhA_2/nostruct-align/1prhA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25632/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.739655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hc2_2
id: 1hc2_2   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hc2_2/nostruct-align/1hc2_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hc2_2/nostruct-align/1hc2_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hc2_2/nostruct-align/1hc2_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.159668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1udpA
id: 1udpA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1udpA/nostruct-align/1udpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1udpA/nostruct-align/1udpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1udpA/nostruct-align/1udpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30204/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.195663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlhA_1
id: 1dlhA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dlhA_1/nostruct-align/1dlhA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dlhA_1/nostruct-align/1dlhA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dlhA_1/nostruct-align/1dlhA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19071/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.186661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prhA_1
id: 1prhA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prhA_1/nostruct-align/1prhA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prhA_1/nostruct-align/1prhA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prhA_1/nostruct-align/1prhA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32089/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.807663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prc_1l1
id: 1prc_1l1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prc_1l1/nostruct-align/1prc_1l1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prc_1l1/nostruct-align/1prc_1l1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prc_1l1/nostruct-align/1prc_1l1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18304/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpgA_1
id: 1dpgA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dpgA_1/nostruct-align/1dpgA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dpgA_1/nostruct-align/1dpgA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dpgA_1/nostruct-align/1dpgA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6848/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.136658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prcH_1
id: 1prcH_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1prcH_1/nostruct-align/1prcH_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1prcH_1/nostruct-align/1prcH_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1prcH_1/nostruct-align/1prcH_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.879654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ubi
id: 1ubi   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ubi/nostruct-align/1ubi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24885/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.380661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hc2_1
id: 1hc2_1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hc2_1/nostruct-align/1hc2_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hc2_1/nostruct-align/1hc2_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hc2_1/nostruct-align/1hc2_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22076/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.074661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vtmP
id: 1vtmP   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vtmP/nostruct-align/1vtmP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.464661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 256bA
id: 256bA   alignment found: /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/25/256bA/nostruct-align/256bA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3614/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.389664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yrnA
id: 1yrnA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yrnA/nostruct-align/1yrnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14140/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.379669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xxaA
id: 1xxaA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xxaA/nostruct-align/1xxaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24721/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.802673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1znf
id: 1znf   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1znf/nostruct-align/1znf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30498/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -4.813660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wapA
id: 1wapA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wapA/nostruct-align/1wapA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2950/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.483673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wsyA
id: 1wsyA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wsyA/nostruct-align/1wsyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wsyA/nostruct-align/1wsyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wsyA/nostruct-align/1wsyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13825/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.592667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xnb
id: 1xnb   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xnb/nostruct-align/1xnb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19572/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.995651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xyzA
id: 1xyzA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xyzA/nostruct-align/1xyzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26847/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.202652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bbkL
id: 2bbkL   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bbkL/nostruct-align/2bbkL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14904/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.906662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yrnB
id: 1yrnB   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yrnB/nostruct-align/1yrnB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30760/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.845657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bbkH
id: 2bbkH   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bbkH/nostruct-align/2bbkH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6719/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.335663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wsyB
id: 1wsyB   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wsyB/nostruct-align/1wsyB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wsyB/nostruct-align/1wsyB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wsyB/nostruct-align/1wsyB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11875/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.703659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2aviA
id: 2aviA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2aviA/nostruct-align/2aviA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28716/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.765656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zaaC
id: 1zaaC   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zaaC/nostruct-align/1zaaC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16118/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.390656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpgA_2
id: 1dpgA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dpgA_2/nostruct-align/1dpgA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dpgA_2/nostruct-align/1dpgA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dpgA_2/nostruct-align/1dpgA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13146/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.947662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2alp
id: 2alp   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2alp/nostruct-align/2alp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19629/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.260666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2abk
id: 2abk   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2abk/nostruct-align/2abk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17377/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.934662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yptA
id: 1yptA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yptA/nostruct-align/1yptA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15781/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.627655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dprA_1
id: 1dprA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dprA_1/nostruct-align/1dprA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dprA_1/nostruct-align/1dprA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dprA_1/nostruct-align/1dprA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14428/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.994659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpr_1a1
id: 1dpr_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dpr_1a1/nostruct-align/1dpr_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dpr_1a1/nostruct-align/1dpr_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dpr_1a1/nostruct-align/1dpr_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29712/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.002655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ppi_2
id: 1ppi_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1ppi_2/nostruct-align/1ppi_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1ppi_2/nostruct-align/1ppi_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1ppi_2/nostruct-align/1ppi_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8083/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.591660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2baa
id: 2baa   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2baa/nostruct-align/2baa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27406/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.484665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dsbA_1
id: 1dsbA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dsbA_1/nostruct-align/1dsbA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dsbA_1/nostruct-align/1dsbA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dsbA_1/nostruct-align/1dsbA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32085/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.796661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ppi_1
id: 1ppi_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1ppi_1/nostruct-align/1ppi_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1ppi_1/nostruct-align/1ppi_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1ppi_1/nostruct-align/1ppi_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25145/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.226669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2act
id: 2act   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2act/nostruct-align/2act.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17274/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.444672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pkp_2
id: 1pkp_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pkp_2/nostruct-align/1pkp_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pkp_2/nostruct-align/1pkp_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pkp_2/nostruct-align/1pkp_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2588/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.517654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dsbA_2
id: 1dsbA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1d/1dsbA_2/nostruct-align/1dsbA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1d/1dsbA_2/nostruct-align/1dsbA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1d/1dsbA_2/nostruct-align/1dsbA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2611/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.629669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pkp_1
id: 1pkp_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pkp_1/nostruct-align/1pkp_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pkp_1/nostruct-align/1pkp_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pkp_1/nostruct-align/1pkp_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23546/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.263657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2anhA
id: 2anhA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2anhA/nostruct-align/2anhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.018661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xsoA
id: 1xsoA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xsoA/nostruct-align/1xsoA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3534/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.720673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pii_2
id: 1pii_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pii_2/nostruct-align/1pii_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pii_2/nostruct-align/1pii_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pii_2/nostruct-align/1pii_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8427/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.308670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bpa2
id: 2bpa2   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bpa2/nostruct-align/2bpa2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27070/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.810669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2at2A
id: 2at2A   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2at2A/nostruct-align/2at2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13513/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.894653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2crd
id: 2crd   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2crd/nostruct-align/2crd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8422/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.431656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ebhA_1
id: 1ebhA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1ebhA_1/nostruct-align/1ebhA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1ebhA_1/nostruct-align/1ebhA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1ebhA_1/nostruct-align/1ebhA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1506/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.343658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bgu
id: 2bgu   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bgu/nostruct-align/2bgu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4365/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.565659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cy3
id: 2cy3   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cy3/nostruct-align/2cy3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5803/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.398651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bpa1
id: 2bpa1   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bpa1/nostruct-align/2bpa1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21937/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.296661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2acr
id: 2acr   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2acr/nostruct-align/2acr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19754/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.600662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pii_1
id: 1pii_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pii_1/nostruct-align/1pii_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pii_1/nostruct-align/1pii_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pii_1/nostruct-align/1pii_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16103/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.703659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2chsA
id: 2chsA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2chsA/nostruct-align/2chsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30559/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.021667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bopA
id: 2bopA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bopA/nostruct-align/2bopA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.867661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cba
id: 2cba   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cba/nostruct-align/2cba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4252/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.350662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pgs_2
id: 1pgs_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pgs_2/nostruct-align/1pgs_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pgs_2/nostruct-align/1pgs_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pgs_2/nostruct-align/1pgs_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24551/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.656662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ebhA_2
id: 1ebhA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1ebhA_2/nostruct-align/1ebhA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1ebhA_2/nostruct-align/1ebhA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1ebhA_2/nostruct-align/1ebhA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23359/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.406662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ccyA
id: 2ccyA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2ccyA/nostruct-align/2ccyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.713669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pgs_1
id: 1pgs_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pgs_1/nostruct-align/1pgs_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pgs_1/nostruct-align/1pgs_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pgs_1/nostruct-align/1pgs_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16624/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.894669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pda_2
id: 1pda_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pda_2/nostruct-align/1pda_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pda_2/nostruct-align/1pda_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pda_2/nostruct-align/1pda_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9026/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.273666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fgf
id: 2fgf   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fgf/nostruct-align/2fgf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5067/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.688660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fxb
id: 2fxb   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fxb/nostruct-align/2fxb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fxb/nostruct-align/2fxb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fxb/nostruct-align/2fxb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15788/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.267670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bbvA
id: 2bbvA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bbvA/nostruct-align/2bbvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27956/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.510666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fx2
id: 2fx2   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fx2/nostruct-align/2fx2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31215/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.542664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pda_1
id: 1pda_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pda_1/nostruct-align/1pda_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pda_1/nostruct-align/1pda_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pda_1/nostruct-align/1pda_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23239/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.752655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2end
id: 2end   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2end/nostruct-align/2end.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13765/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.173660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbe_2
id: 1pbe_2   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pbe_2/nostruct-align/1pbe_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pbe_2/nostruct-align/1pbe_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pbe_2/nostruct-align/1pbe_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8096/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.510666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efgA_1
id: 1efgA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1efgA_1/nostruct-align/1efgA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1efgA_1/nostruct-align/1efgA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1efgA_1/nostruct-align/1efgA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19965/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.398666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bltA
id: 2bltA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bltA/nostruct-align/2bltA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27170/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.857651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dnjA
id: 2dnjA   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dnjA/nostruct-align/2dnjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10574/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.676666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hbt_1l1
id: 1hbt_1l1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hbt_1l1/nostruct-align/1hbt_1l1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hbt_1l1/nostruct-align/1hbt_1l1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hbt_1l1/nostruct-align/1hbt_1l1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3002/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.328659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dri
id: 2dri   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dri/nostruct-align/2dri.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24100/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.835663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbe_1
id: 1pbe_1   alignment found: /projects/compbio4/experiments/models.97/domains/1p/1pbe_1/nostruct-align/1pbe_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1p/1pbe_1/nostruct-align/1pbe_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1p/1pbe_1/nostruct-align/1pbe_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7154/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.984665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ctb
id: 2ctb   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2ctb/nostruct-align/2ctb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21255/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.659668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1han_2
id: 1han_2   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1han_2/nostruct-align/1han_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1han_2/nostruct-align/1han_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1han_2/nostruct-align/1han_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.843674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hhmA
id: 2hhmA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hhmA/nostruct-align/2hhmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-11641/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.697662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ordA_3
id: 1ordA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1ordA_3/nostruct-align/1ordA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1ordA_3/nostruct-align/1ordA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1ordA_3/nostruct-align/1ordA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18659/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.212662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1han_1
id: 1han_1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1han_1/nostruct-align/1han_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1han_1/nostruct-align/1han_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1han_1/nostruct-align/1han_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16036/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.385666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ebn
id: 2ebn   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ebn/nostruct-align/2ebn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7698/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.686661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ordA_2
id: 1ordA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1ordA_2/nostruct-align/1ordA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1ordA_2/nostruct-align/1ordA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1ordA_2/nostruct-align/1ordA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5565/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.253662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ordA_1
id: 1ordA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1ordA_1/nostruct-align/1ordA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1ordA_1/nostruct-align/1ordA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1ordA_1/nostruct-align/1ordA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8616/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.640671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ora_2
id: 1ora_2   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1ora_2/nostruct-align/1ora_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1ora_2/nostruct-align/1ora_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1ora_2/nostruct-align/1ora_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21101/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.360672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ora_1
id: 1ora_1   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1ora_1/nostruct-align/1ora_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1ora_1/nostruct-align/1ora_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1ora_1/nostruct-align/1ora_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27357/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.327667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1octC_2
id: 1octC_2   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1octC_2/nostruct-align/1octC_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1octC_2/nostruct-align/1octC_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1octC_2/nostruct-align/1octC_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gtrA_2
id: 1gtrA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gtrA_2/nostruct-align/1gtrA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gtrA_2/nostruct-align/1gtrA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gtrA_2/nostruct-align/1gtrA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21484/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.946655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1octC_1
id: 1octC_1   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1octC_1/nostruct-align/1octC_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1octC_1/nostruct-align/1octC_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1octC_1/nostruct-align/1octC_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.463654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dkb
id: 2dkb   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dkb/nostruct-align/2dkb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1834/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.893661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2kauA
id: 2kauA   alignment found: /projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2k/2kauA/nostruct-align/2kauA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21989/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.692657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2int
id: 2int   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2int/nostruct-align/2int.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28982/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.730667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cyp
id: 2cyp   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cyp/nostruct-align/2cyp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21228/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.327667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oacA_4
id: 1oacA_4   alignment found: /projects/compbio4/experiments/models.97/domains/1o/1oacA_4/nostruct-align/1oacA_4.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1o/1oacA_4/nostruct-align/1oacA_4.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1o/1oacA_4/nostruct-align/1oacA_4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5783/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.064667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hts
id: 2hts   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hts/nostruct-align/2hts.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.104675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gtrA_1
id: 1gtrA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gtrA_1/nostruct-align/1gtrA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gtrA_1/nostruct-align/1gtrA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gtrA_1/nostruct-align/1gtrA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16105/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.696671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ncfA_1
id: 1ncfA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1n/1ncfA_1/nostruct-align/1ncfA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1n/1ncfA_1/nostruct-align/1ncfA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1n/1ncfA_1/nostruct-align/1ncfA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29567/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.059662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ligA
id: 2ligA   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2ligA/nostruct-align/2ligA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7892/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.827652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mysA_2
id: 1mysA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mysA_2/nostruct-align/1mysA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mysA_2/nostruct-align/1mysA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mysA_2/nostruct-align/1mysA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19994/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.414658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2kauB
id: 2kauB   alignment found: /projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2k/2kauB/nostruct-align/2kauB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.110672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hipA
id: 2hipA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hipA/nostruct-align/2hipA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4116/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.941666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mysA_1
id: 1mysA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mysA_1/nostruct-align/1mysA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mysA_1/nostruct-align/1mysA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mysA_1/nostruct-align/1mysA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.818665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lbp
id: 2lbp   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lbp/nostruct-align/2lbp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4987/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.944656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hmqA
id: 2hmqA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hmqA/nostruct-align/2hmqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4742/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.585663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gseA_2
id: 1gseA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gseA_2/nostruct-align/1gseA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gseA_2/nostruct-align/1gseA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gseA_2/nostruct-align/1gseA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17621/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.469666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ifo
id: 2ifo   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2ifo/nostruct-align/2ifo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32090/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.961670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mseC_2
id: 1mseC_2   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mseC_2/nostruct-align/1mseC_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mseC_2/nostruct-align/1mseC_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mseC_2/nostruct-align/1mseC_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3293/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.484665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ila
id: 2ila   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2ila/nostruct-align/2ila.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1007/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.197662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mseC_1
id: 1mseC_1   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mseC_1/nostruct-align/1mseC_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mseC_1/nostruct-align/1mseC_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mseC_1/nostruct-align/1mseC_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21668/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.033661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mngA_2
id: 1mngA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mngA_2/nostruct-align/1mngA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mngA_2/nostruct-align/1mngA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mngA_2/nostruct-align/1mngA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29123/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.764664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gseA_1
id: 1gseA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gseA_1/nostruct-align/1gseA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gseA_1/nostruct-align/1gseA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gseA_1/nostruct-align/1gseA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20277/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.999664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mngA_1
id: 1mngA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mngA_1/nostruct-align/1mngA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mngA_1/nostruct-align/1mngA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mngA_1/nostruct-align/1mngA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13970/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.301666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mla_2
id: 1mla_2   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mla_2/nostruct-align/1mla_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mla_2/nostruct-align/1mla_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mla_2/nostruct-align/1mla_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1379/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.152664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mev1
id: 2mev1   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mev1/nostruct-align/2mev1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14619/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.293655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efgA_2
id: 1efgA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1efgA_2/nostruct-align/1efgA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1efgA_2/nostruct-align/1efgA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1efgA_2/nostruct-align/1efgA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1832/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.091660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cpl
id: 2cpl   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cpl/nostruct-align/2cpl.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6080/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.102661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1grl_3
id: 1grl_3   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1grl_3/nostruct-align/1grl_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1grl_3/nostruct-align/1grl_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1grl_3/nostruct-align/1grl_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2857/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.646667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efgA_3
id: 1efgA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1efgA_3/nostruct-align/1efgA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1efgA_3/nostruct-align/1efgA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1efgA_3/nostruct-align/1efgA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20995/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.386673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efgA_4
id: 1efgA_4   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1efgA_4/nostruct-align/1efgA_4.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1efgA_4/nostruct-align/1efgA_4.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1efgA_4/nostruct-align/1efgA_4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29344/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.048660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eft_1
id: 1eft_1   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1eft_1/nostruct-align/1eft_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1eft_1/nostruct-align/1eft_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1eft_1/nostruct-align/1eft_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12169/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.039658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mla_1
id: 1mla_1   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mla_1/nostruct-align/1mla_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mla_1/nostruct-align/1mla_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mla_1/nostruct-align/1mla_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26470/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.991669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hnp
id: 2hnp   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hnp/nostruct-align/2hnp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25074/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.493668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4cpaI
id: 4cpaI   alignment found: /projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4c/4cpaI/nostruct-align/4cpaI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.558670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4sgbI
id: 4sgbI   alignment found: /projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4s/4sgbI/nostruct-align/4sgbI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20521/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.078659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gesA_1
id: 1gesA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gesA_1/nostruct-align/1gesA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gesA_1/nostruct-align/1gesA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gesA_1/nostruct-align/1gesA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.947662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4icb
id: 4icb   alignment found: /projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4i/4icb/nostruct-align/4icb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8496/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.832657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eft_2
id: 1eft_2   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1eft_2/nostruct-align/1eft_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1eft_2/nostruct-align/1eft_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1eft_2/nostruct-align/1eft_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13466/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.513657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3sdhA
id: 3sdhA   alignment found: /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3s/3sdhA/nostruct-align/3sdhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14758/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.403671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3rubS
id: 3rubS   alignment found: /projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3r/3rubS/nostruct-align/3rubS.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30990/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.747665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4fxn
id: 4fxn   alignment found: /projects/compbio/experiments/models.97/pdb/4f/4fxn/nostruct-align/4fxn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4f/4fxn/nostruct-align/4fxn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4f/4fxn/nostruct-align/4fxn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20626/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.213669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 9rnt
id: 9rnt   alignment found: /projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/9r/9rnt/nostruct-align/9rnt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31867/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.301666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5cytR
id: 5cytR   alignment found: /projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5c/5cytR/nostruct-align/5cytR.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10859/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.987656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3tgl
id: 3tgl   alignment found: /projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3t/3tgl/nostruct-align/3tgl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5401/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.375656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8dfr
id: 8dfr   alignment found: /projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8d/8dfr/nostruct-align/8dfr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14801/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.221664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gdhA_2
id: 1gdhA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gdhA_2/nostruct-align/1gdhA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gdhA_2/nostruct-align/1gdhA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gdhA_2/nostruct-align/1gdhA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-51/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.893661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mhl_1a1
id: 1mhl_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1m/1mhl_1a1/nostruct-align/1mhl_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1m/1mhl_1a1/nostruct-align/1mhl_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1m/1mhl_1a1/nostruct-align/1mhl_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7510/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.973663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8rxnA
id: 8rxnA   alignment found: /projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8r/8rxnA/nostruct-align/8rxnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21765/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.901672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4mt2
id: 4mt2   alignment found: /projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4m/4mt2/nostruct-align/4mt2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28810/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.855667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3inkC
id: 3inkC   alignment found: /projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3i/3inkC/nostruct-align/3inkC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.438675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pgm
id: 3pgm   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pgm/nostruct-align/3pgm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21457/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.070663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gdhA_1
id: 1gdhA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gdhA_1/nostruct-align/1gdhA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gdhA_1/nostruct-align/1gdhA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gdhA_1/nostruct-align/1gdhA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32082/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.874664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pga1
id: 3pga1   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pga1/nostruct-align/3pga1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2577/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.333664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3bcl
id: 3bcl   alignment found: /projects/compbio/experiments/models.97/pdb/3b/3bcl/nostruct-align/3bcl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3b/3bcl/nostruct-align/3bcl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3b/3bcl/nostruct-align/3bcl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18714/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.753677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 351c
id: 351c   alignment found: /projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/35/351c/nostruct-align/351c.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16396/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.009659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4ptp
id: 4ptp   alignment found: /projects/compbio/experiments/models.97/pdb/4p/4ptp/nostruct-align/4ptp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4p/4ptp/nostruct-align/4ptp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4p/4ptp/nostruct-align/4ptp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15244/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.871674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ztaA
id: 2ztaA   alignment found: /projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2z/2ztaA/nostruct-align/2ztaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14124/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.253662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cla
id: 3cla   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3cla/nostruct-align/3cla.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31845/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.152664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5znf
id: 5znf   alignment found: /projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5z/5znf/nostruct-align/5znf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5699/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.303665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8abp
id: 8abp   alignment found: /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8a/8abp/nostruct-align/8abp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5394/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.343658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3b5c
id: 3b5c   alignment found: /projects/compbio/experiments/models.97/pdb/3b/3b5c/nostruct-align/3b5c.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3b/3b5c/nostruct-align/3b5c.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3b/3b5c/nostruct-align/3b5c.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28428/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.708664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3rp2A
id: 3rp2A   alignment found: /projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3r/3rp2A/nostruct-align/3rp2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11612/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.916672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1irk
id: 1irk   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1irk/nostruct-align/1irk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12935/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.436661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vsgA
id: 1vsgA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vsgA/nostruct-align/1vsgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23446/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.672668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3dfr
id: 3dfr   alignment found: /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3d/3dfr/nostruct-align/3dfr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22299/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.178650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gd1O_2
id: 1gd1O_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gd1O_2/nostruct-align/1gd1O_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gd1O_2/nostruct-align/1gd1O_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gd1O_2/nostruct-align/1gd1O_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9691/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.996658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lhb
id: 2lhb   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lhb/nostruct-align/2lhb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10828/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.394669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pdd
id: 2pdd   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pdd/nostruct-align/2pdd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-9413/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.454666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mtaC
id: 2mtaC   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mtaC/nostruct-align/2mtaC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14151/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pte
id: 3pte   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pte/nostruct-align/3pte.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-53/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.811661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lylA_2
id: 1lylA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lylA_2/nostruct-align/1lylA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lylA_2/nostruct-align/1lylA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lylA_2/nostruct-align/1lylA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20219/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7rsa
id: 7rsa   alignment found: /projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7r/7rsa/nostruct-align/7rsa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.831665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ptl
id: 2ptl   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2ptl/nostruct-align/2ptl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11335/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2wrpR
id: 2wrpR   alignment found: /projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2w/2wrpR/nostruct-align/2wrpR.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4138/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.712662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pna
id: 2pna   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pna/nostruct-align/2pna.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23490/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.159653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fbr_2
id: 1fbr_2   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fbr_2/nostruct-align/1fbr_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fbr_2/nostruct-align/1fbr_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fbr_2/nostruct-align/1fbr_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30095/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.704666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2prd
id: 2prd   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2prd/nostruct-align/2prd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25872/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.312668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cbh
id: 3cbh   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3cbh/nostruct-align/3cbh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8956/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.199661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lylA_1
id: 1lylA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lylA_1/nostruct-align/1lylA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lylA_1/nostruct-align/1lylA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lylA_1/nostruct-align/1lylA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11604/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.389664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ms2A
id: 2ms2A   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2ms2A/nostruct-align/2ms2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1988/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.605667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sicI
id: 2sicI   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sicI/nostruct-align/2sicI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4497/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.695663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pec
id: 2pec   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pec/nostruct-align/2pec.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27565/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.363663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fbr_1
id: 1fbr_1   alignment found: /projects/compbio4/experiments/models.97/domains/1f/1fbr_1/nostruct-align/1fbr_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1f/1fbr_1/nostruct-align/1fbr_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1f/1fbr_1/nostruct-align/1fbr_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18106/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.618668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tgf
id: 2tgf   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tgf/nostruct-align/2tgf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32704/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.864670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hmx
id: 2hmx   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hmx/nostruct-align/2hmx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29166/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.224670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rn2
id: 2rn2   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rn2/nostruct-align/2rn2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17523/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.397659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tbvA
id: 2tbvA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tbvA/nostruct-align/2tbvA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.290665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rslA
id: 2rslA   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rslA/nostruct-align/2rslA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13503/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.910660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lvl_3
id: 1lvl_3   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lvl_3/nostruct-align/1lvl_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lvl_3/nostruct-align/1lvl_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lvl_3/nostruct-align/1lvl_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29668/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.942657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2spcA
id: 2spcA   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2spcA/nostruct-align/2spcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13320/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.951675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ezm_2
id: 1ezm_2   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1ezm_2/nostruct-align/1ezm_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1ezm_2/nostruct-align/1ezm_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1ezm_2/nostruct-align/1ezm_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12981/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.014664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sn3
id: 2sn3   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sn3/nostruct-align/2sn3.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15309/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.642670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2snv
id: 2snv   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2snv/nostruct-align/2snv.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22497/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.065659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sas
id: 2sas   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sas/nostruct-align/2sas.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22261/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.267654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2por
id: 2por   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2por/nostruct-align/2por.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29556/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.293655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lvl_2
id: 1lvl_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lvl_2/nostruct-align/1lvl_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lvl_2/nostruct-align/1lvl_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lvl_2/nostruct-align/1lvl_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.472672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5p21
id: 5p21   alignment found: /projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5p/5p21/nostruct-align/5p21.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.245667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tct
id: 2tct   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tct/nostruct-align/2tct.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8855/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.247650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3aahA
id: 3aahA   alignment found: /projects/compbio/experiments/models.97/pdb/3a/3aahA/nostruct-align/3aahA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3a/3aahA/nostruct-align/3aahA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3a/3aahA/nostruct-align/3aahA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20571/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.399658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2trxA
id: 2trxA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2trxA/nostruct-align/2trxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13873/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.813660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ezm_1
id: 1ezm_1   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1ezm_1/nostruct-align/1ezm_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1ezm_1/nostruct-align/1ezm_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1ezm_1/nostruct-align/1ezm_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22114/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.070663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eft_3
id: 1eft_3   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1eft_3/nostruct-align/1eft_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1eft_3/nostruct-align/1eft_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1eft_3/nostruct-align/1eft_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26369/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.358658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2phy
id: 2phy   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2phy/nostruct-align/2phy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19650/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.982666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lvl_1
id: 1lvl_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lvl_1/nostruct-align/1lvl_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lvl_1/nostruct-align/1lvl_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lvl_1/nostruct-align/1lvl_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.933655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lts_1a1
id: 1lts_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lts_1a1/nostruct-align/1lts_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lts_1a1/nostruct-align/1lts_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lts_1a1/nostruct-align/1lts_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28555/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.445663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lpbA_2
id: 1lpbA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lpbA_2/nostruct-align/1lpbA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lpbA_2/nostruct-align/1lpbA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lpbA_2/nostruct-align/1lpbA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6990/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1esl_2
id: 1esl_2   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1esl_2/nostruct-align/1esl_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1esl_2/nostruct-align/1esl_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1esl_2/nostruct-align/1esl_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2770/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pcdA
id: 2pcdA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pcdA/nostruct-align/2pcdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19039/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.413651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pldA
id: 2pldA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pldA/nostruct-align/2pldA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18929/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.205673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lpbA_1
id: 1lpbA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lpbA_1/nostruct-align/1lpbA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lpbA_1/nostruct-align/1lpbA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lpbA_1/nostruct-align/1lpbA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24158/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.882675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3nn9
id: 3nn9   alignment found: /projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3n/3nn9/nostruct-align/3nn9.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-18828/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.232666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5fbpA
id: 5fbpA   alignment found: /projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5f/5fbpA/nostruct-align/5fbpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.244659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pcdM
id: 2pcdM   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pcdM/nostruct-align/2pcdM.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9678/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.567657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lldA_2
id: 1lldA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lldA_2/nostruct-align/1lldA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lldA_2/nostruct-align/1lldA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lldA_2/nostruct-align/1lldA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2934/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.717667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1esl_1
id: 1esl_1   alignment found: /projects/compbio4/experiments/models.97/domains/1e/1esl_1/nostruct-align/1esl_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1e/1esl_1/nostruct-align/1esl_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1e/1esl_1/nostruct-align/1esl_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20284/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.688660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2stv
id: 2stv   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2stv/nostruct-align/2stv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30865/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.426651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2scpA
id: 2scpA   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2scpA/nostruct-align/2scpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3874/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.131668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sil
id: 2sil   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sil/nostruct-align/2sil.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9094/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.986664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lldA_1
id: 1lldA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lldA_1/nostruct-align/1lldA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lldA_1/nostruct-align/1lldA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lldA_1/nostruct-align/1lldA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19969/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.801666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3chy
id: 3chy   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3chy/nostruct-align/3chy.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13587/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.024658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gesA_2
id: 1gesA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gesA_2/nostruct-align/1gesA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gesA_2/nostruct-align/1gesA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gesA_2/nostruct-align/1gesA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-223/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -13.171661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rspA
id: 2rspA   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rspA/nostruct-align/2rspA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21048/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.705673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lla_2
id: 1lla_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lla_2/nostruct-align/1lla_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lla_2/nostruct-align/1lla_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lla_2/nostruct-align/1lla_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4136/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.261658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gesA_3
id: 1gesA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gesA_3/nostruct-align/1gesA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gesA_3/nostruct-align/1gesA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gesA_3/nostruct-align/1gesA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12863/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.853653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2omf
id: 2omf   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2omf/nostruct-align/2omf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18019/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.010666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ggtA_1
id: 1ggtA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1ggtA_1/nostruct-align/1ggtA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1ggtA_1/nostruct-align/1ggtA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1ggtA_1/nostruct-align/1ggtA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2092/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.861664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2xis
id: 2xis   alignment found: /projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2x/2xis/nostruct-align/2xis.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22262/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.200668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ggtA_2
id: 1ggtA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1ggtA_2/nostruct-align/1ggtA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1ggtA_2/nostruct-align/1ggtA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1ggtA_2/nostruct-align/1ggtA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19290/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.836655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ggtA_3
id: 1ggtA_3   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1ggtA_3/nostruct-align/1ggtA_3.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1ggtA_3/nostruct-align/1ggtA_3.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1ggtA_3/nostruct-align/1ggtA_3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.007660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bmhA
id: 2bmhA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bmhA/nostruct-align/2bmhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22470/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.435654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3dpvA
id: 3dpvA   alignment found: /projects/compbio/experiments/models.97/pdb/3d/3dpvA/nostruct-align/3dpvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3d/3dpvA/nostruct-align/3dpvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3d/3dpvA/nostruct-align/3dpvA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10656/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.212662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lla_1
id: 1lla_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lla_1/nostruct-align/1lla_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lla_1/nostruct-align/1lla_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lla_1/nostruct-align/1lla_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.808670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2olbA
id: 2olbA   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2olbA/nostruct-align/2olbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.815659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ggtA_4
id: 1ggtA_4   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1ggtA_4/nostruct-align/1ggtA_4.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1ggtA_4/nostruct-align/1ggtA_4.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1ggtA_4/nostruct-align/1ggtA_4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15564/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.483658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ldm_2
id: 1ldm_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1ldm_2/nostruct-align/1ldm_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1ldm_2/nostruct-align/1ldm_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1ldm_2/nostruct-align/1ldm_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25578/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.974670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ldm_1
id: 1ldm_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1ldm_1/nostruct-align/1ldm_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1ldm_1/nostruct-align/1ldm_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1ldm_1/nostruct-align/1ldm_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26773/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.365662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1glaG_1
id: 1glaG_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1glaG_1/nostruct-align/1glaG_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1glaG_1/nostruct-align/1glaG_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1glaG_1/nostruct-align/1glaG_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32256/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.097656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ldb_2
id: 1ldb_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1ldb_2/nostruct-align/1ldb_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1ldb_2/nostruct-align/1ldb_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1ldb_2/nostruct-align/1ldb_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.498657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2phlA
id: 2phlA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2phlA/nostruct-align/2phlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.035660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1glaG_2
id: 1glaG_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1glaG_2/nostruct-align/1glaG_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1glaG_2/nostruct-align/1glaG_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1glaG_2/nostruct-align/1glaG_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14260/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.655670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7icd
id: 7icd   alignment found: /projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7i/7icd/nostruct-align/7icd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9704/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.919662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ldb_1
id: 1ldb_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1ldb_1/nostruct-align/1ldb_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1ldb_1/nostruct-align/1ldb_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1ldb_1/nostruct-align/1ldb_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gln_1
id: 1gln_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gln_1/nostruct-align/1gln_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gln_1/nostruct-align/1gln_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gln_1/nostruct-align/1gln_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-364/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.780655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gln_2
id: 1gln_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gln_2/nostruct-align/1gln_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gln_2/nostruct-align/1gln_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gln_2/nostruct-align/1gln_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25511/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.820663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lam_2
id: 1lam_2   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lam_2/nostruct-align/1lam_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lam_2/nostruct-align/1lam_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lam_2/nostruct-align/1lam_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30956/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.202667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mev2
id: 2mev2   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mev2/nostruct-align/2mev2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6233/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.947662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lam_1
id: 1lam_1   alignment found: /projects/compbio4/experiments/models.97/domains/1l/1lam_1/nostruct-align/1lam_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1l/1lam_1/nostruct-align/1lam_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1l/1lam_1/nostruct-align/1lam_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19374/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.794662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1glqA_1
id: 1glqA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1glqA_1/nostruct-align/1glqA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1glqA_1/nostruct-align/1glqA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1glqA_1/nostruct-align/1glqA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11796/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1glqA_2
id: 1glqA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1glqA_2/nostruct-align/1glqA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1glqA_2/nostruct-align/1glqA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1glqA_2/nostruct-align/1glqA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27608/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.842651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gof_1
id: 1gof_1   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gof_1/nostruct-align/1gof_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gof_1/nostruct-align/1gof_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gof_1/nostruct-align/1gof_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-440/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.521667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gof_2
id: 1gof_2   alignment found: /projects/compbio4/experiments/models.97/domains/1g/1gof_2/nostruct-align/1gof_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1g/1gof_2/nostruct-align/1gof_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1g/1gof_2/nostruct-align/1gof_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18859/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.391663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kfd_2
id: 1kfd_2   alignment found: /projects/compbio4/experiments/models.97/domains/1k/1kfd_2/nostruct-align/1kfd_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1k/1kfd_2/nostruct-align/1kfd_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1k/1kfd_2/nostruct-align/1kfd_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10511/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.911667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1thg
id: 1thg   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1thg/nostruct-align/1thg.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-527/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.183655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kfd_1
id: 1kfd_1   alignment found: /projects/compbio4/experiments/models.97/domains/1k/1kfd_1/nostruct-align/1kfd_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1k/1kfd_1/nostruct-align/1kfd_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1k/1kfd_1/nostruct-align/1kfd_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4144/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.344666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hpm_2
id: 1hpm_2   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hpm_2/nostruct-align/1hpm_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hpm_2/nostruct-align/1hpm_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hpm_2/nostruct-align/1hpm_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26980/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.482666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kapP_2
id: 1kapP_2   alignment found: /projects/compbio4/experiments/models.97/domains/1k/1kapP_2/nostruct-align/1kapP_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1k/1kapP_2/nostruct-align/1kapP_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1k/1kapP_2/nostruct-align/1kapP_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30532/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.689651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vfbA
id: 1vfbA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vfbA/nostruct-align/1vfbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31632/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.608658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kapP_1
id: 1kapP_1   alignment found: /projects/compbio4/experiments/models.97/domains/1k/1kapP_1/nostruct-align/1kapP_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1k/1kapP_1/nostruct-align/1kapP_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1k/1kapP_1/nostruct-align/1kapP_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14024/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.586655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1htr_1p1
id: 1htr_1p1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1htr_1p1/nostruct-align/1htr_1p1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1htr_1p1/nostruct-align/1htr_1p1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1htr_1p1/nostruct-align/1htr_1p1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19787/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.778656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ice_1a1
id: 1ice_1a1   alignment found: /projects/compbio4/experiments/models.97/domains/1i/1ice_1a1/nostruct-align/1ice_1a1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1i/1ice_1a1/nostruct-align/1ice_1a1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1i/1ice_1a1/nostruct-align/1ice_1a1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.487656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hyhA_1
id: 1hyhA_1   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hyhA_1/nostruct-align/1hyhA_1.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hyhA_1/nostruct-align/1hyhA_1.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hyhA_1/nostruct-align/1hyhA_1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.964661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hyhA_2
id: 1hyhA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1h/1hyhA_2/nostruct-align/1hyhA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1h/1hyhA_2/nostruct-align/1hyhA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1h/1hyhA_2/nostruct-align/1hyhA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6857/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.662659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aorA_2
id: 1aorA_2   alignment found: /projects/compbio4/experiments/models.97/domains/1a/1aorA_2/nostruct-align/1aorA_2.t99.a2m.gz
Reading parameter file /projects/compbio4/experiments/models.97/domains/1a/1aorA_2/nostruct-align/1aorA_2.t99-w0.5.mod
/projects/compbio4/experiments/models.97/domains/1a/1aorA_2/nostruct-align/1aorA_2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1404/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.562668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgeB
id: 1bgeB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgeB/nostruct-align/1bgeB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-26492/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.625671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c2rA
id: 1c2rA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c2rA/nostruct-align/1c2rA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19741/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.296661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cid
id: 1cid   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cid/nostruct-align/1cid.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2756/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.921661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cpcL
id: 1cpcL   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cpcL/nostruct-align/1cpcL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4695/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.185654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cauA
id: 1cauA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cauA/nostruct-align/1cauA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25294/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.000656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dbs
id: 1dbs   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dbs/nostruct-align/1dbs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31665/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.998672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dih
id: 1dih   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dih/nostruct-align/1dih.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13194/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.847672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dsbA
id: 1dsbA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dsbA/nostruct-align/1dsbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26379/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.966660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cauB
id: 1cauB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cauB/nostruct-align/1cauB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23282/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.554672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dxtB
id: 1dxtB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dxtB/nostruct-align/1dxtB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4649/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.363663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chrA
id: 1chrA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1chrA/nostruct-align/1chrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28523/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.200653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bfg
id: 1bfg   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bfg/nostruct-align/1bfg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19568/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.675659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bebA
id: 1bebA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bebA/nostruct-align/1bebA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.339661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aac
id: 1aac   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aac/nostruct-align/1aac.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7660/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.583664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amm
id: 1amm   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amm/nostruct-align/1amm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25095/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.461670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cpq
id: 1cpq   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cpq/nostruct-align/1cpq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11481/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.685654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmdA
id: 1bmdA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmdA/nostruct-align/1bmdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32087/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.216660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cyj
id: 1cyj   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cyj/nostruct-align/1cyj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16031/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.949661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cvl
id: 1cvl   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cvl/nostruct-align/1cvl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29581/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.515656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aa8A
id: 1aa8A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aa8A/nostruct-align/1aa8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26608/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.073654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1din
id: 1din   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1din/nostruct-align/1din.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-151/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.398666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dat
id: 1dat   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dat/nostruct-align/1dat.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19869/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.047668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1drw
id: 1drw   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1drw/nostruct-align/1drw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8323/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.892654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dxy
id: 1dxy   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dxy/nostruct-align/1dxy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13636/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.797653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1epaA
id: 1epaA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1epaA/nostruct-align/1epaA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11074/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.549667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctn
id: 1ctn   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ctn/nostruct-align/1ctn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16543/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.562668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cd8
id: 1cd8   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cd8/nostruct-align/1cd8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20838/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.858658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1broA
id: 1broA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1broA/nostruct-align/1broA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5845/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.602661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1frpA
id: 1frpA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1frpA/nostruct-align/1frpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22803/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.962662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cydA
id: 1cydA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cydA/nostruct-align/1cydA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.476669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eceA
id: 1eceA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eceA/nostruct-align/1eceA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9969/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.527664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfb
id: 1cfb   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cfb/nostruct-align/1cfb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31449/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.722656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdy
id: 1cdy   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdy/nostruct-align/1cdy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17303/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.139664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1grx
id: 1grx   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1grx/nostruct-align/1grx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23762/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.544662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efm
id: 1efm   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efm/nostruct-align/1efm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12101/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.522675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hbq
id: 1hbq   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hbq/nostruct-align/1hbq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.452652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gnd
id: 1gnd   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gnd/nostruct-align/1gnd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17375/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.029663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bjmA
id: 1bjmA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bjmA/nostruct-align/1bjmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8694/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.033661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bec
id: 1bec   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bec/nostruct-align/1bec.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6168/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.259674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fc1A
id: 1fc1A   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fc1A/nostruct-align/1fc1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.077667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1imbA
id: 1imbA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1imbA/nostruct-align/1imbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17342/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.589676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hnf
id: 1hnf   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hnf/nostruct-align/1hnf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12961/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.215668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1glcG
id: 1glcG   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1glcG/nostruct-align/1glcG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18180/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.657669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kinA
id: 1kinA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kinA/nostruct-align/1kinA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kinA/nostruct-align/1kinA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kinA/nostruct-align/1kinA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7770/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.467651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kte
id: 1kte   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kte/nostruct-align/1kte.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32288/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.606659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gdhA
id: 1gdhA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gdhA/nostruct-align/1gdhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25327/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.915665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hyhA
id: 1hyhA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hyhA/nostruct-align/1hyhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26002/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.901657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lehA
id: 1lehA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lehA/nostruct-align/1lehA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32111/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.183655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1enp
id: 1enp   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1enp/nostruct-align/1enp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13239/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.257660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gypA
id: 1gypA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gypA/nostruct-align/1gypA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21552/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.604660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gal
id: 1gal   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gal/nostruct-align/1gal.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8565/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.683655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hrdA
id: 1hrdA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hrdA/nostruct-align/1hrdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32199/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.966660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mtyB
id: 1mtyB   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mtyB/nostruct-align/1mtyB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15294/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mucA
id: 1mucA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mucA/nostruct-align/1mucA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32106/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.117676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1neu
id: 1neu   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1neu/nostruct-align/1neu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27845/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.987671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nfa
id: 1nfa   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nfa/nostruct-align/1nfa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6053/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.372665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cnv
id: 1cnv   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cnv/nostruct-align/1cnv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28601/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.325668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kay
id: 1kay   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kay/nostruct-align/1kay.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24139/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.066666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1forL
id: 1forL   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1forL/nostruct-align/1forL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14054/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.125656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mhyD
id: 1mhyD   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mhyD/nostruct-align/1mhyD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32243/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.614670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ieaA
id: 1ieaA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ieaA/nostruct-align/1ieaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-728/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.089661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nfkA
id: 1nfkA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nfkA/nostruct-align/1nfkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3452/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.568665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hilB
id: 1hilB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hilB/nostruct-align/1hilB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11153/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.015656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prs
id: 1prs   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prs/nostruct-align/1prs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pmi
id: 1pmi   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pmi/nostruct-align/1pmi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15036/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.639664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1octC
id: 1octC   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1octC/nostruct-align/1octC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16179/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.097656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pot
id: 1pot   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pot/nostruct-align/1pot.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1647/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.976654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pov1
id: 1pov1   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pov1/nostruct-align/1pov1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12357/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.743668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1omp
id: 1omp   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1omp/nostruct-align/1omp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1881/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.604660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rcy
id: 1rcy   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rcy/nostruct-align/1rcy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31459/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.843674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1psdA
id: 1psdA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1psdA/nostruct-align/1psdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11013/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.010666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mlcB
id: 1mlcB   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mlcB/nostruct-align/1mlcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21932/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.020660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1svpA
id: 1svpA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1svpA/nostruct-align/1svpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20450/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.192673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ryt
id: 1ryt   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ryt/nostruct-align/1ryt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22648/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.063660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ptvA
id: 1ptvA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ptvA/nostruct-align/1ptvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-613/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.016663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mfa
id: 1mfa   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mfa/nostruct-align/1mfa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24719/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.068665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tit
id: 1tit   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tit/nostruct-align/1tit.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28488/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.401657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1thx
id: 1thx   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1thx/nostruct-align/1thx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1152/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.905670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbe
id: 1pbe   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pbe/nostruct-align/1pbe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23153/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -13.140671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nhp
id: 1nhp   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nhp/nostruct-align/1nhp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25858/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.533661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vhrA
id: 1vhrA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vhrA/nostruct-align/1vhrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3246/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.992676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wit
id: 1wit   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wit/nostruct-align/1wit.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31207/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.557663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xel
id: 1xel   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xel/nostruct-align/1xel.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25686/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.212677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vcaA
id: 1vcaA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vcaA/nostruct-align/1vcaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3563/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.364655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qorA
id: 1qorA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qorA/nostruct-align/1qorA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27524/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.190659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbgA
id: 1pbgA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pbgA/nostruct-align/1pbgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-13005/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.821655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yasA
id: 1yasA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yasA/nostruct-align/1yasA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30880/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.643661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2azaA
id: 2azaA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2azaA/nostruct-align/2azaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3577/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.876663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ycc
id: 1ycc   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ycc/nostruct-align/1ycc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9244/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.954666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1trb
id: 1trb   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1trb/nostruct-align/1trb.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7104/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.215668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ytw
id: 1ytw   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ytw/nostruct-align/1ytw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26194/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.836655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zin
id: 1zin   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zin/nostruct-align/1zin.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31675/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.350677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bb2
id: 2bb2   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bb2/nostruct-align/2bb2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28195/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.417664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2i1b
id: 2i1b   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2i1b/nostruct-align/2i1b.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-729/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.949661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cmd
id: 2cmd   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cmd/nostruct-align/2cmd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27004/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.740662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gdm
id: 2gdm   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gdm/nostruct-align/2gdm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17312/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.477676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2btfA
id: 2btfA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2btfA/nostruct-align/2btfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29181/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.804657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hbg
id: 2hbg   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hbg/nostruct-align/2hbg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3618/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.480667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2myr
id: 2myr   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2myr/nostruct-align/2myr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2myr/nostruct-align/2myr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2myr/nostruct-align/2myr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.720657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mnr
id: 2mnr   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mnr/nostruct-align/2mnr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12218/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.187668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pgd
id: 2pgd   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pgd/nostruct-align/2pgd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-548/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.789658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fds
id: 1fds   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fds/nostruct-align/1fds.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.938660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sga
id: 2sga   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sga/nostruct-align/2sga.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23206/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.341660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1try
id: 1try   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1try/nostruct-align/1try.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16441/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.916672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2aaa
id: 2aaa   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2aaa/nostruct-align/2aaa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16081/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.706665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3hhrB
id: 3hhrB   alignment found: /projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3h/3hhrB/nostruct-align/3hhrB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27875/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.455658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4gcr
id: 4gcr   alignment found: /projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4g/4gcr/nostruct-align/4gcr.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20294/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.364670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fcdA
id: 1fcdA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fcdA/nostruct-align/1fcdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10836/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.231659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aozA
id: 1aozA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aozA/nostruct-align/1aozA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12490/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.452667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4enl
id: 4enl   alignment found: /projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4e/4enl/nostruct-align/4enl.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3465/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.608673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ohxA
id: 2ohxA   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2ohxA/nostruct-align/2ohxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20147/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.270660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cox
id: 3cox   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3cox/nostruct-align/3cox.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3805/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.082657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ladA
id: 3ladA   alignment found: /projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3l/3ladA/nostruct-align/3ladA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27873/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.902664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3grs
id: 3grs   alignment found: /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3g/3grs/nostruct-align/3grs.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27030/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.579666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ospL
id: 1ospL   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ospL/nostruct-align/1ospL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14810/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.131668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mlbA
id: 1mlbA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mlbA/nostruct-align/1mlbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11050/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.051666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tcrA
id: 1tcrA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tcrA/nostruct-align/1tcrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31205/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.088654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tetL
id: 1tetL   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tetL/nostruct-align/1tetL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5430/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.113663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ospH
id: 1ospH   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ospH/nostruct-align/1ospH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30444/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.059662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tmdA
id: 2tmdA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tmdA/nostruct-align/2tmdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29306/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.009674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8fabB
id: 8fabB   alignment found: /projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8f/8fabB/nostruct-align/8fabB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23390/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.031662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rthA
id: 1rthA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rthA/nostruct-align/1rthA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8211/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.914673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpl
id: 1gpl   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gpl/nostruct-align/1gpl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.945663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kveA
id: 1kveA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kveA/nostruct-align/1kveA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21077/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.194672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3chbD
id: 3chbD   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3chbD/nostruct-align/3chbD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19815/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.380661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ebx
id: 3ebx   alignment found: /projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3e/3ebx/nostruct-align/3ebx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6852/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.041656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kveB
id: 1kveB   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kveB/nostruct-align/1kveB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.274658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2erl
id: 2erl   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2erl/nostruct-align/2erl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29390/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.928665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kuh
id: 1kuh   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kuh/nostruct-align/1kuh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2993/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.735657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bteA
id: 1bteA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bteA/nostruct-align/1bteA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3219/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.985672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c52
id: 1c52   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c52/nostruct-align/1c52.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30475/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.604660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2utgA
id: 2utgA   alignment found: /projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2u/2utgA/nostruct-align/2utgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27378/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.097672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1burS
id: 1burS   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1burS/nostruct-align/1burS.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1burS/nostruct-align/1burS.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1burS/nostruct-align/1burS.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8745/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.723663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ilk
id: 2ilk   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2ilk/nostruct-align/2ilk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32619/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.130661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1htrP
id: 1htrP   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1htrP/nostruct-align/1htrP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23664/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.642670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rb9
id: 1rb9   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rb9/nostruct-align/1rb9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14624/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.945663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uroA
id: 1uroA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uroA/nostruct-align/1uroA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9632/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.959671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5icb
id: 5icb   alignment found: /projects/compbio/experiments/models.97/pdb/5i/5icb/nostruct-align/5icb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5i/5icb/nostruct-align/5icb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5i/5icb/nostruct-align/5icb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21580/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.694656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ixh
id: 1ixh   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ixh/nostruct-align/1ixh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30536/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.915665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pgtA
id: 1pgtA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pgtA/nostruct-align/1pgtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3200/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.627655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1thv
id: 1thv   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1thv/nostruct-align/1thv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25201/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.187668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6cel
id: 6cel   alignment found: /projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6c/6cel/nostruct-align/6cel.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4068/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.208664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dxgA
id: 1dxgA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dxgA/nostruct-align/1dxgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20488/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.182663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bk7A
id: 1bk7A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bk7A/nostruct-align/1bk7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20149/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.850662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pvb
id: 2pvb   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pvb/nostruct-align/2pvb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pvb/nostruct-align/2pvb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pvb/nostruct-align/2pvb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22317/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.292664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amf
id: 1amf   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amf/nostruct-align/1amf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28983/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.609665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wfbA
id: 1wfbA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wfbA/nostruct-align/1wfbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17452/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.065659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gci
id: 1gci   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gci/nostruct-align/1gci.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3956/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.882675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lam
id: 1lam   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lam/nostruct-align/1lam.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11838/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.028671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a4iA
id: 1a4iA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a4iA/nostruct-align/1a4iA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.996658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1orc
id: 1orc   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1orc/nostruct-align/1orc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16023/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.785660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pth
id: 2pth   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pth/nostruct-align/2pth.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27739/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.202652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nkd
id: 1nkd   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nkd/nostruct-align/1nkd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20233/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.045670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nlr
id: 1nlr   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nlr/nostruct-align/1nlr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14065/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.613663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a7s
id: 1a7s   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a7s/nostruct-align/1a7s.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7438/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.928665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tpsA
id: 2tpsA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tpsA/nostruct-align/2tpsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-420/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.240662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1edmB
id: 1edmB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1edmB/nostruct-align/1edmB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25029/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.444656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tph1
id: 1tph1   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tph1/nostruct-align/1tph1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18848/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.513657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1koe
id: 1koe   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1koe/nostruct-align/1koe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2432/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.307663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3lzt
id: 3lzt   alignment found: /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3l/3lzt/nostruct-align/3lzt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23912/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.609650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cjwA
id: 1cjwA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cjwA/nostruct-align/1cjwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30336/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.202652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tyv
id: 1tyv   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tyv/nostruct-align/1tyv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22469/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.465668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sbwI
id: 1sbwI   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sbwI/nostruct-align/1sbwI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sbwI/nostruct-align/1sbwI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sbwI/nostruct-align/1sbwI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14995/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -4.164658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bd8
id: 1bd8   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bd8/nostruct-align/1bd8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15482/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.720657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bs9
id: 1bs9   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bs9/nostruct-align/1bs9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17640/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.121658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8oA
id: 1b8oA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8oA/nostruct-align/1b8oA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22792/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.580673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2msbA
id: 2msbA   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2msbA/nostruct-align/2msbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16542/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.572662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b5eA
id: 1b5eA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b5eA/nostruct-align/1b5eA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4160/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.978668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dcs
id: 1dcs   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dcs/nostruct-align/1dcs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6378/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.953674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1anf
id: 1anf   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1anf/nostruct-align/1anf.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22430/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.708649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 9wgaA
id: 9wgaA   alignment found: /projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/9w/9wgaA/nostruct-align/9wgaA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22801/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.345673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fehA
id: 1fehA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fehA/nostruct-align/1fehA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20244/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.496658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qnf
id: 1qnf   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qnf/nostruct-align/1qnf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8611/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.286667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1awd
id: 1awd   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1awd/nostruct-align/1awd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17074/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.257660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2eng
id: 2eng   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2eng/nostruct-align/2eng.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3479/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.221664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jhgA
id: 1jhgA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jhgA/nostruct-align/1jhgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5117/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.715668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cyr
id: 3cyr   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3cyr/nostruct-align/3cyr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9386/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.190674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a68
id: 1a68   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a68/nostruct-align/1a68.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.043671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lcl
id: 1lcl   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lcl/nostruct-align/1lcl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5396/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.220673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lkkA
id: 1lkkA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lkkA/nostruct-align/1lkkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22507/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.115662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4tsvA
id: 4tsvA   alignment found: /projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4t/4tsvA/nostruct-align/4tsvA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7438/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.160660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nls
id: 1nls   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nls/nostruct-align/1nls.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13945/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.080673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b5fB
id: 1b5fB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b5fB/nostruct-align/1b5fB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4179/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.437668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tag
id: 1tag   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tag/nostruct-align/1tag.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29266/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.970657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b5fA
id: 1b5fA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b5fA/nostruct-align/1b5fA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4322/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.280655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nacA
id: 2nacA   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2nacA/nostruct-align/2nacA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9209/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.459671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ceqA
id: 1ceqA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceqA/nostruct-align/1ceqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4193/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.021667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uae
id: 1uae   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uae/nostruct-align/1uae.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9861/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.065659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a12A
id: 1a12A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a12A/nostruct-align/1a12A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15380/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.125656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pidB
id: 1pidB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pidB/nostruct-align/1pidB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18724/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.246658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pidA
id: 1pidA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pidA/nostruct-align/1pidA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16968/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -4.753677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3vub
id: 3vub   alignment found: /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3v/3vub/nostruct-align/3vub.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11967/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.578659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a2pA
id: 1a2pA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a2pA/nostruct-align/1a2pA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6792/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.786667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kpeA
id: 1kpeA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kpeA/nostruct-align/1kpeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1442/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.018661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rzl
id: 1rzl   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rzl/nostruct-align/1rzl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14102/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.561661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vqb
id: 1vqb   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vqb/nostruct-align/1vqb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.818665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2acy
id: 2acy   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2acy/nostruct-align/2acy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16215/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.438660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1msi
id: 1msi   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1msi/nostruct-align/1msi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22660/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.981674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ttbA
id: 1ttbA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1ttbA/nostruct-align/1ttbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2730/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1unkA
id: 1unkA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1unkA/nostruct-align/1unkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1880/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.981659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkjA
id: 1bkjA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkjA/nostruct-align/1bkjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.907669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6gsvA
id: 6gsvA   alignment found: /projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6g/6gsvA/nostruct-align/6gsvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24489/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.906662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pdo
id: 1pdo   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pdo/nostruct-align/1pdo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7308/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.469666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kid
id: 1kid   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kid/nostruct-align/1kid.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3975/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.825668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kp6A
id: 1kp6A   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kp6A/nostruct-align/1kp6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26518/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.115662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8d
id: 1a8d   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8d/nostruct-align/1a8d.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20084/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.725677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aqb
id: 1aqb   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aqb/nostruct-align/1aqb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4788/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.657654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8e
id: 1a8e   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8e/nostruct-align/1a8e.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28623/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.975662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avwB
id: 1avwB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avwB/nostruct-align/1avwB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21339/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.895660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1afwA
id: 1afwA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1afwA/nostruct-align/1afwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24269/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.104660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1moq
id: 1moq   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1moq/nostruct-align/1moq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-405/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1atzA
id: 1atzA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1atzA/nostruct-align/1atzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1233/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.132660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sluA
id: 1sluA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sluA/nostruct-align/1sluA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21068/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.219650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gcmA
id: 1gcmA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gcmA/nostruct-align/1gcmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20877/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.248672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ahtL
id: 1ahtL   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ahtL/nostruct-align/1ahtL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6916/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.062668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2a0b
id: 2a0b   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2a0b/nostruct-align/2a0b.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30078/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.402649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tgi
id: 2tgi   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tgi/nostruct-align/2tgi.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.255661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1msk
id: 1msk   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1msk/nostruct-align/1msk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31231/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.237656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bm8
id: 1bm8   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bm8/nostruct-align/1bm8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23756/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.145676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4fiv
id: 4fiv   alignment found: /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4f/4fiv/nostruct-align/4fiv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1002/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.335663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a7w
id: 1a7w   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a7w/nostruct-align/1a7w.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2197/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.736664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vfyA
id: 1vfyA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vfyA/nostruct-align/1vfyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-371/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.021652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ako
id: 1ako   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ako/nostruct-align/1ako.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25977/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.622665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ctc
id: 2ctc   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2ctc/nostruct-align/2ctc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12521/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.659668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bu7A
id: 1bu7A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bu7A/nostruct-align/1bu7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25461/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.474670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cuaA
id: 2cuaA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cuaA/nostruct-align/2cuaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25018/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.834656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgwA
id: 1qgwA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgwA/nostruct-align/1qgwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15149/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.759659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ezmA
id: 3ezmA   alignment found: /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3e/3ezmA/nostruct-align/3ezmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9608/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.052658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hlcA
id: 2hlcA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hlcA/nostruct-align/2hlcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25062/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.123657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3nul
id: 3nul   alignment found: /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3n/3nul/nostruct-align/3nul.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9522/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.174652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vie
id: 1vie   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vie/nostruct-align/1vie.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29777/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.014664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgwC
id: 1qgwC   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgwC/nostruct-align/1qgwC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25233/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.191666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nwpA
id: 1nwpA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nwpA/nostruct-align/1nwpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25515/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.825668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wab
id: 1wab   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wab/nostruct-align/1wab.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20527/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.159668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3aA
id: 1a3aA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3aA/nostruct-align/1a3aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23350/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.991653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mugA
id: 1mugA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mugA/nostruct-align/1mugA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18987/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.093658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aohA
id: 1aohA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aohA/nostruct-align/1aohA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10698/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.949661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1psrA
id: 1psrA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1psrA/nostruct-align/1psrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4888/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ltm
id: 1ltm   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ltm/nostruct-align/1ltm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.045670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bg6
id: 1bg6   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bg6/nostruct-align/1bg6.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17607/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.692673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qq4A
id: 1qq4A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qq4A/nostruct-align/1qq4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23288/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.289673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pda
id: 1pda   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pda/nostruct-align/1pda.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6906/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.179657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rhs
id: 1rhs   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rhs/nostruct-align/1rhs.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6628/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.819672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5ptp
id: 5ptp   alignment found: /projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5p/5ptp/nostruct-align/5ptp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11800/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.893661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nzyA
id: 1nzyA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nzyA/nostruct-align/1nzyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24335/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.494659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2qwc
id: 2qwc   alignment found: /projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2q/2qwc/nostruct-align/2qwc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11845/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.314667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b6g
id: 1b6g   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b6g/nostruct-align/1b6g.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27046/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.887665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4kA
id: 1b4kA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4kA/nostruct-align/1b4kA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5257/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.757675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rgeA
id: 1rgeA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rgeA/nostruct-align/1rgeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10871/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.839661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lid
id: 1lid   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lid/nostruct-align/1lid.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24440/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.715652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgf
id: 1bgf   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgf/nostruct-align/1bgf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15038/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.446671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aie
id: 1aie   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aie/nostruct-align/1aie.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17561/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.307663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qhfA
id: 1qhfA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qhfA/nostruct-align/1qhfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9555/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.657669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mtyG
id: 1mtyG   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mtyG/nostruct-align/1mtyG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1776/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.828659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fvkA
id: 1fvkA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fvkA/nostruct-align/1fvkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14006/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.654663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b2pA
id: 1b2pA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b2pA/nostruct-align/1b2pA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7105/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.119659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4xis
id: 4xis   alignment found: /projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4x/4xis/nostruct-align/4xis.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23509/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.367661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mtyD
id: 1mtyD   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mtyD/nostruct-align/1mtyD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30229/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.612656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pviA
id: 2pviA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pviA/nostruct-align/2pviA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13174/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.637665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smd
id: 1smd   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smd/nostruct-align/1smd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5000/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.991653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sak
id: 2sak   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sak/nostruct-align/2sak.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30877/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.110672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1byqA
id: 1byqA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1byqA/nostruct-align/1byqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31735/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.024658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1babB
id: 1babB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1babB/nostruct-align/1babB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22166/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.362671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1g3p
id: 1g3p   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1g3p/nostruct-align/1g3p.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5218/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.498657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xgsA
id: 1xgsA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xgsA/nostruct-align/1xgsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22045/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.542664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3c
id: 1a3c   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3c/nostruct-align/1a3c.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9470/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.376663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cyo
id: 1cyo   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cyo/nostruct-align/1cyo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6727/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.083664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pyp
id: 3pyp   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pyp/nostruct-align/3pyp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24413/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.982666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jer
id: 1jer   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jer/nostruct-align/1jer.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9387/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.811661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vjs
id: 1vjs   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vjs/nostruct-align/1vjs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8922/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.729660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cex
id: 1cex   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cex/nostruct-align/1cex.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7014/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.208664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bzpA
id: 1bzpA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bzpA/nostruct-align/1bzpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-757/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.450653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctj
id: 1ctj   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ctj/nostruct-align/1ctj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8052/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.732651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mroC
id: 1mroC   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mroC/nostruct-align/1mroC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22489/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.650665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mroA
id: 1mroA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mroA/nostruct-align/1mroA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3861/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.678665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1udc
id: 1udc   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1udc/nostruct-align/1udc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20119/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.131653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpeA
id: 1gpeA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gpeA/nostruct-align/1gpeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31835/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.066666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gof
id: 1gof   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gof/nostruct-align/1gof.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24329/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.352661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mroB
id: 1mroB   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mroB/nostruct-align/1mroB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18161/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.852661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8i
id: 1a8i   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8i/nostruct-align/1a8i.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11534/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.799667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dciA
id: 1dciA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dciA/nostruct-align/1dciA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4516/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.771667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ha1
id: 1ha1   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1ha1/nostruct-align/1ha1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29125/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.039673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bk0
id: 1bk0   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bk0/nostruct-align/1bk0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18847/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.600662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6rlxA
id: 6rlxA   alignment found: /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6r/6rlxA/nostruct-align/6rlxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.021667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ajsA
id: 1ajsA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ajsA/nostruct-align/1ajsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28008/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.216660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6rlxB
id: 6rlxB   alignment found: /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6r/6rlxB/nostruct-align/6rlxB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1664/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.358658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fdn
id: 2fdn   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fdn/nostruct-align/2fdn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26565/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.953674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mof
id: 1mof   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mof/nostruct-align/1mof.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19091/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.188660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4pgaA
id: 4pgaA   alignment found: /projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4p/4pgaA/nostruct-align/4pgaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21357/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.255661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1toaA
id: 1toaA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1toaA/nostruct-align/1toaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5433/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.396652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xjo
id: 1xjo   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xjo/nostruct-align/1xjo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15686/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.806671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mrp
id: 1mrp   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mrp/nostruct-align/1mrp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30016/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.902664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fdr
id: 1fdr   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fdr/nostruct-align/1fdr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-751/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.196655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agjA
id: 1agjA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agjA/nostruct-align/1agjA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21522/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.460663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ryc
id: 1ryc   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ryc/nostruct-align/1ryc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9606/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.266663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bfd
id: 1bfd   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bfd/nostruct-align/1bfd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5643/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.567657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdmA
id: 1bdmA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bdmA/nostruct-align/1bdmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19040/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.380661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5rubA
id: 5rubA   alignment found: /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5r/5rubA/nostruct-align/5rubA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12707/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.002655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fglB
id: 1fglB   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fglB/nostruct-align/1fglB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fglB/nostruct-align/1fglB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fglB/nostruct-align/1fglB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21170/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -4.773666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1svfB
id: 1svfB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1svfB/nostruct-align/1svfB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7575/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.918671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2izhB
id: 2izhB   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2izhB/nostruct-align/2izhB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9213/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.594666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pcfA
id: 1pcfA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pcfA/nostruct-align/1pcfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13482/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.962662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1svfA
id: 1svfA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1svfA/nostruct-align/1svfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27005/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.586655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkpA
id: 1bkpA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkpA/nostruct-align/1bkpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9492/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.828659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cb0A
id: 1cb0A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cb0A/nostruct-align/1cb0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26603/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.711655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cv8
id: 1cv8   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cv8/nostruct-align/1cv8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-247/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.387665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rie
id: 1rie   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rie/nostruct-align/1rie.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18041/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.051666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qreA
id: 1qreA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qreA/nostruct-align/1qreA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8275/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdo
id: 1bdo   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bdo/nostruct-align/1bdo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.733658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3seb
id: 3seb   alignment found: /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3s/3seb/nostruct-align/3seb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8418/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.159668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ftrA
id: 1ftrA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1ftrA/nostruct-align/1ftrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13305/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.561661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1al3
id: 1al3   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1al3/nostruct-align/1al3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8289/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.187668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4eugA
id: 4eugA   alignment found: /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4e/4eugA/nostruct-align/4eugA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13957/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.178665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gdoA
id: 1gdoA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gdoA/nostruct-align/1gdoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19476/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.596664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 16pk
id: 16pk   alignment found: /projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/16/16pk/nostruct-align/16pk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22820/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.314667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlfL
id: 1dlfL   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dlfL/nostruct-align/1dlfL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21064/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.655670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lbu
id: 1lbu   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lbu/nostruct-align/1lbu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16063/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.684662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ads
id: 1ads   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ads/nostruct-align/1ads.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-2148/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.491669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dosA
id: 1dosA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dosA/nostruct-align/1dosA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9823/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.294662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ush
id: 1ush   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ush/nostruct-align/1ush.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20602/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.816666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qb7A
id: 1qb7A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qb7A/nostruct-align/1qb7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11526/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.584671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avmA
id: 1avmA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avmA/nostruct-align/1avmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25598/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.231674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yveI
id: 1yveI   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yveI/nostruct-align/1yveI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.966675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mcm
id: 2mcm   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mcm/nostruct-align/2mcm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15185/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.523651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1yI
id: 1a1yI   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1yI/nostruct-align/1a1yI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1yI/nostruct-align/1a1yI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1yI/nostruct-align/1a1yI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3877/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.829666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw9A
id: 1bw9A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw9A/nostruct-align/1bw9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24875/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.364670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bi5A
id: 1bi5A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bi5A/nostruct-align/1bi5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.328659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a9xB
id: 1a9xB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a9xB/nostruct-align/1a9xB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13555/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.967667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2nA
id: 1d2nA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2nA/nostruct-align/1d2nA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16894/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.848663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a28A
id: 1a28A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a28A/nostruct-align/1a28A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12290/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.742661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gd1O
id: 1gd1O   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gd1O/nostruct-align/1gd1O.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31826/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.188660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1edg
id: 1edg   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1edg/nostruct-align/1edg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23454/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.775665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlfH
id: 1dlfH   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dlfH/nostruct-align/1dlfH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.697662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1iA
id: 1a1iA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1iA/nostruct-align/1a1iA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14164/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.297668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfmA
id: 1qfmA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfmA/nostruct-align/1qfmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16634/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.243668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cf9A
id: 1cf9A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cf9A/nostruct-align/1cf9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28520/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.951660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a9xA
id: 1a9xA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a9xA/nostruct-align/1a9xA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2969/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.870667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3lck
id: 3lck   alignment found: /projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3l/3lck/nostruct-align/3lck.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17045/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.589661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcl
id: 1hcl   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcl/nostruct-align/1hcl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2658/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.363663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1whi
id: 1whi   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1whi/nostruct-align/1whi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2038/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.367676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2arcA
id: 2arcA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2arcA/nostruct-align/2arcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7879/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.269653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iibA
id: 1iibA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iibA/nostruct-align/1iibA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24109/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.133667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 451c
id: 451c   alignment found: /projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/45/451c/nostruct-align/451c.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22302/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.008667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b0y
id: 1b0y   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b0y/nostruct-align/1b0y.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b0y/nostruct-align/1b0y.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b0y/nostruct-align/1b0y.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10809/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.300659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qtsA
id: 1qtsA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qtsA/nostruct-align/1qtsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14228/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.138672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hka
id: 1hka   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hka/nostruct-align/1hka.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8146/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.845657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fltV
id: 1fltV   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fltV/nostruct-align/1fltV.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.853668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1svy
id: 1svy   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1svy/nostruct-align/1svy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28384/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.362656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1phnA
id: 1phnA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1phnA/nostruct-align/1phnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32569/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.017670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fus
id: 1fus   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fus/nostruct-align/1fus.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4345/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.310669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fltX
id: 1fltX   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fltX/nostruct-align/1fltX.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.299667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iab
id: 1iab   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iab/nostruct-align/1iab.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32374/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.301651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkrA
id: 1bkrA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkrA/nostruct-align/1bkrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21792/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qddA
id: 1qddA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qddA/nostruct-align/1qddA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10705/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.837677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 153l
id: 153l   alignment found: /projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/15/153l/nostruct-align/153l.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28748/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.376663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5hpgA
id: 5hpgA   alignment found: /projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5h/5hpgA/nostruct-align/5hpgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4936/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.771652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mpgA
id: 1mpgA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mpgA/nostruct-align/1mpgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10445/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.461655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpsA
id: 1dpsA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dpsA/nostruct-align/1dpsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25291/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.549652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cem
id: 1cem   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cem/nostruct-align/1cem.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2306/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.462662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lmb3
id: 1lmb3   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lmb3/nostruct-align/1lmb3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12462/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.637665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qazA
id: 1qazA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qazA/nostruct-align/1qazA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7655/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.455658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mun
id: 1mun   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mun/nostruct-align/1mun.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2134/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.937668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ppn
id: 1ppn   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ppn/nostruct-align/1ppn.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22954/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.536667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cy5A
id: 1cy5A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cy5A/nostruct-align/1cy5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3972/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.654663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oneA
id: 1oneA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oneA/nostruct-align/1oneA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-893/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.406662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bj7
id: 1bj7   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bj7/nostruct-align/1bj7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7328/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.905670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yacA
id: 1yacA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yacA/nostruct-align/1yacA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12793/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.280655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gai
id: 1gai   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gai/nostruct-align/1gai.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.325668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ra9
id: 1ra9   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ra9/nostruct-align/1ra9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.080658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cjcA
id: 1cjcA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cjcA/nostruct-align/1cjcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16717/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.750656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mfmA
id: 1mfmA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mfmA/nostruct-align/1mfmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11652/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.433655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dptA
id: 1dptA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dptA/nostruct-align/1dptA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12175/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.749664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cqwA
id: 1cqwA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cqwA/nostruct-align/1cqwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8455/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.460663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2igd
id: 2igd   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2igd/nostruct-align/2igd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5286/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.093658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3sil
id: 3sil   alignment found: /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3s/3sil/nostruct-align/3sil.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-403/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.224670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vfrA
id: 1vfrA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vfrA/nostruct-align/1vfrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9516/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.503662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sat
id: 1sat   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sat/nostruct-align/1sat.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13651/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.365662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cnzA
id: 1cnzA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cnzA/nostruct-align/1cnzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5872/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.558670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qtwA
id: 1qtwA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qtwA/nostruct-align/1qtwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18102/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.514664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nox
id: 1nox   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nox/nostruct-align/1nox.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11201/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.190674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ezm
id: 1ezm   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ezm/nostruct-align/1ezm.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7502/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.784653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tx4A
id: 1tx4A   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tx4A/nostruct-align/1tx4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10163/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.788666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pymA
id: 1pymA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pymA/nostruct-align/1pymA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17480/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.510666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oaa
id: 1oaa   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oaa/nostruct-align/1oaa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21603/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.759674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1opd
id: 1opd   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1opd/nostruct-align/1opd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12088/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.604660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bueA
id: 1bueA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bueA/nostruct-align/1bueA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20962/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.760666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ayh
id: 2ayh   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2ayh/nostruct-align/2ayh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21404/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.272659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nulA
id: 1nulA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nulA/nostruct-align/1nulA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14867/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.474670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ahjB
id: 2ahjB   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2ahjB/nostruct-align/2ahjB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27999/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.936661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ahjA
id: 2ahjA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2ahjA/nostruct-align/2ahjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32633/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.599655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1guqA
id: 1guqA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1guqA/nostruct-align/1guqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10530/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.797668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7a3hA
id: 7a3hA   alignment found: /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7a/7a3hA/nostruct-align/7a3hA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16156/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.168655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tvxA
id: 1tvxA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tvxA/nostruct-align/1tvxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10184/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.729660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nbcA
id: 1nbcA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nbcA/nostruct-align/1nbcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15964/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.492661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1byi
id: 1byi   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1byi/nostruct-align/1byi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17034/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.998672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pgs
id: 1pgs   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pgs/nostruct-align/1pgs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13743/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.033661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aho
id: 1aho   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aho/nostruct-align/1aho.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32368/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.565674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkf
id: 1bkf   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkf/nostruct-align/1bkf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19005/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.047668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aop
id: 1aop   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aop/nostruct-align/1aop.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26307/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.840668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5pti
id: 5pti   alignment found: /projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5p/5pti/nostruct-align/5pti.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.175659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vns
id: 1vns   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vns/nostruct-align/1vns.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5425/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.524658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1axn
id: 1axn   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1axn/nostruct-align/1axn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19708/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.739670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1atg
id: 1atg   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1atg/nostruct-align/1atg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2665/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.398666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lucA
id: 1lucA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucA/nostruct-align/1lucA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1389/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.631668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mla
id: 1mla   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mla/nostruct-align/1mla.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29415/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.374664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ayl
id: 1ayl   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ayl/nostruct-align/1ayl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22350/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.520660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3d
id: 1c3d   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3d/nostruct-align/1c3d.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6653/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.553650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lucB
id: 1lucB   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lucB/nostruct-align/1lucB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20825/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.267654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qbzA
id: 1qbzA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qbzA/nostruct-align/1qbzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29851/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.420670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nif
id: 1nif   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nif/nostruct-align/1nif.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3940/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.173660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qsaA
id: 1qsaA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qsaA/nostruct-align/1qsaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18500/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.459656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dqsA
id: 1dqsA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dqsA/nostruct-align/1dqsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10767/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.850662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcxA
id: 1qcxA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcxA/nostruct-align/1qcxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20881/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.102676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cxqA
id: 1cxqA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cxqA/nostruct-align/1cxqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13348/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.246674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pamA
id: 1pamA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pamA/nostruct-align/1pamA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7079/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.409668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yge
id: 1yge   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yge/nostruct-align/1yge.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12524/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.122665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bupA
id: 1bupA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bupA/nostruct-align/1bupA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20569/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.999664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqcA
id: 1bqcA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqcA/nostruct-align/1bqcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14721/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.988663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bs0A
id: 1bs0A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bs0A/nostruct-align/1bs0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22348/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.490662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qksA
id: 1qksA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qksA/nostruct-align/1qksA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12577/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.494675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3il8
id: 3il8   alignment found: /projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3i/3il8/nostruct-align/3il8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25115/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.731659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b0nA
id: 1b0nA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b0nA/nostruct-align/1b0nA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29938/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.456665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1u9aA
id: 1u9aA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1u9aA/nostruct-align/1u9aA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9065/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.156662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1doi
id: 1doi   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1doi/nostruct-align/1doi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2816/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.670654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bsg
id: 1bsg   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bsg/nostruct-align/1bsg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6292/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.820663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lopA
id: 1lopA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lopA/nostruct-align/1lopA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.102661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoqA
id: 1aoqA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoqA/nostruct-align/1aoqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3544/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.098663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b0nB
id: 1b0nB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b0nB/nostruct-align/1b0nB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1865/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.135666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vppX
id: 1vppX   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vppX/nostruct-align/1vppX.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19973/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.382660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rtu
id: 1rtu   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rtu/nostruct-align/1rtu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9059/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.693665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdcA
id: 1cdcA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdcA/nostruct-align/1cdcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.014664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fjlA
id: 1fjlA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fjlA/nostruct-align/1fjlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9566/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.574661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1htrB
id: 1htrB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1htrB/nostruct-align/1htrB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25271/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.630661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1augA
id: 1augA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1augA/nostruct-align/1augA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11823/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.244659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bzyA
id: 1bzyA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bzyA/nostruct-align/1bzyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-361/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.596664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8b
id: 1a8b   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8b/nostruct-align/1a8b.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9015/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.728668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aapA
id: 1aapA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aapA/nostruct-align/1aapA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31177/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.155670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amx
id: 1amx   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amx/nostruct-align/1amx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5456/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.887665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vapA
id: 1vapA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vapA/nostruct-align/1vapA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2984/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.116653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1shkA
id: 1shkA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1shkA/nostruct-align/1shkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5559/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.732666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sfp
id: 1sfp   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sfp/nostruct-align/1sfp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8655/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.735657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rfs
id: 1rfs   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rfs/nostruct-align/1rfs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29776/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.855652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aq0A
id: 1aq0A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aq0A/nostruct-align/1aq0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20400/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.640671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dokA
id: 1dokA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dokA/nostruct-align/1dokA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27750/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.444672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hvm
id: 2hvm   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hvm/nostruct-align/2hvm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16776/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.350662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a7cA
id: 1a7cA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a7cA/nostruct-align/1a7cA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.483658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2knt
id: 2knt   alignment found: /projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2k/2knt/nostruct-align/2knt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12832/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.174667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oacA
id: 1oacA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oacA/nostruct-align/1oacA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22725/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.657669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hleA
id: 1hleA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hleA/nostruct-align/1hleA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27919/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.446655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aqm
id: 1aqm   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aqm/nostruct-align/1aqm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29488/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.531662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kapP
id: 1kapP   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kapP/nostruct-align/1kapP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30261/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.664658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8acn
id: 8acn   alignment found: /projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8a/8acn/nostruct-align/8acn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31757/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.131668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mn1
id: 1mn1   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mn1/nostruct-align/1mn1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-162/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.586655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cm4B
id: 1cm4B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cm4B/nostruct-align/1cm4B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cm4B/nostruct-align/1cm4B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cm4B/nostruct-align/1cm4B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17701/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -4.933655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkzA
id: 1bkzA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkzA/nostruct-align/1bkzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16707/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.990662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aboA
id: 1aboA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aboA/nostruct-align/1aboA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23663/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -41.414665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3c2c
id: 3c2c   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3c2c/nostruct-align/3c2c.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28091/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.396667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sur
id: 1sur   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sur/nostruct-align/1sur.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17121/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.448669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uox
id: 1uox   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uox/nostruct-align/1uox.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31822/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.958649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yaiA
id: 1yaiA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yaiA/nostruct-align/1yaiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5360/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.416656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zpdA
id: 1zpdA   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zpdA/nostruct-align/1zpdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6339/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.529663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vpsA
id: 1vpsA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vpsA/nostruct-align/1vpsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20747/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.687653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3daaA
id: 3daaA   alignment found: /projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3d/3daaA/nostruct-align/3daaA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27942/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.012665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nseA
id: 1nseA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nseA/nostruct-align/1nseA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.604675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wwcA
id: 1wwcA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wwcA/nostruct-align/1wwcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25574/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.958664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lou
id: 1lou   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lou/nostruct-align/1lou.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lou/nostruct-align/1lou.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lou/nostruct-align/1lou.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7233/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.463654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b7dA
id: 1b7dA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b7dA/nostruct-align/1b7dA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30315/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.590668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4blmA
id: 4blmA   alignment found: /projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4b/4blmA/nostruct-align/4blmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24857/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.930664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7ahlA
id: 7ahlA   alignment found: /projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7a/7ahlA/nostruct-align/7ahlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11378/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.275665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bn5
id: 1bn5   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bn5/nostruct-align/1bn5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7018/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.585663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a4mA
id: 1a4mA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a4mA/nostruct-align/1a4mA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14574/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.193665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mltA
id: 2mltA   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mltA/nostruct-align/2mltA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31823/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.709671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pnkA
id: 1pnkA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pnkA/nostruct-align/1pnkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8483/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.524673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b2nB
id: 1b2nB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b2nB/nostruct-align/1b2nB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b2nB/nostruct-align/1b2nB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b2nB/nostruct-align/1b2nB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19046/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.075653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1huuA
id: 1huuA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1huuA/nostruct-align/1huuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3588/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.192673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cpo
id: 1cpo   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cpo/nostruct-align/1cpo.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15331/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.147675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vid
id: 1vid   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vid/nostruct-align/1vid.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32757/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.447662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pnkB
id: 1pnkB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pnkB/nostruct-align/1pnkB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7989/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.679657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ppfE
id: 1ppfE   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ppfE/nostruct-align/1ppfE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16039/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.886673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qba
id: 1qba   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qba/nostruct-align/1qba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32450/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.863663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b2nA
id: 1b2nA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b2nA/nostruct-align/1b2nA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b2nA/nostruct-align/1b2nA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b2nA/nostruct-align/1b2nA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4609/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.388657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sgpE
id: 1sgpE   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sgpE/nostruct-align/1sgpE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10356/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.093658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2vhbA
id: 2vhbA   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2vhbA/nostruct-align/2vhbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31542/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.422653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcz
id: 1hcz   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcz/nostruct-align/1hcz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27179/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.865662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8aA
id: 1b8aA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8aA/nostruct-align/1b8aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18890/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.085663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rh4
id: 1rh4   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rh4/nostruct-align/1rh4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13080/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.771667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rmg
id: 1rmg   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rmg/nostruct-align/1rmg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14068/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.596664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pscA
id: 1pscA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pscA/nostruct-align/1pscA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25799/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.059662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pah
id: 1pah   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pah/nostruct-align/1pah.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31480/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.688660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8dA
id: 1b8dA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8dA/nostruct-align/1b8dA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15098/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.049667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1thm
id: 1thm   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1thm/nostruct-align/1thm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13228/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.034668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1clxA
id: 1clxA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1clxA/nostruct-align/1clxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19992/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.214661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhdA
id: 1bhdA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhdA/nostruct-align/1bhdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32527/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.802658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2atjA
id: 2atjA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2atjA/nostruct-align/2atjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20037/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.242661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sftA
id: 1sftA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sftA/nostruct-align/1sftA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6526/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.467667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cgdA
id: 1cgdA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cgdA/nostruct-align/1cgdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cgdA/nostruct-align/1cgdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cgdA/nostruct-align/1cgdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20496/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.051666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aq6A
id: 1aq6A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aq6A/nostruct-align/1aq6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7679/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.887665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nsj
id: 1nsj   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nsj/nostruct-align/1nsj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-204/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.646667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1adoA
id: 1adoA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1adoA/nostruct-align/1adoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10218/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.857666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mdl
id: 1mdl   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mdl/nostruct-align/1mdl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1354/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.325653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2apr
id: 2apr   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2apr/nostruct-align/2apr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16896/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.763657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecfA
id: 1ecfA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecfA/nostruct-align/1ecfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31454/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.540665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1np1A
id: 1np1A   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1np1A/nostruct-align/1np1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-736/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.672668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhe
id: 1bhe   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhe/nostruct-align/1bhe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4921/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.162659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1latA
id: 1latA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1latA/nostruct-align/1latA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28190/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.092667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ayfA
id: 1ayfA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ayfA/nostruct-align/1ayfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3184/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.966660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a34A
id: 1a34A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a34A/nostruct-align/1a34A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9169/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.811661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cot
id: 1cot   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cot/nostruct-align/1cot.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1510/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.076660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8prkA
id: 8prkA   alignment found: /projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8p/8prkA/nostruct-align/8prkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18738/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.361664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dmr
id: 1dmr   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dmr/nostruct-align/1dmr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.610657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gsa
id: 1gsa   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gsa/nostruct-align/1gsa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5633/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.412659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wdnA
id: 1wdnA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wdnA/nostruct-align/1wdnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32309/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.804657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mfiA
id: 1mfiA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mfiA/nostruct-align/1mfiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6287/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.657669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1danT
id: 1danT   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1danT/nostruct-align/1danT.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14919/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.560654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1danU
id: 1danU   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1danU/nostruct-align/1danU.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32605/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.500656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jfrA
id: 1jfrA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jfrA/nostruct-align/1jfrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17579/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.626663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7taa
id: 7taa   alignment found: /projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7t/7taa/nostruct-align/7taa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17114/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.909668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tf4A
id: 1tf4A   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tf4A/nostruct-align/1tf4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7222/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.871658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1co6A
id: 1co6A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1co6A/nostruct-align/1co6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21051/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.802658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b2sD
id: 1b2sD   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b2sD/nostruct-align/1b2sD.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-15426/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.204666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1puc
id: 1puc   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1puc/nostruct-align/1puc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9226/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.634659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sgt
id: 1sgt   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sgt/nostruct-align/1sgt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10122/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.093658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apyB
id: 1apyB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apyB/nostruct-align/1apyB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31186/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.425674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1danH
id: 1danH   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1danH/nostruct-align/1danH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.036652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apyA
id: 1apyA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apyA/nostruct-align/1apyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21837/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.262665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a44
id: 1a44   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a44/nostruct-align/1a44.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27687/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.130661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fce
id: 1fce   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fce/nostruct-align/1fce.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27186/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.946655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jdw
id: 1jdw   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jdw/nostruct-align/1jdw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13085/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.947662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fua
id: 1fua   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fua/nostruct-align/1fua.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28485/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.564667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ir3A
id: 1ir3A   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ir3A/nostruct-align/1ir3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11760/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.660660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cthA
id: 2cthA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cthA/nostruct-align/2cthA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20372/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.290665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pch
id: 1pch   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pch/nostruct-align/1pch.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16622/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.659653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bif
id: 1bif   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bif/nostruct-align/1bif.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1103/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.166656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3tss
id: 3tss   alignment found: /projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3t/3tss/nostruct-align/3tss.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10531/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.271652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkzA
id: 1dkzA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkzA/nostruct-align/1dkzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21094/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.211670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ihsI
id: 1ihsI   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ihsI/nostruct-align/1ihsI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ihsI/nostruct-align/1ihsI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ihsI/nostruct-align/1ihsI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18415/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mkaA
id: 1mkaA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mkaA/nostruct-align/1mkaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16513/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.564651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pud
id: 1pud   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pud/nostruct-align/1pud.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20818/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.892654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1akeA
id: 1akeA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1akeA/nostruct-align/1akeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24081/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.370667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ltnA
id: 2ltnA   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2ltnA/nostruct-align/2ltnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3730/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.780670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a53
id: 1a53   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a53/nostruct-align/1a53.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-404/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.414658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hgxA
id: 1hgxA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hgxA/nostruct-align/1hgxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15926/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.844650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brt
id: 1brt   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brt/nostruct-align/1brt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16512/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.532669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8l
id: 1a8l   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8l/nostruct-align/1a8l.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.905670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cms
id: 3cms   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3cms/nostruct-align/3cms.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32532/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.592651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1memA
id: 1memA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1memA/nostruct-align/1memA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20899/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.485672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b25A
id: 1b25A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b25A/nostruct-align/1b25A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29362/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.258652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hml
id: 1hml   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hml/nostruct-align/1hml.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15767/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.558655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ltnB
id: 2ltnB   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2ltnB/nostruct-align/2ltnB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17405/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.082657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b2vA
id: 1b2vA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b2vA/nostruct-align/1b2vA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-389/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.167664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ltsC
id: 1ltsC   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ltsC/nostruct-align/1ltsC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26573/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.198669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bd3A
id: 1bd3A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bd3A/nostruct-align/1bd3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4202/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.172668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ltsA
id: 1ltsA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ltsA/nostruct-align/1ltsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10139/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.577667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cbs
id: 1cbs   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cbs/nostruct-align/1cbs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-412/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.273666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cxbA
id: 2cxbA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cxbA/nostruct-align/2cxbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18769/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.514664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lkfA
id: 1lkfA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lkfA/nostruct-align/1lkfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15444/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.396667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cbp
id: 2cbp   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cbp/nostruct-align/2cbp.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13215/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.496674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ntn
id: 1ntn   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ntn/nostruct-align/1ntn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24511/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.148666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ptd
id: 2ptd   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2ptd/nostruct-align/2ptd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6422/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.127670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ail
id: 1ail   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ail/nostruct-align/1ail.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7292/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.805664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8tlnE
id: 8tlnE   alignment found: /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8t/8tlnE/nostruct-align/8tlnE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22898/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.653671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gseA
id: 1gseA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gseA/nostruct-align/1gseA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.728668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkcE
id: 1bkcE   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkcE/nostruct-align/1bkcE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10835/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.610672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cghA
id: 1cghA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cghA/nostruct-align/1cghA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.936661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3tdt
id: 3tdt   alignment found: /projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3t/3tdt/nostruct-align/3tdt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1216/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.998672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dorA
id: 2dorA   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dorA/nostruct-align/2dorA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-948/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.327667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tux
id: 1tux   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tux/nostruct-align/1tux.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29160/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.035660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dekA
id: 1dekA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dekA/nostruct-align/1dekA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30158/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.047668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zrn
id: 1zrn   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zrn/nostruct-align/1zrn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15751/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.734665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1esl
id: 1esl   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1esl/nostruct-align/1esl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9588/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.857666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lldA
id: 1lldA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lldA/nostruct-align/1lldA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.142670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1blxA
id: 1blxA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1blxA/nostruct-align/1blxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6156/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.315674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1spgA
id: 1spgA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1spgA/nostruct-align/1spgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-12822/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.321655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1spgB
id: 1spgB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1spgB/nostruct-align/1spgB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-13981/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.451660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yghA
id: 1yghA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yghA/nostruct-align/1yghA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6769/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.545670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ax0
id: 1ax0   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ax0/nostruct-align/1ax0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19165/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.062668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bv1
id: 1bv1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bv1/nostruct-align/1bv1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10465/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.980667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1obpA
id: 1obpA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1obpA/nostruct-align/1obpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13292/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.088654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7fd1
id: 7fd1   alignment found: /projects/compbio/experiments/models.97/pdb/7f/7fd1/nostruct-align/7fd1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7f/7fd1/nostruct-align/7fd1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7f/7fd1/nostruct-align/7fd1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30170/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.495667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2matA
id: 2matA   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2matA/nostruct-align/2matA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.364655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oyc
id: 1oyc   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oyc/nostruct-align/1oyc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13530/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.410660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1que
id: 1que   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1que/nostruct-align/1que.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4681/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.870667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a48
id: 1a48   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a48/nostruct-align/1a48.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23681/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.631653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ceo
id: 1ceo   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceo/nostruct-align/1ceo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1858/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.881668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bg0
id: 1bg0   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bg0/nostruct-align/1bg0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28635/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.039658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxkA
id: 1bxkA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxkA/nostruct-align/1bxkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15762/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.062668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aim
id: 1aim   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aim/nostruct-align/1aim.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16883/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.603668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pprM
id: 1pprM   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pprM/nostruct-align/1pprM.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30391/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.293671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fwcA
id: 1fwcA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fwcA/nostruct-align/1fwcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16943/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.692657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4bcl
id: 4bcl   alignment found: /projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4b/4bcl/nostruct-align/4bcl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5481/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.827667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a58
id: 1a58   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a58/nostruct-align/1a58.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14135/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.120667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fwcB
id: 1fwcB   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fwcB/nostruct-align/1fwcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.110672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aocA
id: 1aocA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aocA/nostruct-align/1aocA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10576/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.847672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1btu
id: 1btu   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1btu/nostruct-align/1btu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8104/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.066666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eso
id: 1eso   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eso/nostruct-align/1eso.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32424/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.938675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a4yB
id: 1a4yB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a4yB/nostruct-align/1a4yB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14009/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.890656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgp
id: 1bgp   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgp/nostruct-align/1bgp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.542664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dun
id: 1dun   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dun/nostruct-align/1dun.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1who
id: 1who   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1who/nostruct-align/1who.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18760/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.409668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tafA
id: 1tafA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tafA/nostruct-align/1tafA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26948/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.478668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tafB
id: 1tafB   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tafB/nostruct-align/1tafB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.774658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jkmB
id: 1jkmB   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jkmB/nostruct-align/1jkmB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16336/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.646667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8q
id: 1a8q   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8q/nostruct-align/1a8q.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20865/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.765671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cb8A
id: 1cb8A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cb8A/nostruct-align/1cb8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2719/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.920654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xer
id: 1xer   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xer/nostruct-align/1xer.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2482/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.086655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1difA
id: 1difA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1difA/nostruct-align/1difA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10541/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.382675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2prk
id: 2prk   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2prk/nostruct-align/2prk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9784/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.825668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ayoA
id: 1ayoA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ayoA/nostruct-align/1ayoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25640/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.480667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2shpA
id: 2shpA   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2shpA/nostruct-align/2shpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1599/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -32.398659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iscA
id: 1iscA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iscA/nostruct-align/1iscA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6755/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.237656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bu5A
id: 1bu5A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bu5A/nostruct-align/1bu5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28389/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.684662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1af7
id: 1af7   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1af7/nostruct-align/1af7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5516/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.657669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fwcC
id: 1fwcC   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fwcC/nostruct-align/1fwcC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27320/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.174667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a4yA
id: 1a4yA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a4yA/nostruct-align/1a4yA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11952/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqp4
id: 1qqp4   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqp4/nostruct-align/1qqp4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12392/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.619659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pcgA
id: 3pcgA   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pcgA/nostruct-align/3pcgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8937/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.413651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ae9A
id: 1ae9A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ae9A/nostruct-align/1ae9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8469/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.106659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqp1
id: 1qqp1   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqp1/nostruct-align/1qqp1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15710/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.156662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecpA
id: 1ecpA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecpA/nostruct-align/1ecpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29599/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.417664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pcgM
id: 3pcgM   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pcgM/nostruct-align/3pcgM.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.361664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqp3
id: 1qqp3   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqp3/nostruct-align/1qqp3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8557/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.899658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a7tA
id: 1a7tA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a7tA/nostruct-align/1a7tA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18315/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.598663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2kinA
id: 2kinA   alignment found: /projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2k/2kinA/nostruct-align/2kinA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29518/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.209656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2kinB
id: 2kinB   alignment found: /projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2k/2kinB/nostruct-align/2kinB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.034668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqp2
id: 1qqp2   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqp2/nostruct-align/1qqp2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27690/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.764664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mho
id: 1mho   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mho/nostruct-align/1mho.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30236/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.760651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nhkL
id: 1nhkL   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nhkL/nostruct-align/1nhkL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10994/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.863663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sltA
id: 1sltA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sltA/nostruct-align/1sltA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13573/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.203674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bf2
id: 1bf2   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bf2/nostruct-align/1bf2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12662/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.762665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fxd
id: 1fxd   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fxd/nostruct-align/1fxd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26607/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.442673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b65A
id: 1b65A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b65A/nostruct-align/1b65A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8527/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.150665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smrA
id: 1smrA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smrA/nostruct-align/1smrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32509/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.697662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1opy
id: 1opy   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1opy/nostruct-align/1opy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1554/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.567657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hmt
id: 1hmt   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hmt/nostruct-align/1hmt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18799/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.750671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fas
id: 1fas   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fas/nostruct-align/1fas.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.175659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3gcb
id: 3gcb   alignment found: /projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3g/3gcb/nostruct-align/3gcb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22524/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.816650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tysB
id: 2tysB   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tysB/nostruct-align/2tysB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22751/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.788666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rom
id: 1rom   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rom/nostruct-align/1rom.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3894/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.335663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1alkA
id: 1alkA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1alkA/nostruct-align/1alkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32299/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.028671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tysA
id: 2tysA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tysA/nostruct-align/2tysA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24010/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.542664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pia
id: 2pia   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pia/nostruct-align/2pia.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18200/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.134659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoeA
id: 1aoeA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoeA/nostruct-align/1aoeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19302/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.442657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aj2
id: 1aj2   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aj2/nostruct-align/1aj2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13045/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.283661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dhkB
id: 1dhkB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dhkB/nostruct-align/1dhkB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20340/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.875671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1han
id: 1han   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1han/nostruct-align/1han.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2009/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.383667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bio
id: 1bio   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bio/nostruct-align/1bio.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16149/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.940659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddt
id: 1ddt   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1ddt/nostruct-align/1ddt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.006668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pjcA
id: 1pjcA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pjcA/nostruct-align/1pjcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11355/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.280655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chmA
id: 1chmA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1chmA/nostruct-align/1chmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20731/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.352661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4sli
id: 4sli   alignment found: /projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4s/4sli/nostruct-align/4sli.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.226654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a78A
id: 1a78A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a78A/nostruct-align/1a78A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8571/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.130661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uag
id: 1uag   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uag/nostruct-align/1uag.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23846/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.676666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ahtH
id: 1ahtH   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ahtH/nostruct-align/1ahtH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23056/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.255661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1azqA
id: 1azqA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1azqA/nostruct-align/1azqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31611/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.915665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1obwA
id: 1obwA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1obwA/nostruct-align/1obwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17664/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.623657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yna
id: 1yna   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yna/nostruct-align/1yna.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14707/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.715668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1svb
id: 1svb   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1svb/nostruct-align/1svb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31565/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.906662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ak1
id: 1ak1   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ak1/nostruct-align/1ak1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28519/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.818665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fha
id: 2fha   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fha/nostruct-align/2fha.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1646/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.189667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xyn
id: 1xyn   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xyn/nostruct-align/1xyn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-673/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.030655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be9A
id: 1be9A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be9A/nostruct-align/1be9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19373/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.765671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdwA
id: 1cdwA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdwA/nostruct-align/1cdwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.912659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8vA
id: 1a8vA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8vA/nostruct-align/1a8vA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13539/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.165665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1by2
id: 1by2   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1by2/nostruct-align/1by2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10916/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.078659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scjB
id: 1scjB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1scjB/nostruct-align/1scjB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17368/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.796661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ema
id: 1ema   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ema/nostruct-align/1ema.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15141/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.531662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ag9A
id: 1ag9A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ag9A/nostruct-align/1ag9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3371/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.892670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ton
id: 1ton   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1ton/nostruct-align/1ton.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12007/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.032654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1burA
id: 1burA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1burA/nostruct-align/1burA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1burA/nostruct-align/1burA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1burA/nostruct-align/1burA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12463/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.628662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b93A
id: 1b93A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b93A/nostruct-align/1b93A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10348/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.002670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dtr
id: 2dtr   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dtr/nostruct-align/2dtr.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1793/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.052658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wba
id: 1wba   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wba/nostruct-align/1wba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32429/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.783676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1whtA
id: 1whtA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1whtA/nostruct-align/1whtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29956/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.850662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cewI
id: 1cewI   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cewI/nostruct-align/1cewI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14792/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1whtB
id: 1whtB   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1whtB/nostruct-align/1whtB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6187/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.032669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wad
id: 1wad   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wad/nostruct-align/1wad.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27898/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.304672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbv
id: 1pbv   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pbv/nostruct-align/1pbv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7016/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.910660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pspA
id: 2pspA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pspA/nostruct-align/2pspA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14233/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.738663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aiu
id: 1aiu   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aiu/nostruct-align/1aiu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28309/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.078659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhtA
id: 1bhtA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhtA/nostruct-align/1bhtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13922/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zfpE
id: 1zfpE   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zfpE/nostruct-align/1zfpE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13302/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.001663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lml
id: 1lml   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lml/nostruct-align/1lml.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19143/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.136658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1icjA
id: 1icjA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1icjA/nostruct-align/1icjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2605/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.060654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mngA
id: 1mngA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mngA/nostruct-align/1mngA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-798/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.462662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1paz
id: 1paz   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1paz/nostruct-align/1paz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22073/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.506653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a88A
id: 1a88A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a88A/nostruct-align/1a88A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31764/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.402664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gox
id: 1gox   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gox/nostruct-align/1gox.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28156/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.290665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pbwA
id: 1pbwA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pbwA/nostruct-align/1pbwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15966/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.699661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eur
id: 1eur   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eur/nostruct-align/1eur.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27881/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.018661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5csmA
id: 5csmA   alignment found: /projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5c/5csmA/nostruct-align/5csmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8053/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.717667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pii
id: 1pii   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pii/nostruct-align/1pii.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16736/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.316666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxvA
id: 1bxvA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxvA/nostruct-align/1bxvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12874/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.180664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1llp
id: 1llp   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1llp/nostruct-align/1llp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2264/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.385666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgvA
id: 1bgvA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgvA/nostruct-align/1bgvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10443/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.196671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mhr
id: 2mhr   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mhr/nostruct-align/2mhr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3434/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.522675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1phm
id: 1phm   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1phm/nostruct-align/1phm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17442/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.256668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prxA
id: 1prxA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prxA/nostruct-align/1prxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2731/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.764664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1shdA
id: 1shdA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1shdA/nostruct-align/1shdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26469/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.056656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vjw
id: 1vjw   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vjw/nostruct-align/1vjw.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4891/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.348663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vls
id: 1vls   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vls/nostruct-align/1vls.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10134/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.650665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fcr
id: 2fcr   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fcr/nostruct-align/2fcr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3700/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.741669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5pal
id: 5pal   alignment found: /projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5p/5pal/nostruct-align/5pal.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21172/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.447662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vsd
id: 1vsd   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vsd/nostruct-align/1vsd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29104/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.426666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3csuA
id: 3csuA   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3csuA/nostruct-align/3csuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20444/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.799667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nsyA
id: 2nsyA   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2nsyA/nostruct-align/2nsyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11405/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.847672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2plc
id: 2plc   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2plc/nostruct-align/2plc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17632/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.527664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aj8A
id: 1aj8A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aj8A/nostruct-align/1aj8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11613/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.985657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tvdA
id: 1tvdA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tvdA/nostruct-align/1tvdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27427/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.598663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1myt
id: 1myt   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1myt/nostruct-align/1myt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27387/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.351669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fmb
id: 1fmb   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fmb/nostruct-align/1fmb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30495/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.512665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pii
id: 2pii   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pii/nostruct-align/2pii.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.550659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jdc
id: 1jdc   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jdc/nostruct-align/1jdc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-998/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.875656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ayx
id: 1ayx   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ayx/nostruct-align/1ayx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15425/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fleI
id: 1fleI   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fleI/nostruct-align/1fleI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5739/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.609650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1opbA
id: 1opbA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1opbA/nostruct-align/1opbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2835/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.029663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1udh
id: 1udh   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1udh/nostruct-align/1udh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5264/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.339661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdb
id: 1bdb   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bdb/nostruct-align/1bdb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24884/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.870667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tmy
id: 1tmy   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tmy/nostruct-align/1tmy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17498/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.838654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ak3A
id: 2ak3A   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2ak3A/nostruct-align/2ak3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20195/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cleA
id: 1cleA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cleA/nostruct-align/1cleA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22723/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.172668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gctA
id: 1gctA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gctA/nostruct-align/1gctA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8133/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.131668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1msc
id: 1msc   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1msc/nostruct-align/1msc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8846/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.598663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vom
id: 1vom   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vom/nostruct-align/1vom.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25251/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.586655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1trkA
id: 1trkA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1trkA/nostruct-align/1trkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8456/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.612671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bea
id: 1bea   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bea/nostruct-align/1bea.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2206/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.837662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wdcA
id: 1wdcA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wdcA/nostruct-align/1wdcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22592/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.463654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dyr
id: 1dyr   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dyr/nostruct-align/1dyr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32226/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.421661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3h
id: 1a3h   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3h/nostruct-align/1a3h.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6922/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.201660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apmI
id: 1apmI   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apmI/nostruct-align/1apmI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11901/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.486664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wdcC
id: 1wdcC   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wdcC/nostruct-align/1wdcC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31271/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.512665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5nul
id: 5nul   alignment found: /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5n/5nul/nostruct-align/5nul.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23524/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.215668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1soxA
id: 1soxA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1soxA/nostruct-align/1soxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7176/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.737656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uok
id: 1uok   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uok/nostruct-align/1uok.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6837/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.936661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1furA
id: 1furA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1furA/nostruct-align/1furA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9005/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.518661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fnc
id: 1fnc   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fnc/nostruct-align/1fnc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15671/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.606659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1f3z
id: 1f3z   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1f3z/nostruct-align/1f3z.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.809662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wdcB
id: 1wdcB   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wdcB/nostruct-align/1wdcB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20619/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.004669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dhqA
id: 2dhqA   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dhqA/nostruct-align/2dhqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10416/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.775665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iow
id: 1iow   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iow/nostruct-align/1iow.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1069/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.376663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iso
id: 1iso   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iso/nostruct-align/1iso.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19355/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.885651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cojA
id: 1cojA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cojA/nostruct-align/1cojA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32505/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.239655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1theA
id: 1theA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1theA/nostruct-align/1theA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25980/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.740662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cl1A
id: 1cl1A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cl1A/nostruct-align/1cl1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-913/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.913666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1alvA
id: 1alvA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1alvA/nostruct-align/1alvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22546/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.392670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vfaB
id: 1vfaB   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vfaB/nostruct-align/1vfaB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4335/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3prn
id: 3prn   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3prn/nostruct-align/3prn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14564/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.978668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7aatA
id: 7aatA   alignment found: /projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7a/7aatA/nostruct-align/7aatA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16864/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.051666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kao
id: 1kao   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kao/nostruct-align/1kao.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21801/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.272675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rhe
id: 2rhe   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rhe/nostruct-align/2rhe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.599655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpe
id: 1dpe   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dpe/nostruct-align/1dpe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6849/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.021667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pty
id: 1pty   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pty/nostruct-align/1pty.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-773/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.523666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1alo
id: 1alo   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1alo/nostruct-align/1alo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1alo/nostruct-align/1alo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1alo/nostruct-align/1alo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30467/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.691666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3crd
id: 3crd   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3crd/nostruct-align/3crd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30513/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.411667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aty
id: 1aty   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aty/nostruct-align/1aty.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10408/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.334671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nmbA
id: 2nmbA   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2nmbA/nostruct-align/2nmbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.803650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mkcA
id: 1mkcA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mkcA/nostruct-align/1mkcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18377/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.570663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ark
id: 1ark   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ark/nostruct-align/1ark.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.109657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pac
id: 2pac   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pac/nostruct-align/2pac.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16145/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.008667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mknA
id: 1mknA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mknA/nostruct-align/1mknA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8106/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.215652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hfh
id: 2hfh   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hfh/nostruct-align/2hfh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10155/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.491669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvh
id: 1bvh   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvh/nostruct-align/1bvh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.005661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ap0
id: 1ap0   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ap0/nostruct-align/1ap0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6126/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.867661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3bbg
id: 3bbg   alignment found: /projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3b/3bbg/nostruct-align/3bbg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32117/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apf
id: 1apf   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apf/nostruct-align/1apf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22983/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.538666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2vik
id: 2vik   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2vik/nostruct-align/2vik.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6078/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.616669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1shcA
id: 1shcA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1shcA/nostruct-align/1shcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16536/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.576675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apj
id: 1apj   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apj/nostruct-align/1apj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15916/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.513672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1roo
id: 1roo   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1roo/nostruct-align/1roo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8351/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.649658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ce3A
id: 1ce3A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ce3A/nostruct-align/1ce3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12646/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.207657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ap8
id: 1ap8   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ap8/nostruct-align/1ap8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30421/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.914658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1svr
id: 1svr   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1svr/nostruct-align/1svr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5304/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.325653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tiu
id: 1tiu   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tiu/nostruct-align/1tiu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32457/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.383667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jwe
id: 1jwe   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jwe/nostruct-align/1jwe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jwe/nostruct-align/1jwe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jwe/nostruct-align/1jwe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.335663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tiv
id: 1tiv   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tiv/nostruct-align/1tiv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30642/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.967667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfh
id: 1cfh   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cfh/nostruct-align/1cfh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21249/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.711670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoy
id: 1aoy   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoy/nostruct-align/1aoy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15570/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.282669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nct
id: 1nct   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nct/nostruct-align/1nct.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13715/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.710663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tfb
id: 1tfb   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tfb/nostruct-align/1tfb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19328/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.301666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tbn
id: 1tbn   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tbn/nostruct-align/1tbn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6938/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.867676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jvr
id: 1jvr   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jvr/nostruct-align/1jvr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23546/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.064667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tle
id: 1tle   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tle/nostruct-align/1tle.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7902/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.899658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1krs
id: 1krs   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1krs/nostruct-align/1krs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4860/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.208664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ksr
id: 1ksr   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1ksr/nostruct-align/1ksr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20153/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.336670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be1
id: 1be1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be1/nostruct-align/1be1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13828/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.805664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bct
id: 1bct   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bct/nostruct-align/1bct.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28965/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.966660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pfsA
id: 1pfsA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pfsA/nostruct-align/1pfsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.890671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pyc
id: 1pyc   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pyc/nostruct-align/1pyc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18229/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.436661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hqi
id: 2hqi   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hqi/nostruct-align/2hqi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26279/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.088669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pij
id: 1pij   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pij/nostruct-align/1pij.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10316/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.115662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pou
id: 1pou   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pou/nostruct-align/1pou.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1948/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.426666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bak
id: 1bak   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bak/nostruct-align/1bak.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28179/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.425659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1baq
id: 1baq   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1baq/nostruct-align/1baq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19754/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.856659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bf8
id: 1bf8   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bf8/nostruct-align/1bf8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16226/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.373672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ngr
id: 1ngr   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ngr/nostruct-align/1ngr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22413/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.879654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pnbB
id: 1pnbB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pnbB/nostruct-align/1pnbB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19440/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.159653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pft
id: 1pft   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pft/nostruct-align/1pft.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28605/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.727661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lfb
id: 2lfb   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lfb/nostruct-align/2lfb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12701/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tam
id: 1tam   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tam/nostruct-align/1tam.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.026672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fsp
id: 2fsp   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fsp/nostruct-align/2fsp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10471/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.836670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfqB
id: 1qfqB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfqB/nostruct-align/1qfqB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18401/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.454666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hgf
id: 2hgf   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hgf/nostruct-align/2hgf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.303650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3mefA
id: 3mefA   alignment found: /projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3m/3mefA/nostruct-align/3mefA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26093/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.830673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhb
id: 1bhb   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhb/nostruct-align/1bhb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9805/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.958664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hp8
id: 2hp8   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hp8/nostruct-align/2hp8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27680/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.019669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qyp
id: 1qyp   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qyp/nostruct-align/1qyp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20310/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.144653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ap7
id: 1ap7   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ap7/nostruct-align/1ap7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6344/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.904663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkq
id: 1bkq   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkq/nostruct-align/1bkq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkq/nostruct-align/1bkq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkq/nostruct-align/1bkq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3251/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.388657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bc4
id: 1bc4   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bc4/nostruct-align/1bc4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28942/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.774658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ret
id: 1ret   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ret/nostruct-align/1ret.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28430/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.814651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auz
id: 1auz   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auz/nostruct-align/1auz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20458/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.422653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2new
id: 2new   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2new/nostruct-align/2new.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.446671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrF
id: 1qcrF   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrF/nostruct-align/1qcrF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10319/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.468658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lefA
id: 2lefA   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lefA/nostruct-align/2lefA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.558670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nkl
id: 1nkl   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nkl/nostruct-align/1nkl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12842/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.648666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8qA
id: 1b8qA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8qA/nostruct-align/1b8qA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5662/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.291656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3gatA
id: 3gatA   alignment found: /projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3g/3gatA/nostruct-align/3gatA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13424/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.636658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bj8
id: 1bj8   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bj8/nostruct-align/1bj8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19409/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.503662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrG
id: 1qcrG   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrG/nostruct-align/1qcrG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11750/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.704666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrK
id: 1qcrK   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrK/nostruct-align/1qcrK.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28978/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.831665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1awj
id: 1awj   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1awj/nostruct-align/1awj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31603/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -45.472656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1awo
id: 1awo   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1awo/nostruct-align/1awo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25943/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -40.970657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrH
id: 1qcrH   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrH/nostruct-align/1qcrH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18159/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.338669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hce
id: 1hce   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hce/nostruct-align/1hce.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6071/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.614670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrJ
id: 1qcrJ   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrJ/nostruct-align/1qcrJ.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7709/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.843658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfe
id: 1cfe   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cfe/nostruct-align/1cfe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16086/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.014664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2abd
id: 2abd   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2abd/nostruct-align/2abd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17666/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.265671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nef
id: 2nef   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2nef/nostruct-align/2nef.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27822/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.794662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eal
id: 1eal   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eal/nostruct-align/1eal.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23015/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.368668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2adx
id: 2adx   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2adx/nostruct-align/2adx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.186676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a5j
id: 1a5j   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a5j/nostruct-align/1a5j.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13982/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.573669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rgf
id: 2rgf   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rgf/nostruct-align/2rgf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9051/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.279663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zwa
id: 1zwa   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zwa/nostruct-align/1zwa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11981/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.872665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbo
id: 1bbo   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbo/nostruct-align/1bbo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20885/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.996658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hdp
id: 1hdp   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hdp/nostruct-align/1hdp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21713/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.548660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zaq
id: 1zaq   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zaq/nostruct-align/1zaq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8780/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.017670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gya
id: 1gya   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gya/nostruct-align/1gya.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.143677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dfd
id: 1dfd   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dfd/nostruct-align/1dfd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-29352/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.553665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zug
id: 1zug   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zug/nostruct-align/1zug.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3825/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.131653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hmcB
id: 1hmcB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hmcB/nostruct-align/1hmcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.048660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hev
id: 1hev   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hev/nostruct-align/1hev.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21376/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.783661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hsm
id: 1hsm   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hsm/nostruct-align/1hsm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18768/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.483673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ezi
id: 2ezi   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ezi/nostruct-align/2ezi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21967/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.905670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4ull
id: 4ull   alignment found: /projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4u/4ull/nostruct-align/4ull.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20107/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.401672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrA
id: 1qcrA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrA/nostruct-align/1qcrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28296/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.975662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hqi
id: 1hqi   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hqi/nostruct-align/1hqi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10878/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.426666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ech
id: 2ech   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ech/nostruct-align/2ech.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17968/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.030670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1def
id: 1def   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1def/nostruct-align/1def.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6606/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.951660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gcf
id: 1gcf   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gcf/nostruct-align/1gcf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24967/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.506668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hrzA
id: 1hrzA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hrzA/nostruct-align/1hrzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18804/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.218658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fyc
id: 1fyc   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fyc/nostruct-align/1fyc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26586/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.104660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1faq
id: 1faq   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1faq/nostruct-align/1faq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18423/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.581665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1skyE
id: 1skyE   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1skyE/nostruct-align/1skyE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28979/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.073654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2brz
id: 2brz   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2brz/nostruct-align/2brz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22125/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.276672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fdm
id: 1fdm   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fdm/nostruct-align/1fdm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-476/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.696671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fht
id: 1fht   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fht/nostruct-align/1fht.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19223/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.402664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cdx
id: 2cdx   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cdx/nostruct-align/2cdx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28693/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.961670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bds
id: 2bds   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bds/nostruct-align/2bds.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17384/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.883667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tbd
id: 2tbd   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tbd/nostruct-align/2tbd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21333/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.585663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zac
id: 1zac   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zac/nostruct-align/1zac.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3725/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.956665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1d
id: 1a1d   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1d/nostruct-align/1a1d.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9253/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.330658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fbr
id: 1fbr   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fbr/nostruct-align/1fbr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8181/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.411667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bb8
id: 2bb8   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bb8/nostruct-align/2bb8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4273/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.423660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1egr
id: 1egr   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1egr/nostruct-align/1egr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3022/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.571655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bby
id: 2bby   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bby/nostruct-align/2bby.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8412/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.220673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ezl
id: 2ezl   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ezl/nostruct-align/2ezl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11825/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.583664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bjxA
id: 2bjxA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bjxA/nostruct-align/2bjxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18999/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.022659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bi6H
id: 2bi6H   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bi6H/nostruct-align/2bi6H.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5953/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.029663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1itm
id: 1itm   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1itm/nostruct-align/1itm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1483/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.703659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1irl
id: 1irl   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1irl/nostruct-align/1irl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26329/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.534668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ah9
id: 1ah9   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ah9/nostruct-align/1ah9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21198/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.499664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fn2
id: 2fn2   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fn2/nostruct-align/2fn2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14817/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.411667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ce4A
id: 1ce4A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ce4A/nostruct-align/1ce4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20294/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.282669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1w
id: 1a1w   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1w/nostruct-align/1a1w.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26789/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.020660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gks
id: 1gks   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gks/nostruct-align/1gks.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31602/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.399658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1irsA
id: 1irsA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1irsA/nostruct-align/1irsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4280/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.155670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sxl
id: 2sxl   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sxl/nostruct-align/2sxl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.165649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1itf
id: 1itf   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1itf/nostruct-align/1itf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16900/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.449661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uxd
id: 1uxd   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uxd/nostruct-align/1uxd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30147/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.530670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uwoA
id: 1uwoA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uwoA/nostruct-align/1uwoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26822/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.695663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ah1
id: 1ah1   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ah1/nostruct-align/1ah1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30246/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jli
id: 1jli   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jli/nostruct-align/1jli.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.768661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1imt
id: 1imt   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1imt/nostruct-align/1imt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11017/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.539658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fow
id: 2fow   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fow/nostruct-align/2fow.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25698/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.718658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tum
id: 1tum   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tum/nostruct-align/1tum.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26503/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.068665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1acz
id: 1acz   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1acz/nostruct-align/1acz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25009/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.541672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tsg
id: 1tsg   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tsg/nostruct-align/1tsg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9012/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.332657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ulp
id: 1ulp   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ulp/nostruct-align/1ulp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2321/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.803665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ezxA
id: 2ezxA   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ezxA/nostruct-align/2ezxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6045/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.708664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ahm
id: 1ahm   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ahm/nostruct-align/1ahm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16906/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.741653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1txm
id: 1txm   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1txm/nostruct-align/1txm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-44/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.391663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tpm
id: 1tpm   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tpm/nostruct-align/1tpm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20214/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.261673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2vgh
id: 2vgh   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2vgh/nostruct-align/2vgh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17242/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.304657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ajyA
id: 1ajyA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ajyA/nostruct-align/1ajyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13446/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.436661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1abv
id: 1abv   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1abv/nostruct-align/1abv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20422/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.499664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ab3
id: 1ab3   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ab3/nostruct-align/1ab3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4560/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.866653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ag4
id: 1ag4   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ag4/nostruct-align/1ag4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30164/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.399658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aj3
id: 1aj3   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aj3/nostruct-align/1aj3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-581/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.772675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agg
id: 1agg   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/experiments/models.97/pdb/1a/1agg/nostruct-align/1agg.t99.a2m.gz
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.049652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wkt
id: 1wkt   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wkt/nostruct-align/1wkt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13741/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.674667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pleA
id: 2pleA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pleA/nostruct-align/2pleA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21569/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.186661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddf
id: 1ddf   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1ddf/nostruct-align/1ddf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9773/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.325653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4tgf
id: 4tgf   alignment found: /projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4t/4tgf/nostruct-align/4tgf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.869675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wjbA
id: 1wjbA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wjbA/nostruct-align/1wjbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11408/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.592667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mak
id: 1mak   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mak/nostruct-align/1mak.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28910/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.641663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iieA
id: 1iieA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iieA/nostruct-align/1iieA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.892670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cur
id: 1cur   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cur/nostruct-align/1cur.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.145660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vtx
id: 1vtx   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vtx/nostruct-align/1vtx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28108/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.241669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mypA
id: 1mypA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mypA/nostruct-align/1mypA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29948/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.836670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vih
id: 1vih   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vih/nostruct-align/1vih.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3872/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.160660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1if1A
id: 1if1A   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1if1A/nostruct-align/1if1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-293/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.951660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ystH
id: 1ystH   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ystH/nostruct-align/1ystH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9937/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gumA
id: 1gumA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gumA/nostruct-align/1gumA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-31324/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.652664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bp7A
id: 1bp7A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bp7A/nostruct-align/1bp7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30375/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.406662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctl
id: 1ctl   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ctl/nostruct-align/1ctl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14412/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.500671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gnhA
id: 1gnhA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gnhA/nostruct-align/1gnhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6044/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.516663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3D
id: 1be3D   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3D/nostruct-align/1be3D.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32275/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.737671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvsB
id: 1bvsB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvsB/nostruct-align/1bvsB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-28136/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.311661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gylA
id: 1gylA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gylA/nostruct-align/1gylA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18024/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.164658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rhi3
id: 1rhi3   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rhi3/nostruct-align/1rhi3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26509/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.859665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b6u
id: 1b6u   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b6u/nostruct-align/1b6u.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23536/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.104660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pdgC
id: 1pdgC   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pdgC/nostruct-align/1pdgC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32701/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.760666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9xB
id: 1b9xB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9xB/nostruct-align/1b9xB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.778671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fpkA
id: 1fpkA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fpkA/nostruct-align/1fpkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20321/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.237671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1e2o
id: 1e2o   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1e2o/nostruct-align/1e2o.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14567/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.694672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mev4
id: 2mev4   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mev4/nostruct-align/2mev4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22497/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.030670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nbmG
id: 1nbmG   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nbmG/nostruct-align/1nbmG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25506/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.399658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1plr
id: 1plr   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1plr/nostruct-align/1plr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4609/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.114670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ercA
id: 2ercA   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ercA/nostruct-align/2ercA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13901/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.558670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3vtk
id: 3vtk   alignment found: /projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3v/3vtk/nostruct-align/3vtk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31776/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.493668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0oD
id: 1a0oD   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0oD/nostruct-align/1a0oD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16806/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.500671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nom
id: 1nom   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nom/nostruct-align/1nom.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27785/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.236664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rveA
id: 2rveA   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rveA/nostruct-align/2rveA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-631/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.391663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kigL
id: 1kigL   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kigL/nostruct-align/1kigL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22674/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.849670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agnA
id: 1agnA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agnA/nostruct-align/1agnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28555/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.215652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uaaA
id: 1uaaA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uaaA/nostruct-align/1uaaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13020/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.680664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tsm
id: 1tsm   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tsm/nostruct-align/1tsm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5465/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.535675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ucz
id: 2ucz   alignment found: /projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2u/2ucz/nostruct-align/2ucz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29617/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.475662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cne
id: 1cne   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cne/nostruct-align/1cne.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31429/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.950668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tahA
id: 1tahA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tahA/nostruct-align/1tahA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32433/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.815674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vbd4
id: 1vbd4   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vbd4/nostruct-align/1vbd4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.731659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bp3A
id: 1bp3A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bp3A/nostruct-align/1bp3A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-29927/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.736664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1an2A
id: 1an2A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1an2A/nostruct-align/1an2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13547/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.509659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vkxA
id: 1vkxA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vkxA/nostruct-align/1vkxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15108/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.106674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tfpA
id: 1tfpA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tfpA/nostruct-align/1tfpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13310/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.571671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bev1
id: 1bev1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bev1/nostruct-align/1bev1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26846/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.658661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dktB
id: 1dktB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dktB/nostruct-align/1dktB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2897/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.176666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b7eA
id: 1b7eA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b7eA/nostruct-align/1b7eA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6933/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.194656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fzaB
id: 1fzaB   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fzaB/nostruct-align/1fzaB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12712/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.397659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pysA
id: 1pysA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pysA/nostruct-align/1pysA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14894/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.413666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agx
id: 1agx   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agx/nostruct-align/1agx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25649/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.414658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgj
id: 1bgj   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgj/nostruct-align/1bgj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8630/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -13.189667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1an7A
id: 1an7A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1an7A/nostruct-align/1an7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25277/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.960663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1otcB
id: 1otcB   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1otcB/nostruct-align/1otcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.189667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ch6A
id: 1ch6A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ch6A/nostruct-align/1ch6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ch6A/nostruct-align/1ch6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ch6A/nostruct-align/1ch6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30360/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.514664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4rnpA
id: 4rnpA   alignment found: /projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4r/4rnpA/nostruct-align/4rnpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1867/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.026657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4dpvZ
id: 4dpvZ   alignment found: /projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4d/4dpvZ/nostruct-align/4dpvZ.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3664/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.313660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrC
id: 1qcrC   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrC/nostruct-align/1qcrC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8999/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.265656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avoB
id: 1avoB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avoB/nostruct-align/1avoB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.839661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fdi
id: 1fdi   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fdi/nostruct-align/1fdi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6221/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.834656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jrhI
id: 1jrhI   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jrhI/nostruct-align/1jrhI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17928/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.233673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1thjA
id: 1thjA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1thjA/nostruct-align/1thjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2101/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.310654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0aA
id: 1a0aA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0aA/nostruct-align/1a0aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20674/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.941666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fgjA
id: 1fgjA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fgjA/nostruct-align/1fgjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.203674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1frvB
id: 1frvB   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1frvB/nostruct-align/1frvB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19734/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.810669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aipE
id: 1aipE   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aipE/nostruct-align/1aipE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26096/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.532654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoiF
id: 1aoiF   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoiF/nostruct-align/1aoiF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5590/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.008652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qatB
id: 1qatB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qatB/nostruct-align/1qatB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15515/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.265671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoiG
id: 1aoiG   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoiG/nostruct-align/1aoiG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.312653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkgB
id: 1dkgB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkgB/nostruct-align/1dkgB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24867/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.513672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1asyA
id: 1asyA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1asyA/nostruct-align/1asyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32595/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.310669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bbvC
id: 2bbvC   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bbvC/nostruct-align/2bbvC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12390/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.525665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1asx
id: 1asx   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1asx/nostruct-align/1asx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1416/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.916656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kmnD
id: 1kmnD   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kmnD/nostruct-align/1kmnD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20086/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.692673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bk6A
id: 1bk6A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bk6A/nostruct-align/1bk6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9504/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.666656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cmaA
id: 1cmaA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cmaA/nostruct-align/1cmaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4512/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.056671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lgsA
id: 2lgsA   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lgsA/nostruct-align/2lgsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pkp
id: 1pkp   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pkp/nostruct-align/1pkp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16241/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a7aA
id: 1a7aA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a7aA/nostruct-align/1a7aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10509/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.694656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agrH
id: 1agrH   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agrH/nostruct-align/1agrH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17041/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.462662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkgD
id: 1dkgD   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkgD/nostruct-align/1dkgD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8383/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.991669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rgs
id: 1rgs   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rgs/nostruct-align/1rgs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-254/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.980667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ab4
id: 1ab4   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ab4/nostruct-align/1ab4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5938/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.177673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fokA
id: 1fokA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fokA/nostruct-align/1fokA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25983/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.486664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1occG
id: 1occG   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1occG/nostruct-align/1occG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2552/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.251663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xxcA
id: 1xxcA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xxcA/nostruct-align/1xxcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5156/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.804657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdi
id: 1cdi   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdi/nostruct-align/1cdi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26281/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.168671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scmA
id: 1scmA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1scmA/nostruct-align/1scmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.309662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1preB
id: 1preB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1preB/nostruct-align/1preB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25371/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.332672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ebpA
id: 1ebpA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ebpA/nostruct-align/1ebpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12763/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.952667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3monB
id: 3monB   alignment found: /projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3m/3monB/nostruct-align/3monB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19462/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.852661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qapA
id: 1qapA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qapA/nostruct-align/1qapA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9943/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.959656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bjoA
id: 1bjoA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bjoA/nostruct-align/1bjoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1919/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.935654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pxtB
id: 1pxtB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pxtB/nostruct-align/1pxtB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-15720/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.039673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7at1B
id: 7at1B   alignment found: /projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7a/7at1B/nostruct-align/7at1B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20845/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.392670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1npoC
id: 1npoC   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1npoC/nostruct-align/1npoC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.721664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlhB
id: 1dlhB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dlhB/nostruct-align/1dlhB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32313/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.003662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1liaA
id: 1liaA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1liaA/nostruct-align/1liaA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-28868/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.007660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mxa
id: 1mxa   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mxa/nostruct-align/1mxa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5628/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.507660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3aig
id: 3aig   alignment found: /projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3a/3aig/nostruct-align/3aig.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-8238/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.709671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2drpA
id: 2drpA   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2drpA/nostruct-align/2drpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.047668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ybvA
id: 1ybvA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ybvA/nostruct-align/1ybvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18986/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.003662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1btmA
id: 1btmA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1btmA/nostruct-align/1btmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11806/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.569656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bib
id: 1bib   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bib/nostruct-align/1bib.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24449/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.931671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rusA
id: 1rusA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rusA/nostruct-align/1rusA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29354/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.987656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ysc
id: 1ysc   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ysc/nostruct-align/1ysc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28504/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.211655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pioA
id: 1pioA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pioA/nostruct-align/1pioA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5922/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.257660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ibcB
id: 1ibcB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ibcB/nostruct-align/1ibcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31654/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.240662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ibcA
id: 1ibcA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ibcA/nostruct-align/1ibcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19850/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.960663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqhG
id: 1bqhG   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqhG/nostruct-align/1bqhG.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-28642/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.973663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1csgA
id: 1csgA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1csgA/nostruct-align/1csgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.174667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vcbC
id: 1vcbC   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vcbC/nostruct-align/1vcbC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11819/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.307663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vcbA
id: 1vcbA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vcbA/nostruct-align/1vcbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6359/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.572662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vcbB
id: 1vcbB   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vcbB/nostruct-align/1vcbB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11630/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.771652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mtnC
id: 1mtnC   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mtnC/nostruct-align/1mtnC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19088/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.963669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bnkA
id: 1bnkA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bnkA/nostruct-align/1bnkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30853/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.540665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nfdA
id: 1nfdA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nfdA/nostruct-align/1nfdA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-13615/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.115662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkdS
id: 1bkdS   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkdS/nostruct-align/1bkdS.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4151/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.493668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1atiB
id: 1atiB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1atiB/nostruct-align/1atiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1866/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.291672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bq3B
id: 1bq3B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bq3B/nostruct-align/1bq3B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8636/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.681656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1anv
id: 1anv   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1anv/nostruct-align/1anv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20232/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.935654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3nodB
id: 3nodB   alignment found: /projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3n/3nodB/nostruct-align/3nodB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16912/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.415665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecrA
id: 1ecrA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecrA/nostruct-align/1ecrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28452/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.784668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nfiE
id: 1nfiE   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nfiE/nostruct-align/1nfiE.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-9418/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.049667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bv5
id: 1bv5   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bv5/nostruct-align/1bv5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bv5/nostruct-align/1bv5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bv5/nostruct-align/1bv5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11073/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.924652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2eiaB
id: 2eiaB   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2eiaB/nostruct-align/2eiaB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6603/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.477661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pex
id: 1pex   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pex/nostruct-align/1pex.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31449/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.143661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a02N
id: 1a02N   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a02N/nostruct-align/1a02N.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26318/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.580658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hkbA
id: 1hkbA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hkbA/nostruct-align/1hkbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19937/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.890671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ahjB
id: 1ahjB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ahjB/nostruct-align/1ahjB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25414/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.986664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smeA
id: 1smeA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smeA/nostruct-align/1smeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.957657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zid
id: 1zid   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zid/nostruct-align/1zid.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3954/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.811661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1elyA
id: 1elyA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1elyA/nostruct-align/1elyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9400/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.060654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sly
id: 1sly   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sly/nostruct-align/1sly.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28345/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.742661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cf7B
id: 1cf7B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cf7B/nostruct-align/1cf7B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22020/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.319656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1parA
id: 1parA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1parA/nostruct-align/1parA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2499/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tkaA
id: 1tkaA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tkaA/nostruct-align/1tkaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31942/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.988663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ggtB
id: 1ggtB   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1ggtB/nostruct-align/1ggtB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-10866/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.140656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zbdB
id: 1zbdB   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zbdB/nostruct-align/1zbdB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26749/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.057663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8bA
id: 1b8bA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8bA/nostruct-align/1b8bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8bA/nostruct-align/1b8bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8bA/nostruct-align/1b8bA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10060/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.731659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1by3A
id: 1by3A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1by3A/nostruct-align/1by3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7689/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.676666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pbgA
id: 3pbgA   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pbgA/nostruct-align/3pbgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11642/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.846664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cmkE
id: 1cmkE   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cmkE/nostruct-align/1cmkE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10615/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.422653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ixmB
id: 1ixmB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ixmB/nostruct-align/1ixmB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29953/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.181671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1arzC
id: 1arzC   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1arzC/nostruct-align/1arzC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32436/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1div
id: 1div   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1div/nostruct-align/1div.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23503/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.051651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lrv
id: 1lrv   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lrv/nostruct-align/1lrv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31708/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.676666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bpoA
id: 1bpoA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bpoA/nostruct-align/1bpoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22669/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.791672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ab8A
id: 1ab8A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ab8A/nostruct-align/1ab8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28896/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.214661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6f
id: 1a6f   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6f/nostruct-align/1a6f.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22877/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.130661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lktA
id: 1lktA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lktA/nostruct-align/1lktA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5923/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.798660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2emo
id: 2emo   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2emo/nostruct-align/2emo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32061/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.541656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cby
id: 1cby   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cby/nostruct-align/1cby.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8991/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.899658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ofgA
id: 1ofgA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ofgA/nostruct-align/1ofgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19467/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.708664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avgI
id: 1avgI   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avgI/nostruct-align/1avgI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21883/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.808655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pil
id: 2pil   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pil/nostruct-align/2pil.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11545/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sig
id: 1sig   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sig/nostruct-align/1sig.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1647/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.615662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1imdA
id: 1imdA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1imdA/nostruct-align/1imdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20291/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.642670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ps1A
id: 1ps1A   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ps1A/nostruct-align/1ps1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6623/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.201660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cawB
id: 1cawB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cawB/nostruct-align/1cawB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13400/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.359665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nksA
id: 1nksA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nksA/nostruct-align/1nksA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15016/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.064667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lxtA
id: 1lxtA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lxtA/nostruct-align/1lxtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17600/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.072662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ytfC
id: 1ytfC   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ytfC/nostruct-align/1ytfC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-629/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.251663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1914
id: 1914   alignment found: /projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/19/1914/nostruct-align/1914.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19397/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.680664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2itg
id: 2itg   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2itg/nostruct-align/2itg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20110/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.700668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6pfkA
id: 6pfkA   alignment found: /projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6p/6pfkA/nostruct-align/6pfkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26497/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.711670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cd1A
id: 1cd1A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cd1A/nostruct-align/1cd1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8721/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.500656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ytfD
id: 1ytfD   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ytfD/nostruct-align/1ytfD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31696/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.467667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kzuB
id: 1kzuB   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kzuB/nostruct-align/1kzuB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26385/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.315659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvp1
id: 1bvp1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvp1/nostruct-align/1bvp1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-566/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.202667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2shkA
id: 2shkA   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2shkA/nostruct-align/2shkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17812/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.246658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1p04A
id: 1p04A   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1p04A/nostruct-align/1p04A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-11015/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.608673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kzuA
id: 1kzuA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kzuA/nostruct-align/1kzuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15901/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.570663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rhoC
id: 1rhoC   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rhoC/nostruct-align/1rhoC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24278/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.471664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2kaiA
id: 2kaiA   alignment found: /projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2k/2kaiA/nostruct-align/2kaiA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-12362/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.863663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0i
id: 1a0i   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0i/nostruct-align/1a0i.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3279/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.375671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ll1
id: 1ll1   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ll1/nostruct-align/1ll1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32741/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.503662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhjA
id: 1bhjA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhjA/nostruct-align/1bhjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6314/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.177658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a7j
id: 1a7j   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a7j/nostruct-align/1a7j.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19837/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.546661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0p
id: 1a0p   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0p/nostruct-align/1a0p.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2324/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.920654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xbrA
id: 1xbrA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xbrA/nostruct-align/1xbrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19435/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.520676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1exnB
id: 1exnB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1exnB/nostruct-align/1exnB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25847/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.045654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jkw
id: 1jkw   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jkw/nostruct-align/1jkw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10873/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.584656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aua
id: 1aua   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aua/nostruct-align/1aua.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1107/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.741669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cknA
id: 1cknA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cknA/nostruct-align/1cknA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13387/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.518677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1umuB
id: 1umuB   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1umuB/nostruct-align/1umuB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26021/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.492661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3crxA
id: 3crxA   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3crxA/nostruct-align/3crxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30898/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.327667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1an9A
id: 1an9A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1an9A/nostruct-align/1an9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.382660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b5tA
id: 1b5tA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b5tA/nostruct-align/1b5tA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.527664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1itbB
id: 1itbB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1itbB/nostruct-align/1itbB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22981/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.155670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aojA
id: 1aojA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aojA/nostruct-align/1aojA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30331/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.418663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2thiA
id: 2thiA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2thiA/nostruct-align/2thiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22274/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.320663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1joa
id: 1joa   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1joa/nostruct-align/1joa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.479660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mspA
id: 1mspA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mspA/nostruct-align/1mspA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15316/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.870667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cg2A
id: 1cg2A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cg2A/nostruct-align/1cg2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9303/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.933655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poiA
id: 1poiA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1poiA/nostruct-align/1poiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23753/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.351654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qg0A
id: 1qg0A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qg0A/nostruct-align/1qg0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15735/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.612656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxwA
id: 1bxwA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxwA/nostruct-align/1bxwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.650665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lnh
id: 1lnh   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lnh/nostruct-align/1lnh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.962662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aurA
id: 1aurA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aurA/nostruct-align/1aurA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14781/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.710663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kcw
id: 1kcw   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kcw/nostruct-align/1kcw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26212/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.297668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2polA
id: 2polA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2polA/nostruct-align/2polA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4418/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.530655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gpr
id: 2gpr   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gpr/nostruct-align/2gpr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1773/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.047668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2viuB
id: 2viuB   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2viuB/nostruct-align/2viuB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6387/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.505661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1knyA
id: 1knyA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1knyA/nostruct-align/1knyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9726/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.374664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dhpA
id: 1dhpA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dhpA/nostruct-align/1dhpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29187/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.535660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1juk
id: 1juk   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1juk/nostruct-align/1juk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4768/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.753662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fuiA
id: 1fuiA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fuiA/nostruct-align/1fuiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20361/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.915665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hntE
id: 2hntE   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hntE/nostruct-align/2hntE.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-13862/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.623657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pyaB
id: 1pyaB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pyaB/nostruct-align/1pyaB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24431/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.901657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bykA
id: 1bykA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bykA/nostruct-align/1bykA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14429/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.732666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ai7A
id: 1ai7A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ai7A/nostruct-align/1ai7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32352/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.355667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lpbA
id: 1lpbA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lpbA/nostruct-align/1lpbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31809/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.295670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qawF
id: 1qawF   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qawF/nostruct-align/1qawF.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-14571/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.606659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sfcB
id: 1sfcB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sfcB/nostruct-align/1sfcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9685/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.930664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sfcE
id: 1sfcE   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sfcE/nostruct-align/1sfcE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.780670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sfcD
id: 1sfcD   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sfcD/nostruct-align/1sfcD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.692657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tc3C
id: 1tc3C   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tc3C/nostruct-align/1tc3C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13041/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.531662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nmtA
id: 1nmtA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nmtA/nostruct-align/1nmtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25183/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.946671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ao6A
id: 1ao6A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ao6A/nostruct-align/1ao6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8562/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.821655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jacA
id: 1jacA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jacA/nostruct-align/1jacA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.357666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1afrA
id: 1afrA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1afrA/nostruct-align/1afrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11306/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.527664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bp1
id: 1bp1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bp1/nostruct-align/1bp1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21216/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.699661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1euu
id: 1euu   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1euu/nostruct-align/1euu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21687/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.422653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2viuA
id: 2viuA   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2viuA/nostruct-align/2viuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6554/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.400665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jmcA
id: 1jmcA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jmcA/nostruct-align/1jmcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20969/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.879669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lghA
id: 1lghA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lghA/nostruct-align/1lghA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20612/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.890656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cnt2
id: 1cnt2   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cnt2/nostruct-align/1cnt2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1419/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.963654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rlw
id: 1rlw   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rlw/nostruct-align/1rlw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13989/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.049652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ihp
id: 1ihp   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ihp/nostruct-align/1ihp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28899/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.750656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ax8
id: 1ax8   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ax8/nostruct-align/1ax8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26276/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.387665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2trcP
id: 2trcP   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2trcP/nostruct-align/2trcP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10375/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.959671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3nA
id: 1b3nA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3nA/nostruct-align/1b3nA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6140/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.398651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xtcC
id: 1xtcC   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xtcC/nostruct-align/1xtcC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17455/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.385666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ullA
id: 3ullA   alignment found: /projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3u/3ullA/nostruct-align/3ullA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3277/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.170670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eaiC
id: 1eaiC   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eaiC/nostruct-align/1eaiC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27206/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.024658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ypdA
id: 1ypdA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ypdA/nostruct-align/1ypdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ypdA/nostruct-align/1ypdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ypdA/nostruct-align/1ypdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25708/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.567657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dubE
id: 2dubE   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dubE/nostruct-align/2dubE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9311/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.688675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mprA
id: 2mprA   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mprA/nostruct-align/2mprA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15021/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.495667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2liv
id: 2liv   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2liv/nostruct-align/2liv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13187/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.930664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlc
id: 1dlc   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dlc/nostruct-align/1dlc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30152/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.176666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chkA
id: 1chkA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1chkA/nostruct-align/1chkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8020/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.745667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4lbd
id: 4lbd   alignment found: /projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4l/4lbd/nostruct-align/4lbd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10490/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.951660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1an8
id: 1an8   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1an8/nostruct-align/1an8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22376/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.991669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3nll
id: 3nll   alignment found: /projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3n/3nll/nostruct-align/3nll.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29593/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.113663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kb5B
id: 1kb5B   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kb5B/nostruct-align/1kb5B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10901/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.849670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tmkA
id: 2tmkA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tmkA/nostruct-align/2tmkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29282/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.694656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ayyA
id: 1ayyA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ayyA/nostruct-align/1ayyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14898/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.173660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fzcA
id: 1fzcA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fzcA/nostruct-align/1fzcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.984665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bl0A
id: 1bl0A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bl0A/nostruct-align/1bl0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16197/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.161667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c25
id: 1c25   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c25/nostruct-align/1c25.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.022675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1g31A
id: 1g31A   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1g31A/nostruct-align/1g31A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.421661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occH
id: 2occH   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occH/nostruct-align/2occH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14988/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.409668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occE
id: 2occE   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occE/nostruct-align/2occE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5632/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.990662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occD
id: 2occD   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occD/nostruct-align/2occD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23912/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.442673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pcnA
id: 3pcnA   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pcnA/nostruct-align/3pcnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.407654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occF
id: 2occF   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occF/nostruct-align/2occF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19796/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.003662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1toh
id: 1toh   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1toh/nostruct-align/1toh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31913/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.636658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occL
id: 2occL   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occL/nostruct-align/2occL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-245/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.254669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dynA
id: 2dynA   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dynA/nostruct-align/2dynA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1912/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.437653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occK
id: 2occK   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occK/nostruct-align/2occK.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14435/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.563660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8y
id: 1a8y   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8y/nostruct-align/1a8y.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6378/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.482666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aj6
id: 1aj6   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aj6/nostruct-align/1aj6.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4439/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.420670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dpg
id: 2dpg   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dpg/nostruct-align/2dpg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20914/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.319656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mnd
id: 1mnd   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mnd/nostruct-align/1mnd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22541/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.283661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fgs
id: 1fgs   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fgs/nostruct-align/1fgs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23714/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.292664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3mddA
id: 3mddA   alignment found: /projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3m/3mddA/nostruct-align/3mddA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19099/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.214661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cbuA
id: 1cbuA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cbuA/nostruct-align/1cbuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6165/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.639664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bo4B
id: 1bo4B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bo4B/nostruct-align/1bo4B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-16270/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.727661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ak4C
id: 1ak4C   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ak4C/nostruct-align/1ak4C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31573/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.039658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ar0A
id: 1ar0A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ar0A/nostruct-align/1ar0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13965/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.413651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1slvA
id: 1slvA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1slvA/nostruct-align/1slvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.168655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aerA
id: 1aerA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aerA/nostruct-align/1aerA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18421/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.468658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bob
id: 1bob   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bob/nostruct-align/1bob.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14513/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.588669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ad6
id: 1ad6   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ad6/nostruct-align/1ad6.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13262/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.313660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ycqA
id: 1ycqA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ycqA/nostruct-align/1ycqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18652/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.420670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2masA
id: 2masA   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2masA/nostruct-align/2masA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22065/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1e2aA
id: 1e2aA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1e2aA/nostruct-align/1e2aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29239/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.438660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jsuC
id: 1jsuC   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jsuC/nostruct-align/1jsuC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1798/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.152664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfyA
id: 1cfyA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cfyA/nostruct-align/1cfyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31258/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.841660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4htcI
id: 4htcI   alignment found: /projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4h/4htcI/nostruct-align/4htcI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12140/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.798660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auq
id: 1auq   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auq/nostruct-align/1auq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22732/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6prcC
id: 6prcC   alignment found: /projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6p/6prcC/nostruct-align/6prcC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22985/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.758667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rpxA
id: 1rpxA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpxA/nostruct-align/1rpxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30351/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.916656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dhy
id: 1dhy   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dhy/nostruct-align/1dhy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.336670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aw5
id: 1aw5   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aw5/nostruct-align/1aw5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22607/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.865662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1am7A
id: 1am7A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1am7A/nostruct-align/1am7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31360/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.634674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ignA
id: 1ignA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ignA/nostruct-align/1ignA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18172/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.397675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ipwA
id: 1ipwA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ipwA/nostruct-align/1ipwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19442/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.547668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tiiD
id: 1tiiD   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tiiD/nostruct-align/1tiiD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6792/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.665665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mnmC
id: 1mnmC   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mnmC/nostruct-align/1mnmC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18648/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.782669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8ohm
id: 8ohm   alignment found: /projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8o/8ohm/nostruct-align/8ohm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30068/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.905655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ndoB
id: 1ndoB   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ndoB/nostruct-align/1ndoB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10524/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.162659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1p32C
id: 1p32C   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1p32C/nostruct-align/1p32C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15556/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tyfA
id: 1tyfA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tyfA/nostruct-align/1tyfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6534/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.396667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aorA
id: 1aorA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aorA/nostruct-align/1aorA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11103/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.388657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ft1A
id: 1ft1A   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1ft1A/nostruct-align/1ft1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.264664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1beo
id: 1beo   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1beo/nostruct-align/1beo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17564/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.791656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smtB
id: 1smtB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smtB/nostruct-align/1smtB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1004/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.206665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b24A
id: 1b24A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b24A/nostruct-align/1b24A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.149658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aa0
id: 1aa0   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aa0/nostruct-align/1aa0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14122/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.878662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b47A
id: 1b47A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b47A/nostruct-align/1b47A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1242/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.033661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a26
id: 1a26   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a26/nostruct-align/1a26.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29936/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.862671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bncB
id: 1bncB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bncB/nostruct-align/1bncB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10059/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.962677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3tA
id: 1b3tA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3tA/nostruct-align/1b3tA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11856/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bc5A
id: 1bc5A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bc5A/nostruct-align/1bc5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.734665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ca4A
id: 1ca4A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ca4A/nostruct-align/1ca4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.901657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zxq
id: 1zxq   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zxq/nostruct-align/1zxq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14413/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.828659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aw8E
id: 1aw8E   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aw8E/nostruct-align/1aw8E.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26120/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdyA
id: 1bdyA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bdyA/nostruct-align/1bdyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10293/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.672653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nsgB
id: 1nsgB   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nsgB/nostruct-align/1nsgB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28866/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.198654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1maz
id: 1maz   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1maz/nostruct-align/1maz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18013/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.892654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bfeA
id: 1bfeA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bfeA/nostruct-align/1bfeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27926/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.516663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1etpA
id: 1etpA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1etpA/nostruct-align/1etpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1520/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.800659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ft1B
id: 1ft1B   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1ft1B/nostruct-align/1ft1B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13782/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.674667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aijL
id: 1aijL   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aijL/nostruct-align/1aijL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23707/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.861664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jxpA
id: 1jxpA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jxpA/nostruct-align/1jxpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27033/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.195663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1delA
id: 1delA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1delA/nostruct-align/1delA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-291/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.803665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tul
id: 1tul   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tul/nostruct-align/1tul.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8019/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.064667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jlyA
id: 1jlyA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jlyA/nostruct-align/1jlyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10854/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.022659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3dapA
id: 3dapA   alignment found: /projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3d/3dapA/nostruct-align/3dapA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10578/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.926651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ftpA
id: 1ftpA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1ftpA/nostruct-align/1ftpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27983/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.318665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occA
id: 2occA   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occA/nostruct-align/2occA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17696/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.946671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nozA
id: 1nozA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nozA/nostruct-align/1nozA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12704/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.208664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ndoA
id: 1ndoA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ndoA/nostruct-align/1ndoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29853/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.537659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bh5A
id: 1bh5A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bh5A/nostruct-align/1bh5A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-20593/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.551651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bg8A
id: 1bg8A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bg8A/nostruct-align/1bg8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11109/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.251663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 12asA
id: 12asA   alignment found: /projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/12/12asA/nostruct-align/12asA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22251/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.614655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bouA
id: 1bouA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bouA/nostruct-align/1bouA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27542/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.084656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auvA
id: 1auvA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auvA/nostruct-align/1auvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21108/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.051666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8kA
id: 1b8kA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8kA/nostruct-align/1b8kA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5764/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.332657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bouB
id: 1bouB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bouB/nostruct-align/1bouB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13789/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.220657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfr
id: 1cfr   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cfr/nostruct-align/1cfr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12336/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.474670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1br9
id: 1br9   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1br9/nostruct-align/1br9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.284668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b54
id: 1b54   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b54/nostruct-align/1b54.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27248/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.817657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sfe
id: 1sfe   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sfe/nostruct-align/1sfe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13885/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.020660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b77A
id: 1b77A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b77A/nostruct-align/1b77A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21187/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.236664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1abrB
id: 1abrB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1abrB/nostruct-align/1abrB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14409/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.241669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rmd
id: 1rmd   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rmd/nostruct-align/1rmd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-305/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.858658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gc1G
id: 1gc1G   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gc1G/nostruct-align/1gc1G.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1as4B
id: 1as4B   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1as4B/nostruct-align/1as4B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32617/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.437668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ygs
id: 1ygs   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ygs/nostruct-align/1ygs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29788/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.214661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auk
id: 1auk   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auk/nostruct-align/1auk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25173/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.441666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mvpA
id: 1mvpA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mvpA/nostruct-align/1mvpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26985/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.557663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1axiB
id: 1axiB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1axiB/nostruct-align/1axiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22432/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.162659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kvs
id: 1kvs   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kvs/nostruct-align/1kvs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5420/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.263657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1goh
id: 1goh   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1goh/nostruct-align/1goh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13905/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.036667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5eau
id: 5eau   alignment found: /projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5e/5eau/nostruct-align/5eau.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24910/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.840668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1csbB
id: 1csbB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1csbB/nostruct-align/1csbB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26953/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.457657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0fA
id: 1a0fA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0fA/nostruct-align/1a0fA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20824/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.558670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2std
id: 2std   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2std/nostruct-align/2std.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9223/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.215668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1acc
id: 1acc   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1acc/nostruct-align/1acc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9040/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.525665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bg1A
id: 1bg1A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bg1A/nostruct-align/1bg1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23355/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.741669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a4sA
id: 1a4sA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a4sA/nostruct-align/1a4sA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14865/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.651657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dar
id: 1dar   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dar/nostruct-align/1dar.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.305664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a49A
id: 1a49A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a49A/nostruct-align/1a49A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.664658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ax4A
id: 1ax4A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ax4A/nostruct-align/1ax4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6710/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.430664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vdfA
id: 1vdfA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vdfA/nostruct-align/1vdfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23956/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.259659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rl6A
id: 1rl6A   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rl6A/nostruct-align/1rl6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efvA
id: 1efvA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efvA/nostruct-align/1efvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22045/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.203674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aikC
id: 1aikC   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aikC/nostruct-align/1aikC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30422/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.186661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ycsB
id: 1ycsB   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ycsB/nostruct-align/1ycsB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25709/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.045654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wpoB
id: 1wpoB   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wpoB/nostruct-align/1wpoB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9423/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.950668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1x
id: 1a1x   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1x/nostruct-align/1a1x.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6117/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.229660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tfr
id: 1tfr   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tfr/nostruct-align/1tfr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9584/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.097656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fmtB
id: 1fmtB   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fmtB/nostruct-align/1fmtB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29030/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.681656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vin
id: 1vin   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vin/nostruct-align/1vin.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14037/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.271652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fjmA
id: 1fjmA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fjmA/nostruct-align/1fjmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30107/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.282669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aol
id: 1aol   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aol/nostruct-align/1aol.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30316/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.728653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6q
id: 1a6q   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6q/nostruct-align/1a6q.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24844/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.314667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvyF
id: 1bvyF   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvyF/nostruct-align/1bvyF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5995/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.663666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rlaA
id: 1rlaA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rlaA/nostruct-align/1rlaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1571/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.967651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1spuB
id: 1spuB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1spuB/nostruct-align/1spuB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3711/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.574661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1reqD
id: 1reqD   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1reqD/nostruct-align/1reqD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20254/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.174667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jpc
id: 1jpc   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jpc/nostruct-align/1jpc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12411/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.972656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3minC
id: 3minC   alignment found: /projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3m/3minC/nostruct-align/3minC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27614/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.665665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1prxB
id: 1prxB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1prxB/nostruct-align/1prxB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30193/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.783661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4fG
id: 1b4fG   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4fG/nostruct-align/1b4fG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28113/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.052673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fivA
id: 2fivA   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fivA/nostruct-align/2fivA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2654/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.606674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bc8C
id: 1bc8C   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bc8C/nostruct-align/1bc8C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14569/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.146667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kwaB
id: 1kwaB   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kwaB/nostruct-align/1kwaB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10296/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.163666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3minB
id: 3minB   alignment found: /projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3m/3minB/nostruct-align/3minB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29816/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.798660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cp2A
id: 1cp2A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cp2A/nostruct-align/1cp2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2001/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.882660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rss
id: 1rss   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rss/nostruct-align/1rss.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20697/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.454651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1at0
id: 1at0   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1at0/nostruct-align/1at0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30016/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.031662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ryp1
id: 1ryp1   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ryp1/nostruct-align/1ryp1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14195/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.144669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ois
id: 1ois   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ois/nostruct-align/1ois.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32759/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.961670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ospO
id: 1ospO   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ospO/nostruct-align/1ospO.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30333/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.906662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1alu
id: 1alu   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1alu/nostruct-align/1alu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3693/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.314651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1skz
id: 1skz   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1skz/nostruct-align/1skz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14812/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.762665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ryp2
id: 1ryp2   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ryp2/nostruct-align/1ryp2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.161667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gr2A
id: 1gr2A   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gr2A/nostruct-align/1gr2A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30520/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.166672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1stmA
id: 1stmA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1stmA/nostruct-align/1stmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31488/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.714676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rypF
id: 1rypF   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rypF/nostruct-align/1rypF.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7924/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.485672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1buoA
id: 1buoA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1buoA/nostruct-align/1buoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19655/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.170670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ad2
id: 1ad2   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ad2/nostruct-align/1ad2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7132/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.784668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mai
id: 1mai   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mai/nostruct-align/1mai.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32216/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.367661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dfx
id: 1dfx   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dfx/nostruct-align/1dfx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32331/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.105667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8h
id: 1a8h   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8h/nostruct-align/1a8h.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22246/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.488663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qa7B
id: 1qa7B   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qa7B/nostruct-align/1qa7B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-16231/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.928665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gotB
id: 1gotB   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gotB/nostruct-align/1gotB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14355/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.826660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1clc
id: 1clc   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1clc/nostruct-align/1clc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.944672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hddA
id: 2hddA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hddA/nostruct-align/2hddA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18604/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sqcA
id: 2sqcA   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sqcA/nostruct-align/2sqcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31486/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.792664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iakA
id: 1iakA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iakA/nostruct-align/1iakA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29981/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.969666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vpsB
id: 1vpsB   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vpsB/nostruct-align/1vpsB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2052/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.716660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sltB
id: 1sltB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sltB/nostruct-align/1sltB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15058/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.049667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amuA
id: 1amuA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amuA/nostruct-align/1amuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19278/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.371658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1idk
id: 1idk   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1idk/nostruct-align/1idk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3581/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fit
id: 1fit   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fit/nostruct-align/1fit.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10639/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.776657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bg7
id: 1bg7   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bg7/nostruct-align/1bg7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16054/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.985657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1guxB
id: 1guxB   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1guxB/nostruct-align/1guxB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7552/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.298660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ayfB
id: 1ayfB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ayfB/nostruct-align/1ayfB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23654/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.817657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1onrA
id: 1onrA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1onrA/nostruct-align/1onrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11628/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.296661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hsbA
id: 1hsbA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hsbA/nostruct-align/1hsbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27912/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.311661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8prkB
id: 8prkB   alignment found: /projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8p/8prkB/nostruct-align/8prkB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-beta-28024/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfoC
id: 1qfoC   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfoC/nostruct-align/1qfoC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5976/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.839661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1m6pA
id: 1m6pA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1m6pA/nostruct-align/1m6pA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24544/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.447662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3bamB
id: 3bamB   alignment found: /projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3b/3bamB/nostruct-align/3bamB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-13192/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.794662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a73A
id: 1a73A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a73A/nostruct-align/1a73A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.745667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3proD
id: 3proD   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3proD/nostruct-align/3proD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26461/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.282669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ak0
id: 1ak0   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ak0/nostruct-align/1ak0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11435/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.757660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1v39
id: 1v39   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1v39/nostruct-align/1v39.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12611/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.154663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rkd
id: 1rkd   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rkd/nostruct-align/1rkd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19567/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.591660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uxy
id: 1uxy   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uxy/nostruct-align/1uxy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26754/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.536667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cczA
id: 1cczA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cczA/nostruct-align/1cczA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1782/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.910660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ytbA
id: 1ytbA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ytbA/nostruct-align/1ytbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31885/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.231659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nfn
id: 1nfn   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nfn/nostruct-align/1nfn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21806/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.991669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gdoB
id: 1gdoB   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gdoB/nostruct-align/1gdoB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25042/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.569672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bg2
id: 1bg2   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bg2/nostruct-align/1bg2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30827/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.904663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2vhbB
id: 2vhbB   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2vhbB/nostruct-align/2vhbB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15693/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.378662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sli
id: 2sli   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sli/nostruct-align/2sli.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21543/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.207672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdmB
id: 1bdmB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bdmB/nostruct-align/1bdmB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4950/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.266663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tvxB
id: 1tvxB   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tvxB/nostruct-align/1tvxB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23752/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.769653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkb
id: 1bkb   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkb/nostruct-align/1bkb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20659/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.490662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aqzB
id: 1aqzB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aqzB/nostruct-align/1aqzB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6293/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.794662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tfe
id: 1tfe   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tfe/nostruct-align/1tfe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14981/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3htsB
id: 3htsB   alignment found: /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3h/3htsB/nostruct-align/3htsB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19443/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.951660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1behA
id: 1behA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1behA/nostruct-align/1behA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31126/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.186661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a2zA
id: 1a2zA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a2zA/nostruct-align/1a2zA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9210/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.588669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mjhB
id: 1mjhB   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mjhB/nostruct-align/1mjhB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.034653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1azo
id: 1azo   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1azo/nostruct-align/1azo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19677/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.999664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fltY
id: 1fltY   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fltY/nostruct-align/1fltY.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26548/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.279663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aohB
id: 1aohB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aohB/nostruct-align/1aohB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21992/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.764664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ahjC
id: 2ahjC   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2ahjC/nostruct-align/2ahjC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4345/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.613663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2msbB
id: 2msbB   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2msbB/nostruct-align/2msbB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26152/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.516663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xikA
id: 1xikA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xikA/nostruct-align/1xikA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13618/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.121674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ido
id: 1ido   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ido/nostruct-align/1ido.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15644/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.329651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ay7B
id: 1ay7B   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ay7B/nostruct-align/1ay7B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5895/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.849655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bc2B
id: 2bc2B   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bc2B/nostruct-align/2bc2B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3497/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.601669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dhn
id: 1dhn   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dhn/nostruct-align/1dhn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25875/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.210663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hmzA
id: 2hmzA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hmzA/nostruct-align/2hmzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8189/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.502670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hft
id: 2hft   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hft/nostruct-align/2hft.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4304/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.518661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xwl
id: 1xwl   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xwl/nostruct-align/1xwl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13314/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.294662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ubpA
id: 1ubpA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ubpA/nostruct-align/1ubpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-82/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.704666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ubpB
id: 1ubpB   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ubpB/nostruct-align/1ubpB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24478/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.151672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1erv
id: 1erv   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1erv/nostruct-align/1erv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27013/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.044662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1phnB
id: 1phnB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1phnB/nostruct-align/1phnB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11002/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.170654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1btkB
id: 1btkB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1btkB/nostruct-align/1btkB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17925/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.352661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bd0A
id: 1bd0A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bd0A/nostruct-align/1bd0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7011/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.716660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1azpA
id: 1azpA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1azpA/nostruct-align/1azpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25322/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.915665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8rucI
id: 8rucI   alignment found: /projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8r/8rucI/nostruct-align/8rucI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15852/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.790665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nddD
id: 1nddD   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nddD/nostruct-align/1nddD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-115/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.275665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gvp
id: 1gvp   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gvp/nostruct-align/1gvp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8180/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.830658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ubpC
id: 1ubpC   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ubpC/nostruct-align/1ubpC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22502/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpsD
id: 1dpsD   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dpsD/nostruct-align/1dpsD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4161/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.873657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dad
id: 1dad   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dad/nostruct-align/1dad.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25133/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.998672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3aA
id: 1b3aA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3aA/nostruct-align/1b3aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27017/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.519669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aquA
id: 1aquA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aquA/nostruct-align/1aquA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26768/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.881668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hfeS
id: 1hfeS   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hfeS/nostruct-align/1hfeS.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11502/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.058655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wer
id: 1wer   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wer/nostruct-align/1wer.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12121/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.463669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pviA
id: 3pviA   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pviA/nostruct-align/3pviA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15150/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.647659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxrA
id: 1bxrA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxrA/nostruct-align/1bxrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10700/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.641663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ugiA
id: 1ugiA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ugiA/nostruct-align/1ugiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12540/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.930664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1akz
id: 1akz   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1akz/nostruct-align/1akz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19232/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.228668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a62
id: 1a62   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a62/nostruct-align/1a62.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30888/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.936661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1t1dA
id: 1t1dA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1t1dA/nostruct-align/1t1dA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.479660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lit
id: 1lit   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lit/nostruct-align/1lit.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-29011/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.853668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kpf
id: 1kpf   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kpf/nostruct-align/1kpf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17267/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.098663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hta
id: 1hta   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hta/nostruct-align/1hta.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21404/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.884674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1awsA
id: 1awsA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1awsA/nostruct-align/1awsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5925/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.070663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bce
id: 2bce   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bce/nostruct-align/2bce.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8715/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.137665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cipA
id: 1cipA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cipA/nostruct-align/1cipA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32633/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.994659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a4iB
id: 1a4iB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a4iB/nostruct-align/1a4iB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10530/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.032654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2arcB
id: 2arcB   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2arcB/nostruct-align/2arcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8157/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.298660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ah7
id: 1ah7   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ah7/nostruct-align/1ah7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21194/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.090652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sns
id: 2sns   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sns/nostruct-align/2sns.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25747/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.889664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1benB
id: 1benB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1benB/nostruct-align/1benB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20303/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.501663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ppt
id: 1ppt   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ppt/nostruct-align/1ppt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13338/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.778656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nxb
id: 1nxb   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nxb/nostruct-align/1nxb.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11968/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.118668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecd
id: 1ecd   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecd/nostruct-align/1ecd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20542/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.358658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pinA
id: 1pinA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pinA/nostruct-align/1pinA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21617/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.458664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a2yB
id: 1a2yB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a2yB/nostruct-align/1a2yB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29453/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.648666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bx7
id: 1bx7   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bx7/nostruct-align/1bx7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20301/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.963669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cbn
id: 1cbn   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cbn/nostruct-align/1cbn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19424/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.609665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b93B
id: 1b93B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b93B/nostruct-align/1b93B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23627/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.024658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agqD
id: 1agqD   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agqD/nostruct-align/1agqD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3493/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.412659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1h2aS
id: 1h2aS   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1h2aS/nostruct-align/1h2aS.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.578659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uch
id: 1uch   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uch/nostruct-align/1uch.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29031/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.238663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3aC
id: 1a3aC   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3aC/nostruct-align/1a3aC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11505/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.004669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6m
id: 1a6m   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6m/nostruct-align/1a6m.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-453/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.453659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jetA
id: 1jetA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jetA/nostruct-align/1jetA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7803/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.902664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1phg
id: 1phg   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1phg/nostruct-align/1phg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8241/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.406662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1atzB
id: 1atzB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1atzB/nostruct-align/1atzB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15897/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.172668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gar
id: 2gar   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gar/nostruct-align/2gar.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25556/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.111649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yveJ
id: 1yveJ   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yveJ/nostruct-align/1yveJ.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19543/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.958649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6mhtA
id: 6mhtA   alignment found: /projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6m/6mhtA/nostruct-align/6mhtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.753662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xnaA
id: 1xnaA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xnaA/nostruct-align/1xnaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25975/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.093658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1z
id: 1a1z   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1z/nostruct-align/1a1z.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1654/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.493668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a32
id: 1a32   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a32/nostruct-align/1a32.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21858/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.470657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a15A
id: 1a15A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a15A/nostruct-align/1a15A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23840/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.777664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a2xB
id: 1a2xB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a2xB/nostruct-align/1a2xB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31532/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.962662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a41
id: 1a41   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a41/nostruct-align/1a41.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.367661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a02J
id: 1a02J   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a02J/nostruct-align/1a02J.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17984/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.448669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3k
id: 1a3k   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3k/nostruct-align/1a3k.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13284/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.157669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a5r
id: 1a5r   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a5r/nostruct-align/1a5r.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2156/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.848663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1tA
id: 1a1tA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1tA/nostruct-align/1a1tA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18527/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.973663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0tP
id: 1a0tP   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0tP/nostruct-align/1a0tP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24237/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.537659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0cA
id: 1a0cA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0cA/nostruct-align/1a0cA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2664/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.207657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6bB
id: 1a6bB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6bB/nostruct-align/1a6bB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.866653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a0hA
id: 1a0hA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a0hA/nostruct-align/1a0hA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-alpha-25984/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a04A
id: 1a04A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a04A/nostruct-align/1a04A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23515/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.540665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a17
id: 1a17   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a17/nostruct-align/1a17.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10642/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.258667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a2vA
id: 1a2vA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a2vA/nostruct-align/1a2vA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11763/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.489655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6s
id: 1a6s   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6s/nostruct-align/1a6s.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25271/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.763672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6jA
id: 1a6jA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6jA/nostruct-align/1a6jA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2793/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.973663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 16vpA
id: 16vpA   alignment found: /projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/16/16vpA/nostruct-align/16vpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2325/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.331665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a79A
id: 1a79A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a79A/nostruct-align/1a79A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9566/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.103653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3qA
id: 1a3qA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3qA/nostruct-align/1a3qA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23455/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.423660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a02F
id: 1a02F   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a02F/nostruct-align/1a02F.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3689/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.518677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a93B
id: 1a93B   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a93B/nostruct-align/1a93B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16678/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.980652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a9v
id: 1a9v   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a9v/nostruct-align/1a9v.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6491/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.860657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a81A
id: 1a81A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a81A/nostruct-align/1a81A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9636/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -36.285667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a87
id: 1a87   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a87/nostruct-align/1a87.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11297/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.434662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a4uA
id: 1a4uA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a4uA/nostruct-align/1a4uA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29376/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.760666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a93A
id: 1a93A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a93A/nostruct-align/1a93A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.073669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aa7A
id: 1aa7A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aa7A/nostruct-align/1aa7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18483/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.613663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a91
id: 1a91   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a91/nostruct-align/1a91.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29150/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.470673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8rA
id: 1a8rA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8rA/nostruct-align/1a8rA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14474/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.392654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a8o
id: 1a8o   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a8o/nostruct-align/1a8o.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27705/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.871658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a5t
id: 1a5t   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a5t/nostruct-align/1a5t.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24553/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.768661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a9nA
id: 1a9nA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a9nA/nostruct-align/1a9nA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15622/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.619659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1abz
id: 1abz   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1abz/nostruct-align/1abz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8008/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.344666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1adx
id: 1adx   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1adx/nostruct-align/1adx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31601/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.186676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6dA
id: 1a6dA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6dA/nostruct-align/1a6dA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25869/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.426666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1afoA
id: 1afoA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1afoA/nostruct-align/1afoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32401/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.097672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a76
id: 1a76   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a76/nostruct-align/1a76.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32683/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.720657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a92A
id: 1a92A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a92A/nostruct-align/1a92A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13749/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.142670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1adjA
id: 1adjA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1adjA/nostruct-align/1adjA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18633/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.046661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ag7
id: 1ag7   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ag7/nostruct-align/1ag7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17827/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.948669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agqA
id: 1agqA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agqA/nostruct-align/1agqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1635/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.234665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a65A
id: 1a65A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a65A/nostruct-align/1a65A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30805/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.401672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ahsA
id: 1ahsA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ahsA/nostruct-align/1ahsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1130/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.844650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ahl
id: 1ahl   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ahl/nostruct-align/1ahl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7067/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agrE
id: 1agrE   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agrE/nostruct-align/1agrE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30108/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.820663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1abwA
id: 1abwA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1abwA/nostruct-align/1abwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15697/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.494659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aiw
id: 1aiw   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aiw/nostruct-align/1aiw.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21141/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.474670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aisB
id: 1aisB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aisB/nostruct-align/1aisB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6754/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.346664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ajj
id: 1ajj   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ajj/nostruct-align/1ajj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10590/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.430664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aayA
id: 1aayA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aayA/nostruct-align/1aayA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7447/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.291672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ak7
id: 1ak7   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ak7/nostruct-align/1ak7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29940/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.688675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ad3A
id: 1ad3A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ad3A/nostruct-align/1ad3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17678/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.224655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ajqA
id: 1ajqA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ajqA/nostruct-align/1ajqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24991/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.348663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agdB
id: 1agdB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agdB/nostruct-align/1agdB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.074677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aihA
id: 1aihA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aihA/nostruct-align/1aihA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28554/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.318665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6cA
id: 1a6cA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6cA/nostruct-align/1a6cA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8971/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.127655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1am2
id: 1am2   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1am2/nostruct-align/1am2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20009/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.795670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1akhA
id: 1akhA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1akhA/nostruct-align/1akhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21547/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.197662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aly
id: 1aly   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aly/nostruct-align/1aly.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28274/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.340668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a36A
id: 1a36A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a36A/nostruct-align/1a36A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16902/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.433655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1am9A
id: 1am9A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1am9A/nostruct-align/1am9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27389/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.235657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aml
id: 1aml   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aml/nostruct-align/1aml.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27069/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1air
id: 1air   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1air/nostruct-align/1air.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-937/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.613663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1an4A
id: 1an4A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1an4A/nostruct-align/1an4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11486/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.711655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ahpA
id: 1ahpA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ahpA/nostruct-align/1ahpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6445/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.096664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ajqB
id: 1ajqB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ajqB/nostruct-align/1ajqB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5688/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.679657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoiA
id: 1aoiA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoiA/nostruct-align/1aoiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21544/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.656662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoiB
id: 1aoiB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoiB/nostruct-align/1aoiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14525/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.255661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1akhB
id: 1akhB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1akhB/nostruct-align/1akhB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoiD
id: 1aoiD   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoiD/nostruct-align/1aoiD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31992/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.318665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoiC
id: 1aoiC   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoiC/nostruct-align/1aoiC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32287/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amk
id: 1amk   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amk/nostruct-align/1amk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13445/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.499664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aq5A
id: 1aq5A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aq5A/nostruct-align/1aq5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10169/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.637665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aqt
id: 1aqt   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aqt/nostruct-align/1aqt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25645/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.554657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aqzA
id: 1aqzA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aqzA/nostruct-align/1aqzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15067/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.768661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1at3A
id: 1at3A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1at3A/nostruct-align/1at3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24313/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.295670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoo
id: 1aoo   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoo/nostruct-align/1aoo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17788/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.576660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1apq
id: 1apq   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1apq/nostruct-align/1apq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32579/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.885666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ac5
id: 1ac5   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ac5/nostruct-align/1ac5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8618/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.654663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ak5
id: 1ak5   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ak5/nostruct-align/1ak5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14562/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.270660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amoA
id: 1amoA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amoA/nostruct-align/1amoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21411/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.728668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ass
id: 1ass   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ass/nostruct-align/1ass.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16565/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aub
id: 1aub   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aub/nostruct-align/1aub.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aub/nostruct-align/1aub.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aub/nostruct-align/1aub.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18190/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoa
id: 1aoa   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoa/nostruct-align/1aoa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19064/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.634659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auuA
id: 1auuA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auuA/nostruct-align/1auuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28964/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.080658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auoA
id: 1auoA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auoA/nostruct-align/1auoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22207/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.814667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auyA
id: 1auyA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auyA/nostruct-align/1auyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27990/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.524673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aoxA
id: 1aoxA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aoxA/nostruct-align/1aoxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13884/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.617676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1arv
id: 1arv   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1arv/nostruct-align/1arv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10937/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.542664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avpA
id: 1avpA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avpA/nostruct-align/1avpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10151/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1atiA
id: 1atiA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1atiA/nostruct-align/1atiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8065/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avyB
id: 1avyB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avyB/nostruct-align/1avyB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.657669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avqA
id: 1avqA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avqA/nostruct-align/1avqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10185/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.659668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avoA
id: 1avoA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avoA/nostruct-align/1avoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-772/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.048660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avaC
id: 1avaC   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avaC/nostruct-align/1avaC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7953/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.726654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aw7A
id: 1aw7A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aw7A/nostruct-align/1aw7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14902/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.180664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aw8B
id: 1aw8B   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aw8B/nostruct-align/1aw8B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32148/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.887665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1av1A
id: 1av1A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1av1A/nostruct-align/1av1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28599/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.711670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avyC
id: 1avyC   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avyC/nostruct-align/1avyC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17579/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.845657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auiB
id: 1auiB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auiB/nostruct-align/1auiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18755/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.180664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aw0
id: 1aw0   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aw0/nostruct-align/1aw0.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25711/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.057663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1awcA
id: 1awcA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1awcA/nostruct-align/1awcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-130/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.255661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1axh
id: 1axh   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1axh/nostruct-align/1axh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7926/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.028671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ayj
id: 1ayj   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1ayj/nostruct-align/1ayj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5261/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.898666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1axj
id: 1axj   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1axj/nostruct-align/1axj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27950/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.948669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auiA
id: 1auiA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auiA/nostruct-align/1auiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31186/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.612656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1azh
id: 1azh   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1azh/nostruct-align/1azh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.810654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b20A
id: 1b20A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b20A/nostruct-align/1b20A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21837/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.815659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1auwA
id: 1auwA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1auwA/nostruct-align/1auwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27687/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.543655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1au7A
id: 1au7A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1au7A/nostruct-align/1au7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.144669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1azsA
id: 1azsA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1azsA/nostruct-align/1azsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.648666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6o
id: 1a6o   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6o/nostruct-align/1a6o.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6o/nostruct-align/1a6o.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6o/nostruct-align/1a6o.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9696/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.744659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aye
id: 1aye   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aye/nostruct-align/1aye.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12101/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.952667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b35A
id: 1b35A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b35A/nostruct-align/1b35A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5398/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b35D
id: 1b35D   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b35D/nostruct-align/1b35D.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11760/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.236664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1az9
id: 1az9   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1az9/nostruct-align/1az9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24022/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.638657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aym1
id: 1aym1   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aym1/nostruct-align/1aym1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1179/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.306671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aym3
id: 1aym3   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aym3/nostruct-align/1aym3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4505/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.887665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b35B
id: 1b35B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b35B/nostruct-align/1b35B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10531/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.366653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1avc
id: 1avc   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1avc/nostruct-align/1avc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18259/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.837662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3eA
id: 1b3eA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3eA/nostruct-align/1b3eA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21094/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4aA
id: 1b4aA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4aA/nostruct-align/1b4aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20818/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.906662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4r
id: 1b4r   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4r/nostruct-align/1b4r.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4r/nostruct-align/1b4r.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4r/nostruct-align/1b4r.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5455/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.225662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b5l
id: 1b5l   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b5l/nostruct-align/1b5l.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31931/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.235672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b66A
id: 1b66A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b66A/nostruct-align/1b66A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22944/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.243668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b64
id: 1b64   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b64/nostruct-align/1b64.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19452/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.633667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4fA
id: 1b4fA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4fA/nostruct-align/1b4fA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30767/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.686661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amj
id: 1amj   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amj/nostruct-align/1amj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.198669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4cA
id: 1b4cA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4cA/nostruct-align/1b4cA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7750/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.445663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b35C
id: 1b35C   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b35C/nostruct-align/1b35C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27549/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.479660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b79A
id: 1b79A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b79A/nostruct-align/1b79A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5642/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.038666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b87A
id: 1b87A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b87A/nostruct-align/1b87A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21548/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.345657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b6e
id: 1b6e   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b6e/nostruct-align/1b6e.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26499/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.750656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1axkA
id: 1axkA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1axkA/nostruct-align/1axkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26573/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.397659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b89A
id: 1b89A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b89A/nostruct-align/1b89A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26341/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.691666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b63A
id: 1b63A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b63A/nostruct-align/1b63A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3468/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.386673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8wA
id: 1b8wA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8wA/nostruct-align/1b8wA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25272/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.774658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aszB
id: 1aszB   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aszB/nostruct-align/1aszB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9904/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.310669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3uA
id: 1b3uA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3uA/nostruct-align/1b3uA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10344/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.135651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8jA
id: 1b8jA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8jA/nostruct-align/1b8jA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2209/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.022659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3rA
id: 1b3rA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3rA/nostruct-align/1b3rA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1244/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.665665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8tA
id: 1b8tA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8tA/nostruct-align/1b8tA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22085/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.504669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b7gO
id: 1b7gO   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b7gO/nostruct-align/1b7gO.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12118/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.977661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8xA
id: 1b8xA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8xA/nostruct-align/1b8xA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21340/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.876663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1agdA
id: 1agdA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1agdA/nostruct-align/1agdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21188/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.290649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aym2
id: 1aym2   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aym2/nostruct-align/1aym2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27801/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.167664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9pA
id: 1b9pA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9pA/nostruct-align/1b9pA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10106/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.939667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9wA
id: 1b9wA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9wA/nostruct-align/1b9wA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31444/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.158661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9yC
id: 1b9yC   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9yC/nostruct-align/1b9yC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2062/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.433670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ba4
id: 1ba4   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1ba4/nostruct-align/1ba4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27578/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9uA
id: 1b9uA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9uA/nostruct-align/1b9uA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.716660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bba
id: 1bba   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bba/nostruct-align/1bba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31342/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.751663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bb9
id: 1bb9   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bb9/nostruct-align/1bb9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30369/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -42.571663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bax
id: 1bax   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bax/nostruct-align/1bax.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15887/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.070663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ba6
id: 1ba6   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1ba6/nostruct-align/1ba6.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.654663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bb1A
id: 1bb1A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bb1A/nostruct-align/1bb1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24931/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.362671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbl
id: 1bbl   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbl/nostruct-align/1bbl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10759/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.185669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b72A
id: 1b72A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b72A/nostruct-align/1b72A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15458/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9dA
id: 1b9dA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9dA/nostruct-align/1b9dA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-299/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.012650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbg
id: 1bbg   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbg/nostruct-align/1bbg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8935/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bazA
id: 1bazA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bazA/nostruct-align/1bazA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32285/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.356674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ba5
id: 1ba5   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1ba5/nostruct-align/1ba5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7894/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.828659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bco
id: 1bco   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bco/nostruct-align/1bco.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3181/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.322662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bcpB
id: 1bcpB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bcpB/nostruct-align/1bcpB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19663/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.231659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bcpA
id: 1bcpA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bcpA/nostruct-align/1bcpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16357/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.586670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bdfA
id: 1bdfA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bdfA/nostruct-align/1bdfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19824/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.756653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bcpD
id: 1bcpD   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bcpD/nostruct-align/1bcpD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6502/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.429672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bbzA
id: 1bbzA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bbzA/nostruct-align/1bbzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24277/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -41.163658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3G
id: 1be3G   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3G/nostruct-align/1be3G.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7579/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.004669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3H
id: 1be3H   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3H/nostruct-align/1be3H.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26313/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.614670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8fA
id: 1b8fA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8fA/nostruct-align/1b8fA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5069/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.283676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3J
id: 1be3J   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3J/nostruct-align/1be3J.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22852/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.857666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3I
id: 1be3I   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3I/nostruct-align/1be3I.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.706665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3F
id: 1be3F   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3F/nostruct-align/1be3F.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27541/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.444656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b7fA
id: 1b7fA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b7fA/nostruct-align/1b7fA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18966/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.841660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3A
id: 1be3A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3A/nostruct-align/1be3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.937653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgk
id: 1bgk   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgk/nostruct-align/1bgk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10576/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.105667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bev4
id: 1bev4   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bev4/nostruct-align/1bev4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13775/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.768661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bde
id: 1bde   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bde/nostruct-align/1bde.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11915/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.889664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bh7
id: 1bh7   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bh7/nostruct-align/1bh7.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bh7/nostruct-align/1bh7.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bh7/nostruct-align/1bh7.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16932/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.287659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bh9B
id: 1bh9B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bh9B/nostruct-align/1bh9B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27025/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.243652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhu
id: 1bhu   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhu/nostruct-align/1bhu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31976/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.492661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bgyE
id: 1bgyE   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bgyE/nostruct-align/1bgyE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15673/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.842667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bh9A
id: 1bh9A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bh9A/nostruct-align/1bh9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13567/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.530655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9zA
id: 1b9zA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9zA/nostruct-align/1b9zA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.745667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bi6H
id: 1bi6H   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bi6H/nostruct-align/1bi6H.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20135/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.029663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1befA
id: 1befA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1befA/nostruct-align/1befA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7086/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.193665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhi
id: 1bhi   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhi/nostruct-align/1bhi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7793/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.454666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bi0
id: 1bi0   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bi0/nostruct-align/1bi0.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31958/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.053665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bjaA
id: 1bjaA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bjaA/nostruct-align/1bjaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11489/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.968658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bia
id: 1bia   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bia/nostruct-align/1bia.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25873/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.079666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bix
id: 1bix   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bix/nostruct-align/1bix.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28863/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.558670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bag
id: 1bag   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bag/nostruct-align/1bag.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12436/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.326660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3B
id: 1be3B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3B/nostruct-align/1be3B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15216/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.992661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bjx
id: 1bjx   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bjx/nostruct-align/1bjx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5705/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.042664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bj4A
id: 1bj4A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bj4A/nostruct-align/1bj4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.128662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bhgA
id: 1bhgA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bhgA/nostruct-align/1bhgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12164/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.823654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bku
id: 1bku   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bku/nostruct-align/1bku.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9085/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.682663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ble
id: 1ble   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1ble/nostruct-align/1ble.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15520/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.860672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bl1
id: 1bl1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bl1/nostruct-align/1bl1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20985/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.048660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bl8A
id: 1bl8A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bl8A/nostruct-align/1bl8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26652/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.148666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bm9A
id: 1bm9A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bm9A/nostruct-align/1bm9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10622/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.155655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmlC
id: 1bmlC   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmlC/nostruct-align/1bmlC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8469/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.503662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmy
id: 1bmy   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmy/nostruct-align/1bmy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmy/nostruct-align/1bmy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmy/nostruct-align/1bmy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11254/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.521667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmfG
id: 1bmfG   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmfG/nostruct-align/1bmfG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10640/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.377670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bkcA
id: 1bkcA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bkcA/nostruct-align/1bkcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23042/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.556656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmtA
id: 1bmtA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmtA/nostruct-align/1bmtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12434/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.693665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ba1
id: 1ba1   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1ba1/nostruct-align/1ba1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18315/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.036652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bm4
id: 1bm4   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bm4/nostruct-align/1bm4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bm4/nostruct-align/1bm4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bm4/nostruct-align/1bm4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9780/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.610657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3jA
id: 1b3jA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3jA/nostruct-align/1b3jA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.005661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bndA
id: 1bndA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bndA/nostruct-align/1bndA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1639/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.432663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b6cB
id: 1b6cB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b6cB/nostruct-align/1b6cB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12662/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.376663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bo4A
id: 1bo4A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bo4A/nostruct-align/1bo4A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21078/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.743668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bnx
id: 1bnx   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bnx/nostruct-align/1bnx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bnx/nostruct-align/1bnx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bnx/nostruct-align/1bnx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9573/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.869659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bj5
id: 1bj5   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bj5/nostruct-align/1bj5.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25672/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.826660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bo9
id: 1bo9   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bo9/nostruct-align/1bo9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bo9/nostruct-align/1bo9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bo9/nostruct-align/1bo9.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3307/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.020660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bo1A
id: 1bo1A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bo1A/nostruct-align/1bo1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26464/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.100662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bk5A
id: 1bk5A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bk5A/nostruct-align/1bk5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9892/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.771667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bowA
id: 1bowA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bowA/nostruct-align/1bowA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19584/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.714661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1boe
id: 1boe   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1boe/nostruct-align/1boe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1boe/nostruct-align/1boe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1boe/nostruct-align/1boe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17403/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.144653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bor
id: 1bor   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bor/nostruct-align/1bor.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5149/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.650665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bglA
id: 1bglA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bglA/nostruct-align/1bglA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25259/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.553665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bncA
id: 1bncA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bncA/nostruct-align/1bncA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19118/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.708664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1boy
id: 1boy   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1boy/nostruct-align/1boy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32434/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.363663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bjwA
id: 1bjwA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bjwA/nostruct-align/1bjwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18839/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.934662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bmx
id: 1bmx   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bmx/nostruct-align/1bmx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20477/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.779663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqv
id: 1bqv   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqv/nostruct-align/1bqv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9033/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.664658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brz
id: 1brz   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brz/nostruct-align/1brz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11504/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.276672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqk
id: 1bqk   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqk/nostruct-align/1bqk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24395/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.550659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqt
id: 1bqt   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqt/nostruct-align/1bqt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26192/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.237671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqsA
id: 1bqsA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqsA/nostruct-align/1bqsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31527/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.363663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqz
id: 1bqz   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqz/nostruct-align/1bqz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1902/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.978668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bpv
id: 1bpv   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bpv/nostruct-align/1bpv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32335/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.492661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brmA
id: 1brmA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brmA/nostruct-align/1brmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17158/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.144669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bpyA
id: 1bpyA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bpyA/nostruct-align/1bpyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12898/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.672668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bs4A
id: 1bs4A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bs4A/nostruct-align/1bs4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1581/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.060654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bt4
id: 1bt4   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bt4/nostruct-align/1bt4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bt4/nostruct-align/1bt4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bt4/nostruct-align/1bt4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4952/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.345673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1btkA
id: 1btkA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1btkA/nostruct-align/1btkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25630/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.804672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bt3A
id: 1bt3A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bt3A/nostruct-align/1bt3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15338/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.540649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bs2A
id: 1bs2A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bs2A/nostruct-align/1bs2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8598/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.139664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqg
id: 1bqg   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqg/nostruct-align/1bqg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19450/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.533661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1buhB
id: 1buhB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1buhB/nostruct-align/1buhB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-30219/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.103668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvb
id: 1bvb   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvb/nostruct-align/1bvb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29917/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.195663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bli
id: 1bli   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bli/nostruct-align/1bli.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29073/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.967667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bv6
id: 1bv6   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bv6/nostruct-align/1bv6.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bv6/nostruct-align/1bv6.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bv6/nostruct-align/1bv6.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1256/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.483658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvwA
id: 1bvwA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvwA/nostruct-align/1bvwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17721/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.088669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw4
id: 1bw4   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw4/nostruct-align/1bw4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15615/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.706665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brwA
id: 1brwA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brwA/nostruct-align/1brwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-462/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.360657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw6
id: 1bw6   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw6/nostruct-align/1bw6.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw6/nostruct-align/1bw6.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw6/nostruct-align/1bw6.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22183/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.450668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw8
id: 1bw8   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw8/nostruct-align/1bw8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw8/nostruct-align/1bw8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw8/nostruct-align/1bw8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9134/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.223663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bu2A
id: 1bu2A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bu2A/nostruct-align/1bu2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.025665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxm
id: 1bxm   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxm/nostruct-align/1bxm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22237/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxiB
id: 1bxiB   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxiB/nostruct-align/1bxiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13537/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.123672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxyA
id: 1bxyA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxyA/nostruct-align/1bxyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27921/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.009674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bquA
id: 1bquA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bquA/nostruct-align/1bquA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10450/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.662659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bx4A
id: 1bx4A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bx4A/nostruct-align/1bx4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14484/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.481659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw0A
id: 1bw0A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw0A/nostruct-align/1bw0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17264/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.089676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1by1A
id: 1by1A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1by1A/nostruct-align/1by1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7753/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.171661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1byl
id: 1byl   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1byl/nostruct-align/1byl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1byl/nostruct-align/1byl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1byl/nostruct-align/1byl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10095/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.512665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1byrA
id: 1byrA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1byrA/nostruct-align/1byrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14212/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.784668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1byfA
id: 1byfA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1byfA/nostruct-align/1byfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11133/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.949677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bzg
id: 1bzg   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bzg/nostruct-align/1bzg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17568/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.350662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bzb
id: 1bzb   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bzb/nostruct-align/1bzb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bzb/nostruct-align/1bzb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bzb/nostruct-align/1bzb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23033/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.683655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bzk
id: 1bzk   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bzk/nostruct-align/1bzk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bzk/nostruct-align/1bzk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bzk/nostruct-align/1bzk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28700/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.849670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c05A
id: 1c05A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c05A/nostruct-align/1c05A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12670/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.690659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1be3C
id: 1be3C   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1be3C/nostruct-align/1be3C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10517/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.332657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c1yB
id: 1c1yB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c1yB/nostruct-align/1c1yB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13302/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.378662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c1lA
id: 1c1lA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c1lA/nostruct-align/1c1lA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12688/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.492661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c28A
id: 1c28A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c28A/nostruct-align/1c28A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23878/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.661667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c2uA
id: 1c2uA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c2uA/nostruct-align/1c2uA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14482/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.701660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c20A
id: 1c20A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c20A/nostruct-align/1c20A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20363/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.968658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1by5A
id: 1by5A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1by5A/nostruct-align/1by5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11828/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.717667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxdA
id: 1bxdA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxdA/nostruct-align/1bxdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12889/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.694656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3wA
id: 1c3wA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3wA/nostruct-align/1c3wA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3687/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.890671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c4eA
id: 1c4eA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c4eA/nostruct-align/1c4eA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2446/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.371658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3yA
id: 1c3yA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3yA/nostruct-align/1c3yA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7822/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.395676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c53
id: 1c53   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c53/nostruct-align/1c53.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2769/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.822662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c9kB
id: 1c9kB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c9kB/nostruct-align/1c9kB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22999/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.639664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ca9A
id: 1ca9A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ca9A/nostruct-align/1ca9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29274/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.950668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cbf
id: 1cbf   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cbf/nostruct-align/1cbf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21466/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.591660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3pA
id: 1c3pA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3pA/nostruct-align/1c3pA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4873/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.738663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ca1
id: 1ca1   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ca1/nostruct-align/1ca1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9816/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.044662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c4xA
id: 1c4xA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c4xA/nostruct-align/1c4xA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1651/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.437668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bjt
id: 1bjt   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bjt/nostruct-align/1bjt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9438/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.769653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cd31
id: 1cd31   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cd31/nostruct-align/1cd31.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17058/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.098663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cd3B
id: 1cd3B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cd3B/nostruct-align/1cd3B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23258/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.190659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cds
id: 1cds   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cds/nostruct-align/1cds.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.267654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ceeB
id: 1ceeB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceeB/nostruct-align/1ceeB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27195/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.762665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cb6A
id: 1cb6A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cb6A/nostruct-align/1cb6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4671/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.784668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cei
id: 1cei   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cei/nostruct-align/1cei.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9886/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.975662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cf7A
id: 1cf7A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cf7A/nostruct-align/1cf7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20396/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cf4B
id: 1cf4B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cf4B/nostruct-align/1cf4B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27160/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.049667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bihA
id: 1bihA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bihA/nostruct-align/1bihA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6927/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.251663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cf1A
id: 1cf1A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cf1A/nostruct-align/1cf1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3292/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.101654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvzA
id: 1bvzA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvzA/nostruct-align/1bvzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13879/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.182663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cjaA
id: 1cjaA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cjaA/nostruct-align/1cjaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32497/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.987671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfi
id: 1cfi   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cfi/nostruct-align/1cfi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27664/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.711670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ck9A
id: 1ck9A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ck9A/nostruct-align/1ck9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27430/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.933670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ckqA
id: 1ckqA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ckqA/nostruct-align/1ckqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18581/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.048676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cjdA
id: 1cjdA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cjdA/nostruct-align/1cjdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27269/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.310669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ckmA
id: 1ckmA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ckmA/nostruct-align/1ckmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31731/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.784668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cklB
id: 1cklB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cklB/nostruct-align/1cklB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.517654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ci0A
id: 1ci0A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ci0A/nostruct-align/1ci0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2075/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.776657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ckeA
id: 1ckeA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ckeA/nostruct-align/1ckeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-659/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.354675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1chuA
id: 1chuA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1chuA/nostruct-align/1chuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31770/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.799652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cl4A
id: 1cl4A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cl4A/nostruct-align/1cl4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6068/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.977676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cezA
id: 1cezA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cezA/nostruct-align/1cezA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1512/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.162659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cmr
id: 1cmr   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cmr/nostruct-align/1cmr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16633/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.303665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ckv
id: 1ckv   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ckv/nostruct-align/1ckv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5672/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.076660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cnt3
id: 1cnt3   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cnt3/nostruct-align/1cnt3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25906/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.482666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cl2A
id: 1cl2A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cl2A/nostruct-align/1cl2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27932/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.929657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cliA
id: 1cliA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cliA/nostruct-align/1cliA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18183/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.423660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ciy
id: 1ciy   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ciy/nostruct-align/1ciy.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15785/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.162674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cii
id: 1cii   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cii/nostruct-align/1cii.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5395/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.980652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cnsA
id: 1cnsA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cnsA/nostruct-align/1cnsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9285/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.479675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1byuA
id: 1byuA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1byuA/nostruct-align/1byuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16592/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.188660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cktA
id: 1cktA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cktA/nostruct-align/1cktA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25602/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.011658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cof
id: 1cof   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cof/nostruct-align/1cof.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.051666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cr1A
id: 1cr1A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cr1A/nostruct-align/1cr1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3998/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.801666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cozA
id: 1cozA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cozA/nostruct-align/1cozA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.846649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cokA
id: 1cokA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cokA/nostruct-align/1cokA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23290/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.554657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1co4A
id: 1co4A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1co4A/nostruct-align/1co4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30213/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.125671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cll
id: 1cll   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cll/nostruct-align/1cll.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8311/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.965668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ct5A
id: 1ct5A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ct5A/nostruct-align/1ct5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4571/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.961655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cto
id: 1cto   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cto/nostruct-align/1cto.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25418/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.506668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctt
id: 1ctt   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ctt/nostruct-align/1ctt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7725/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.868668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cqqA
id: 1cqqA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cqqA/nostruct-align/1cqqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3994/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.924667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cqxA
id: 1cqxA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cqxA/nostruct-align/1cqxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18855/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.374664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ck7A
id: 1ck7A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ck7A/nostruct-align/1ck7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4335/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.385666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctdA
id: 1ctdA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ctdA/nostruct-align/1ctdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30572/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.548660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cw5A
id: 1cw5A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cw5A/nostruct-align/1cw5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.977661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cviA
id: 1cviA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cviA/nostruct-align/1cviA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29151/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.538666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cs8A
id: 1cs8A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cs8A/nostruct-align/1cs8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-alpha-6366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.041656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cxzB
id: 1cxzB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cxzB/nostruct-align/1cxzB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1587/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.845657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cwxA
id: 1cwxA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cwxA/nostruct-align/1cwxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6324/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.300659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cunA
id: 1cunA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cunA/nostruct-align/1cunA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9157/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.779663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cz4A
id: 1cz4A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cz4A/nostruct-align/1cz4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23148/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.615662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d4aA
id: 1d4aA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d4aA/nostruct-align/1d4aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22445/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.480667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d1rA
id: 1d1rA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d1rA/nostruct-align/1d1rA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14140/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.629669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d3yA
id: 1d3yA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d3yA/nostruct-align/1d3yA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14417/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.993652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d4vA
id: 1d4vA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d4vA/nostruct-align/1d4vA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20440/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.869675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1czqA
id: 1czqA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1czqA/nostruct-align/1czqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2950/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.945663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cqeA
id: 1cqeA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cqeA/nostruct-align/1cqeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25907/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.839661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cwvA
id: 1cwvA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cwvA/nostruct-align/1cwvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15289/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.175659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d0nA
id: 1d0nA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d0nA/nostruct-align/1d0nA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7519/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.942657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1czfA
id: 1czfA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1czfA/nostruct-align/1czfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12403/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.193665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cx8B
id: 1cx8B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cx8B/nostruct-align/1cx8B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19572/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.087662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dcpA
id: 1dcpA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dcpA/nostruct-align/1dcpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11691/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.545654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d4tA
id: 1d4tA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d4tA/nostruct-align/1d4tA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3343/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.112656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d66A
id: 1d66A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d66A/nostruct-align/1d66A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9825/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.161667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddbA
id: 1ddbA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1ddbA/nostruct-align/1ddbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26031/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.219666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dbh
id: 1dbh   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dbh/nostruct-align/1dbh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dbh/nostruct-align/1dbh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dbh/nostruct-align/1dbh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31790/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.978668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dapA
id: 1dapA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dapA/nostruct-align/1dapA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28500/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.926651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d9cA
id: 1d9cA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d9cA/nostruct-align/1d9cA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20386/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.796661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddcA
id: 1ddcA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1ddcA/nostruct-align/1ddcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18439/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.939667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d4vB
id: 1d4vB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d4vB/nostruct-align/1d4vB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24964/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.198654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cqkA
id: 1cqkA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cqkA/nostruct-align/1cqkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7787/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.183670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d8cA
id: 1d8cA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d8cA/nostruct-align/1d8cA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20951/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.972656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dnv
id: 1dnv   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dnv/nostruct-align/1dnv.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20658/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.060669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dhs
id: 1dhs   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dhs/nostruct-align/1dhs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23012/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.990662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dipB
id: 1dipB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dipB/nostruct-align/1dipB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27942/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.165665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkgA
id: 1dkgA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkgA/nostruct-align/1dkgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17755/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.752670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eayC
id: 1eayC   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eayC/nostruct-align/1eayC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5412/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.508652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1clqA
id: 1clqA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1clqA/nostruct-align/1clqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31423/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.156662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eciA
id: 1eciA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eciA/nostruct-align/1eciA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4438/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.269669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dipA
id: 1dipA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dipA/nostruct-align/1dipA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23100/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.165665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dssG
id: 1dssG   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dssG/nostruct-align/1dssG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20153/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.176666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ebdC
id: 1ebdC   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ebdC/nostruct-align/1ebdC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19367/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.788666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eerA
id: 1eerA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eerA/nostruct-align/1eerA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17281/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.513657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efuB
id: 1efuB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efuB/nostruct-align/1efuB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25745/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.410660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eerB
id: 1eerB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eerB/nostruct-align/1eerB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19401/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.402664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d5rA
id: 1d5rA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d5rA/nostruct-align/1d5rA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9988/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.568665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1egpA
id: 1egpA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1egpA/nostruct-align/1egpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25229/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.892670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eh2
id: 1eh2   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eh2/nostruct-align/1eh2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24118/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.663651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1djxB
id: 1djxB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1djxB/nostruct-align/1djxB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8596/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.328659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecfB
id: 1ecfB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecfB/nostruct-align/1ecfB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.502670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1emn
id: 1emn   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1emn/nostruct-align/1emn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26795/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.214661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efvB
id: 1efvB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efvB/nostruct-align/1efvB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27971/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.067673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cxlA
id: 1cxlA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cxlA/nostruct-align/1cxlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2159/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.287659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1edhA
id: 1edhA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1edhA/nostruct-align/1edhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9346/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.109665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eagA
id: 1eagA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eagA/nostruct-align/1eagA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.160660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1derA
id: 1derA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1derA/nostruct-align/1derA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14477/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.668671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpgA
id: 1dpgA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dpgA/nostruct-align/1dpgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4398/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.315659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1egaA
id: 1egaA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1egaA/nostruct-align/1egaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7634/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.281662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ehyA
id: 1ehyA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ehyA/nostruct-align/1ehyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16631/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.516663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efnB
id: 1efnB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efnB/nostruct-align/1efnB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32213/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.620667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fadA
id: 1fadA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fadA/nostruct-align/1fadA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24051/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.478668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ery
id: 1ery   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ery/nostruct-align/1ery.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6851/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.840668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1equ
id: 1equ   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1equ/nostruct-align/1equ.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1equ/nostruct-align/1equ.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1equ/nostruct-align/1equ.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22301/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.437668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1evhA
id: 1evhA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1evhA/nostruct-align/1evhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10207/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.714661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1etb1
id: 1etb1   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1etb1/nostruct-align/1etb1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4894/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.598663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1extA
id: 1extA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1extA/nostruct-align/1extA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26134/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.036667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fct
id: 1fct   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fct/nostruct-align/1fct.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3092/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.825668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1far
id: 1far   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1far/nostruct-align/1far.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26457/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.581665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1envA
id: 1envA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1envA/nostruct-align/1envA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29486/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fcdC
id: 1fcdC   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fcdC/nostruct-align/1fcdC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25036/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.999649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fkj
id: 1fkj   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fkj/nostruct-align/1fkj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26876/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.093674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fmtA
id: 1fmtA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fmtA/nostruct-align/1fmtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-800/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.699661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1f13A
id: 1f13A   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1f13A/nostruct-align/1f13A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2960/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.126663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1euhA
id: 1euhA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1euhA/nostruct-align/1euhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11750/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.272659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efcA
id: 1efcA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efcA/nostruct-align/1efcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18868/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.041656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1exnA
id: 1exnA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1exnA/nostruct-align/1exnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31603/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.125671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eut
id: 1eut   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eut/nostruct-align/1eut.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2972/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.796661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eia
id: 1eia   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eia/nostruct-align/1eia.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20261/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.637650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fre
id: 1fre   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fre/nostruct-align/1fre.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23051/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.288666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fumC
id: 1fumC   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fumC/nostruct-align/1fumC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fumC/nostruct-align/1fumC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fumC/nostruct-align/1fumC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14201/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.459671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fumD
id: 1fumD   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fumD/nostruct-align/1fumD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fumD/nostruct-align/1fumD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fumD/nostruct-align/1fumD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24866/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.479660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fumB
id: 1fumB   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fumB/nostruct-align/1fumB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fumB/nostruct-align/1fumB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fumB/nostruct-align/1fumB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22493/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.064667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fsb
id: 1fsb   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fsb/nostruct-align/1fsb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2762/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.447662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fiy
id: 1fiy   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fiy/nostruct-align/1fiy.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31583/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.635651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fsz
id: 1fsz   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fsz/nostruct-align/1fsz.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1871/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fzgD
id: 1fzgD   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fzgD/nostruct-align/1fzgD.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29302/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.666656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gab
id: 1gab   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gab/nostruct-align/1gab.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.299652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1frb
id: 1frb   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1frb/nostruct-align/1frb.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15258/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.394669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fohA
id: 1fohA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fohA/nostruct-align/1fohA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3185/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.457672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dik
id: 1dik   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dik/nostruct-align/1dik.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11021/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.092667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fvl
id: 1fvl   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fvl/nostruct-align/1fvl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19425/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.310669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ghj
id: 1ghj   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1ghj/nostruct-align/1ghj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19560/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.564667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gggB
id: 1gggB   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gggB/nostruct-align/1gggB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22308/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.723663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gln
id: 1gln   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gln/nostruct-align/1gln.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28155/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.979660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gen
id: 1gen   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gen/nostruct-align/1gen.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16095/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gceA
id: 1gceA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gceA/nostruct-align/1gceA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.819656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fnf
id: 1fnf   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fnf/nostruct-align/1fnf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29966/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.787674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdkA
id: 1cdkA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdkA/nostruct-align/1cdkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16105/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.445663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gnwA
id: 1gnwA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gnwA/nostruct-align/1gnwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9011/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.802673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fnhA
id: 1fnhA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fnhA/nostruct-align/1fnhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18871/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.286652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1grj
id: 1grj   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1grj/nostruct-align/1grj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26484/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.001663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpt
id: 1gpt   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gpt/nostruct-align/1gpt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10320/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.862671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1guxA
id: 1guxA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1guxA/nostruct-align/1guxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14448/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.184662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gw4
id: 1gw4   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gw4/nostruct-align/1gw4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31013/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.872665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hjp
id: 1hjp   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hjp/nostruct-align/1hjp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.482666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1havA
id: 1havA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1havA/nostruct-align/1havA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7700/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.730667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fdo
id: 1fdo   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fdo/nostruct-align/1fdo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10032/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.950653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hfh
id: 1hfh   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hfh/nostruct-align/1hfh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25967/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.166672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hleB
id: 1hleB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hleB/nostruct-align/1hleB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8478/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.336670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hp8
id: 1hp8   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hp8/nostruct-align/1hp8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3435/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.019669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gpmA
id: 1gpmA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gpmA/nostruct-align/1gpmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16312/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.069656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hph
id: 1hph   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hph/nostruct-align/1hph.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-117/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.908661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fgkA
id: 1fgkA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fgkA/nostruct-align/1fgkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1239/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.520660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gfs
id: 1gfs   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gfs/nostruct-align/1gfs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gfs/nostruct-align/1gfs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gfs/nostruct-align/1gfs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6510/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.144669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hkcA
id: 1hkcA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hkcA/nostruct-align/1hkcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13968/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.897675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1griA
id: 1griA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1griA/nostruct-align/1griA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18518/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -39.156670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hth
id: 1hth   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hth/nostruct-align/1hth.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hth/nostruct-align/1hth.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hth/nostruct-align/1hth.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23013/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.846664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gtrA
id: 1gtrA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gtrA/nostruct-align/1gtrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4526/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.526672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hssA
id: 1hssA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hssA/nostruct-align/1hssA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10881/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.665665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1htn
id: 1htn   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1htn/nostruct-align/1htn.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22147/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.745667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hiwA
id: 1hiwA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hiwA/nostruct-align/1hiwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25684/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.989655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hwtC
id: 1hwtC   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hwtC/nostruct-align/1hwtC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.848663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hucA
id: 1hucA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hucA/nostruct-align/1hucA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6118/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.692657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ifi
id: 1ifi   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ifi/nostruct-align/1ifi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25737/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.696671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hymA
id: 1hymA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hymA/nostruct-align/1hymA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26850/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.489655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hgeB
id: 1hgeB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hgeB/nostruct-align/1hgeB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-931/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.505661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ifp
id: 1ifp   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ifp/nostruct-align/1ifp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28853/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.658661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ihvA
id: 1ihvA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ihvA/nostruct-align/1ihvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10945/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.914673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iba
id: 1iba   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iba/nostruct-align/1iba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25897/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.135666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1i16
id: 1i16   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1i16/nostruct-align/1i16.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23163/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.537659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gc1H
id: 1gc1H   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gc1H/nostruct-align/1gc1H.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15106/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.112671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ifa
id: 1ifa   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ifa/nostruct-align/1ifa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31257/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.464661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iknA
id: 1iknA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iknA/nostruct-align/1iknA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29703/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.399673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iml
id: 1iml   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iml/nostruct-align/1iml.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7710/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.698654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hyt
id: 1hyt   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hyt/nostruct-align/1hyt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5975/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.616669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iae
id: 1iae   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iae/nostruct-align/1iae.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27168/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.288666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ioj
id: 1ioj   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ioj/nostruct-align/1ioj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26822/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.757660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1irp
id: 1irp   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1irp/nostruct-align/1irp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11262/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.694672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jenB
id: 1jenB   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jenB/nostruct-align/1jenB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19447/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.090668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jenA
id: 1jenA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jenA/nostruct-align/1jenA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17021/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.567657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ixxB
id: 1ixxB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ixxB/nostruct-align/1ixxB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23149/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.605667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ixmA
id: 1ixmA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ixmA/nostruct-align/1ixmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1500/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.153656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iyu
id: 1iyu   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iyu/nostruct-align/1iyu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20247/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.049652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iknD
id: 1iknD   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iknD/nostruct-align/1iknD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.262665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hdmB
id: 1hdmB   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hdmB/nostruct-align/1hdmB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27316/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.330658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kdxA
id: 1kdxA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kdxA/nostruct-align/1kdxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18383/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.448669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kjs
id: 1kjs   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kjs/nostruct-align/1kjs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12024/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.788666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jotA
id: 1jotA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jotA/nostruct-align/1jotA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15536/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.509659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kigI
id: 1kigI   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kigI/nostruct-align/1kigI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14595/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.864670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1junA
id: 1junA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1junA/nostruct-align/1junA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12474/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.525665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ivyA
id: 1ivyA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ivyA/nostruct-align/1ivyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29124/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.257675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kit
id: 1kit   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kit/nostruct-align/1kit.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-55/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.546661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ktx
id: 1ktx   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1ktx/nostruct-align/1ktx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1043/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.527664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jevA
id: 1jevA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jevA/nostruct-align/1jevA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12877/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.913666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1k89
id: 1k89   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1k89/nostruct-align/1k89.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30752/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kum
id: 1kum   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kum/nostruct-align/1kum.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15782/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.541672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1igrA
id: 1igrA   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1igrA/nostruct-align/1igrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27666/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.551666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kas
id: 1kas   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kas/nostruct-align/1kas.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21508/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.422668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1kwaA
id: 1kwaA   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1kwaA/nostruct-align/1kwaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1746/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.278656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1klo
id: 1klo   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1klo/nostruct-align/1klo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2641/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.130661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1heiA
id: 1heiA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1heiA/nostruct-align/1heiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24996/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.900665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jkmA
id: 1jkmA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jkmA/nostruct-align/1jkmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26657/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.646667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lepA
id: 1lepA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lepA/nostruct-align/1lepA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11968/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.163666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lfdA
id: 1lfdA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lfdA/nostruct-align/1lfdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21918/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.910675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lghB
id: 1lghB   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lghB/nostruct-align/1lghB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1075/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.438660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iakB
id: 1iakB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iakB/nostruct-align/1iakB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11742/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.284668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lbeA
id: 1lbeA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lbeA/nostruct-align/1lbeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29834/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.252670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lay
id: 1lay   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lay/nostruct-align/1lay.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10297/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.790665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1led
id: 1led   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1led/nostruct-align/1led.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19356/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.106659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1l92
id: 1l92   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1l92/nostruct-align/1l92.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30982/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.438675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ltaC
id: 1ltaC   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ltaC/nostruct-align/1ltaC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23368/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.384674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lt3A
id: 1lt3A   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lt3A/nostruct-align/1lt3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14193/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.746658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lre
id: 1lre   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lre/nostruct-align/1lre.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8461/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.648651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ljrA
id: 1ljrA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ljrA/nostruct-align/1ljrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14993/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.908661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1igtB
id: 1igtB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1igtB/nostruct-align/1igtB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15275/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.890656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lbd
id: 1lbd   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lbd/nostruct-align/1lbd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12636/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.703674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mbe
id: 1mbe   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mbe/nostruct-align/1mbe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13959/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.193665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lywA
id: 1lywA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lywA/nostruct-align/1lywA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-504/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.011658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mhlA
id: 1mhlA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mhlA/nostruct-align/1mhlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29336/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.827667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lyp
id: 1lyp   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lyp/nostruct-align/1lyp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10229/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.060669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mhdA
id: 1mhdA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mhdA/nostruct-align/1mhdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6321/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.628662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mjoA
id: 1mjoA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mjoA/nostruct-align/1mjoA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-eclipse-25248/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.106659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mhu
id: 1mhu   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mhu/nostruct-align/1mhu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24749/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.156662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mjhA
id: 1mjhA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mjhA/nostruct-align/1mjhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14231/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.248657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mhlC
id: 1mhlC   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mhlC/nostruct-align/1mhlC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.849655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mfs
id: 1mfs   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mfs/nostruct-align/1mfs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29947/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.973663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ksiB
id: 1ksiB   alignment found: /projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1k/1ksiB/nostruct-align/1ksiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22015/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.531662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mnmA
id: 1mnmA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mnmA/nostruct-align/1mnmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24448/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.302673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mslA
id: 1mslA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mslA/nostruct-align/1mslA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3632/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.977661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mpyA
id: 1mpyA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mpyA/nostruct-align/1mpyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-514/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.581650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ncs
id: 1ncs   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ncs/nostruct-align/1ncs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22674/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.365662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nal3
id: 1nal3   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nal3/nostruct-align/1nal3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28555/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.420654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mxb
id: 1mxb   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mxb/nostruct-align/1mxb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20020/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.415665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lvk
id: 1lvk   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lvk/nostruct-align/1lvk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21081/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.533676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lla
id: 1lla   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lla/nostruct-align/1lla.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31537/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.282669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lylA
id: 1lylA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lylA/nostruct-align/1lylA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.520660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lox
id: 1lox   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lox/nostruct-align/1lox.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16014/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.762665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ile
id: 1ile   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ile/nostruct-align/1ile.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10961/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ndh
id: 1ndh   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ndh/nostruct-align/1ndh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.071655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ncx
id: 1ncx   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ncx/nostruct-align/1ncx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4698/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.029663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nedA
id: 1nedA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nedA/nostruct-align/1nedA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29658/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.144669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1new
id: 1new   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1new/nostruct-align/1new.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13065/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.446671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ng1
id: 1ng1   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ng1/nostruct-align/1ng1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18008/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.998672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nglA
id: 1nglA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nglA/nostruct-align/1nglA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9843/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.739670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nkr
id: 1nkr   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nkr/nostruct-align/1nkr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-963/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.988663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nf1A
id: 1nf1A   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nf1A/nostruct-align/1nf1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15667/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.162659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ntcA
id: 1ntcA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ntcA/nostruct-align/1ntcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31450/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.905670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nukA
id: 1nukA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nukA/nostruct-align/1nukA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.409653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lvl
id: 1lvl   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lvl/nostruct-align/1lvl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2619/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.723663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ocrD
id: 1ocrD   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ocrD/nostruct-align/1ocrD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12863/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.414658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1opp
id: 1opp   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1opp/nostruct-align/1opp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18078/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.841660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mh1
id: 1mh1   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mh1/nostruct-align/1mh1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28588/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.349670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1p32A
id: 1p32A   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1p32A/nostruct-align/1p32A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2584/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pauB
id: 1pauB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pauB/nostruct-align/1pauB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30427/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.058670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pauA
id: 1pauA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pauA/nostruct-align/1pauA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.842651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1npoA
id: 1npoA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1npoA/nostruct-align/1npoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29779/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.710663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ounA
id: 1ounA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ounA/nostruct-align/1ounA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24742/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.305664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1opc
id: 1opc   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1opc/nostruct-align/1opc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20222/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.433670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pdkB
id: 1pdkB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pdkB/nostruct-align/1pdkB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23402/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pfiA
id: 1pfiA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pfiA/nostruct-align/1pfiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14695/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.718658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1othA
id: 1othA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1othA/nostruct-align/1othA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29937/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.080658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nstA
id: 1nstA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nstA/nostruct-align/1nstA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19734/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.614655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1p35A
id: 1p35A   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1p35A/nostruct-align/1p35A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22864/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.688660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pd21
id: 1pd21   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pd21/nostruct-align/1pd21.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26063/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.446655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1peh
id: 1peh   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1peh/nostruct-align/1peh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24203/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.919662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nubA
id: 1nubA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nubA/nostruct-align/1nubA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29220/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.241669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1otcA
id: 1otcA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1otcA/nostruct-align/1otcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21770/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.545670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pi2
id: 1pi2   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pi2/nostruct-align/1pi2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19659/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.760651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lci
id: 1lci   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lci/nostruct-align/1lci.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.561661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pdr
id: 1pdr   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pdr/nostruct-align/1pdr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27686/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.378662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ocrC
id: 1ocrC   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ocrC/nostruct-align/1ocrC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5255/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.703659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pnbA
id: 1pnbA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pnbA/nostruct-align/1pnbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10398/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.409668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ponB
id: 1ponB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ponB/nostruct-align/1ponB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30784/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.848663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1plq
id: 1plq   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1plq/nostruct-align/1plq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11056/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.112671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ppbL
id: 1ppbL   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ppbL/nostruct-align/1ppbL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.620667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ponA
id: 1ponA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1ponA/nostruct-align/1ponA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30151/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.548660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1preA
id: 1preA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1preA/nostruct-align/1preA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26274/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.339661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pfo
id: 1pfo   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pfo/nostruct-align/1pfo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19350/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.785660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poiB
id: 1poiB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1poiB/nostruct-align/1poiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12916/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.829666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pru
id: 1pru   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pru/nostruct-align/1pru.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30340/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.374664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pmaP
id: 1pmaP   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pmaP/nostruct-align/1pmaP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5597/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.158661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pmaA
id: 1pmaA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pmaA/nostruct-align/1pmaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4144/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.058670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pyaA
id: 1pyaA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pyaA/nostruct-align/1pyaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24586/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.007660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvl
id: 1pvl   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pvl/nostruct-align/1pvl.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19056/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pytA
id: 1pytA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pytA/nostruct-align/1pytA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16143/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.060669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1psm
id: 1psm   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1psm/nostruct-align/1psm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5781/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.771667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pyiA
id: 1pyiA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pyiA/nostruct-align/1pyiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23122/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.912674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvc4
id: 1pvc4   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pvc4/nostruct-align/1pvc4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8585/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.692657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qa9A
id: 1qa9A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qa9A/nostruct-align/1qa9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28445/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.187653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qa5A
id: 1qa5A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qa5A/nostruct-align/1qa5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16351/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.545654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pjr
id: 1pjr   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pjr/nostruct-align/1pjr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11038/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.475662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qa6A
id: 1qa6A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qa6A/nostruct-align/1qa6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32278/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.826675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qb2A
id: 1qb2A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qb2A/nostruct-align/1qb2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27120/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.541672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qauA
id: 1qauA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qauA/nostruct-align/1qauA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6614/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.257660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qa4A
id: 1qa4A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qa4A/nostruct-align/1qa4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16539/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.545654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qbeA
id: 1qbeA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qbeA/nostruct-align/1qbeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19865/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.747665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qaeA
id: 1qaeA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qaeA/nostruct-align/1qaeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25891/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.095657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qbhA
id: 1qbhA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qbhA/nostruct-align/1qbhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-851/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.840668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qadA
id: 1qadA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qadA/nostruct-align/1qadA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3686/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.154663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qc7A
id: 1qc7A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qc7A/nostruct-align/1qc7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3410/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.721664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qckA
id: 1qckA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qckA/nostruct-align/1qckA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20815/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.708664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qbjA
id: 1qbjA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qbjA/nostruct-align/1qbjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14523/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.666672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcrD
id: 1qcrD   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcrD/nostruct-align/1qcrD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5536/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.782669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qcsA
id: 1qcsA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qcsA/nostruct-align/1qcsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2044/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.901672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qczA
id: 1qczA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qczA/nostruct-align/1qczA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13359/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.957657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ordA
id: 1ordA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ordA/nostruct-align/1ordA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31949/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.774658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qbzC
id: 1qbzC   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qbzC/nostruct-align/1qbzC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23110/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.631653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qdbA
id: 1qdbA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qdbA/nostruct-align/1qdbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14270/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.924667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfdA
id: 1qfdA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfdA/nostruct-align/1qfdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21527/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.597672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qexA
id: 1qexA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qexA/nostruct-align/1qexA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25748/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.839661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qaxA
id: 1qaxA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qaxA/nostruct-align/1qaxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.401657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qd5A
id: 1qd5A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qd5A/nostruct-align/1qd5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19017/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.602661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qeyA
id: 1qeyA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qeyA/nostruct-align/1qeyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21359/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.136658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qdlB
id: 1qdlB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qdlB/nostruct-align/1qdlB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25476/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.244675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pmd
id: 1pmd   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pmd/nostruct-align/1pmd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22397/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.530670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfhA
id: 1qfhA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfhA/nostruct-align/1qfhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21915/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.612671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pedA
id: 1pedA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pedA/nostruct-align/1pedA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8953/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.245667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfjA
id: 1qfjA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfjA/nostruct-align/1qfjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24119/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.976669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgiA
id: 1qgiA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgiA/nostruct-align/1qgiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10802/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.681656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1phd
id: 1phd   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1phd/nostruct-align/1phd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.415665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfoA
id: 1qfoA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfoA/nostruct-align/1qfoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11073/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.640656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgoA
id: 1qgoA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgoA/nostruct-align/1qgoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.896667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qhkA
id: 1qhkA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qhkA/nostruct-align/1qhkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29441/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.642670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgkB
id: 1qgkB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgkB/nostruct-align/1qgkB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5599/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.258667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qhiA
id: 1qhiA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qhiA/nostruct-align/1qhiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12376/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.482666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qh5A
id: 1qh5A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qh5A/nostruct-align/1qh5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3988/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.897659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qdlA
id: 1qdlA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qdlA/nostruct-align/1qdlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10803/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qhaA
id: 1qhaA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qhaA/nostruct-align/1qhaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15540/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.938660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qg3A
id: 1qg3A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qg3A/nostruct-align/1qg3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18373/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.746658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qguB
id: 1qguB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qguB/nostruct-align/1qguB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32364/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.977676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pysB
id: 1pysB   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pysB/nostruct-align/1pysB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31661/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.309662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgtA
id: 1qgtA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgtA/nostruct-align/1qgtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23356/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.992661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qk7A
id: 1qk7A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qk7A/nostruct-align/1qk7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23633/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.808670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qj8A
id: 1qj8A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qj8A/nostruct-align/1qj8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29656/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.627655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qhvA
id: 1qhvA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qhvA/nostruct-align/1qhvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12166/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.770660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qkfA
id: 1qkfA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qkfA/nostruct-align/1qkfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2355/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.300659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qk9A
id: 1qk9A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qk9A/nostruct-align/1qk9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2188/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.625671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qk6A
id: 1qk6A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qk6A/nostruct-align/1qk6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16735/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.924667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qj4A
id: 1qj4A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qj4A/nostruct-align/1qj4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21619/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.599670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qhlA
id: 1qhlA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qhlA/nostruct-align/1qhlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10431/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.008667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qli
id: 1qli   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qli/nostruct-align/1qli.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20907/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.404663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qjkA
id: 1qjkA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qjkA/nostruct-align/1qjkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12559/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.722656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qklA
id: 1qklA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qklA/nostruct-align/1qklA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19041/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.320663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qk3A
id: 1qk3A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qk3A/nostruct-align/1qk3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2479/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.655655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qj2A
id: 1qj2A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qj2A/nostruct-align/1qj2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6192/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.703659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgrA
id: 1qgrA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgrA/nostruct-align/1qgrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26634/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.022659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qp6A
id: 1qp6A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qp6A/nostruct-align/1qp6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21104/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.967667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qpmA
id: 1qpmA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qpmA/nostruct-align/1qpmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18191/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.483658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qpxA
id: 1qpxA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qpxA/nostruct-align/1qpxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7829/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.702652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qjaA
id: 1qjaA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qjaA/nostruct-align/1qjaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25170/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.092667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qpoA
id: 1qpoA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qpoA/nostruct-align/1qpoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29476/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.049667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qhuA
id: 1qhuA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qhuA/nostruct-align/1qhuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27722/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.301666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlmA
id: 1qlmA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlmA/nostruct-align/1qlmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11910/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.139664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qq5A
id: 1qq5A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qq5A/nostruct-align/1qq5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12872/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.800659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qq2A
id: 1qq2A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qq2A/nostruct-align/1qq2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24786/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.818665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qq8A
id: 1qq8A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qq8A/nostruct-align/1qq8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23676/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.173660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qj2C
id: 1qj2C   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qj2C/nostruct-align/1qj2C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30114/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.463669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qpzA
id: 1qpzA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qpzA/nostruct-align/1qpzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21034/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.836655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qltA
id: 1qltA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qltA/nostruct-align/1qltA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25162/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.709656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qp8A
id: 1qp8A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qp8A/nostruct-align/1qp8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4765/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.831665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqrA
id: 1qqrA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqrA/nostruct-align/1qqrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31779/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqgA
id: 1qqgA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqgA/nostruct-align/1qqgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20717/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.027664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qr7A
id: 1qr7A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qr7A/nostruct-align/1qr7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2084/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.988663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qspA
id: 1qspA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qspA/nostruct-align/1qspA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4488/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.351654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqeA
id: 1qqeA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqeA/nostruct-align/1qqeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1260/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.690659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqhA
id: 1qqhA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqhA/nostruct-align/1qqhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28836/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.187668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qrjB
id: 1qrjB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qrjB/nostruct-align/1qrjB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7970/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.090668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1quqA
id: 1quqA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1quqA/nostruct-align/1quqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21787/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.418671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1quqB
id: 1quqB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1quqB/nostruct-align/1quqB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6993/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.760666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qrqA
id: 1qrqA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qrqA/nostruct-align/1qrqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4627/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.234665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1r2aA
id: 1r2aA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1r2aA/nostruct-align/1r2aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8465/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.116653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qr6A
id: 1qr6A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qr6A/nostruct-align/1qr6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25442/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.702667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qumA
id: 1qumA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qumA/nostruct-align/1qumA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.537674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1r2fA
id: 1r2fA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1r2fA/nostruct-align/1r2fA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12650/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.994659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qf6A
id: 1qf6A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qf6A/nostruct-align/1qf6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23634/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -13.729675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rcb
id: 1rcb   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rcb/nostruct-align/1rcb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15262/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.730667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1quuA
id: 1quuA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1quuA/nostruct-align/1quuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.699661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1poxA
id: 1poxA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1poxA/nostruct-align/1poxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1786/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.574661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qrrA
id: 1qrrA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qrrA/nostruct-align/1qrrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8709/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.242676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rboC
id: 1rboC   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rboC/nostruct-align/1rboC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30563/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.743668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qguA
id: 1qguA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qguA/nostruct-align/1qguA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3788/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.015656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qtrA
id: 1qtrA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qtrA/nostruct-align/1qtrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24318/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.682663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rhoA
id: 1rhoA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rhoA/nostruct-align/1rhoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11157/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.470673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qj2B
id: 1qj2B   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qj2B/nostruct-align/1qj2B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4878/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.860657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rl2A
id: 1rl2A   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rl2A/nostruct-align/1rl2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5752/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.853668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qr4B
id: 1qr4B   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qr4B/nostruct-align/1qr4B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22981/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.785660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ron
id: 1ron   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1ron/nostruct-align/1ron.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27462/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.748657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qs0B
id: 1qs0B   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qs0B/nostruct-align/1qs0B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1189/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.286652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rmvA
id: 1rmvA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rmvA/nostruct-align/1rmvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32483/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.625656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rdr
id: 1rdr   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rdr/nostruct-align/1rdr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16887/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.526672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rh2F
id: 1rh2F   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rh2F/nostruct-align/1rh2F.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24377/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.946671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qs0A
id: 1qs0A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qs0A/nostruct-align/1qs0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22146/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.447662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1reqB
id: 1reqB   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1reqB/nostruct-align/1reqB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10000/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.331650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qubA
id: 1qubA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qubA/nostruct-align/1qubA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qvbA
id: 1qvbA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qvbA/nostruct-align/1qvbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18234/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.695663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rvv1
id: 1rvv1   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rvv1/nostruct-align/1rvv1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16043/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rrpB
id: 1rrpB   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rrpB/nostruct-align/1rrpB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25757/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.933670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1reqA
id: 1reqA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1reqA/nostruct-align/1reqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19370/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.378662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rypD
id: 1rypD   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rypD/nostruct-align/1rypD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7013/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.310669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sayA
id: 1sayA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sayA/nostruct-align/1sayA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18155/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.305664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rypB
id: 1rypB   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rypB/nostruct-align/1rypB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9726/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.363663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qu2A
id: 1qu2A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qu2A/nostruct-align/1qu2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29187/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.886658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fmk
id: 1fmk   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fmk/nostruct-align/1fmk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4768/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.744675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rypC
id: 1rypC   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rypC/nostruct-align/1rypC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15736/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.371658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rtm1
id: 1rtm1   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rtm1/nostruct-align/1rtm1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18267/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1seiA
id: 1seiA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1seiA/nostruct-align/1seiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21900/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.935654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sfcA
id: 1sfcA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sfcA/nostruct-align/1sfcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14486/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.700653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sco
id: 1sco   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sco/nostruct-align/1sco.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.596664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rypE
id: 1rypE   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rypE/nostruct-align/1rypE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3348/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.497650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1shsA
id: 1shsA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1shsA/nostruct-align/1shsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26028/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.942657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sis
id: 1sis   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sis/nostruct-align/1sis.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3565/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.582672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sknP
id: 1sknP   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sknP/nostruct-align/1sknP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-263/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.899658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smtA
id: 1smtA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smtA/nostruct-align/1smtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27006/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.115662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1spf
id: 1spf   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1spf/nostruct-align/1spf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27323/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.458664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rlr
id: 1rlr   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rlr/nostruct-align/1rlr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30550/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.528671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sro
id: 1sro   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sro/nostruct-align/1sro.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27024/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.470657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sek
id: 1sek   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sek/nostruct-align/1sek.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23009/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.556656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sfcC
id: 1sfcC   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sfcC/nostruct-align/1sfcC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20814/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.810654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1swuA
id: 1swuA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1swuA/nostruct-align/1swuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7060/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.077667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tac
id: 1tac   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tac/nostruct-align/1tac.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.866653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1szt
id: 1szt   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1szt/nostruct-align/1szt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22389/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.819656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1snc
id: 1snc   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1snc/nostruct-align/1snc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.873672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tbrR
id: 1tbrR   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tbrR/nostruct-align/1tbrR.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29957/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.783661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tbgE
id: 1tbgE   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tbgE/nostruct-align/1tbgE.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1415/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.781662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tbaA
id: 1tbaA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tbaA/nostruct-align/1tbaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29493/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.357666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1smlA
id: 1smlA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1smlA/nostruct-align/1smlA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3049/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.412659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1srrA
id: 1srrA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1srrA/nostruct-align/1srrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-976/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.763672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1skf
id: 1skf   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1skf/nostruct-align/1skf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.736664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1taxA
id: 1taxA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1taxA/nostruct-align/1taxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13132/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.988663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qbkB
id: 1qbkB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qbkB/nostruct-align/1qbkB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9121/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.536652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1quvA
id: 1quvA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1quvA/nostruct-align/1quvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14714/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.033661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tmf4
id: 1tmf4   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tmf4/nostruct-align/1tmf4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.346664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tc1A
id: 1tc1A   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tc1A/nostruct-align/1tc1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5256/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.412659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tiiC
id: 1tiiC   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tiiC/nostruct-align/1tiiC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19220/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.921661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tuc
id: 1tuc   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tuc/nostruct-align/1tuc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20149/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -34.349663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tocR
id: 1tocR   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tocR/nostruct-align/1tocR.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22317/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.418671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tvt
id: 1tvt   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tvt/nostruct-align/1tvt.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28983/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.623657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tvs
id: 1tvs   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tvs/nostruct-align/1tvs.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14299/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.623657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1u2fA
id: 1u2fA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1u2fA/nostruct-align/1u2fA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12752/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.524658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tud
id: 1tud   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tud/nostruct-align/1tud.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5588/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -33.413673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uba
id: 1uba   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uba/nostruct-align/1uba.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uba/nostruct-align/1uba.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uba/nostruct-align/1uba.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5457/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.633667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1txb
id: 1txb   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1txb/nostruct-align/1txb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-955/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.160660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1umuA
id: 1umuA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1umuA/nostruct-align/1umuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29761/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.589661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tpg
id: 1tpg   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tpg/nostruct-align/1tpg.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30234/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.550659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sw6A
id: 1sw6A   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sw6A/nostruct-align/1sw6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29975/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.287659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ulo
id: 1ulo   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ulo/nostruct-align/1ulo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17518/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.678665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tfa
id: 1tfa   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tfa/nostruct-align/1tfa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tfa/nostruct-align/1tfa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tfa/nostruct-align/1tfa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7462/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.933670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sesA
id: 1sesA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sesA/nostruct-align/1sesA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30043/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.099655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1theB
id: 1theB   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1theB/nostruct-align/1theB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17700/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.749664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1taq
id: 1taq   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1taq/nostruct-align/1taq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29111/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.805664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uby
id: 1uby   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uby/nostruct-align/1uby.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27188/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.100662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tdj
id: 1tdj   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tdj/nostruct-align/1tdj.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20560/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.643661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tubA
id: 1tubA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tubA/nostruct-align/1tubA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24688/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.084671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1t7pA
id: 1t7pA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1t7pA/nostruct-align/1t7pA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15848/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vsrA
id: 1vsrA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vsrA/nostruct-align/1vsrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30969/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.957657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vpfA
id: 1vpfA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vpfA/nostruct-align/1vpfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26230/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.896667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vib
id: 1vib   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vib/nostruct-align/1vib.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13666/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.955658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vpu
id: 1vpu   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vpu/nostruct-align/1vpu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15648/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.960663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vii
id: 1vii   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vii/nostruct-align/1vii.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23340/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.010666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vpc
id: 1vpc   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vpc/nostruct-align/1vpc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14341/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.947662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wgjA
id: 1wgjA   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wgjA/nostruct-align/1wgjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9792/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.262665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uxc
id: 1uxc   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uxc/nostruct-align/1uxc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5092/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.929657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vdeA
id: 1vdeA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vdeA/nostruct-align/1vdeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26732/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.059662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vdrA
id: 1vdrA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vdrA/nostruct-align/1vdrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.068649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xdtR
id: 1xdtR   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xdtR/nostruct-align/1xdtR.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16045/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1uteA
id: 1uteA   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1uteA/nostruct-align/1uteA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28514/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.924652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xbd
id: 1xbd   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xbd/nostruct-align/1xbd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12661/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.207657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ytfB
id: 1ytfB   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1ytfB/nostruct-align/1ytfB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28930/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.398651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tbgA
id: 1tbgA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tbgA/nostruct-align/1tbgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26706/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.806671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1wod
id: 1wod   alignment found: /projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1w/1wod/nostruct-align/1wod.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2450/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.609665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xsm
id: 1xsm   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xsm/nostruct-align/1xsm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19873/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.688675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yer
id: 1yer   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yer/nostruct-align/1yer.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13087/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.704666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1x11A
id: 1x11A   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1x11A/nostruct-align/1x11A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12223/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.818665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yua
id: 1yua   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yua/nostruct-align/1yua.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27231/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.288651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xpa
id: 1xpa   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xpa/nostruct-align/1xpa.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-804/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.911667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yuiA
id: 1yuiA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yuiA/nostruct-align/1yuiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31818/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.239670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yagA
id: 1yagA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yagA/nostruct-align/1yagA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16006/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.889664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2a3dA
id: 2a3dA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2a3dA/nostruct-align/2a3dA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16968/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.174667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zto
id: 1zto   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zto/nostruct-align/1zto.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.409668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bosA
id: 2bosA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bosA/nostruct-align/2bosA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17435/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.192657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tf6A
id: 1tf6A   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tf6A/nostruct-align/1tf6A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17750/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.399658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zfd
id: 1zfd   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zfd/nostruct-align/1zfd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2320/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.609665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2af8
id: 2af8   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2af8/nostruct-align/2af8.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18285/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.582657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2afp
id: 2afp   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2afp/nostruct-align/2afp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2afp/nostruct-align/2afp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2afp/nostruct-align/2afp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15487/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.692657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zeiA
id: 1zeiA   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zeiA/nostruct-align/1zeiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19054/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.889664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cps
id: 2cps   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cps/nostruct-align/2cps.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4013/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.667664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cpb
id: 2cpb   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cpb/nostruct-align/2cpb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28476/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.667664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zmeC
id: 1zmeC   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zmeC/nostruct-align/1zmeC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28753/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.338669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cblA
id: 2cblA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cblA/nostruct-align/2cblA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2008/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.022659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bpa3
id: 2bpa3   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bpa3/nostruct-align/2bpa3.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17286/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.230667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2eboA
id: 2eboA   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2eboA/nostruct-align/2eboA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7475/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.241669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cbh
id: 2cbh   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cbh/nostruct-align/2cbh.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26513/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.753662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ezk
id: 2ezk   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ezk/nostruct-align/2ezk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21855/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.368668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xvaA
id: 1xvaA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xvaA/nostruct-align/1xvaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26739/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.142670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1zymA
id: 1zymA   alignment found: /projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1z/1zymA/nostruct-align/1zymA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15551/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.080658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dgcA
id: 2dgcA   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dgcA/nostruct-align/2dgcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30252/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.209656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ezh
id: 2ezh   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2ezh/nostruct-align/2ezh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32200/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.800659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2admA
id: 2admA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2admA/nostruct-align/2admA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27789/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.852676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2btvA
id: 2btvA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2btvA/nostruct-align/2btvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17710/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.787659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fmr
id: 2fmr   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fmr/nostruct-align/2fmr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11141/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.141678
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fokA
id: 2fokA   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fokA/nostruct-align/2fokA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.486664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fnb
id: 2fnb   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fnb/nostruct-align/2fnb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fnb/nostruct-align/2fnb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fnb/nostruct-align/2fnb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14969/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.256668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fua
id: 2fua   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fua/nostruct-align/2fua.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5882/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.581665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gcc
id: 2gcc   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gcc/nostruct-align/2gcc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31330/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.052673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2aop
id: 2aop   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2aop/nostruct-align/2aop.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6395/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.812653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gp8A
id: 2gp8A   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gp8A/nostruct-align/2gp8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-alpha-29393/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.706665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gmfA
id: 2gmfA   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gmfA/nostruct-align/2gmfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12848/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.161667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2adr
id: 2adr   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2adr/nostruct-align/2adr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9730/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.084671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2frvA
id: 2frvA   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2frvA/nostruct-align/2frvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7001/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2irfG
id: 2irfG   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2irfG/nostruct-align/2irfG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11863/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.824661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2jhbA
id: 2jhbA   alignment found: /projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2j/2jhbA/nostruct-align/2jhbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4129/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.951660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fal
id: 2fal   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fal/nostruct-align/2fal.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5285/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.439667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dln
id: 2dln   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dln/nostruct-align/2dln.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5749/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.397659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2if1
id: 2if1   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2if1/nostruct-align/2if1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26736/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.753662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hdhA
id: 2hdhA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hdhA/nostruct-align/2hdhA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11817/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.867661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2frvB
id: 2frvB   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2frvB/nostruct-align/2frvB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13355/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.903656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mrb
id: 2mrb   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mrb/nostruct-align/2mrb.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10170/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.108658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2leu
id: 2leu   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2leu/nostruct-align/2leu.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22320/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.383667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2mbr
id: 2mbr   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2mbr/nostruct-align/2mbr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5487/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.566666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gf1
id: 2gf1   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gf1/nostruct-align/2gf1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20766/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.245667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cas
id: 2cas   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cas/nostruct-align/2cas.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22743/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.315659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occJ
id: 2occJ   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occJ/nostruct-align/2occJ.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28600/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.550659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occI
id: 2occI   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occI/nostruct-align/2occI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12405/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.789658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occG
id: 2occG   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occG/nostruct-align/2occG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2028/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.367676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ncm
id: 2ncm   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2ncm/nostruct-align/2ncm.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20923/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.818665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nlrA
id: 2nlrA   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2nlrA/nostruct-align/2nlrA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9953/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.615662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2hgsA
id: 2hgsA   alignment found: /projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2h/2hgsA/nostruct-align/2hgsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27051/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.861664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pde
id: 2pde   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pde/nostruct-align/2pde.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26655/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.454666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2prgC
id: 2prgC   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2prgC/nostruct-align/2prgC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19685/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.818665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2myo
id: 2myo   alignment found: /projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2m/2myo/nostruct-align/2myo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2272/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.196655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nllB
id: 2nllB   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2nllB/nostruct-align/2nllB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32644/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.058655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occM
id: 2occM   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occM/nostruct-align/2occM.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7444/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pta
id: 2pta   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pta/nostruct-align/2pta.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11257/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.407669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2occB
id: 2occB   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2occB/nostruct-align/2occB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30124/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.202667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gsaA
id: 2gsaA   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gsaA/nostruct-align/2gsaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13973/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ovo
id: 2ovo   alignment found: /projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2o/2ovo/nostruct-align/2ovo.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17970/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.189667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sivB
id: 2sivB   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sivB/nostruct-align/2sivB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14677/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.162659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sivA
id: 2sivA   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sivA/nostruct-align/2sivA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6592/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.496658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2nadA
id: 2nadA   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2nadA/nostruct-align/2nadA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29075/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.502670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2gliA
id: 2gliA   alignment found: /projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2g/2gliA/nostruct-align/2gliA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.344650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2scuB
id: 2scuB   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2scuB/nostruct-align/2scuB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29890/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.560669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pkaA
id: 2pkaA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pkaA/nostruct-align/2pkaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19752/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.804672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cau
id: 2cau   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cau/nostruct-align/2cau.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cau/nostruct-align/2cau.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cau/nostruct-align/2cau.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1533/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.127655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2tnfA
id: 2tnfA   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2tnfA/nostruct-align/2tnfA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2138/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.234665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pgi
id: 2pgi   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pgi/nostruct-align/2pgi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27089/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.144653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2scuA
id: 2scuA   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2scuA/nostruct-align/2scuA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31306/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.345657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2u2fA
id: 2u2fA   alignment found: /projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2u/2u2fA/nostruct-align/2u2fA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.182663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1skyB
id: 1skyB   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1skyB/nostruct-align/1skyB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5511/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.878662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2u1a
id: 2u1a   alignment found: /projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2u/2u1a/nostruct-align/2u1a.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.238663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ts1
id: 2ts1   alignment found: /projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2t/2ts1/nostruct-align/2ts1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7145/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.075668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rspB
id: 2rspB   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rspB/nostruct-align/2rspB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.727661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3dni
id: 3dni   alignment found: /projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3d/3dni/nostruct-align/3dni.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1149/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.786667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3eugA
id: 3eugA   alignment found: /projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3e/3eugA/nostruct-align/3eugA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17228/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.244659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2xat
id: 2xat   alignment found: /projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2x/2xat/nostruct-align/2xat.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14857/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.516663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3eipA
id: 3eipA   alignment found: /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3e/3eipA/nostruct-align/3eipA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18810/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.686661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3fib
id: 3fib   alignment found: /projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3f/3fib/nostruct-align/3fib.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26287/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.594650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3mag
id: 3mag   alignment found: /projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3m/3mag/nostruct-align/3mag.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9352/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.089661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pchM
id: 3pchM   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pchM/nostruct-align/3pchM.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23316/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.361664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2vsgA
id: 2vsgA   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2vsgA/nostruct-align/2vsgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24245/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.100662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pchA
id: 3pchA   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pchA/nostruct-align/3pchA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26413/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.413651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2vil
id: 2vil   alignment found: /projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2v/2vil/nostruct-align/2vil.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-311/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.863663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3proC
id: 3proC   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3proC/nostruct-align/3proC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21493/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.177658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ssi
id: 3ssi   alignment found: /projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3s/3ssi/nostruct-align/3ssi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23839/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.702667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2reb
id: 2reb   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2reb/nostruct-align/2reb.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17017/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.682663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ncmA
id: 3ncmA   alignment found: /projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3n/3ncmA/nostruct-align/3ncmA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7930/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.565659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3tgf
id: 3tgf   alignment found: /projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3t/3tgf/nostruct-align/3tgf.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-610/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.869675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3stdA
id: 3stdA   alignment found: /projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3s/3stdA/nostruct-align/3stdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8443/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.213654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3erdA
id: 3erdA   alignment found: /projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3e/3erdA/nostruct-align/3erdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30061/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.765671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lbd
id: 2lbd   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lbd/nostruct-align/2lbd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12764/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.672668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4gatA
id: 4gatA   alignment found: /projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4g/4gatA/nostruct-align/4gatA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14896/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.500656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3mdeA
id: 3mdeA   alignment found: /projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3m/3mdeA/nostruct-align/3mdeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11778/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.197662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4hb1
id: 4hb1   alignment found: /projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4h/4hb1/nostruct-align/4hb1.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9049/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.255661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4crxA
id: 4crxA   alignment found: /projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4c/4crxA/nostruct-align/4crxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13911/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.952667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3tmkA
id: 3tmkA   alignment found: /projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3t/3tmkA/nostruct-align/3tmkA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6177/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.954666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2rmpA
id: 2rmpA   alignment found: /projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2r/2rmpA/nostruct-align/2rmpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7333/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3thi
id: 3thi   alignment found: /projects/compbio/experiments/models.97/pdb/3t/3thi/nostruct-align/3thi.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3t/3thi/nostruct-align/3thi.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3t/3thi/nostruct-align/3thi.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.269653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pmgA
id: 3pmgA   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pmgA/nostruct-align/3pmgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28784/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.063660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6prcH
id: 6prcH   alignment found: /projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6p/6prcH/nostruct-align/6prcH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13865/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.905670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7apiB
id: 7apiB   alignment found: /projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7a/7apiB/nostruct-align/7apiB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15403/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.544662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6paxA
id: 6paxA   alignment found: /projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6p/6paxA/nostruct-align/6paxA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22036/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.734665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8atcB
id: 8atcB   alignment found: /projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8a/8atcB/nostruct-align/8atcB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24368/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.771667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4rhv4
id: 4rhv4   alignment found: /projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4r/4rhv4/nostruct-align/4rhv4.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7535/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.046661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5tmp
id: 5tmp   alignment found: /projects/compbio/experiments/models.97/pdb/5t/5tmp/nostruct-align/5tmp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5t/5tmp/nostruct-align/5tmp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5t/5tmp/nostruct-align/5tmp.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22814/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.103668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pfk
id: 3pfk   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pfk/nostruct-align/3pfk.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17771/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.712662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4kbpA
id: 4kbpA   alignment found: /projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4k/4kbpA/nostruct-align/4kbpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30648/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.344666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7odcA
id: 7odcA   alignment found: /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7o/7odcA/nostruct-align/7odcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14453/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.010666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4pah
id: 4pah   alignment found: /projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4p/4pah/nostruct-align/4pah.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4076/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.688660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6prcM
id: 6prcM   alignment found: /projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6p/6prcM/nostruct-align/6prcM.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22971/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.443665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2prgA
id: 2prgA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2prgA/nostruct-align/2prgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12001/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.181656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5eat
id: 5eat   alignment found: /projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5e/5eat/nostruct-align/5eat.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29099/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.950668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2yhx
id: 2yhx   alignment found: /projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2y/2yhx/nostruct-align/2yhx.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18983/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.281662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4mbp
id: 4mbp   alignment found: /projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4m/4mbp/nostruct-align/4mbp.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4528/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.723663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ldh
id: 3ldh   alignment found: /projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3l/3ldh/nostruct-align/3ldh.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6247/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -12.740662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2napA
id: 2napA   alignment found: /projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2n/2napA/nostruct-align/2napA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13367/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.476669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tgoA
id: 1tgoA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tgoA/nostruct-align/1tgoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29192/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.625656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3bct
id: 3bct   alignment found: /projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3b/3bct/nostruct-align/3bct.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25595/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.217667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6prcL
id: 6prcL   alignment found: /projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6p/6prcL/nostruct-align/6prcL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7305/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.898666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8kme2
id: 8kme2   alignment found: /projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8k/8kme2/nostruct-align/8kme2.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29094/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.264664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 8fabA
id: 8fabA   alignment found: /projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/8f/8fabA/nostruct-align/8fabA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21317/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.022659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tkiA
id: 1tkiA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tkiA/nostruct-align/1tkiA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8433/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hvc
id: 1hvc   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hvc/nostruct-align/1hvc.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30998/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.439667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 19hcA
id: 19hcA   alignment found: /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/19/19hcA/nostruct-align/19hcA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21592/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.744659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1awe
id: 1awe   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1awe/nostruct-align/1awe.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16131/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.896667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b2iA
id: 1b2iA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b2iA/nostruct-align/1b2iA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23654/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.664658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b12A
id: 1b12A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b12A/nostruct-align/1b12A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28642/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.111664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3qA
id: 1b3qA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3qA/nostruct-align/1b3qA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25403/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.023666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b16A
id: 1b16A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b16A/nostruct-align/1b16A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11649/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b6rA
id: 1b6rA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b6rA/nostruct-align/1b6rA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11498/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.154663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9hA
id: 1b9hA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9hA/nostruct-align/1b9hA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9126/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.718658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b0uA
id: 1b0uA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b0uA/nostruct-align/1b0uA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17844/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.753662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8sA
id: 1b8sA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8sA/nostruct-align/1b8sA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12511/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.637665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bjnA
id: 1bjnA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bjnA/nostruct-align/1bjnA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26422/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.532669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bpwA
id: 1bpwA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bpwA/nostruct-align/1bpwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13119/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.488663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c2aA
id: 1c2aA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c2aA/nostruct-align/1c2aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20035/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.885666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c17M
id: 1c17M   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c17M/nostruct-align/1c17M.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19730/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.221664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3qA
id: 1c3qA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3qA/nostruct-align/1c3qA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27182/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.208664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c4zA
id: 1c4zA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c4zA/nostruct-align/1c4zA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20381/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.708664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cc8A
id: 1cc8A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cc8A/nostruct-align/1cc8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29328/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.289658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c0aA
id: 1c0aA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c0aA/nostruct-align/1c0aA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1110/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.104660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ce0A
id: 1ce0A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ce0A/nostruct-align/1ce0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5605/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.372665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vrkB
id: 1vrkB   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vrkB/nostruct-align/1vrkB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.843674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgwX
id: 1dgwX   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgwX/nostruct-align/1dgwX.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9218/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.019669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgwY
id: 1dgwY   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgwY/nostruct-align/1dgwY.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30131/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.778656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4eA
id: 1b4eA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4eA/nostruct-align/1b4eA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5909/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.769653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dg9A
id: 1dg9A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dg9A/nostruct-align/1dg9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28826/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.001663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cq3A
id: 1cq3A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cq3A/nostruct-align/1cq3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6918/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.039673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cg5B
id: 1cg5B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cg5B/nostruct-align/1cg5B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27627/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.339676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cm5A
id: 1cm5A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cm5A/nostruct-align/1cm5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24430/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.650665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ct9A
id: 1ct9A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ct9A/nostruct-align/1ct9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15376/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.155670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cvjB
id: 1cvjB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cvjB/nostruct-align/1cvjB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.883667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cxwA
id: 1cxwA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cxwA/nostruct-align/1cxwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27852/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2zA
id: 1d2zA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2zA/nostruct-align/1d2zA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10478/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.254669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2zB
id: 1d2zB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2zB/nostruct-align/1d2zB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3650/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.600662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ctqA
id: 1ctqA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ctqA/nostruct-align/1ctqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11776/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.234665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d0vA
id: 1d0vA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d0vA/nostruct-align/1d0vA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30056/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.852676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d6gA
id: 1d6gA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d6gA/nostruct-align/1d6gA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18934/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.297668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d3vA
id: 1d3vA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d3vA/nostruct-align/1d3vA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.778671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cs0B
id: 1cs0B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cs0B/nostruct-align/1cs0B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5289/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.991653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cztA
id: 1cztA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cztA/nostruct-align/1cztA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7850/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.670670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d1dA
id: 1d1dA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d1dA/nostruct-align/1d1dA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30604/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.712662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dbwA
id: 1dbwA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dbwA/nostruct-align/1dbwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20682/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.817673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dabA
id: 1dabA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dabA/nostruct-align/1dabA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1167/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.107666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgrV
id: 1dgrV   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgrV/nostruct-align/1dgrV.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-purr-4993/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.017670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dfeA
id: 1dfeA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dfeA/nostruct-align/1dfeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23569/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.909653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgwA
id: 1dgwA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgwA/nostruct-align/1dgwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-927/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.309662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dfuP
id: 1dfuP   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dfuP/nostruct-align/1dfuP.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8077/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.709656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1diiC
id: 1diiC   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1diiC/nostruct-align/1diiC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5104/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.539658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1di2A
id: 1di2A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1di2A/nostruct-align/1di2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5821/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.911667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dfsA
id: 1dfsA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dfsA/nostruct-align/1dfsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7227/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.115662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cr6B
id: 1cr6B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cr6B/nostruct-align/1cr6B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16293/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.643661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1db3A
id: 1db3A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1db3A/nostruct-align/1db3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28295/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.387665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1df4A
id: 1df4A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1df4A/nostruct-align/1df4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14840/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.759674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cxyA
id: 1cxyA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cxyA/nostruct-align/1cxyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28806/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.671661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1f58P
id: 1f58P   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1f58P/nostruct-align/1f58P.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1f58P/nostruct-align/1f58P.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1f58P/nostruct-align/1f58P.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3014/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -4.699661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qf5A
id: 1qf5A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qf5A/nostruct-align/1qf5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15188/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.381668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qd9A
id: 1qd9A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qd9A/nostruct-align/1qd9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17658/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.660660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1budA
id: 1budA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1budA/nostruct-align/1budA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8180/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.721664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cpgA
id: 2cpgA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cpgA/nostruct-align/2cpgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28209/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.163666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qt9A
id: 1qt9A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qt9A/nostruct-align/1qt9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22603/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.457657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dd8A
id: 1dd8A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dd8A/nostruct-align/1dd8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13130/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.878662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3lH
id: 1a3lH   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3lH/nostruct-align/1a3lH.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.115662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yagG
id: 1yagG   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yagG/nostruct-align/1yagG.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16166/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.724670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a3lL
id: 1a3lL   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a3lL/nostruct-align/1a3lL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30026/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.012665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qipA
id: 1qipA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qipA/nostruct-align/1qipA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6779/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.547668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ughI
id: 1ughI   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1ughI/nostruct-align/1ughI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31490/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.910660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qh3A
id: 1qh3A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qh3A/nostruct-align/1qh3A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14873/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.164673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qu9A
id: 1qu9A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qu9A/nostruct-align/1qu9A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26964/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ex1A
id: 1ex1A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ex1A/nostruct-align/1ex1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24094/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.483673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dbgA
id: 1dbgA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dbgA/nostruct-align/1dbgA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7413/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.918655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qh4A
id: 1qh4A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qh4A/nostruct-align/1qh4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10784/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.095657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxaA
id: 1bxaA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxaA/nostruct-align/1bxaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10438/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.948669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1louA
id: 1louA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1louA/nostruct-align/1louA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27646/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.098663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3jA
id: 1c3jA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3jA/nostruct-align/1c3jA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32392/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.628662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cor
id: 1cor   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cor/nostruct-align/1cor.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-637/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.592667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bn8A
id: 1bn8A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bn8A/nostruct-align/1bn8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6765/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.572662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bza
id: 1bza   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bza/nostruct-align/1bza.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17884/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.748657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qh8A
id: 1qh8A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qh8A/nostruct-align/1qh8A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3863/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.865662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qh8B
id: 1qh8B   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qh8B/nostruct-align/1qh8B.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18647/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.666656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxeA
id: 1bxeA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxeA/nostruct-align/1bxeA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10932/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.803665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3mA
id: 1c3mA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3mA/nostruct-align/1c3mA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1999/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.609665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qk4A
id: 1qk4A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qk4A/nostruct-align/1qk4A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17034/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.739655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qmpA
id: 1qmpA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qmpA/nostruct-align/1qmpA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25241/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.284668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qjwA
id: 1qjwA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qjwA/nostruct-align/1qjwA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30979/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.772659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d9bA
id: 1d9bA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d9bA/nostruct-align/1d9bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d9bA/nostruct-align/1d9bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d9bA/nostruct-align/1d9bA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28858/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.858658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cs1A
id: 1cs1A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cs1A/nostruct-align/1cs1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5073/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.203659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c24A
id: 1c24A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c24A/nostruct-align/1c24A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17903/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.311661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b5qA
id: 1b5qA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b5qA/nostruct-align/1b5qA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5425/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.713669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rpjA
id: 1rpjA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rpjA/nostruct-align/1rpjA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23526/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.090652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ldtL
id: 1ldtL   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1ldtL/nostruct-align/1ldtL.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27867/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.896667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bc2A
id: 2bc2A   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bc2A/nostruct-align/2bc2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10927/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.109665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3rabA
id: 3rabA   alignment found: /projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3r/3rabA/nostruct-align/3rabA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20522/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.119659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ae2A
id: 2ae2A   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2ae2A/nostruct-align/2ae2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19797/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.743668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7fd1A
id: 7fd1A   alignment found: /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7f/7fd1A/nostruct-align/7fd1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17438/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.455658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pvbA
id: 2pvbA   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pvbA/nostruct-align/2pvbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7146/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.642670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bvqA
id: 1bvqA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bvqA/nostruct-align/1bvqA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20774/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.337677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4vA
id: 1b4vA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4vA/nostruct-align/1b4vA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15770/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.067673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1l58
id: 1l58   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1l58/nostruct-align/1l58.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8841/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.241653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cqyA
id: 1cqyA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cqyA/nostruct-align/1cqyA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14160/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.758652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgvA
id: 1qgvA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgvA/nostruct-align/1qgvA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10635/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.257675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgbA
id: 1qgbA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgbA/nostruct-align/1qgbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9529/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.798660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlaC
id: 1qlaC   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlaC/nostruct-align/1qlaC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7423/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.261658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qo0D
id: 1qo0D   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qo0D/nostruct-align/1qo0D.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9254/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.098663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlaB
id: 1qlaB   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlaB/nostruct-align/1qlaB.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19591/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.322662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxoA
id: 1bxoA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxoA/nostruct-align/1bxoA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24734/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.836655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tl2A
id: 1tl2A   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tl2A/nostruct-align/1tl2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12352/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.613663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qs2A
id: 1qs2A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qs2A/nostruct-align/1qs2A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2371/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.179672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1r1bA
id: 1r1bA   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1r1bA/nostruct-align/1r1bA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30796/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.409668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlaA
id: 1qlaA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlaA/nostruct-align/1qlaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11719/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qvaA
id: 1qvaA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qvaA/nostruct-align/1qvaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7842/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.858658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qu0A
id: 1qu0A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qu0A/nostruct-align/1qu0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-918/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.826660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9oA
id: 1b9oA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9oA/nostruct-align/1b9oA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27252/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.554657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qs1A
id: 1qs1A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qs1A/nostruct-align/1qs1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.016663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1icfI
id: 1icfI   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1icfI/nostruct-align/1icfI.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32329/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.099670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qjdA
id: 1qjdA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qjdA/nostruct-align/1qjdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17578/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.715668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d7oA
id: 1d7oA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d7oA/nostruct-align/1d7oA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7849/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.255676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hfeL
id: 1hfeL   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hfeL/nostruct-align/1hfeL.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30871/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -13.101654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tmzA
id: 1tmzA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tmzA/nostruct-align/1tmzA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25239/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.524658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5ukdA
id: 5ukdA   alignment found: /projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5u/5ukdA/nostruct-align/5ukdA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18451/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.899658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mgtA
id: 1mgtA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mgtA/nostruct-align/1mgtA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2941/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.310654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b1cA
id: 1b1cA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b1cA/nostruct-align/1b1cA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.571671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1akr
id: 1akr   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1akr/nostruct-align/1akr.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12514/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.769653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cg5A
id: 1cg5A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cg5A/nostruct-align/1cg5A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18448/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.359665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qd1A
id: 1qd1A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qd1A/nostruct-align/1qd1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12306/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.974655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1alq
id: 1alq   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1alq/nostruct-align/1alq.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23374/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.673660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qq7A
id: 1qq7A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qq7A/nostruct-align/1qq7A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9985/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.783661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cz1A
id: 1cz1A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cz1A/nostruct-align/1cz1A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12171/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tia
id: 1tia   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tia/nostruct-align/1tia.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file ./tmp/tmp-build-weighted-model-purr-5011/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.406662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d7uA
id: 1d7uA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d7uA/nostruct-align/1d7uA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7920/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.894669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bolA
id: 1bolA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bolA/nostruct-align/1bolA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20927/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.122665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pvaA
id: 3pvaA   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pvaA/nostruct-align/3pvaA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23482/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.428665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1czsA
id: 1czsA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1czsA/nostruct-align/1czsA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10593/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.670670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qusA
id: 1qusA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qusA/nostruct-align/1qusA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15806/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.876663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b04A
id: 1b04A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b04A/nostruct-align/1b04A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2880/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.411652
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b22A
id: 1b22A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b22A/nostruct-align/1b22A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10572/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ce9C
id: 1ce9C   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ce9C/nostruct-align/1ce9C.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4846/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.566666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c8zA
id: 1c8zA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c8zA/nostruct-align/1c8zA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16451/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.539673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d8iA
id: 1d8iA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d8iA/nostruct-align/1d8iA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31426/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.042664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qupA
id: 1qupA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qupA/nostruct-align/1qupA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9733/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.016663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qleD
id: 1qleD   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qleD/nostruct-align/1qleD.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17460/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.411667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bqbA
id: 1bqbA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bqbA/nostruct-align/1bqbA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24020/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.640671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bt0A
id: 1bt0A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bt0A/nostruct-align/1bt0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5132/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.475662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dguA
id: 1dguA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dguA/nostruct-align/1dguA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5774/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.742661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qr0A
id: 1qr0A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qr0A/nostruct-align/1qr0A.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16947/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.710663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fnd
id: 1fnd   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fnd/nostruct-align/1fnd.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16778/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.550659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b0yA
id: 1b0yA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b0yA/nostruct-align/1b0yA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6264/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.330658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b33N
id: 1b33N   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b33N/nostruct-align/1b33N.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17977/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.026672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgrC
id: 1dgrC   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgrC/nostruct-align/1dgrC.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.327667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgrM
id: 1dgrM   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgrM/nostruct-align/1dgrM.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9098/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.778656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgrN
id: 1dgrN   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgrN/nostruct-align/1dgrN.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27184/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.019669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgrW
id: 1dgrW   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgrW/nostruct-align/1dgrW.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9224/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.851654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nftA
id: 1nftA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nftA/nostruct-align/1nftA.t99-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25098/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.037659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1igs
id: 1igs   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1igs/nostruct-align/1igs.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20208/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.992661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oatA
id: 1oatA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oatA/nostruct-align/1oatA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27148/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.140656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1scuA
id: 1scuA   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1scuA/nostruct-align/1scuA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9493/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.353668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1tdtA
id: 1tdtA   alignment found: /projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1t/1tdtA/nostruct-align/1tdtA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17802/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.007660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1vhiA
id: 1vhiA   alignment found: /projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1v/1vhiA/nostruct-align/1vhiA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.908661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1amtA
id: 1amtA   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1amtA/nostruct-align/1amtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1amtA/nostruct-align/1amtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1amtA/nostruct-align/1amtA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23943/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.486664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1aikN
id: 1aikN   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1aikN/nostruct-align/1aikN.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.503662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b10A
id: 1b10A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b10A/nostruct-align/1b10A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8132/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.805664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a6l
id: 1a6l   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a6l/nostruct-align/1a6l.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15406/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.479660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b0b
id: 1b0b   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b0b/nostruct-align/1b0b.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29512/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.470657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b34B
id: 1b34B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b34B/nostruct-align/1b34B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26369/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.317673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b4rA
id: 1b4rA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b4rA/nostruct-align/1b4rA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1280/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.669662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b67A
id: 1b67A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b67A/nostruct-align/1b67A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12492/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.741669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1as8A
id: 1as8A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1as8A/nostruct-align/1as8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23131/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.002655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b6tA
id: 1b6tA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b6tA/nostruct-align/1b6tA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14938/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.100662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b71A
id: 1b71A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b71A/nostruct-align/1b71A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18901/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.730667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b73A
id: 1b73A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b73A/nostruct-align/1b73A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10498/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.600662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a1yE
id: 1a1yE   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a1yE/nostruct-align/1a1yE.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a1yE/nostruct-align/1a1yE.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a1yE/nostruct-align/1a1yE.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17300/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.999664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b78A
id: 1b78A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b78A/nostruct-align/1b78A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13766/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.648666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b74A
id: 1b74A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b74A/nostruct-align/1b74A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16870/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.600662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1a75A
id: 1a75A   alignment found: /projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1a/1a75A/nostruct-align/1a75A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32597/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.673660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9mA
id: 1b9mA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9mA/nostruct-align/1b9mA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11162/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.312653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b7bA
id: 1b7bA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b7bA/nostruct-align/1b7bA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22764/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.879654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1benA
id: 1benA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1benA/nostruct-align/1benA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -4.748657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b91A
id: 1b91A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b91A/nostruct-align/1b91A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1103/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.415649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bm4A
id: 1bm4A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bm4A/nostruct-align/1bm4A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3083/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.831665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b9lA
id: 1b9lA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b9lA/nostruct-align/1b9lA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31815/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.043655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bnxA
id: 1bnxA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bnxA/nostruct-align/1bnxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5183/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.668671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b8gA
id: 1b8gA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b8gA/nostruct-align/1b8gA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15866/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.059662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1boeA
id: 1boeA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1boeA/nostruct-align/1boeA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7799/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.372650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bo9A
id: 1bo9A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bo9A/nostruct-align/1bo9A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6275/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.967667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b6a
id: 1b6a   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b6a/nostruct-align/1b6a.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.642654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1br0A
id: 1br0A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1br0A/nostruct-align/1br0A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1417/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.011658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bn6A
id: 1bn6A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bn6A/nostruct-align/1bn6A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29416/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.513672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1booA
id: 1booA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1booA/nostruct-align/1booA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5750/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.103668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b3mA
id: 1b3mA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b3mA/nostruct-align/1b3mA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b3mA/nostruct-align/1b3mA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b3mA/nostruct-align/1b3mA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30858/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.613663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bsjA
id: 1bsjA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bsjA/nostruct-align/1bsjA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4511/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.045654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw6A
id: 1bw6A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw6A/nostruct-align/1bw6A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32560/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.450668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bw8A
id: 1bw8A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bw8A/nostruct-align/1bw8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10963/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.076660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bwx
id: 1bwx   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bwx/nostruct-align/1bwx.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25889/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.857651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1brfA
id: 1brfA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1brfA/nostruct-align/1brfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20268/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.096664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bylA
id: 1bylA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bylA/nostruct-align/1bylA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21834/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.623672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bzkA
id: 1bzkA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bzkA/nostruct-align/1bzkA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25522/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.943665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bxxA
id: 1bxxA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bxxA/nostruct-align/1bxxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18767/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.074661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bywA
id: 1bywA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bywA/nostruct-align/1bywA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9970/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.828674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bzbA
id: 1bzbA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bzbA/nostruct-align/1bzbA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8520/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.683655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bwzA
id: 1bwzA   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bwzA/nostruct-align/1bwzA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14982/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.931656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c1kA
id: 1c1kA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c1kA/nostruct-align/1c1kA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21328/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.672668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c3cA
id: 1c3cA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c3cA/nostruct-align/1c3cA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25455/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.830658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1bn7A
id: 1bn7A   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1bn7A/nostruct-align/1bn7A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20819/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.584656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c5eA
id: 1c5eA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c5eA/nostruct-align/1c5eA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10007/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.671677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c75A
id: 1c75A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c75A/nostruct-align/1c75A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16321/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c9fA
id: 1c9fA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c9fA/nostruct-align/1c9fA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9738/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.339661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c1gA
id: 1c1gA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c1gA/nostruct-align/1c1gA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25137/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.348663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c9oA
id: 1c9oA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c9oA/nostruct-align/1c9oA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10101/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.649658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1caxB
id: 1caxB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1caxB/nostruct-align/1caxB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26345/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.486664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cb7B
id: 1cb7B   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cb7B/nostruct-align/1cb7B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19122/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.251663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c94A
id: 1c94A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c94A/nostruct-align/1c94A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6943/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.788666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c9uA
id: 1c9uA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c9uA/nostruct-align/1c9uA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19268/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.180664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c1gB
id: 1c1gB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c1gB/nostruct-align/1c1gB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2366/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.348663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c1gC
id: 1c1gC   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c1gC/nostruct-align/1c1gC.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22600/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.410660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdzA
id: 1cdzA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdzA/nostruct-align/1cdzA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-138/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.277664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ccr
id: 1ccr   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ccr/nostruct-align/1ccr.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14887/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.157669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ceuA
id: 1ceuA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ceuA/nostruct-align/1ceuA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11768/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.479660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cfzA
id: 1cfzA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cfzA/nostruct-align/1cfzA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5535/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.214661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ckuA
id: 1ckuA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ckuA/nostruct-align/1ckuA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7537/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.289658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cdp
id: 1cdp   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cdp/nostruct-align/1cdp.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19312/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.092667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ccwB
id: 1ccwB   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ccwB/nostruct-align/1ccwB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23017/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.251663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1b37B
id: 1b37B   alignment found: /projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1b/1b37B/nostruct-align/1b37B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16134/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.157669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cjxA
id: 1cjxA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cjxA/nostruct-align/1cjxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27930/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.254654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cd9C
id: 1cd9C   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cd9C/nostruct-align/1cd9C.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32517/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.017670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ccwA
id: 1ccwA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ccwA/nostruct-align/1ccwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1785/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.731659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ct7A
id: 1ct7A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1ct7A/nostruct-align/1ct7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1ct7A/nostruct-align/1ct7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1ct7A/nostruct-align/1ct7A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.534653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cxpA
id: 1cxpA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cxpA/nostruct-align/1cxpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26891/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.795670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cr5A
id: 1cr5A   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cr5A/nostruct-align/1cr5A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17304/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cmoA
id: 1cmoA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cmoA/nostruct-align/1cmoA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21886/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.436661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1czpA
id: 1czpA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1czpA/nostruct-align/1czpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16549/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.376663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d0aB
id: 1d0aB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d0aB/nostruct-align/1d0aB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6558/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.539658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d02A
id: 1d02A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d02A/nostruct-align/1d02A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7351/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.620667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cvrA
id: 1cvrA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cvrA/nostruct-align/1cvrA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9261/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.338669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cxpC
id: 1cxpC   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cxpC/nostruct-align/1cxpC.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6616/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.944656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cruA
id: 1cruA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cruA/nostruct-align/1cruA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9266/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.702667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1c1gD
id: 1c1gD   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1c1gD/nostruct-align/1c1gD.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6484/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.410660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d0qA
id: 1d0qA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d0qA/nostruct-align/1d0qA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27288/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.757660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d1qA
id: 1d1qA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d1qA/nostruct-align/1d1qA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21718/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.247650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2iA
id: 1d2iA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2iA/nostruct-align/1d2iA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10098/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2rB
id: 1d2rB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2rB/nostruct-align/1d2rB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19507/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.985657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d3bA
id: 1d3bA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d3bA/nostruct-align/1d3bA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24337/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.712662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d3bB
id: 1d3bB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d3bB/nostruct-align/1d3bB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20310/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.860657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2vA
id: 1d2vA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2vA/nostruct-align/1d2vA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25692/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.795670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d4bA
id: 1d4bA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d4bA/nostruct-align/1d4bA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29648/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.697662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d5nA
id: 1d5nA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d5nA/nostruct-align/1d5nA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14737/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.424667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d4oA
id: 1d4oA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d4oA/nostruct-align/1d4oA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14434/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.949661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d1gA
id: 1d1gA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d1gA/nostruct-align/1d1gA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20223/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.046661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d6aB
id: 1d6aB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d6aB/nostruct-align/1d6aB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18205/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.385666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cvsC
id: 1cvsC   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cvsC/nostruct-align/1cvsC.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5087/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.499649
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d7qA
id: 1d7qA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d7qA/nostruct-align/1d7qA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16566/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.562668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d8bA
id: 1d8bA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d8bA/nostruct-align/1d8bA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18683/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.244659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d8jA
id: 1d8jA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d8jA/nostruct-align/1d8jA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-678/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.862671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d6jA
id: 1d6jA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d6jA/nostruct-align/1d6jA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.654663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d8dB
id: 1d8dB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d8dB/nostruct-align/1d8dB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17162/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.478668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1db1A
id: 1db1A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1db1A/nostruct-align/1db1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13011/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.705658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dbtA
id: 1dbtA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dbtA/nostruct-align/1dbtA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30184/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.189667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cmnA
id: 1cmnA   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cmnA/nostruct-align/1cmnA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16561/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.302658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cs0C
id: 1cs0C   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cs0C/nostruct-align/1cs0C.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17495/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.506668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dd5A
id: 1dd5A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dd5A/nostruct-align/1dd5A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5408/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.978668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d7mA
id: 1d7mA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d7mA/nostruct-align/1d7mA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24193/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.234665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d0bA
id: 1d0bA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d0bA/nostruct-align/1d0bA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27614/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.848663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dcfA
id: 1dcfA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dcfA/nostruct-align/1dcfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17028/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.062668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1devB
id: 1devB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1devB/nostruct-align/1devB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17995/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.979660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1deoA
id: 1deoA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1deoA/nostruct-align/1deoA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7371/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.616669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2mA
id: 1d2mA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2mA/nostruct-align/1d2mA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32584/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.582657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dd9A
id: 1dd9A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dd9A/nostruct-align/1dd9A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23202/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.079666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1df7A
id: 1df7A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1df7A/nostruct-align/1df7A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13614/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.138672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dg6A
id: 1dg6A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dg6A/nostruct-align/1dg6A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8216/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.076660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dfmA
id: 1dfmA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dfmA/nostruct-align/1dfmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24697/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1devC
id: 1devC   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1devC/nostruct-align/1devC.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.121658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ddzA
id: 1ddzA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1ddzA/nostruct-align/1ddzA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32627/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.526657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dceA
id: 1dceA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dceA/nostruct-align/1dceA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2481/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.561676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1di6A
id: 1di6A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1di6A/nostruct-align/1di6A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12756/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.485657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1di0A
id: 1di0A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1di0A/nostruct-align/1di0A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22360/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.888657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dioG
id: 1dioG   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dioG/nostruct-align/1dioG.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3545/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.602676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dioB
id: 1dioB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dioB/nostruct-align/1dioB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3422/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.170654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dj7A
id: 1dj7A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dj7A/nostruct-align/1dj7A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26150/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.425659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dj7B
id: 1dj7B   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dj7B/nostruct-align/1dj7B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16854/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.035675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkiA
id: 1dkiA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkiA/nostruct-align/1dkiA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7599/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.821671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dcqA
id: 1dcqA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dcqA/nostruct-align/1dcqA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23920/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.364670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dioA
id: 1dioA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dioA/nostruct-align/1dioA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8306/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.795670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgfA
id: 1dgfA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgfA/nostruct-align/1dgfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12373/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.723663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkrA
id: 1dkrA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkrA/nostruct-align/1dkrA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5396/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.435669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgyA
id: 1dgyA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgyA/nostruct-align/1dgyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgyA/nostruct-align/1dgyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgyA/nostruct-align/1dgyA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6285/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.291672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dgkN
id: 1dgkN   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dgkN/nostruct-align/1dgkN.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27029/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.860657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dm9A
id: 1dm9A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dm9A/nostruct-align/1dm9A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26716/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.330673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dmlA
id: 1dmlA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dmlA/nostruct-align/1dmlA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12130/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.149658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dlxA
id: 1dlxA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dlxA/nostruct-align/1dlxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20531/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.680664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dmuA
id: 1dmuA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dmuA/nostruct-align/1dmuA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29066/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.114670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dmlB
id: 1dmlB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dmlB/nostruct-align/1dmlB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8270/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.308655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dmwA
id: 1dmwA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dmwA/nostruct-align/1dmwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18939/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.668671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkuA
id: 1dkuA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkuA/nostruct-align/1dkuA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16256/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.816666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dn1A
id: 1dn1A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dn1A/nostruct-align/1dn1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19438/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.803665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dm0A
id: 1dm0A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dm0A/nostruct-align/1dm0A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26397/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.423676
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1do6A
id: 1do6A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1do6A/nostruct-align/1do6A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15626/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.778656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1d2fA
id: 1d2fA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1d2fA/nostruct-align/1d2fA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13799/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.955673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dp7P
id: 1dp7P   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dp7P/nostruct-align/1dp7P.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3168/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.597656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dl2A
id: 1dl2A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dl2A/nostruct-align/1dl2A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20693/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.229675
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dn1B
id: 1dn1B   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dn1B/nostruct-align/1dn1B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29566/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.547653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dg3A
id: 1dg3A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dg3A/nostruct-align/1dg3A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4796/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.304672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dqbA
id: 1dqbA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dqbA/nostruct-align/1dqbA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29283/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.713654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1drmA
id: 1drmA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1drmA/nostruct-align/1drmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7374/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.315659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dsvA
id: 1dsvA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dsvA/nostruct-align/1dsvA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5027/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.750671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dkvA
id: 1dkvA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dkvA/nostruct-align/1dkvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dkvA/nostruct-align/1dkvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dkvA/nostruct-align/1dkvA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22626/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.191650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dqwA
id: 1dqwA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dqwA/nostruct-align/1dqwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12367/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.275650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dozA
id: 1dozA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dozA/nostruct-align/1dozA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30594/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.797668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dt8A
id: 1dt8A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dt8A/nostruct-align/1dt8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dt8A/nostruct-align/1dt8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dt8A/nostruct-align/1dt8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2994/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.929657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dt4A
id: 1dt4A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dt4A/nostruct-align/1dt4A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14922/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.041656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dtoA
id: 1dtoA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dtoA/nostruct-align/1dtoA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13562/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.434662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dqrA
id: 1dqrA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dqrA/nostruct-align/1dqrA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29334/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.645660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dt9A
id: 1dt9A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dt9A/nostruct-align/1dt9A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32361/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.782669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dugA
id: 1dugA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dugA/nostruct-align/1dugA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10386/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.664673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dqaA
id: 1dqaA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dqaA/nostruct-align/1dqaA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27997/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.329666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dtgA
id: 1dtgA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dtgA/nostruct-align/1dtgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.844650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dulA
id: 1dulA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dulA/nostruct-align/1dulA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18697/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.570663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dpo
id: 1dpo   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dpo/nostruct-align/1dpo.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1716/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.916672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dv0A
id: 1dv0A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dv0A/nostruct-align/1dv0A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1564/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.626663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dr8B
id: 1dr8B   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dr8B/nostruct-align/1dr8B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5863/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.419662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dujA
id: 1dujA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dujA/nostruct-align/1dujA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3911/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.309662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dvkA
id: 1dvkA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dvkA/nostruct-align/1dvkA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19900/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.933670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dwnA
id: 1dwnA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dwnA/nostruct-align/1dwnA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3571/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.431671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dvjA
id: 1dvjA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dvjA/nostruct-align/1dvjA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30534/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.038651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1do0A
id: 1do0A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1do0A/nostruct-align/1do0A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17502/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.227661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dvpA
id: 1dvpA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dvpA/nostruct-align/1dvpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6970/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.289658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dxzA
id: 1dxzA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dxzA/nostruct-align/1dxzA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3643/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.826660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dy5A
id: 1dy5A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dy5A/nostruct-align/1dy5A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3403/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.815659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dx7A
id: 1dx7A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dx7A/nostruct-align/1dx7A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6023/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.615662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dtyA
id: 1dtyA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dtyA/nostruct-align/1dtyA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.192673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dwtA
id: 1dwtA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dwtA/nostruct-align/1dwtA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9383/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.449661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1e0aB
id: 1e0aB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1e0aB/nostruct-align/1e0aB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1361/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.153656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1duzB
id: 1duzB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1duzB/nostruct-align/1duzB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16310/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.161667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dz1A
id: 1dz1A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dz1A/nostruct-align/1dz1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22611/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.308655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dzrA
id: 1dzrA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dzrA/nostruct-align/1dzrA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20420/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.950668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dz3A
id: 1dz3A   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dz3A/nostruct-align/1dz3A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7227/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.195663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dx5I
id: 1dx5I   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dx5I/nostruct-align/1dx5I.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.810654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dzlA
id: 1dzlA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dzlA/nostruct-align/1dzlA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21221/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.280670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ecxA
id: 1ecxA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ecxA/nostruct-align/1ecxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2676/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.017654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ebmA
id: 1ebmA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ebmA/nostruct-align/1ebmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27874/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.335663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eesB
id: 1eesB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eesB/nostruct-align/1eesB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29806/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.182663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1egpB
id: 1egpB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1egpB/nostruct-align/1egpB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31618/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.214661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efiD
id: 1efiD   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efiD/nostruct-align/1efiD.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5129/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.981674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ebuA
id: 1ebuA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ebuA/nostruct-align/1ebuA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8057/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.933670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ej5A
id: 1ej5A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ej5A/nostruct-align/1ej5A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25553/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.676666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eblA
id: 1eblA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eblA/nostruct-align/1eblA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16462/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.912659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1efdN
id: 1efdN   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1efdN/nostruct-align/1efdN.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16362/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.622665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ei9A
id: 1ei9A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ei9A/nostruct-align/1ei9A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26054/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.112671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ejkA
id: 1ejkA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ejkA/nostruct-align/1ejkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejkA/nostruct-align/1ejkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejkA/nostruct-align/1ejkA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32581/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.386658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ej8A
id: 1ej8A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ej8A/nostruct-align/1ej8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29021/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.596664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ejgA
id: 1ejgA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejgA/nostruct-align/1ejgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30307/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.624664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ejhA
id: 1ejhA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ejhA/nostruct-align/1ejhA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30358/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.410660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ekcC
id: 1ekcC   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ekcC/nostruct-align/1ekcC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ekcC/nostruct-align/1ekcC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ekcC/nostruct-align/1ekcC.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19677/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.559662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1el6B
id: 1el6B   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1el6B/nostruct-align/1el6B.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32418/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.750671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ee4A
id: 1ee4A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ee4A/nostruct-align/1ee4A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25739/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.015656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1elkA
id: 1elkA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1elkA/nostruct-align/1elkA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19784/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.727661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1duzA
id: 1duzA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1duzA/nostruct-align/1duzA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6018/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.448669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1edqA
id: 1edqA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1edqA/nostruct-align/1edqA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26159/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.580658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ek0A
id: 1ek0A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ek0A/nostruct-align/1ek0A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25562/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.170670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1en7A
id: 1en7A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1en7A/nostruct-align/1en7A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.577667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1enwA
id: 1enwA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1enwA/nostruct-align/1enwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14058/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.381653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fbnA
id: 1fbnA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fbnA/nostruct-align/1fbnA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16223/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.557663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eiyB
id: 1eiyB   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eiyB/nostruct-align/1eiyB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16289/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.863663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1elwA
id: 1elwA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1elwA/nostruct-align/1elwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29380/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.763672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1et9A
id: 1et9A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1et9A/nostruct-align/1et9A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24286/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.703659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1enfA
id: 1enfA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1enfA/nostruct-align/1enfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3401/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.169662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1elrA
id: 1elrA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1elrA/nostruct-align/1elrA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8313/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.119659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1flmA
id: 1flmA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1flmA/nostruct-align/1flmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27506/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.948669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1flcB
id: 1flcB   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1flcB/nostruct-align/1flcB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22261/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.985657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gyfA
id: 1gyfA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gyfA/nostruct-align/1gyfA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15273/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.226669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hcb
id: 1hcb   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hcb/nostruct-align/1hcb.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12384/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.387650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1flcA
id: 1flcA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1flcA/nostruct-align/1flcA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-470/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.969666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hpy
id: 1hpy   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hpy/nostruct-align/1hpy.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29177/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.872665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hlgA
id: 1hlgA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hlgA/nostruct-align/1hlgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2225/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.749664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hpgA
id: 1hpgA   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hpgA/nostruct-align/1hpgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22252/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.323669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1h2rL
id: 1h2rL   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1h2rL/nostruct-align/1h2rL.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2258/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.800659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1elqA
id: 1elqA   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1elqA/nostruct-align/1elqA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3175/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.916672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dttA
id: 1dttA   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dttA/nostruct-align/1dttA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25638/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.890671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iuz
id: 1iuz   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iuz/nostruct-align/1iuz.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27141/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.073654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1icfB
id: 1icfB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1icfB/nostruct-align/1icfB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7112/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.945663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1joyA
id: 1joyA   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1joyA/nostruct-align/1joyA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11280/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.912659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iro
id: 1iro   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iro/nostruct-align/1iro.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15358/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.953659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jcv
id: 1jcv   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jcv/nostruct-align/1jcv.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30186/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.701660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gtxA
id: 1gtxA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gtxA/nostruct-align/1gtxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21333/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.996658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1jsf
id: 1jsf   alignment found: /projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1j/1jsf/nostruct-align/1jsf.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16614/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.442657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1lmq
id: 1lmq   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1lmq/nostruct-align/1lmq.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26332/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.055664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mwpA
id: 1mwpA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mwpA/nostruct-align/1mwpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7411/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.538666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1npsA
id: 1npsA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1npsA/nostruct-align/1npsA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18352/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.791656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nfiA
id: 1nfiA   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nfiA/nostruct-align/1nfiA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31132/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.841660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1om2A
id: 1om2A   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1om2A/nostruct-align/1om2A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-751/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.397659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1iarB
id: 1iarB   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1iarB/nostruct-align/1iarB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15552/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.831665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pszA
id: 1pszA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pszA/nostruct-align/1pszA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2788/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.318665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1nnt
id: 1nnt   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1nnt/nostruct-align/1nnt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21503/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.880661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1pvxA
id: 1pvxA   alignment found: /projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1p/1pvxA/nostruct-align/1pvxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17833/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.778656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qf8A
id: 1qf8A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qf8A/nostruct-align/1qf8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8147/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.440659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qftA
id: 1qftA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qftA/nostruct-align/1qftA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.640656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfnA
id: 1qfnA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfnA/nostruct-align/1qfnA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31957/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.403671
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfeA
id: 1qfeA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfeA/nostruct-align/1qfeA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8744/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.889664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qghA
id: 1qghA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qghA/nostruct-align/1qghA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5569/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.650650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1oasA
id: 1oasA   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1oasA/nostruct-align/1oasA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18185/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.467651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qfxA
id: 1qfxA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qfxA/nostruct-align/1qfxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1806/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.887665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ql1A
id: 1ql1A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1ql1A/nostruct-align/1ql1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-1957/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.718658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qldA
id: 1qldA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qldA/nostruct-align/1qldA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29791/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.534653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qloA
id: 1qloA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qloA/nostruct-align/1qloA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14746/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.722672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlgA
id: 1qlgA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlgA/nostruct-align/1qlgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-18712/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.385651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlwA
id: 1qlwA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlwA/nostruct-align/1qlwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31474/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.098663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qagA
id: 1qagA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qagA/nostruct-align/1qagA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6372/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.357666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fepA
id: 1fepA   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fepA/nostruct-align/1fepA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-3469/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.650665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qg8A
id: 1qg8A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qg8A/nostruct-align/1qg8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19624/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.837662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlzA
id: 1qlzA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlzA/nostruct-align/1qlzA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14494/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.830673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qm3A
id: 1qm3A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qm3A/nostruct-align/1qm3A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9992/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.844666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qm1A
id: 1qm1A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qm1A/nostruct-align/1qm1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28862/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.844666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qlyA
id: 1qlyA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qlyA/nostruct-align/1qlyA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9890/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -40.427673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qmhA
id: 1qmhA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qmhA/nostruct-align/1qmhA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23870/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.608658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qnaA
id: 1qnaA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qnaA/nostruct-align/1qnaA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28100/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.107651
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qo3C
id: 1qo3C   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qo3C/nostruct-align/1qo3C.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31829/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.682663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qgxA
id: 1qgxA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qgxA/nostruct-align/1qgxA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2811/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.420670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qoiA
id: 1qoiA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qoiA/nostruct-align/1qoiA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28748/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.146667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qouA
id: 1qouA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qouA/nostruct-align/1qouA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7633/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.948669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mctA
id: 1mctA   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mctA/nostruct-align/1mctA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27903/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.893661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1gsoA
id: 1gsoA   alignment found: /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1g/1gsoA/nostruct-align/1gsoA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23549/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.031677
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqvA
id: 1qqvA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqvA/nostruct-align/1qqvA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27038/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.082672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qoyA
id: 1qoyA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qoyA/nostruct-align/1qoyA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-20439/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.616653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qo7A
id: 1qo7A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qo7A/nostruct-align/1qo7A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25189/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.173660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qsmA
id: 1qsmA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qsmA/nostruct-align/1qsmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17469/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.130661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qmgA
id: 1qmgA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qmgA/nostruct-align/1qmgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10857/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -11.010666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qu5A
id: 1qu5A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qu5A/nostruct-align/1qu5A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24852/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.895660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qu8A
id: 1qu8A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qu8A/nostruct-align/1qu8A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qu8A/nostruct-align/1qu8A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qu8A/nostruct-align/1qu8A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8124/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.511673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qsdA
id: 1qsdA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qsdA/nostruct-align/1qsdA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21104/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.300659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qu1A
id: 1qu1A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qu1A/nostruct-align/1qu1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-604/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.019669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qu6A
id: 1qu6A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qu6A/nostruct-align/1qu6A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-14492/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.971664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rdg
id: 1rdg   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rdg/nostruct-align/1rdg.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6918/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.934662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qoxN
id: 1qoxN   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qoxN/nostruct-align/1qoxN.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24423/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.708664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sn4A
id: 1sn4A   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sn4A/nostruct-align/1sn4A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25421/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.561661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qnjA
id: 1qnjA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qnjA/nostruct-align/1qnjA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-10040/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.034668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1une
id: 1une   alignment found: /projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1u/1une/nostruct-align/1une.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12098/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.225662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1repC
id: 1repC   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1repC/nostruct-align/1repC.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-27065/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.494659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1xypA
id: 1xypA   alignment found: /projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1x/1xypA/nostruct-align/1xypA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19843/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.047653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2afpA
id: 2afpA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2afpA/nostruct-align/2afpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6651/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.740662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2alcA
id: 2alcA   alignment found: /projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2a/2alcA/nostruct-align/2alcA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.457672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1sup
id: 1sup   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1sup/nostruct-align/1sup.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15142/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.997650
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2btcI
id: 2btcI   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2btcI/nostruct-align/2btcI.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11105/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.255661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bidA
id: 2bidA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bidA/nostruct-align/2bidA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-2749/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.113663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2bvwA
id: 2bvwA   alignment found: /projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2b/2bvwA/nostruct-align/2bvwA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31917/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.188660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1larA
id: 1larA   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1larA/nostruct-align/1larA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28918/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.684662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yrgA
id: 1yrgA   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yrgA/nostruct-align/1yrgA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31990/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.637665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2dpmA
id: 2dpmA   alignment found: /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2d/2dpmA/nostruct-align/2dpmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28610/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.585663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qqtA
id: 1qqtA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qqtA/nostruct-align/1qqtA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-23072/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.894653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lisA
id: 2lisA   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lisA/nostruct-align/2lisA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17284/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.716660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fcbA
id: 2fcbA   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fcbA/nostruct-align/2fcbA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31941/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.100662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2plt
id: 2plt   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2plt/nostruct-align/2plt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29879/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.701660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cb5A
id: 2cb5A   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cb5A/nostruct-align/2cb5A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12676/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.459656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2sfa
id: 2sfa   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2sfa/nostruct-align/2sfa.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8973/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.367661
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1yrgB
id: 1yrgB   alignment found: /projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1y/1yrgB/nostruct-align/1yrgB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25261/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.678665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ovo
id: 3ovo   alignment found: /projects/compbio/experiments/models.97/pdb/3o/3ovo/nostruct-align/3ovo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3o/3ovo/nostruct-align/3ovo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3o/3ovo/nostruct-align/3ovo.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25993/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.034668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3ygsP
id: 3ygsP   alignment found: /projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3y/3ygsP/nostruct-align/3ygsP.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-6326/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.905670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2fnbA
id: 2fnbA   alignment found: /projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2f/2fnbA/nostruct-align/2fnbA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-9897/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.890656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4ubpA
id: 4ubpA   alignment found: /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4u/4ubpA/nostruct-align/4ubpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32680/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.704666
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 487dL
id: 487dL   alignment found: /projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/48/487dL/nostruct-align/487dL.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26551/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.932663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4ubpB
id: 4ubpB   alignment found: /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4u/4ubpB/nostruct-align/4ubpB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19333/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.197662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qmmA
id: 1qmmA   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qmmA/nostruct-align/1qmmA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qmmA/nostruct-align/1qmmA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qmmA/nostruct-align/1qmmA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16091/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.259659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 6rxn
id: 6rxn   alignment found: /projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/6r/6rxn/nostruct-align/6rxn.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-11148/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.738663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4ubpC
id: 4ubpC   alignment found: /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4u/4ubpC/nostruct-align/4ubpC.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22516/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.263657
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2er7E
id: 2er7E   alignment found: /projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2e/2er7E/nostruct-align/2er7E.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-25071/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.769653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5tmpA
id: 5tmpA   alignment found: /projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5t/5tmpA/nostruct-align/5tmpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28047/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.833664
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 7atjA
id: 7atjA   alignment found: /projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/7a/7atjA/nostruct-align/7atjA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8088/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.423660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4uagA
id: 4uagA   alignment found: /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4u/4uagA/nostruct-align/4uagA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17589/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.907669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 32c2A
id: 32c2A   alignment found: /projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/32/32c2A/nostruct-align/32c2A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26285/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.278656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1dceB
id: 1dceB   alignment found: /projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1d/1dceB/nostruct-align/1dceB.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16766/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.318665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1qa1A
id: 1qa1A   alignment found: /projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1q/1qa1A/nostruct-align/1qa1A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31080/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.488663
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1cgt
id: 1cgt   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1cgt/nostruct-align/1cgt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-28996/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -10.031662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1crl
id: 1crl   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1crl/nostruct-align/1crl.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-16110/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.258667
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fdd
id: 1fdd   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fdd/nostruct-align/1fdd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-32376/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.410660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mrt
id: 1mrt   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mrt/nostruct-align/1mrt.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24933/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.147659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ofv
id: 1ofv   alignment found: /projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1o/1ofv/nostruct-align/1ofv.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7178/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.394669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1s01
id: 1s01   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1s01/nostruct-align/1s01.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7402/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.978653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3adk
id: 3adk   alignment found: /projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3a/3adk/nostruct-align/3adk.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-31837/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.990662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3egf
id: 3egf   alignment found: /projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3e/3egf/nostruct-align/3egf.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30387/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.681656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1caj
id: 1caj   alignment found: /projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1c/1caj/nostruct-align/1caj.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30674/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.359665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1eco
id: 1eco   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1eco/nostruct-align/1eco.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-7670/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.356659
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1fha
id: 1fha   alignment found: /projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1f/1fha/nostruct-align/1fha.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26021/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.192673
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1hra
id: 1hra   alignment found: /projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1h/1hra/nostruct-align/1hra.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-17422/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.196655
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ipd
id: 1ipd   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ipd/nostruct-align/1ipd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-5292/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.384674
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ixa
id: 1ixa   alignment found: /projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1i/1ixa/nostruct-align/1ixa.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-30407/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -5.354660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1le4
id: 1le4   alignment found: /projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1l/1le4/nostruct-align/1le4.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-12346/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.478668
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1mgn
id: 1mgn   alignment found: /projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1m/1mgn/nostruct-align/1mgn.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-22160/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.392654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ndk
id: 1ndk   alignment found: /projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1n/1ndk/nostruct-align/1ndk.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19123/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.894669
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1rnd
id: 1rnd   alignment found: /projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1r/1rnd/nostruct-align/1rnd.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-15525/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.812653
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1spa
id: 1spa   alignment found: /projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1s/1spa/nostruct-align/1spa.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24279/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.110672
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2ihl
id: 2ihl   alignment found: /projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2i/2ihl/nostruct-align/2ihl.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-13904/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.003662
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2lh2
id: 2lh2   alignment found: /projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2l/2lh2/nostruct-align/2lh2.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-19701/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.517654
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2pf1
id: 2pf1   alignment found: /projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2p/2pf1/nostruct-align/2pf1.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26780/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -6.959656
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2spo
id: 2spo   alignment found: /projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2s/2spo/nostruct-align/2spo.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24770/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.427658
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3cd4
id: 3cd4   alignment found: /projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3c/3cd4/nostruct-align/3cd4.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-21526/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.451660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 3pgk
id: 3pgk   alignment found: /projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/3p/3pgk/nostruct-align/3pgk.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26874/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.239670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 4fgf
id: 4fgf   alignment found: /projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/4f/4fgf/nostruct-align/4fgf.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-26287/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -7.614670
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 5nn9
id: 5nn9   alignment found: /projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/5n/5nn9/nostruct-align/5nn9.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-29100/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.318665
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 2cgpA
id: 2cgpA   alignment found: /projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/2c/2cgpA/nostruct-align/2cgpA.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-24060/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -8.854660
Database has 1 sequences with 56 residues.
entering get_template_model_for_db_search: template_id: 1ez0A
id: 1ez0A   alignment found: /projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t99.a2m.gz
Reading parameter file /projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t99-w0.5.mod
/projects/compbio/experiments/models.97/pdb/1e/1ez0A/nostruct-align/1ez0A.t99-w0.5.mod(23):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-4933/tmp.a2m
SAM: /projects/compbio/bin/alpha/hmmscore v3.1b (February 24, 1999) compiled 05/16/00_17:09:35
Calculating Distances (. = 1000 sequences)
.
Average NLL-Simple NULL score:        -9.511658
Database has 1 sequences with 56 residues.
echo ReadNeuralNet /projects/compbio/usr/karplus/predict-2nd/testing/networks/overrep-2500-IDaa13-5-10-7-10-5-10-11-ehl2-seeded9-stride-trained.net > tmp.script
echo ReadA2M T0099.t2k.a2m.gz >> tmp.script
echo PrintPrediction T0099.t2k.2d 3670-4530-6947 >> tmp.script
echo PrintPredictionFasta T0099.t2k.2d.seq >> tmp.script
echo PrintRDB T0099.t2k.2d.rdb >> tmp.script
predict-2nd < tmp.script
# command:# Neural network set to overrep-2500-IDaa13-5-10-7-10-5-10-11-ehl2-seeded9-stride-trained.net
# command:# Reading A2M format from T0099.t2k.a2m.gz
# Using SequenceWeight EntropyWeight(1.4, 10)
# Using regularizer /projects/compbio/lib/recode3.20comp for sequence weight regularizer.
# T0099.t2k.a2m with 871 sequences, total weight= 76.5082 avg weight= 0.0878395 46 iterations
# AdjustWeights couldn't save exactly 1.4 bits/position, saving 1.3988 bits.
Regularizing alignment for T0099.t2k.a2m.gz
# After reading T0099.t2k.a2m.gz, have 56 columns in 1 chains
# command:# Initializing Gain for FinalLayer
# Initializing Gain for ordering_layer
# Initializing Gain for SecondLayer
# Initializing Gain for FirstLayer
# Network initialization done
# Printing prediction to T0099.t2k.2d
# command:# Network initialization done
# Printing prediction  in FASTA format to T0099.t2k.2d.seq
# command:# Network initialization done
# Printing prediction to T0099.t2k.2d.rdb
# command:rm tmp.script