(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0093 HI0766, H. influenzae
              10        20        30                 40              50
              |         |         |                  |               |
   1 MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLI.....EPLG....FTWDD.KR....LRRSGL.D
   2 MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLI.....EPLG....FTWDD.KR....LRRSGL.D
   3 ALHVVLYQPEIPANTGNIARTCAATNTTLHLI.....RPLG....FSTDD.KM....LKRAGL.D
   4 ALHVVLYHPEIPANTGNIARTCAATNTTLHLI.....RPLG....FSTDD.KM....LKRAGL.D
   5 MFTIVLYQPEIPPNTGNIIRLCANTGADLHLV.....KPLG....FPLDS.AK....MKRAGL.D
   6 MFTIVLYQPEIPPNTGNIIRLCANTGADLHLV.....KPLG....FPLDS.AK....MKRAGL.D
   7 MFRLLFYTPRIPPNTGNAIRTAAVTGCALHLV.....EPIG....FDLSN.PK....LRRAGL.D
   8 ALHVVLFQPEIPANTGNIARTCAATNTALHLI.....RPLG....FSTDD.KM....LRRAGL.D
   9 MLNIVLYEPEIPPNTGNIIRLCANTGFRLHII.....EPMG....FAWDD.KR....LRRAGL.D
  10 --RVVLHCPDIPQNTGNIGRTCVALGAELILV.....RPLG....FSLAD.KF....VKRAGM.D
  11 ---VVLYNPDIPQNTGNIGRTCIALGAELILV.....RPLG....FSLLD.KF....VKRAGM.D
  12 --RIVLHNPDIPQNTGNIGRTCVALGAELILV.....RPLG....FSLAD.KF....VKRAGM.D
  13 MFRLLFVSPRIAPNTGNAIRTCAATGCELHLV.....EPLG....FDLSE.PK....LRRAGL.D
  14 AINIVLFCPEIPNNTGNIVRSCTAFKANLHLI.....KPYG....FFLND.KR....MVRAGL.N
  15 MVKLVLVNPQIPPNTGNIARTCAATGTELHLV.....GPLG....FELGD.RY....LKRAGL.D
  16 PVLIIIDSITDPHNLGAIIRTAEAFGAQGMVL.....PQRR....VAGIT.ST....VMKVAA.G
  17 -INIVLFCPEIPNNTGNIVRSCTAFKANLHLI.....KPYG....FFLND.KR....MVRAGL.N
  18 PFLLILDGVTDPHNLGACLRSADAAGVHAVIV.....PKDR....SAQLN.AT....AKKVAC.G
  19 PFFLILDELEDPHNLGSIMRTADAVGAHGIVI.....PKRR....AVGLT.TT....VAKAST.G
  20 RLGLVLERLQDPGNLGTILRTAAATGVEGIWL.....TADC....VDPTS.PK....VLRSSA.G
  21 MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIV.....KPIV....FDISQ.KA....VRRAGL.D
  22 PLLLVLDGVTDPHNLGACLRTADAAGAVAVIV.....PKDK....SAQLT.SI....ARKVAC.G
  23 PLLLALDGVTDPHNLGACLRVADGAGAHAVIA.....PRRR....AAGLT.AA....AAKAAN.G
  24 ELRVALYQPDIPGNTGTILRMAACLGFAVDLI.....EPAG....FDISD.RA....LKRAGM.D
  25 ALHIVLVEPEIPANTGNIARTCAATGTHLHLV.....RPLG....FNTDD.KT....LKRAGL.D
  26 -VVVVLHGLEKPGNVGAILRTADAAGAAGVLV.....LGRG....ADPYG.PN....VIRASQ.G
  27 DLTVCMEQVHKPHNVSAIIRTADAVGVHEVHA.....VWPG....SRM--.RT....MASAAA.G
  28 --CVVLDGVQDPGNVGTVLRSAAAAGIGAVIL.....GKGC....ADAWS.PK....VLRAGM.G
  29 --CVVLDGVQDPGNVGTVLRSAAAAGIGAVIL.....GKGC....ADAWS.PK....VLRAGM.G
  30 -TLVMLHEIQDPHNFGAILRTCMAAEVDGIIF.....KKHN....QAPIN.ST....VIRTSM.G
  31 ALLVALDNLSDPRNLGAIVRSVAAFGGHGVLI.....PQRR....SASVT.AV....AWRTSA.G
  32 AFILLLDEIEDPQNFGAILRTAEQFSIDLVIT.....TQKR....SAKDN.ST....VLRTSS.G
  33 MLNIVLFEPEIILNTGNIARMCVGFDANLHLV.....RPYG....FILDK.KRfhkdFIRAST.N
  34 ALVLILDEIEDPRNFGAIIRTANGFGVDAIIY.....KKHH....QASIN.DL....VIKTSM.G
  35 -LTVLMDEVNKPHNLSAIIRTCDAVGVPEAHA.....VPPKhgtlASFEG.HT....YEATSG.S
  36 SFFIVIDHITDPQNVGNLLRTCEVLGGVGALI.....SKDR....TSPIN.ET....VVKASS.G
  37 PFYLIIEQVEKPGNVGAILRIADGAGVDGVIL.....CNPI....VDLYN.PN....VVRSSL.G
  38 QLIAVTVEIREPGNAGTVIRIADAMGAAAVIL.....AGRS....VDPYN.GK....CLRAST.G
  39 -LVAVLAHVRDPGNAGTVLRCADAAGAEAVVL.....TDAS....VDLYN.PK....AVRASV.G
  40 LLHVVLFEPEKAGNVGNVARTCSVLGAELHLI.....RPFG....FHLHD.RE....FRRAVM.D
  41 PFYLIVEQAEKPGNIGALLRIADGAGVDGVIL.....CDPV....VDLYN.PN....VIRSSL.G
  42 PLIVLLDQIQDPHNLGAIVRTSVGAGANGIII.....PKDK....SVKVT.ET....VVKVSA.G
  43 DLIVFADNVKNEHNFSAIVRTCDAVGVLYLYY.....YHAE....-GKKA.KI....NEGITQ.G
  44 MISVILVNPKYSGNVGSIARVMMNFGFEELRI.....VGDK....SIINN.EA....YMMAVH.A
  45 MISVVLVEPEGPANIGMIARTMKNFGFSRLVL.....INPN....--LTE.ES....YAYAVH.A
  46 -TLVMLDEIQDPYNFGAILRTCLASEVDGIIF.....KKNN....QVPIN.NT....VMKTSM.G
  47 -KVLLIDAVQDPGNLGTMIRTADAAGLDAVVL.....GDGT....ADAFN.GK....TLRSAQ.G
  48 RLIVVASLIDKPTNLGGLCRTCEVFGASVLVV.....GSLQ....CISDK.QFq...HLSVSA.E
  49 -TVAVLEGVNDHENLGSIFRNAAGLSVDAVVF.....GTGC....ADPLY.RR....AVRVSM.G
  50 NISVVFVEPETPGNIGFLARAMKNFGLRTLIL.....INPC....-ELED.EA....YYQAMH.A
  51 -NILLLDNIQDPGNLGTILRTCFAFNIKQVIF.....-NNC....VDLYN.PK....TIKASM.G
  52 -CVLALENESNPHNLGGMMRSCAHFGVKGVVV.....QDAA....-LLES.GA....AIRTAE.G
  53 NIRIILTRTSHPANIGSAARAMKTMGLHKLTIv20peHPQS....FKLPE.ES....FILASG.A
  54 MIRVVLVEPEGEYNIGFVARLCKNFLVDELYI.....VNPR....-ANIS.EA....FRFSAG.G
  55 NIRIILTRTSHPANIGSAARAMKTMGLHKLTIv20peHPQS....FKLPE.ES....FILASG.A
  56 ELIVVSSLVDKPPNLGGICRLCDVLGVGLLTV.....QDIK....VKNHP.QF....KNVAVTaD
  57 ELIVVSSLVDKPPNLGGICRLCDVLGVGLLTV.....QDIK....VKNHP.QF....KNVAVTaD
  58 PLIVALDGVTDPRNLGAVVRSVSAFGGHGVVV.....PERR....AAGMT.AG....AWKTSA.G
  59 LLHVVLVSPQIPGNTGCIARTCAASAVGLHLVg14llQPLG....FQVDD.AR....VKRAGG.R
  60 -------EPQGERNVGAIARAMKNMGLEELIL.....VNPR....CDYRSvEA....QTMAVH.A
  61 --VVVLDGVKIVGNIGAIVRTSLALGAAGIVL.....VDSDl...ATIAD.RR....LLRASR.G
  62 SLAVVLVSPKTPGNIGAAARAMLNMGASDLRI.....VAPR....CDYLDsQA....VAMAVH.A
  63 -DVVVLDGVKIVGNIGAIVRTSLALGASGIIL.....VDSDi...TSIAD.RR....LQRASR.G
  64 --------------------------------.....--LG....FSLAD.KF....VKRAGM.D
  65 -KLLVLCGITDVGNIGGIFRSAYCLGMGGVIL.....DFAK....-ELAY.EG....IVRSSL.G
  66 --------TEGAVNLGFVARLAENFEADEIYL.....VSPR....-ASLE.EA....KRYAAR.A
  67 PLLLICDNLRDPGNLGTILRSAAGAGCSKVLL.....TKGC....VDAWE.PK....VLRAGM.G
  68 PITVVCDNIREPNNLGSIIRTCAALPCSQVVV.....THGC....CDPWE.SK....ALRGGC.G
  69 -KLLVLCGITDVRNIGGIFRSAYCLGMDGVIL.....DFAR....EFAY-.EG....IVRSSL.G
  70 --------------------------------.....----....-----.--....-KRAGL.D
  71 YLTFVLEDIFQSQNASATIRTGEILGLSDVHVi....EKKN....KHTLN.PD....V---TL.G
  72 SIRVVLVNTSHPGNIGGAARAMRNMGLSRLYL.....VAPE....DFPSS.EA....VARASG.A
  73 -PVVVLDQPRNLGNAGAVIRLAAGFGATGVVT.....TGTL....-DPWH.PT....VVRGGA.G
  74 --------------------------------.....----....-----.AA....RWVAHG.A


              60          70        80              90            100  
              |           |         |               |              |  
   1 YHEFAEIKRHKTFEAFLES..EKPKRLFALTT.....KGCPAHSQV.KF.....KLGDYLMFGPE
   2 YHEFAEIKRHKTFEAFLES..EKPKRLFALTT.....KGCPAHSQV.KF.....KLGDYLMFGPE
   3 YWEFVNVVYHDSLEELFEA..YKKGKFFFITK.....FGQQPHTSF.DYtdl..DEDYFFVFGRE
   4 YWEFVNVVYHDSLEELFEA..YKKGKFFFITK.....FGQQPHTSF.DYtdl..DEDYFFVFGRE
   5 YHEFASLTVHENFDDCLKA..LAGRRIFALTT.....KGTARPDET.AF.....QKGDVLLFGPE
   6 YHEFASLTVYENFDDCLKA..LAGRRIFALTT.....KGTARPDET.AF.....QKGDVLLFGPE
   7 YHDLASVTVHTSLSEAWNA..LSPARVFAFST.....LANTLFTDV.SY.....QAGDVLMFGPE
   8 YWEFVNIHYYDSLDHFFQQ..NQNGDFYYITK.....FGKRYYTSY.DFsdp..SKEIFFIFGRE
   9 YHEFTAVTRHHDYRAFLEA..ENPQRLFALTT.....KGTPAHSAV.SY.....QDGDYLMFGPE
  10 YWDKLQLTVVDSIEEALHD..VPEDQIFCLST.....KGSASYTEF.SL.....PSSGTYVFGSE
  11 YWDKVNLSVVDSLDEALSG..VDQNKVFCLST.....KGSQYYGDV.SL.....PMDGVYVFGSE
  12 YWERLSLSVVDSLEEALLG..VPKERIFCLTT.....KGSSYYGER.EL.....PLDGTYIFGAE
  13 YHDLASVTVHASLAHAWEA..LSPARVFAFTA.....QATTLFTNV.GY.....RAGDVLMFGPE
  14 CWDKVQMFEHKSWEHFIET..TPPNKAIWLLTksgttTPDQINMQT.DN.....REQLYFVFGQE
  15 YWPYVDLHYHNSCEEFITH..WRGQGGNLLGFsv...TGTVNFWDY.TY.....QSTDWLMMGSE
  16 ALEHFPVARVVNLSRALET..LKESGFWIYGTva...GKQTALHQA.DL.....REPMGLVIGSE
  17 CWDKIQLFEHKSWEHFLQA..TTENKTIWLLTksgdkTPDQICMTN.KL.....PNELYFVFGQE
  18 AAESVPLIRVTNLARTMRM..LQEENIWIVGTag...EADHTLYQS.KM.....TGRLALVMGAE
  19 AIEHIPVARVTNLARTLEE..MKERGIWVVGTda...SAREDFRNM.DG.....NMPLALVIGSE
  20 SSLLLPQQQLQSLPPLLEK..FHTQGLQLIATvp...QATQTLWEI.DF.....QRPTIVIFGSE
  21 YWDKLEPIIWENLEEFLNEnmIYKNRFFFATT.....KSQKAYFDA.EF.....QKNDFLFFGSE
  22 AAETVPLIRVTNLSRTLRD..LQQNHNIWVVGtag..EATETIYQS.KL.....TGPLALVMGAE
  23 AAETVPYLTVINLARALRA..LKNAGIQVIGTad...DATTSLFDI.QL.....DGALALVMGAE
  24 YLEQAALTRHPDWNRFDAW..RKNAGRGLVLLst...KAAIPYTGY.QF.....QENDILLFGRE
  25 YWYAVHIEYHDSFEELQQK..YPEGRFFYTST.....KATKRYCDI.AF.....QDGDFLVFGKE
  26 AVFSVPTAVLGEDAALGWL..AEHNFRTVACTp....DAPADYWDT.PL.....TGRVALLLGTE
  27 SNSWVQVKTHRTIGDAVAH..LKGQGMQILAThls..DNAVDFREI.DY.....TRPTCILMGQE
  28 AHFLSEIYPQADLEIWLVR..YKGRVFATALRe....EKQAVLYGE.DL.....CEPTAWVFGNE
  29 AHFLSEIYPQADLEIWLVR..YKGRVFATALRe....EKQAVLYGE.DL.....CEPTAWVFGNE
  30 TVFYQNLVQVTNLSYAITT..LQKHGFWTVATtlderLKPKDYRQV.DF.....-DKRILLVGNE
  31 AAARIPVARATNLTRTLKG..WADRGVRVIGLda...GGGTALDDV.DG.....TDSLVVVVGSE
  32 ASQYVKKMTVTNINNTINL..LKNYGFWIYTGd....IKGQDINKI.KIn....DKKIALILGNE
  33 HLNALKLYEYDDFNEFINK..NNISGDEIYFFtr...YGTKTPCDY.QYqnii.QHNVYLVFGKE
  34 AINYIYMIEVNNLSNTIKN..LQDEGFWVYATsl...LKSQPYEKV.DY.....ANKTVFIVGNE
  35 AHKWVKVHPHADAVSAVRE..LQAQGFQVLAThls..QRSVDYREP.DY.....TKPTCVLLGAE
  36 AVFHLKISKVSSLSRELKN..FQKMGGWVFAVe....KGGKDIREV.DI.....PLPVALVLGSE
  37 AVFSLPILSI-SREEGKEL..FKQEGWTVFVTsp...RAETMYFSK.NY.....LGPTALVFGSE
  38 SIFAIPVVVAPDVGAAIAD..LRAAGLQVLATav...DGEMALDDA.DRll...AEPTAWLFGPE
  39 SLFHLPVAVGVPVERAVAG..LREAGVRVLAAd....GAGEDDLDT.ELdagtmGGPTAWVFGNE
  40 YLQGVTLHEYAGWSDFQAQ..LPDAARVFAFSt....HATEYHTRA.GF.....KRGDYLLFGPE
  41 TVFTMPVWQ-ASLKEVLDL..VHQQEWQVFTTtp...SAQTFYFDQ.DF.....CQPMVVVFGSE
  42 TVFRARIAVVTNLARTIEE..LKEKGVWTYASd....IDGTPIYEE.DF.....TFPTAFVFGNE
  43 SHKWVFIEKVDNPVQKLLE..FKNRGFQIVATwls..KESVNFREV.DY.....TKPTVLVVGNE
  44 REILDNAKFYNTFDEAIGD..LDFVIATSGAR.....GGDRNLKRV.PIt12evKGNIGIVFGRE
  45 RDVLENALILDSFEKALEL..FDFTVGTTGKP.....GKRFIPHRA.PLm12dyPGEVGIFFGRE
  46 SVFYQNLVQVANLSYTITK..LKEIGFWTVVStldpiWKPIDYRKV.DF.....AKK-ILIVGNE
  47 SHFHIPVVR-RNLPSYVDE..LKAEGVKVYGTal...QNGAPYQEI.PQ.....SESFALIVGNE
  48 QWLPLVEVKPPQLIDYLQQ..KKTEGYTIIGVeqt..AKSLDLTQY.CF.....PEKSLLLLGNE
  49 HALLVPYARAADWPTELMT..LKESGFRLLAM.....TPHGNACKL.PEai6vsHERIALLVGAE
  50 RDIVEGALIYRDLSEMIDS..LEPDFLVGTTGvp...GGSYNVDRI.PLr11rpSSGTFILFGRE
  51 AIFKINFLRFNDSKLALNF..LLKNKFYLIATild..KNAISLNEI.TI.....KQKYCLMVGNE
  52 GAEHVQPITGDNIVNVLDD..FRQAGYTVVTTss...EQGKPLFKT.SL.....PAKMVLVLGQE
  53 ADVLENATIAASLDEALAD..TTIACALTSRR.....REITAPLQT.PRd12nrGEKVALVFGNE
  54 REILEKAKIVNTFDKAIND..VDIKIATSSIA.....DNNGDILRK.SIr10iqGKKIALIFGRE
  55 ADVLENATIAASLDEALAD..TTIACALTSRR.....REITAPLQT.PRd12nrGEKVALVFGNE
  56 RWMPMEEVALDEIASFMKE..KKKEGYTLIGLeqtd.KSVKLDNNF.QF.....PKKSLILLGTE
  57 RWMPMEEVALDEIASFMKE..KKKEGYTLIGLeqtd.KSVKLDNNF.QF.....PKKSLILLGTE
  58 TAARTPVARATNLTRALEQ..YQKAGITVVGLaa...DGEAELGDLaAL.....DGPVVIVVGSE
  59 ----------KTNDSFYKK..RNKDTFKIATIts8enNGYNLMQDF.SY.....RSGDYLLFGSE
  60 KDVLAQAKVVDDLATALGD..RQRIIATSAREri9etPRQALPWLL.AP.....NLKSALVFGRE
  61 YVFSLPVVLADREEAVSFL..RDNDIALMVLDt....DGDLGVKDLgDR.....ADRMALVFGSE
  62 GDLLRSAKIYPTLREALAD..RDLSVGTSARI.....RADLPAPRH.PAqv8reAAAPALVFGPE
  63 YVFSLPVVL-SGREEAIAF..IRDSGMQLMTLka...DGDISVKELgDN.....PDRLALLFGSE
  64 YWERLSLSVVDSLEEALLG..VPKERIFCLTT.....KGSSYYGER.EL.....PLDGTYIFGAE
  65 LMYDLPFSVMPNTLDLINE..LKTSGFLCLGAsm...QGSSQIENL.SL.....-KKCALFLGSE
  66 AWRLDAARVVSNLEEALRG..VSASLCTSSHMsd6alRAPLAPWEA.AEvlaatPGTVAIVFGRE
  67 AHFRMPIINNLEWETVPNY..LPPDTRVYVADn....--CGLYAQA.EMs49wtEAPAAVVIGGE
  68 GQFRVPIRDDVTWDELALT..IPPEAADDCHVf12enNQTIDYADI.--kgl..GAHNLLIIGGE
  69 LMYDLPFSVMPNTLDLINE..LKTSGFLCLGAsm...QGSSQAENL.SL.....-KKCALFLGSE
  70 YWEFVNVVYHDSLEELFEA..YKKGKFFFITK.....FGQQPHTSF.DYtdl..DEDYFFVFGRE
  71 SSQWINLNKYKNAKFAIDR..LKSDGYSIVATsln..PKSINLENL.TI.....NNKMAIFFGTE
  72 TDILDNAQVVATLEEALVG..CTLALGTSARDr12reCAATCLEQV.GQ.....GAEVALVFGRE
  73 LHF-------ATVVERLEV..AGLPPGPLFALd....PEGEDIRGL.EL.....PDDALLAFGSE
  74 GEILDGVQTFATLEQALAD..VDFTVATTARS.....RARFHYYCT.PPe12qwVGQAALVFGRE


           110           120         130       140       150       160
            |             |           |         |         |         |
   1 TRGIPMSILNEMPM....EQKIRIPM.TA.NSRSMNLSNSVAVTVYEAWRQLGYKGAVNLPEVK
   2 TRGIPMSILNEMPM....EQKIRIPM.TA.NSRSMNLSNSVAVTVYEAWRQLGYKGAVNLPEV-
   3 TSGLPKDLIQNN-M....DRCLRLPM.TE.HVRSLNLSNTAAILVYEALRQQNYRD--------
   4 TSGLPKDLIQNN-M....DRCLRLPM.TE.HVRSLNLSNTAAILVYEALRQQNYRD--------
   5 TRGLPADILDSLPA....AQKIRLPM.QP.GSRSMNLSNTVAVILFEAWRQHGY----------
   6 TRGLPADILDSLPA....AQKIRLPM.QP.GSRSMNLSNTVAVILFEAWRQHGY----------
   7 PTGLDAATLADDHI....TQQVRIPM.LS.GRRSLNLSNAAAVAVYEAWRQHGYAG--------
   8 TTGLPKELLAENE-....DRCLRIPM.TE.NVRALNLSNTAAILVYEALRQQSFHG--------
   9 TRGLPASILDALPA....EQKIRIPM.VP.DSRSMNLSNAVSVVVYEAWRQLGYPGA-------
  10 SKGLPKEILKKY-Y....KNCLRIPM.QQ.DIRSLNLATSVGIVLYEVVRQ-------------
  11 SKGLPEDVLKKY-Y....NHCYYLPM.RP.GIRSLNLATTVGVVLFEAVRQNN-----------
  12 SKGLPQTVLDAYS-....SQCLYIPM.IE.GTRSLNLATSVGIVMYEVARQ-------------
  13 PTGLDEATLADTHI....TGQVRIPM.LA.GRRSLNLSNAAAVAVYEAWRQHGFA---------
  14 TKGLPQTLMEQYS-....QNQVRIPI.WN.PVRSINLSNTVACVLYEYAKQNHYFN--------
  15 TDGLPQMMRDLS--....TQLLCIPMpHS.EVRSLNLASSAAIALFEAGRQL------------
  16 GEGLSLLTQKHC--....DHLITIPL.AG.KTPSLNASVAAAISLYEIFRQRGF----------
  17 TKGLPKTIMDNFK-....QNQIRIPI.WN.SVRSINLANAVVCILYEYSKQNQYSN--------
  18 GEGMRRLTREHC--....DELISIPM.AG.SVSSLNVSVATGICLFEAVRQR------------
  19 GKGMGRLVKEKC--....DFLIKLPM.AG.KVTSLNASVAAGLLMYEVYRKRN-----------
  20 GQGLSAPVLELT--....THQVAIPQ.AP.QVESLNVAIAVGVMLYEARRQQ------------
  21 SYGLPMELMQLN-W....ENAITIPM.KS.YGRSLNLATSVGIISYEALRQ-------------
  22 GEGMRRLTREHC--....DQLISIPM.AG.SVSSLNVSVATGVCLFEIVRQR------------
  23 GAGMRRLTREAC--....DEVVRIPL.AG.HVQSLNVSVASGICLFEAVRQR------------
  24 SAGVPEAIHDNA--....DERLLIPM.VR.SARSLNLAVSVAMTTGEALRQI------------
  25 TKGLPPELLAANP-....DSCIRMPM.TD.KVRSLNLSNSAAIIVYE-----------------
  26 HAGLPAEWRAAH--....-QAVRVPM.HG.QADSLNVATAAALVLYEALRQRR-----------
  27 KTGITQEALALA--....DQDIIIPM.IG.MVQSLNVSVASALILYEAQRQRQNAGMYLRE---
  28 GAGVGKAVLDRA--....DKCVRIPM.HD.ATESLNVAMAATICLFEQMRQR------------
  29 GAGVGKAVLDRA--....DKCVRIPM.HD.ATESLNVAMAATICLFEQMRQR------------
  30 DKGLNALLLKNA--....DLKVKIPM.NP.KLNSLNVSVAVGIILF------------------
  31 GKGLSRLVRQNC--....DEVVSIPM.AA.QAESLNASVAAGVVLAEIARQRR-----------
  32 GKGVHKLIKENS--....DFLIRIPT.SG.KIDSLNVSVSTGILIFEIKRQL------------
  33 STGIDHNILKKYP-....HNWIRIPT.SI.NLRSLNIANSVAMGIYEVVRQNNFKDLFKYEPH-
  34 NKGVSPLILKNA--....DQSIRIDM.FG.DVQSLNVGVATGIIL-------------------
  35 KWGVSDEAAEAA--....DANIVIPM.FG.MVQSLNVSVAAATILFEAQRQRLAAGMYEEPQ--
  36 DKGVSKSVLDIS--....DQIVTIPM.KG.KVTSLNVGSAGAIAMWETA---------------
  37 KDGLTEDWFSED--....FSEIALPM.LG.ESDSLNLATSVAAVAYEVVRQR------------
  38 AHGLSAEIAALA--....DHRVHILM.SG.GAESLNVAAAAAICLYESARA-------------
  39 AWGLPEETRALT--....DAVLRVPI.HG.KAESLNLATAAAVCLYASARAQR-----------
  40 SRGLPVWLRDAL--....-PKLKLPQ.PG.RGRSLNLSVAVGAAAFEAGRQ-------------
  41 KDGLSPDWLNGS--....FCNIALPM.LG.KADSLNLSSSVAAVAYEVVRQRSIR---------
  42 GEGIRRLVREKC--....DRVVTIPM.EN.DIDSLNVSVSVGVVLFEAVRQRRMK---------
  43 LQGVSPEIVEIA--....DKKIVIPM.YG.MAQSLNVSVATGIILYEAQRQREEKGMYSRPS--
  44 DDGLRNEEIDKC--....DLLVSIPT.SE.KYPIMNLSHAVAVILYEIY---------------
  45 SIGLKNEELDAM--....DVTLTIPT.SE.EYPVMNLAQAAAVVLYELSKKR------------
  46 DRGVNQLITKNA--....DCRIKIPM.NN.KINSLNVSVALGIILF------------------
  47 GAGVDAALLEKT--....DLNLYVPL.YG.QAESLNVAVAAAILVY------------------
  48 REGIPANLIQQL--....DVCVEIPQ.QG.IIRSLNVHVSGALLIWEYTRQQ------------
  49 GPGLTAAALRIS--....DVRVRIPM.SR.GTDSLNVATAAALAFYERTR--------------
  50 GDGLSNEEIGLC--....DMVVSVPT.SE.EYPIMNITHAAAIIFYELFRDREF----------
  51 GHGLVQTFIDHA--....HIKTMIKM.-N.QTESLNVAVAAAIFLYE-----------------
  52 YEGLPDAARDPN--....DLRVKIDG.TG.NVAGLNISVATGVLLGEWWRQ-------------
  53 TFGLSIEEVQAC--....NRLMTING.NP.DYFSLNLAQAVQVVCYEIFSQT------------
  54 SVGLTREEIFKC--....DFLLYIPA.NP.SYPVLNLSHAVGIVLYEIWKNRE-----------
  55 TFGLSIEEVQAC--....NRLMTING.NP.DYFSLNLAQAVQVVCYEIFSQT------------
  56 AFGIPGTLLSEL--....DLCLEIQQ.FG.VIRSMNIQTATAVIVH------------------
  57 AFGIPGTLLSEL--....DLCLEIQQ.FG.VIRSMNIQTATAVIVH------------------
  58 GKGLSRLVGETC--....DFRVRIPM.PG.GAESLNAGVAAGIVLYEAARR-------------
  59 TSGLPPEALSDCNHepygGGTLRIPM.VEtYVRCLNLSVSVGIALYEASRQLNYEQIE------
  60 DSGLTNEELNQA--....HRFVRIPV.HP.QYPSLNLSQAVMVCTYELY---------------
  61 KGGPSGLFQEAS--....AGTVSIPM.LS.STESLNVSVSVGIALHE-----------------
  62 ETGLINSDLEQC--....QVTVRIPT.-G.DYASLNLAQAVLLVCYEFLQG-------------
  63 KGGPSDLFEEAS--....SASVSIPM.MS.QTESLNVSVSLGIALHER----------------
  64 SKGLSQTVLDAYS-....SQCLYIPM.IE.GTRSLNLATSVGIVMYEVARQ-------------
  65 HEGLSKKILAKM--....DTILSVKM.RR.DFDSLNVSVAAGIL--------------------
  66 SVGLTRGEIALC--....SLYSSIPA.SP.RYPSLNLSNAAAIYLYEVYKAR------------
  67 TYGVSLESLQLAEStg..GKRLLIPV.VP.GVDSLNSAMAASILLFEGKRQL------------
  68 SHGVSEEAYRFLNLvggkGKCIYIPL.AA.GIDSLNVASALTLLLFELRRK-------------
  69 HEGLSKKILAKM--....DAILSVKM.RR.DFDSLNVSVAAGIL--------------------
  70 TSGLPKDLIQNN-M....DRCLRLPM.TE.HVRSLNLSNTAAILVYEALRQQNYRD--------
  71 LTGLSAEVLGAA--....DLYVKIPM.YG.FTQSYNISVAVAIVMYSL----------------
  72 YAGLTNEELQRC--....QFHVHIPS.DP.SFSSLNLAAAVQVLVYEV----------------
  73 RSGLTPELRARA--....DRLVALPM.RP.QVSSYNLATSVAMTLY------------------
  74 DSGLTNEELALA--....DLLTGVPM.QA.DYPSLNLGQAVMVYCYQL----------------