PFRMAT SS
TARGET T0099
AUTHOR 3670-4530-6947
METHOD Using neural net overrep-2500-IDaa13-5-10-7-10-5-10-11-ehl2-seeded9-stride-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   10
METHOD	    7	   10
METHOD	    5	   10
METHOD	   11	    3 (1 EHL2 )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0099.t2k.a2m.gz
METHOD with weighted counts, using EntropyWeight(1.4 bits/column, 10)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with /projects/compbio/lib/recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 76.5082
METHOD
MODEL 1
E E 0.75
F E 0.92
I E 0.97
A E 0.98
I E 0.96
Y E 0.85
D E 0.53
Y C 0.59
K C 0.67
A C 0.79
E C 0.86
T C 0.89
E C 0.80
E C 0.74
D C 0.59
L C 0.52
T E 0.55
I C 0.50
K C 0.80
K C 0.92
G C 0.97
E C 0.61
K E 0.84
L E 0.97
E E 0.99
I E 0.99
I E 0.96
E E 0.83
K C 0.80
E C 0.96
G C 0.97
D C 0.97
W E 0.61
W E 0.91
K E 0.94
A E 0.95
K E 0.93
A E 0.86
I C 0.58
G C 0.93
S C 0.98
G C 0.98
E C 0.62
I E 0.66
G E 0.58
Y E 0.67
I E 0.53
P C 0.63
A H 0.45
N H 0.48
Y H 0.45
I H 0.44
A E 0.53
A E 0.52
A C 0.65
E C 0.92
END