a2m2html output for file tmp.a2m

Citations (SAM, SAM-T99, HMMs)

R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting remote protein homologies, Bioinformatics 14(10):846-856, 1999.
A. Krogh et al., Hidden Markov models in computational biology: Applications to protein modeling, JMB 235:1501-1531, Feb 1994.

Sequence numbers correspond to the following labels:

- T0095 Alpha(E)-catenin fragment, mouse
- gi|2134736|pir||I39438_388:631 alpha-catenin - human (Homo sapiens)
- gi|404105|dbj|BAA03530.1| (D14705) 'human alpha-catenin' [Homo sapiens] (Homo sapiens)
- gi|1092190|prf||2023176A alpha catenin [Homo sapiens] (Homo sapiens)
- gi|461853|sp|P35221|CTN1_HUMAN_388:631 ALPHA-1 CATENIN (CADHERIN-ASSOCIATED PROTEIN) (ALPHA E-CATENIN) (Homo sapiens)
- gi|484373|pir||JN0607 alpha-catenin - human (Homo sapiens)
- gi|433411|dbj|BAA02979.1| (D13866) alpha-catenin [Homo sapiens] (Homo sapiens)
- gi|4092761|gb|AAC99459.1| (AF102803) alphaE-catenin [Homo sapiens] (Homo sapiens)
- gi|6753294|ref|NP_033948.1|_388:631 catenin alpha 1 (Mus musculus)
- gi|117607|sp|P26231|CTN1_MOUSE ALPHA-1 CATENIN (102 KD CADHERIN-ASSOCIATED PROTEIN) (CAP102) (ALPHA E-CATENIN) (Mus musculus)
- gi|90338|pir||A39529 cadherin-associated protein, 102K - mouse (Mus musculus)
- gi|49935|emb|CAA42607.1| (X59990) alpha-catenin [Mus musculus] (Mus musculus)
- gi|220361|dbj|BAA14376.1| (D90362) cadherin associated protein [Mus musculus] (Mus musculus)
- gi|5929689|gb|AAD56591.1|AF099737_1_388:631 (AF099737) cell-adhesion protein alphaE catenin [Danio rerio] (Danio rerio)
- gi|1199644|gb|AAA88906.1|_385:628 (U47624) alpha(E)-catenin [Xenopus laevis] (Xenopus laevis)
- gi|4503127|ref|NP_001894.1|_388:632 catenin (cadherin-associated protein), alpha 1 (102kD) (Homo sapiens)
- gi|1172426|gb|AAA86430.1| (L23805) alpha1(E)-catenin [Homo sapiens] (Homo sapiens)
- gi|1082187|pir||JC2542_388:632 alpha-2(E)-catenin - human (Homo sapiens)
- gi|414982|gb|AAA18949.1| (U03100) alpha2(E)-catenin [Homo sapiens] (Homo sapiens)
- gi|1098900|gb|AAA82613.1|_383:626 (U34687) alpha catenin [Lytechinus variegatus] (Lytechinus variegatus)
- gi|7656999|ref|NP_004380.1|_386:629 catenin (cadherin-associated protein), alpha 2 (Homo sapiens)
- gi|6960317|gb|AAA58407.2| (M94151) cadherin-associated protein-related [Homo sapiens] (Homo sapiens)
- gi|117609|sp|P26232|CTN2_HUMAN_386:629 ALPHA-2 CATENIN (ALPHA-CATENIN RELATED PROTEIN) (ALPHA N-CATENIN) (Homo sapiens)
- gi|345780|pir||A45011 CAP-R protein - human (Homo sapiens)
- gi|399311|sp|P30997|CTN2_CHICK_387:630 ALPHA-2 CATENIN (ALPHA N-CATENIN) (NEURAL ALPHA-CATENIN) (Gallus gallus)
- gi|283862|pir||A43000 alpha N-catenin - chicken (Gallus gallus)
- gi|222788|dbj|BAA01863.1| (D11090) alpha N-catenin [Gallus gallus] (Gallus gallus)
- gi|2137136|pir||I49499_386:629 alpha N-catenin I - mouse (Mus musculus)
- gi|475008|dbj|BAA04969.1| (D25281) alpha N-catenin I [Mus musculus] (Mus musculus)
- gi|6753296|ref|NP_033949.1|_386:629 catenin alpha 2 (Mus musculus)
- gi|2501658|sp|Q61301|CTN2_MOUSE ALPHA-2 CATENIN (ALPHA-CATENIN RELATED PROTEIN) (ALPHA N-CATENIN) (Mus musculus)
- gi|2137137|pir||I49500 alpha N-catenin II - mouse (Mus musculus)
- gi|475010|dbj|BAA04970.1| (D25282) alpha N-catenin II [Mus musculus] (Mus musculus)
- gi|7289861|gb|AAF45466.1|_391:634 (AE002656) alpha-Cat gene product [Drosophila melanogaster] (Drosophila melanogaster)
- gi|461852|sp|P35220|CTNA_DROME_409:652 ALPHA-CATENIN (Drosophila melanogaster)
- gi|422436|pir||A40694 cadherin-associated protein D alpha-catenin - fruit fly (Drosophila melanogaster) (Drosophila melanogaster)
- gi|285752|dbj|BAA03067.1| (D13964) alpha-catenin [Drosophila melanogaster] (Drosophila melanogaster)
- gi|138546|sp|P12003|VINC_CHICK_593:835 VINCULIN (Gallus gallus)
- gi|212873|gb|AAA49136.1| (J04126) vinculin [Gallus gallus] (Gallus gallus)
- gi|2144822|pir||A29997_593:835 meta-vinculin - chicken (Gallus gallus)
- gi|7506721|pir||T24221_415:673 hypothetical protein R13H4.4 - Caenorhabditis elegans (Caenorhabditis elegans)
- gi|63880|emb|CAA68412.1|_593:835 (Y00312) vinculin (AA 1-882) (2891 is 2nd base in codon) [Gallus gallus] (Gallus gallus)
- gi|2738780|gb|AAB94551.1|_382:640 (AF016852) HMP-1 [Caenorhabditis elegans] (Caenorhabditis elegans)
- gi|6434310|emb|CAB61019.1| (Z81579) predicted using Genefinder~Similarity to Drosophila alpha-catenin (SW:CTNA_DROME)~cDNA EST EMBL:D35134 comes from this gene~cDNA EST EMBL:D64641 comes from this gene~cDNA EST EMBL:D65067 comes from this gene~cDNA EST EMBL:D65241 comes from thi> (Caenorhabditis elegans)
- gi|7019571|ref|NP_037398.1|_383:626 alpha-catenin-like protein (Homo sapiens)
- gi|6650345|gb|AAF21801.1|AF091606_1 (AF091606) alpha-catenin-like protein VR22 [Homo sapiens] (Homo sapiens)
- gi|1228974|emb|CAA65421.1|_478:721 (X96601) vinculin [Drosophila melanogaster] (Drosophila melanogaster)
- gi|2655896|emb|CAA15646.1|_443:686 (AL009171) 62D9.i [Drosophila melanogaster] (Drosophila melanogaster)
- gi|2827490|emb|CAA15691.1|_478:721 (AL009193) EG:103B4.1 [Drosophila melanogaster] (Drosophila melanogaster)
- gi|7290291|gb|AAF45752.1| (AE003423) Vinc gene product [Drosophila melanogaster] (Drosophila melanogaster)
- gi|6724323|ref|NP_033528.1|_593:835 vinculin (Mus musculus)
- gi|3287937|sp|Q64727|VINC_MOUSE VINCULIN (Mus musculus)
- gi|7441354|pir||T10108 vinculin - mouse (Mus musculus)
- gi|309533|gb|AAB96843.1| (L18880) vinculin [Mus musculus] (Mus musculus)
- gi|138545|sp|P19826|VINC_CAEEL_489:729 VINCULIN (P107B) (Caenorhabditis elegans)
- gi|156276|gb|AAA28002.1| (J04804) vinculin [Caenorhabditis elegans] (Caenorhabditis elegans)
- gi|102552|pir||A33509_489:729 vinculin - Caenorhabditis elegans (Caenorhabditis elegans)
- gi|4507877|ref|NP_003364.1|_593:835 vinculin isoform VCL (Homo sapiens)
- gi|138547|sp|P18206|VINC_HUMAN VINCULIN (Homo sapiens)
- gi|340237|gb|AAA61283.1| (M33308) vinculin [Homo sapiens] (Homo sapiens)
- gi|7669550|ref|NP_054706.1|_593:835 VCL isoform meta-VCL (Homo sapiens)
- gi|2144821|pir||A35955 meta-vinculin - human (Homo sapiens)
- gi|510684|gb|AAB96842.1|_488:730 (U07023) vinculin [Brugia malayi] (Brugia malayi)
- gi|3309107|gb|AAC26012.1|_410:524 (AF006071) alpha-catenin related protein [Mus musculus] (Mus musculus)
- gi|5701589|gb|AAC64632.2|_397:515 (AF077541) Y23H5A.6 gene product [Caenorhabditis elegans] (Caenorhabditis elegans)
- gi|6652854|gb|AAF22509.1|AF113936_1_440:558 (AF113936) alpha-catenin-related protein [Drosophila melanogaster] (Drosophila melanogaster)
- gi|6403442|gb|AAF07819.1|AF135021_1_411:525 (AF135021) alpha2-catulin [Homo sapiens] (Homo sapiens)
- gi|6403462|gb|AAF07820.1| (AF134888) alpha2-catulin [Homo sapiens] (Homo sapiens)
- gi|4503129|ref|NP_003789.1|_411:525 catenin (cadherin-associated protein), alpha-like 1 (Homo sapiens)
- gi|3309105|gb|AAC26011.1| (AF006070) alpha-catenin related protein [Homo sapiens] (Homo sapiens)
- gi|3342778|gb|AAC27693.1| (U97067) alpha-catenin-like protein [Homo sapiens] (Homo sapiens)
- gi|3818590|gb|AAC69576.1| (AF080071) alpha-catenin-like protein; CG-4 [Homo sapiens] (Homo sapiens)
- gi|3982579|gb|AAC83460.1| (AF030233) alpha-catenin-like protein [Homo sapiens] (Homo sapiens)
- gi|6403463|gb|AAF07821.1| (AF134888) alpha-catulin [Homo sapiens] (Homo sapiens)
- gi|2687496|gb|AAB88839.1|_97:163 (U87554) alpha catenin [Drosophila grimshawi] (Drosophila grimshawi)
- gi|7512278|pir||T08703_32:146 alpha-catenin homolog DKFZp564C1969.1 - human (fragment) (Homo sapiens)
- gi|4884263|emb|CAB43238.1| (AL050016) hypothetical protein [Homo sapiens] (Homo sapiens)

                10        20             30        40        50        
                |         |              |         |         |        
   1 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   2 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   3 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   4 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   5 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   6 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   7 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   8 DHVSDSFL..ETNVPLLVLIEAAK.....NGNEKEVKEYAQVFREHANKLIEVANLA..C.....
   9 DHVSDSFL..ETNVPLLVLIVAAK.....SGNEAEVEKYAKVFQEHANKLVEVANLA..C.....
  10 DHISDSFL..ETNVPLLVLIEAAK.....SGNEKEVKEYAQVFREHANKLVEVANLA..C.....
  11 DHISDSFL..ETNVPLLVLIEAAK.....SGNEKEVKEYAQVFREHANKLVEVANLA..C.....
  12 DHISDSFL..ETNVPLLVLIEAAK.....SGNEKEVKEYAQVFREHANKLVEVANLA..C.....
  13 DHISDSFL..ETNVPLLVLIEAAK.....SGNEKEVKEYAQVFREHANKLVEVANLA..C.....
  14 DHISDSFL..ETNVPLLVLIEAAK.....SGNEKEVKEYAQVFREHANKLVEVANLA..C.....
  15 DHVSDSFL..ETTTPLLDLIEAAK.....SGNEKKVREKSEIFTKHAEKLVEVANLV..C.....
  16 DHVSDSFL..ETTTPLLDLIEAAK.....SGNEKKVREKSEIFTKHAEKLVEVANLV..C.....
  17 QEVSDVFS..DTTTPIKLLAVAATapsdtPNREEVFEERAANFENHAARLGATAEKA..A.....
  18 QEVSDVFS..DTTTPIKLLAVAATapsdtPNREEVFEERAANFENHAARLGATAEKA..A.....
  19 DHISDAFL..DTRTPLILLIEAAK.....EGHEENTRYRSKMFQEHANEIVSVARLS..C.....
  20 QEVSDVFS..DTTTPIKLLAVAATapsdtPNREEVFEERAANFENHAARLGATAEKA..A.....
  21 DHISDAFL..DTRTPLILLIEAAK.....EGHEENTRYRSKMFQEHANEIVSVARLS..C.....
  22 DHVSDSFL..DTTVPLLVLIEAAK.....NGREKEIKEYAAIFHEHTSRLVEVANLA..C.....
  23 NRIVQDFM..DVSTPLKQFTEAVLqpegtPGREQNFNQKSNNLQAFSDRASKTSRMVaaG.....
  24 NRIVQDFM..DVSTPLKQFTEAVLqpegtPGREQNFNQKSNNLQAFSDRASKTSRMVaaG.....
  25 NRIVQDFM..DVSTPLKQFTEAVLqpegtPGREQNFNQKSNNLQAFSDRASKTSRMVaaG.....
  26 QEVSDVFS..DTTTPIKLLAVAATappdaPNREEVFDERAANFENHSGRLGATAEKA..A.....
  27 DRVVDDFA..DITTPLKQFVEAVHadpydPNREQNFVDKSQRLTDHSQSMTTTARLVasC.....
  28 DRVVDDFA..DITTPLKQFVEAVHadpydPNREQNFVDKSQRLTDHSQSMTTTARLVasC.....
  29 QEVSDVFS..DTTTPIKLLAVAATappdaPNREEVFDERAANFENHSGKLGATAEKA..A.....
  30 QEVSDVFS..DTTTPIKLLAVAATappdaPNREEVFDERAANFENHSGKLGATAEKA..A.....
  31 DRVVEDFA..DISTPLKQFVDAVYasptiVNRELSFEEKAHNLDDHSSRCANTALLVakC.....
  32 ------FH..ADHVVLKALKVTGV.....EGNLEALAEYACKLSEQKEQLVETCRLL..R.....
  33 EQISEVLRanEDQVLLSSMKACAV.....SGDIDGVEKYMHKFREHADHMQEVCRLL..H.....
  34 EDFNESLK..ICSKLVKSFHVLAT.....NYDIDNLNQRSSKFHDCCDHIFDICKLL..Q.....
  35 ------YH..ADHVVLKALKLTGV.....EGNLEALAEYACKLSEQKEQLVETCRLL..R.....
  36 ------YH..ADHVVLKALKLTGV.....EGNLEALAEYACKLSEQKEQLVETCRLL..R.....
  37 DHVSDSFL..ETTTPLIDLIDAAK.....SGNEKKVREKAEIFTKHAEKLVEVANLV..C.....
  38 --------..--------------.....-ERMEDFTDSAYTSHEHRERILELSTQA..Rm17kk


              60        70        80         90       100       110    
              |         |         |          |         |         |    
   1 SISN.NEEGVKLVRMSASQLEALCPQVINAA.LALAAKPQSKLAQENMDLFKEQWEKQVRVLTDA
   2 SISN.NEEGVKLVRMSASQLEALCPQVINAA.LALAAKPQSKLAQENMDLFKEQWEKQVRVLTDA
   3 SISN.NEEGVKLVRMSASQLEALCPQVINAA.LALAAKPQSKLAQENMDLFKEQWEKQVRVLTDA
   4 SISN.NEEGVKLVRMSASQLEALCPQVINAA.LALAAKPQSKLAQENMDLFKEQWEKQVRVLTDA
   5 SISN.NEEGVKLVRMAASQLETLCPQVINAA.LALAAKPNSKVAQDNMDLFKDQWEKQVRVLTDA
   6 SISN.NEEGVKLVRISAGQLESLCPQVINAA.LALAAKPNSKMAQENMDLYKEQWERQVRVLTDA
   7 SISN.NEEGVKLVRMSASQLEAGCPQVINAAtWALAPKPQSKLAQENMDLFKEQWEKQVRVLTDA
   8 SISN.NEEGVKLVRMSASQLEAGCPQVINAAtWALAPKPQSKLAQENMDLFKEQWEKQVRVLTDA
   9 SMSN.NEEGVKMVRMAATQIENLCPQVINAA.RILVARPRSKAAQDNMDVFKDQWETQVRLLTEA
  10 SISN.NEEGVKLVRMAATQIDSLCPQVINAA.LTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEA
  11 SISN.NEEGVKLVRMAATQIDSLCPQVINAA.LTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEA
  12 SISN.NEEGVKLVRMAATQIDSLCPQVINAA.LTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEA
  13 SISN.NEEGVKLVRMAATQIDSLCPQVINAA.LTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEA
  14 SISN.NEEGVKLVRMAATQIDSLCPQVINAA.LTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEA
  15 SMSN.NEDGVKMVRYAAAQIESLCPQVINAA.SILTVRPNSKVAQENMTTYRQAWEVQVRILTEA
  16 SMSN.NEDGVKMVRYAAAQIESLCPQVINAA.SILTVRPNSKVAQENMTTYRQAWEVQVRILTEA
  17 AVGTaNKTTVEGIQATVKSARELTPQVVSAA.RILLRNPGNQAAYEHFETMKNQWIDNVEKMTGL
  18 AVGTaNKTTVEGIQATVKSARELTPQVVSAA.RILLRNPGNQAAYEHFETMKNQWIDNVEKMTGL
  19 QLSS.DVESVSVIQHTAAQLEKLAPQVAQAA.ILLCHQPTSKTAQENMETYKNAWFDKVRLLTTA
  20 AVGTaNKTTVEGIQATVKSARELTPQVVSAA.RILLRNPGNQAAYEHFETMKNHWIDNVEKMTGL
  21 QLSS.DVESVSVIQHTAAQLEKLAPQVAQAA.ILLCHQPTSKTAQENMETYKNAWFDKVRLLTTA
  22 SMST.NEDGIKIVKIAANHLETLCPQIINAA.LALAARPKSQAVKNTMEMYKRTWENHIHVLTEA
  23 GACG.NKKIAEILLSSAAQVDSLTPQLISAG.RIRMNYPGSKAADEHLQNLKQQYADTVLRMRTL
  24 GACG.NKKIAEILLSSAAQVDSLTPQLISAG.RIRMNYPGSKAADEHLQNLKQQYADTVLRMRTL
  25 GACG.NKKIAEILLSSAAQVDSLTPQLISAG.RIRMNYPGSKAADEHLQNLKQQYADTVLRMRTL
  26 AVGTaNKSTVEGIQASVKTARELTPQVISAA.RILLRNPGNQAAYEHFETMKNQWIDNVEKMTGL
  27 GPSK.SKKTVEAILDTAEKVEQLTPQLVNAG.RVRLHNPGSE---QHFENIHKQYADALHRLRSH
  28 GPSK.SKKTVEAILDTAEKVEQLTPQLVNAG.RVRLHNPGSE---QHFENIHKQYADALHRLRSH
  29 AVGTaNKSTVEGIQASVKTARELTPQVVSAA.RILLRNPGNQAAYEHFETMKNQWIDNVEKMTGL
  30 AVGTaNKSTVEGIQASVKTARELTPQVVSAA.RILLRNPGNQAAYEHFETMKNQWIDNVEKMTGL
  31 GPCK.NKKTVEAIIEAANQVNAMTPQVIKAG.KIRLHN-DSDSANLHFDNLRREYSDVLNRLRSH
  32 HISG.TEPLEITCIHAEETFQVTGQQIISAA.ETLTLHPSSKIAKENLDVFCEAWESQMSDMATL
  33 HISI.TDALHVHTGHVERNMRALAPLTILAG.RTLCVHPSSRIARENLEVFCDTWGQAVNDLSRV
  34 HIAP.TERLQVQAKCLAINLRIYGPQVFIAA.KILWKYSNSSAANENFESFSDMWKWLTNEISMI
  35 HISG.TEPLEITCIHAEETFQVTGQQIISAA.ETLTLHPSSKIAKENLDVFCEAWESQISDMSTL
  36 HISG.TEPLEITCIHAEETFQVTGQQIISAA.ETLTLHPSSKIAKENLDVFCEAWESQISDMSTL
  37 SMSN.NEDGVKMVRYAA--------------.---------------------------------
  38 TKSI.AEELELSILKISHSLNELKKEIISAA.ETLTLHPSSKIAKENLDVFCEAWESQISDMSTL


         120       130       140            150       160       170    
          |         |         |              |         |         |    
   1 VDDITSIDDFLAVSENHILEDVNKCVIAL.....QEKDVDGLDRTAGAIRGRAARVIHVVTSEMD
   2 VDDITSIDDFLAVSENHILEDVNKCVIAL.....QEKDVDGLDRTAGAIRGRAARVIHVVTSEMD
   3 VDDITSIDDFLAVSENHILEDVNKCVIAL.....QEKDVDGLDRTAGAIRGRAARVIHVVTSEMD
   4 VDDITSIDDFLAVSENHILEDVNKCVIAL.....QEKDVDGLDRTAGAIRGRAARVIHVVTSEMD
   5 VDDITSIDDFLCVSENHILEDVNKCVIAL.....QEKDVDGLDRTAGAIRGRAARVVHVVTSEMD
   6 VDDITSIDDFLAVSENHILEDVNKCVIAL.....QERDVDGLDRTAGAIRGRAARVIHVVTSEMD
   7 VDDITSIDDFLAVSENHILEDVNKCVIAL.....QEKDVDGLDRTAGAIRGRAARVIHVVTSEMD
   8 VDDITSIDDFLAVSENHILEDVNKCVIAL.....QEKDVDGLDRTAGAIRGRAARVIHVVTSEMD
   9 VDEITTIDDFLAVSESHILEDVNRCVMAL.....HQQDPETLDLTANSVKGRSARICTVVNSEML
  10 VDDITSVDDFLSVSENHILEDVNKCVIAL.....QEGDVDTLDRTAGAIRGRAARVIHIINAEME
  11 VDDITSVDDFLSVSENHILEDVNKCVIAL.....QEGDVDTLDRTAGAIRGRAARVIHIINAEME
  12 VDDITSVDDFLSVSENHILEDVNKCVIAL.....QEGDVDTLDRTAGAIRGRAARVIHIINAEME
  13 VDDITSVDDFLSVSENHILEDVNKCVIAL.....QEGDVDTLDRTAGAIRGRAARVIHIINAEME
  14 VDDITSVDDFLSVSENHILEDVNKCVIAL.....QEGDVDTLDRTAGAIRGRAARVIHIINAEME
  15 VDDITTIDDFLAVSENHILEDVNKCVMAL.....QVGDARDLRATAGAIQGRSSRVCNVVEAEMD
  16 VDDITTIDDFLAVSENHILEDVNKCVMAL.....QVGDARDLRATAGAIQGRSSRVCNVVEAEMD
  17 VDEAIDTKSLLDASEEAIKKDLDKCKVAM.....ANMQPQMLVAGATSIARRANRILLVAKREVE
  18 VDEAIDTKSLLDASEEAIKKDLDKCKVAM.....ANMQPQMLVAGATSIARRANRILLVAKREVE
  19 LDNITTLDDFLAVSEAHIVEDCERGIKGIta9deNAANCETVDCAAGSIRGRALRVCDVVDAEMD
  20 VDEAIDTKSLLDASEEAIKKDLDKCKVAM.....ANMQPQMLVAGATSIARRANRILLVAKREVE
  21 LDNITTLDDFLAVSEAHIVEDCERGIKGIta9deNAANCETVDCAAGSIRGRALRVCDVVDAEMD
  22 VDDITSIDDFLAVSESHILEDVNKCIIAL.....RDQDADNLDRAAGAIRGRAARVAHIVTGEMD
  23 CDQATDPADFIKTSEEHMQVYAKLCEDAI.....HARQPQKMVDNTSNIARLINRVLLVAKQEAD
  24 CDQATDPADFIKTSEEHMQVYAKLCEDAI.....HARQPQKMVDNTSNIARLINRVLLVAKQEAD
  25 CDQATDPADFIKTSEEHMQVYAKLCEDAI.....HARQPQKMVDNTSNIARLINRVLLVAKQEAD
  26 VDEAIDTKSLLDASEEAIKKDLDKCKVAM.....ANIQPQMLVAGATSIARRANRILLVAKREVE
  27 VDDAIDTGEFVRASETAMRRYTNHCEGAI.....NGADAHGLVNNSSQIARLGNRVLMTAQNEAD
  28 VDDAIDTGEFVRASETAMRRYTNHCEGAI.....NGADAHGLVNNSSQIARLGNRVLMTAQNEAD
  29 VDEAIDTKSLLDASEEAIKKDLDKCKVAM.....ANIQPQMLVAGATSIARRANRILLVAKREVE
  30 VDEAIDTKSLLDASEEAIKKDLDKCKVAM.....ANIQPQMLVAGATSIARRANRILLVAKREVE
  31 VDDAIDTSDFIRASEQAMRQYTVYCENAI.....RNNEPQQMVDNTSQIARFGNRVLMTAKNEAD
  32 LREISDV----------------------.....-------------------------------
  33 AKE--------------------------.....-------------------------------
  34 AKKIL------------------------.....-------------------------------
  35 LREINDV----------------------.....-------------------------------
  36 LREINDV----------------------.....-------------------------------
  37 -----------------------------.....-------------------------------
  38 LREINDV----------------------.....-------------------------------


         180       190       200       210            220       230    
          |         |         |         |              |         |    
   1 NYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEA.....LSSDPAQPMDENEFIDASRLVYDG
   2 NYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEA.....LSSDPAQPMDENEFIDASRLVYDG
   3 NYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEA.....LSSDPAQPMDENEFIDASRLVYDG
   4 NYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEA.....LSSDPAQPMDENEFIDASRLVYDG
   5 NYMPGVYTEKVLEATKLLTETVMPRFTEQVEAAVEA.....LSANNGQPVDENEFIDASRLVYDG
   6 NYEPGIYTEKVLEATKLLTNTVMPRFTEQVEAAVEA.....LSGDTNQTMDENEFIDASRLVYDG
   7 NYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEA.....LSSDPAQPMDENEFIDASRLVYDG
   8 NYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEA.....LSSDPAQPMDENEFIDASRLVYDG
   9 NYEPGLYTDKVKEAVNILKNEVIPHFSNMVEIAVDA.....LSSQPPKDTEENEFVDASRMVYDG
  10 NYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEA.....LSANVPQPFEENEFIDASRLVYDG
  11 NYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEA.....LSANVPQPFEENEFIDASRLVYDG
  12 NYETGVYTEKVLEATKLLSETVMPRFAEQVEVAIEA.....LSANVPQPFEENEFIDASRLVYDG
  13 NYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEA.....LSANVPQPFEENEFIDASRLVYYG
  14 NYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEA.....LSANVPQPFEENEFIDASRLVYYG
  15 NYEPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGA.....LSNNSNKDVDENDFIDASRLVYDG
  16 NYEPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGA.....LSNNSNKDVDENDFIDASRLVYDG
  17 NSEDPKFREAVKAASDELSKTI-SPMVMDAKAVAGN.....ISDPGLQ----KSFLDSGYRILGA
  18 NSEDPKFREAVKAASDELSKTI-SPMVMDAKAVAGN.....ISDPGLQ----KSFLDSGYRILGA
  19 FLQNSEYTETVKQAVRILKTQRVDQFAERASALANRqe6glTWDPKTKEEEMNEFINACTLVHDA
  20 NSEDPKFREAVKAASDELSKTI-SPMVMDAKAVAGN.....ISDPGLQ----KSFLDSGYRILGA
  21 FLQNSEYTETVKQAVRILKTQRVDQFAERASALANRqe6glTWDPKTKEEEMNEFINACTLVHDA
  22 SYEPGAYTEGVMRNVNFLTSTVIPEFVTQVNVALEA.....LSKSSLNVLDDNQFVDISKKIYDT
  23 NSEDPVFTERLNAAANRLERSL-PAMVGDAKLVATN.....IADPRAA----AAWKNSFQRLLGD
  24 NSEDPVFTERLNAAANRLERSL-PAMVGDAKLVATN.....IADPAAA----AAWKNSFQRLLGD
  25 NSEDPVFTERLNAAANRLERSL-PAMVGDAKLVATN.....IADPAAA----AAWKNSFQRLLGD
  26 NSEDPKFREAVKAASDELSKTI-SPMVMDAKAVAGN.....ISDPDLQ----KSFLDSGYRILGA
  27 NSEEPSFVSRVRNAADQLHNAI-PPMVNNAKQIAQN.....PHDQYAA----QNWRGTNDHLLNS
  28 NSEEPSFVSRVRNAADQLHNAI-PPMVNNAKQIAQN.....PHDQYAA----QNWRGTNDHLLNS
  29 NSEDPKFREAVKAASDELSKTI-SPMVMDAKAVAGN.....ISDPGLQ----KSFLDSGYRILGA
  30 NSEDPKFREAVKAASDELSKTI-SPMVMDAKAVAGN.....ISDPGLQ----KSFLDSGYRILGA
  31 NSEEPSFVHRVNNAARRLHSAI-PPMVNQAKQVALN.....PRHGGNA----QSWRDANEHLLSA
  32 ------------------------------------.....------------------------
  33 ------------------------------------.....------------------------
  34 ------------------------------------.....------------------------
  35 ------------------------------------.....------------------------
  36 ------------------------------------.....------------------------
  37 ------------------------------------.....------------------------
  38 ------------------------------------.....------------------------


         240    
          |    
   1 IRDIRKAVLM
   2 IRDIRKAVLM
   3 IRDIRKAVLM
   4 IRDIRKAVLM
   5 VRDIRKAVLM
   6 VRDIRKAVLM
   7 IRDIRKAVLM
   8 IRDIRKAVLM
   9 VREIRRAVLM
  10 VRDIRKAVLM
  11 VRDIRKAVLM
  12 VRDIRKAVLM
  13 VRDIRKAVLM
  14 VRDIRKAVLM
  15 VREIRRAVLM
  16 VREIRRAVLM
  17 VAKVREAF--
  18 VAKVREAF--
  19 VKDIRHALLM
  20 VAKVREAF--
  21 VKDIRHALLM
  22 IHDIRCSVMM
  23 VREVRDAI--
  24 VREVRDAI--
  25 VREVRDAI--
  26 VAKVREAF--
  27 VRAVGDAI--
  28 VRAVGDAI--
  29 VAKVREAF--
  30 VAKVREAF--
  31 VRQVGDAI--
  32 ----------
  33 ----------
  34 ----------
  35 ----------
  36 ----------
  37 ----------
  38 ----------