(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • RECJ_ECOLI/382-451
    • RECJ_ERWCH/381-449
    • RECJ_HAEIN/376-445
    • P73518/390-455
    • O32044/370-436
    • O83702/514-575
    • Q9Z7Z0/390-454
    • P94659/317-381
    • O84453/389-453
    • Q9ZD22/386-452
    • Q9ZMA0/338-403
    • O67909/370-434
    • Y371_MYCGE/252-315
    • O51269/507-572
    • Q9ZM41/283-342
    • O67552/249-312
    • O51564/262-322
    • O83450/285-343
    • P71615/275-333
    • MGPA_MYCPN/261-317
    • MGPA_MYCGE/296-360
    • O31824/247-305
    • YG33_METJA/394-461
    • O58017/401-472
    • O28250/387-458
    • Y988_METJA/239-310
    • O73979/249-318
    • Y977_METJA/396-466
    • O26266/371-441
    • O57804/392-465
    • O29523/379-449
    • O27473/379-449
    • O29559/362-431
    • Y831_METJA/355-424
    • YYBT_BACSU/588-647
    • O66728/230-290
    • O58035/847-912
    • SYA_ARCFU/831-899
    • O67323/793-863
    • SYA_THIFE/800-870
    • SYA_ECOLI/799-869
    • SYA_BACSU/801-872
    • SYA_HAEIN/798-868
    • SYA_BARBA/810-882
    • SYA_SYNY3/797-870
    • Q9ZCA4/802-873
    • SYA_METJA/829-887
    • Q9Z714/793-865
    • O84754/846-917
    • O57734/333-400
    • SYAC_SCHPO/881-951
    • SYAC_YEAST/877-950
    • SYA_METTH/817-891
    • SYA_THETH/808-882
    • SYA_MYCTU/821-895
    • O01541/890-961
    • SYA_HUMAN/886-957
    • SYA_BOMMO/889-960
    • SYA_HELPY/772-839
    • SYA_ARATH/923-996
    • RECJ_ECOLI/382-451
    • RECJ_ERWCH/381-449
    • RECJ_HAEIN/376-445
    • P73518/390-455
    • O32044/370-436
    • O83702/514-575
    • Q9Z7Z0/390-454
    • P94659/317-381
    • O84453/389-453
    • Q9ZD22/386-452
    • Q9ZMA0/338-403
    • O67909/370-434
    • Y371_MYCGE/252-315
    • O51269/507-572
    • Q9ZM41/283-342
    • O67552/249-312
    • O51564/262-322
    • O83450/285-343
    • P71615/275-333
    • MGPA_MYCPN/261-317
    • MGPA_MYCGE/296-360
    • O31824/247-305
    • YG33_METJA/394-461
    • O58017/401-472
    • O28250/387-458
    • Y988_METJA/239-310
    • O73979/249-318
    • Y977_METJA/396-466
    • O26266/371-441
    • O57804/392-465
    • O29523/379-449
    • O27473/379-449
    • O29559/362-431
    • Y831_METJA/355-424
    • YYBT_BACSU/588-647
    • O66728/230-290
    • O58035/847-912
    • SYA_ARCFU/831-899
    • O67323/793-863
    • SYA_THIFE/800-870
    • SYA_ECOLI/799-869
    • SYA_BACSU/801-872
    • SYA_HAEIN/798-868
    • SYA_BARBA/810-882
    • SYA_SYNY3/797-870
    • Q9ZCA4/802-873
    • SYA_METJA/829-887
    • Q9Z714/793-865
    • O84754/846-917
    • O57734/333-400
    • SYAC_SCHPO/881-951
    • SYAC_YEAST/877-950
    • SYA_METTH/817-891
    • SYA_THETH/808-882
    • SYA_MYCTU/821-895
    • O01541/890-961
    • SYA_HUMAN/886-957
    • SYA_BOMMO/889-960
    • SYA_HELPY/772-839
    • SYA_ARATH/923-996
    • gi|9656991|gb|AAF95560.1|_385:454 (AE004311) single-stranded-DNA-specific exonuclease RecJ [Vibrio cholerae] (Vibrio cholerae)
    • gi|7500106|pir||T29466_889:958 hypothetical protein F28H1.3 - Caenorhabditis elegans (Caenorhabditis elegans)
    • gi|1938531|gb|AAB52339.1| (U97013) Similar to aminoacyl-tRNA synthetase; coded for by C. elegans cDNA yk126g5.3; coded for by C. elegans cDNA yk178b12.5; coded for by C. elegans cDNA yk120a6.5; coded for by C. elegans cDNA yk69h7.5; coded for by C. elegans cDNA yk126g5.5; coded> (Caenorhabditis elegans)
                    10        20           30         40         50    
                    |         |            |          |          |    
   1 .....HRPVIAFA.-PAGDGTLKGSGRSIQ.G.LHM.R--DAL.ERLDTLYPGMMLKFG.GHAMA
   2 .....HRPVIAFA.-PAGDGILKGSGRSIA.G.L--.-HLHAL.ERLDTCHPGLMLKFG.GHAMA
   3 .....HRPVIAFA.-QDSEGILKGSARSIE.G.LHM.R--DVL.ERIHSQHPNMILKFG.GHAMA
   4 g....-RPAILLN.-TQDGKIAKGSARSVA.-.---.-NIDLY.ALLHSQRHLM-LGFG.GHPFA
   5 y....-RPAIVLG.IDEEKGIAKGSARSIR.-.---.-GFNLF.ESLSECRDIL-PHFG.GHPMA
   6 v....------II.CIMADGHAVGSLRSAR.-.---.-GYHLF.SLLDPLADLF-SDYG.GHAFA
   7 n....-KPVVIIA.--IQRGIGKGSARTIG.-.---.-SFPLL.GVLKKCSSLL-LSYG.GHDFA
   8 nk...--PVAII-.-SNQGGVGKGSLRTIG.-.---.-SFPLL.GILQKCSSLF-ISYG.GHDFA
   9 n....-KPVAIIA.--LQDGIGKGSLRTIG.-.---.-SFPLL.GVLRKCESFF-LSYG.GHDFA
  10 .....DKPVVVVA.--LNNGIGKASCRSIL.-.---.-GIDFSaEIINAKSKDLIISGG.GHAMA
  11 qkps.------LV.FTFKEGVYKGSARSSP.-.---.-NIDLI.DALNGVSSLL-LGYG.GHRQA
  12 .....NKPVAVFS.--KGKTKAVGSIRSIE.-.---.-SIDVY.DKVSTMRDMF-LKWG.GHDKA
  13 kgv..-KIWTTVY.FNESIKKWIGSIRSRN.-.---.--IPIN.NFAQM------FNGG.GHKYA
  14 qkv..-----AIF.LTKQDNIIKGSIRSNN.-.---.-KINSK.TLISIIPSHLVINSG.GHKAA
  15 fyi..--------.--DVNSKGNVSLRANG.-.---.-NCDVC.ELSQMC-----FNGG.GHRNA
  16 egv..-KVAYALI.EKPEEGVWKVSLRAKG.-.---.-NVNVG.KIAER------LGGG.GHKYA
  17 ne...---ILGIL.KEMEDGSIIVGLRSKD.-.---.-SFDVG.KLAED------FGGG.GHKNA
  18 e....---AIVVV.RQESPTHCSVGFRSRG.-.---.-SIDVS.VIAAR------FGGG.GHRCA
  19 aev..----AAVF.KEVEPHRWSVSMRAKT.-.---.--VNLA.AVASG------FGGG.GHRLA
  20 h....---IWLFF.IEEGKNHYRVEFRSNG.-.---.--INVR.EVALK------YGGG.GHIQA
  21 yk...---IWLFF.IEQANNEIRIDLRSNG.-.---.--INVR.DIAIK------YGGG.GHNNA
  22 l12sk--------.--------RVSLRTIH.-.---.DYIDVS.EIAGR------YGGG.GHAKA
  23 ist..-----TFV.FGIVGDEIHISARTKD.-.---.LRLNLG.EILNKA-----FGGG.GHQTA
  24 it...----TVLV.FGIVDDRIEISARTRD.-.---.VRVNIG.NVMKEAFGEI-GSGG.GHPQA
  25 is...----TVVV.FGVIKDTVYVSARNKD.-.---.VRIHMG.EVLRRAFGDV-GSAG.GHAHA
  26 ad...--VAFVVA.VRKKEKEIRVSARCRK.-.HVS.KYVHLG.NLMEKIGKELGGSGG.GHSEA
  27 adv..------AI.VGSEKDGVRISARAKD.Y.LVK.QGLHLG.KIMEKVGPIIKGSGG.GHAGA
  28 mkp..-----IFA.ITEDENGYKVSARCPK.L.LCFaEDVNLA.KAIKYASEKVNGSGG.GHKFA
  29 rrpm.----IGLG.--ETADGLKVSLRCSR.L.LAF.DGIHFG.SIMRRVAEKVGGSGG.GHATA
  30 e....-KPVIVFAdTDEDPNLIKGSARTTE.K.ALE.RGYHLG.EALRKAAEIIGGEGG.GHAIA
  31 .....EKPIIAFA.--ESDKGVKVSARATY.R.LVE.RGVHLA.KALKRAAEAVGGVGG.GHSVA
  32 dip..-----LLG.LSRMDQHVKVSARTTR.P.AVE.RGVNLG.VALRDAAASFGGTGG.GHDIA
  33 .....DKPLIVVN.--IKNEYAKVSARTNE.A.LAE.R-VDLA.EVMRLAAEKVGGRGG.GHRVA
  34 .....DKPVIGYH.--IEGDIAKFSARGNR.D.LVN.RGLNLS.VAMAV-AKEFGGNGG.GHDVA
  35 easfa-------V.ARRDEQTVCISARSLG.-.---.-EVNVQ.IIMEA------LEGG.GHLTN
  36 sda..-----FFV.IIEAEGKTYVFGRSQS.-.---.EDVDVG.EILSH------FGGG.GHREA
  37 kr...-----VVV.LISRDGYFAVSVGSEV.-.---.-GVEAN.ELAKKITLIAGGGGG.GRRDI
  38 .....EKGAVGCL.MAKGEGKVFVVTFSGQ.-.---.-KYDAR.ELLREIGRVAKGSGG.GRKDV
  39 kd...----VVFI.ASRKGDKINFVIGVSK.E.ISD.K-VNAK.EVIREVGKVLKGGGG.GRADL
  40 dgv..-----IVL.AGVEREKVALIAGVGK.G.LTG.R-VHAG.ELVNTVAQPLGGKGG.GRPEL
  41 st...----IIVL.ATVVEGKVSLIAGVSK.D.VTD.R-VKAG.ELIGMVAQQVGGKGG.GRPDM
  42 sa...----VIVL.GAVQNDKVNISAGVTK.D.LIE.KGLHAG.KLVKQAAEVCGGGGG.GRPDM
  43 sgv..-----IAF.ASILDEKVNLVVGVTN.D.LTA.K-IKAG.ELVNLMAQQVGGKGG.GRPDM
  44 sg...---VVAFI.SVSEDGKGSAVVGVTD.D.LTD.T-LNAV.DLVRIISVTLGGQGGgGRRDM
  45 es...--AVVLAS.IPEEGKVSLVAAFSPQ.L.VKT.KQLKAG.QFIGAIAKICGGGGG.GRPNL
  46 n....---LIVVY.IAHGVDKLSITVAVSK.A.ITD.K-FNAG.IIAKELSLFLGGSGGgGQASI
  47 na...----IVVL.LNDKGNILCKRGENVD.-.---.--IKMN.ELIRYI-----AKGG.GREHL
  48 ek...---LISLW.TTEKNGKYIVLSRVSD.D.LIT.QGVHAQ.DLLKAVLTPCGGRWG.GKDQS
  49 nf...----ISLW.ITEKNGRYIVLSRVSD.D.LTK.RGVQAH.TLLAELLAPYGGRCG.GKAIS
  50 sn7ll--------.---ANEKYVLFAKNEG.-.---.VPVSMR.ELLKEVIDELGGKGG.GTDNL
  51 .....DKSIYLLA.--SDDTKVAHACLVSP.E.AMK.K-LTPQ.EWSQKVCHSIGGRSG.GKGDT
  52 .....DKSIYLLA.GNDPEGRVAHGCYISN.A.ALA.KGIDGS.ALAKKVSSIIGGKAG.GKGNV
  53 lelsa----TVDA.VVLANPEGKIVGAASE.D.AVK.AGLRIN.EVISQAAAVLGGGGG.GRPHL
  54 d22lk--------.-------------LSP.K.AQG.MGLEAG.ALFRALAEKAGGRGG.GKGAL
  55 s....EPAVVALI.AEGESQTVPYAVAANP.A.AQD.LGIRAN.DLVKQLAVAVEGRGG.GKADL
  56 a....---VMAFS.VNEDSGKVLCLAKVDK.S.LVS.NGLKAN.EWVNEVCTVLGGKGG.GKDAN
  57 s....---AMLFT.VDNEAGKITCLCQVPQ.N.AAN.RGLKAS.EWVQQVSGLMDGKGG.GKDVS
  58 a....---AMFFS.VDKDADKIYCLAAVPK.S.DVE.KGLLAS.EWVQSVVDIIGGKGG.GKAES
  59 rll..-----AMV.FKKENERITLACGVKN.-.---.APIKAN.VWANEVAQILGGKGG.GRGDF
  60 s....---IMVFS.TDESTNKAVVCAGVPEkS.DQF.KPLDVT.EWLTTALGPLKGRCGkGKGGL
  61 .....HRPVIAFA.-PAGDGTLKGSGRSIQ.G.LHM.R--DAL.ERLDTLYPGMMLKFG.GHAMA
  62 .....HRPVIAFA.-PAGDGILKGSGRSIA.G.L--.-HLHAL.ERLDTCHPGLMLKFG.GHAMA
  63 .....HRPVIAFA.-QDSEGILKGSARSIE.G.LHM.R--DVL.ERIHSQHPNMILKFG.GHAMA
  64 g....-RPAILLN.-TQDGKIAKGSARSVA.-.---.-NIDLY.ALLHSQRHLM-LGFG.GHPFA
  65 y....-RPAIVLG.IDEEKGIAKGSARSIR.-.---.-GFNLF.ESLSECRDIL-PHFG.GHPMA
  66 v....------II.CIMADGHAVGSLRSAR.-.---.-GYHLF.SLLDPLADLF-SDYG.GHAFA
  67 n....-KPVVIIA.--IQRGIGKGSARTIG.-.---.-SFPLL.GVLKKCSSLL-LSYG.GHDFA
  68 nk...--PVAII-.-SNQGGVGKGSLRTIG.-.---.-SFPLL.GILQKCSSLF-ISYG.GHDFA
  69 n....-KPVAIIA.--LQDGIGKGSLRTIG.-.---.-SFPLL.GVLRKCESFF-LSYG.GHDFA
  70 .....DKPVVVVA.--LNNGIGKASCRSIL.-.---.-GIDFSaEIINAKSKDLIISGG.GHAMA
  71 qkps.------LV.FTFKEGVYKGSARSSP.-.---.-NIDLI.DALNGVSSLL-LGYG.GHRQA
  72 .....NKPVAVFS.--KGKTKAVGSIRSIE.-.---.-SIDVY.DKVSTMRDMF-LKWG.GHDKA
  73 kgv..-KIWTTVY.FNESIKKWIGSIRSRN.-.---.--IPIN.NFAQM------FNGG.GHKYA
  74 qkv..-----AIF.LTKQDNIIKGSIRSNN.-.---.-KINSK.TLISIIPSHLVINSG.GHKAA
  75 fyi..--------.--DVNSKGNVSLRANG.-.---.-NCDVC.ELSQMC-----FNGG.GHRNA
  76 egv..-KVAYALI.EKPEEGVWKVSLRAKG.-.---.-NVNVG.KIAER------LGGG.GHKYA
  77 ne...---ILGIL.KEMEDGSIIVGLRSKD.-.---.-SFDVG.KLAED------FGGG.GHKNA
  78 e....---AIVVV.RQESPTHCSVGFRSRG.-.---.-SIDVS.VIAAR------FGGG.GHRCA
  79 aev..----AAVF.KEVEPHRWSVSMRAKT.-.---.--VNLA.AVASG------FGGG.GHRLA
  80 h....---IWLFF.IEEGKNHYRVEFRSNG.-.---.--INVR.EVALK------YGGG.GHIQA
  81 yk...---IWLFF.IEQANNEIRIDLRSNG.-.---.--INVR.DIAIK------YGGG.GHNNA
  82 l12sk--------.--------RVSLRTIH.-.---.DYIDVS.EIAGR------YGGG.GHAKA
  83 ist..-----TFV.FGIVGDEIHISARTKD.-.---.LRLNLG.EILNKA-----FGGG.GHQTA
  84 it...----TVLV.FGIVDDRIEISARTRD.-.---.VRVNIG.NVMKEAFGEI-GSGG.GHPQA
  85 is...----TVVV.FGVIKDTVYVSARNKD.-.---.VRIHMG.EVLRRAFGDV-GSAG.GHAHA
  86 ad...--VAFVVA.VRKKEKEIRVSARCRK.-.HVS.KYVHLG.NLMEKIGKELGGSGG.GHSEA
  87 adv..------AI.VGSEKDGVRISARAKD.Y.LVK.QGLHLG.KIMEKVGPIIKGSGG.GHAGA
  88 mkp..-----IFA.ITEDENGYKVSARCPK.L.LCFaEDVNLA.KAIKYASEKVNGSGG.GHKFA
  89 rrpm.----IGLG.--ETADGLKVSLRCSR.L.LAF.DGIHFG.SIMRRVAEKVGGSGG.GHATA
  90 e....-KPVIVFAdTDEDPNLIKGSARTTE.K.ALE.RGYHLG.EALRKAAEIIGGEGG.GHAIA
  91 .....EKPIIAFA.--ESDKGVKVSARATY.R.LVE.RGVHLA.KALKRAAEAVGGVGG.GHSVA
  92 dip..-----LLG.LSRMDQHVKVSARTTR.P.AVE.RGVNLG.VALRDAAASFGGTGG.GHDIA
  93 .....DKPLIVVN.--IKNEYAKVSARTNE.A.LAE.R-VDLA.EVMRLAAEKVGGRGG.GHRVA
  94 .....DKPVIGYH.--IEGDIAKFSARGNR.D.LVN.RGLNLS.VAMAV-AKEFGGNGG.GHDVA
  95 easfa-------V.ARRDEQTVCISARSLG.-.---.-EVNVQ.IIMEA------LEGG.GHLTN
  96 sda..-----FFV.IIEAEGKTYVFGRSQS.-.---.EDVDVG.EILSH------FGGG.GHREA
  97 kr...-----VVV.LISRDGYFAVSVGSEV.-.---.-GVEAN.ELAKKITLIAGGGGG.GRRDI
  98 .....EKGAVGCL.MAKGEGKVFVVTFSGQ.-.---.-KYDAR.ELLREIGRVAKGSGG.GRKDV
  99 kd...----VVFI.ASRKGDKINFVIGVSK.E.ISD.K-VNAK.EVIREVGKVLKGGGG.GRADL
 100 dgv..-----IVL.AGVEREKVALIAGVGK.G.LTG.R-VHAG.ELVNTVAQPLGGKGG.GRPEL
 101 st...----IIVL.ATVVEGKVSLIAGVSK.D.VTD.R-VKAG.ELIGMVAQQVGGKGG.GRPDM
 102 sa...----VIVL.GAVQNDKVNISAGVTK.D.LIE.KGLHAG.KLVKQAAEVCGGGGG.GRPDM
 103 sgv..-----IAF.ASILDEKVNLVVGVTN.D.LTA.K-IKAG.ELVNLMAQQVGGKGG.GRPDM
 104 sg...---VVAFI.SVSEDGKGSAVVGVTD.D.LTD.T-LNAV.DLVRIISVTLGGQGGgGRRDM
 105 es...--AVVLAS.IPEEGKVSLVAAFSPQ.L.VKT.KQLKAG.QFIGAIAKICGGGGG.GRPNL
 106 n....---LIVVY.IAHGVDKLSITVAVSK.A.ITD.K-FNAG.IIAKELSLFLGGSGGgGQASI
 107 na...----IVVL.LNDKGNILCKRGENVD.-.---.--IKMN.ELIRYI-----AKGG.GREHL
 108 ek...---LISLW.TTEKNGKYIVLSRVSD.D.LIT.QGVHAQ.DLLKAVLTPCGGRWG.GKDQS
 109 nf...----ISLW.ITEKNGRYIVLSRVSD.D.LTK.RGVQAH.TLLAELLAPYGGRCG.GKAIS
 110 sn7ll--------.---ANEKYVLFAKNEG.-.---.VPVSMR.ELLKEVIDELGGKGG.GTDNL
 111 .....DKSIYLLA.--SDDTKVAHACLVSP.E.AMK.K-LTPQ.EWSQKVCHSIGGRSG.GKGDT
 112 .....DKSIYLLA.GNDPEGRVAHGCYISN.A.ALA.KGIDGS.ALAKKVSSIIGGKAG.GKGNV
 113 lelsa----TVDA.VVLANPEGKIVGAASE.D.AVK.AGLRIN.EVISQAAAVLGGGGG.GRPHL
 114 d22lk--------.-------------LSP.K.AQG.MGLEAG.ALFRALAEKAGGRGG.GKGAL
 115 s....EPAVVALI.AEGESQTVPYAVAANP.A.AQD.LGIRAN.DLVKQLAVAVEGRGG.GKADL
 116 a....---VMAFS.VNEDSGKVLCLAKVDK.S.LVS.NGLKAN.EWVNEVCTVLGGKGG.GKDAN
 117 s....---AMLFT.VDNEAGKITCLCQVPQ.N.AAN.RGLKAS.EWVQQVSGLMDGKGG.GKDVS
 118 a....---AMFFS.VDKDADKIYCLAAVPK.S.DVE.KGLLAS.EWVQSVVDIIGGKGG.GKAES
 119 rll..-----AMV.FKKENERITLACGVKN.-.---.APIKAN.VWANEVAQILGGKGG.GRGDF
 120 s....---IMVFS.TDESTNKAVVCAGVPEkS.DQF.KPLDVT.EWLTTALGPLKGRCGkGKGGL
 121 .....DPDIPLLG.LSRMDQHVKVSARTTR.P.AVE.RGVNLG.VALRDAAASFGGTGG.GHDIA
 122 .....YRPAIVLG.IDEEKGIAKGSARSIR.-.---.-GFNLF.ESLSECRDIL-PHFG.GHPMA
 123 .....HRPVIAFA.-QDSEGILKGSARSIE.G.LHM.R--DVL.ERIHSQHPNMILKFG.GHAMA
 124 .....HRPVIAFA.-EGGDGKLKGSCRSVP.G.LHM.R--DAL.DKIDTQNPGIILKFG.GHAMA
 125 .....--KLISLW.TTEKNGKYIVLSRVSD.D.LIT.QGVHAQ.DLLKAVLTPCGGRWG.GKDQS
 126 .....-SAAMFFS.VDKDADKIYCLAAVPK.S.DVE.KGLLAS.EWVQSVVDIIGGKGG.GKAES
 127 .....NKPVAIIS.--NQGGVGKGSLRTIG.-.---.-SFPLL.GILQKCSSLF-ISYG.GHDFA
 128 .....NKPVAIIA.--LQDGIGKGSLRTIG.-.---.-AFPLL.GVLRKCESFF-LSYG.GHDFA
 129 .....EKPVIVFAdTDEDPNLIKGSARTTE.K.ALE.KGYHLG.EALKKAAEMIGGEGG.GHAIA
 130 .....NKPVAIIS.--NQGGVGKGSLRTIG.-.---.-SFPLL.GILQKCSSLF-ISYG.GHDFA
 131 .....--KDVVFI.ASRKGDKINFVIGVSK.E.ISD.K-VNAK.EVIREVGKVLKGGGG.GRADL
 132 .....HRPVIAFA.-PAGDGTLKGSGRSIQ.G.LHM.R--DAL.ERLDTLYPGMMLKFG.GHAMA
 133 .....DKPVIGYH.--IEGDIAKFSARGNR.D.LVN.RGLNLS.VAMAV-AKEFGGNGG.GHDVA
 134 .....HRPVIAFA.-PAGDGTLKGSGRSIQ.G.LHM.R--DAL.ERLDTLYPGMMLKFG.GHAMA
 135 .....---FISLW.VTEKNDRYIVLVRVSD.D.LVK.QGIDAQ.ALLEELLAPYGGRCG.GKAVS
 136 .....----VVFI.ASKKEGKINFVIASSK.G.ISK.E-VRAN.ELIRQVGKVLKGGGG.GREDL
 137 .....EKPIIAFA.--ESDKGVKVSARATY.R.LVE.RGVHLA.KALKRAAEAVGGVGG.GHSVA
 138 .....-KAVMAFS.VNEDSGKVLCLAKVDK.S.LVS.NGLKAN.EWVNEVCTVLGGKGG.GKDAN
 139 .....NKPVAVFS.--KGKTKAVGSIRSIE.-.---.-SIDVY.DKVSTMRDMF-LKWG.GHDKA
 140 .....DKSIYLLA.--SDDTKVAHACLVSP.E.AMK.K-LTPQ.EWSQKVCHSIGGRSG.GKGDT
 141 .....HRPVIAFA.-PAGDGILKGSGRSIA.G.L--.-HLHAL.ERLDTCHPGLMLKFG.GHAMA
 142 .....------AI.VGSEKDGVRISARAKD.Y.LVK.KGLHLG.KLMEKVGPIIGGSGG.GHPGA
 143 .....NKPVAIIA.--LQDGIGKGSLRTIG.-.---.-SFPLL.GVLRKCESFF-LSYG.GHDFA
 144 .....EKPVIVFAdTDEDPNLIKGSARTTE.K.ALE.RGYHLG.EALRKAAEIIGGEGG.GHAIA
 145 .....NKPVVIIA.--IQRGIGKGSARTIG.-.---.-SFPLL.GVLKKCSSLL-LSYG.GHDFA
 146 .....---AYALI.EKPEEGVWKVSLRAKG.-.---.-NVNVG.KIAER------LGGG.GHKYA
 147 .....--SAMLFT.VDNEAGKITCLCQVPQ.N.AAN.RGLKAS.EWVQQVSGLMDGKGG.GKDVS
 148 .....DKPVVVVA.--LNNGIGKASCRSIL.-.---.-GIDFSaEIINAKSKDLIISGG.GHAMA
 149 .....DKSIYLLA.GNDPEGRVAHGCYISN.A.ALA.KGIDGS.ALAKKVSSIIGGKAG.GKGNV
 150 .....DKSIYLLA.GNDPEGRVAHGCYISN.A.ALA.KGIDGS.ALAKKVSSIIGGKAG.GKGNV
 151 .....--AAMFLS.VDADSKKIFCLSSVPK.S.AVE.KGLKAN.EWVQHVSATLGGKGG.GKPES
 152 .....--PMIGLG.--ETADGLKVSLRCSR.L.LAF.DGIHFG.SIMRRVAEKVGGSGG.GHATA
 153 .....---FISLW.ITEKNGRYIVLSRVSD.D.LTK.RGVQAH.TLLAELLAPYGGRCG.GKAIS
 154 .....--AAMFLS.VDADSKKIFCLSSVPK.S.AVE.KGLKAN.EWVQHVSATLGGKGG.GKPES
 155 .....------AI.VGSEKDGVRISARAKD.Y.LVK.QGLHLG.KIMEKVGPIIKGSGG.GHAGA
 156 .....---FISLW.ITEKNGRYIVLSRVSD.D.LTK.RGVQAH.TLLAELLAPYGGRCG.GKAIS
 157 .....---VIAFA.-SILDEKVNLVVGVTN.D.LTA.K-IKAG.ELVNLMAQQVGGKGG.GRPDM
 158 .....----IIML.GNVAEGKVGLIAGVTN.D.LTN.K-VKAG.ELVNMVALQVGGKGG.GRPDM
 159 .....--IWTTCY.FNEDIKKWIGSIRSRS.-.---.--IPIN.NFAQM------FGGG.GHKYA
 160 .....--NAVILL.AAVNDGKVSLCAGVSK.P.LTG.K-VKAG.DLVKFAAEQVGGKGG.GRPDL
 161 .....-RPTIVFA.-PADNGEVRGSGRSIP.N.LHL.R--DAL.DLVSKRHPDLILKFG.GHAMA
 162 .....-RPTIVFA.-PADNGEVRGSGRSIP.N.LHL.R--DAL.DLVSKRHPDLILKFG.GHAMA
 163 .....-RPTIVFA.-PADNGEVRGSGRSIP.N.LHL.R--DAL.DLVSKRHPDLILKFG.GHAMA
 164 .....---AVIVL.GAVQNDKVNISAGVTK.D.LIE.KGLHAG.KLVKQAAEVCGGGGG.GRPDM
 165 .....---TIIVL.ATVVEGKVSLIAGVSK.D.VTD.R-VKAG.ELIGMVAQQVGGKGG.GRPDM
 166 .....----IVIL.FSKFENKVSLVVKVSE.N.LLG.K-YDAS.SIARNIAKELGGNGG.GRKNF
 167 .....--NAVILL.AAVNDGKVSLCAGVSK.P.LTG.K-VKAG.DLVKFAAEQVGGKGG.GRPDL
 168 .....---AVILL.IQVKDEKITLAAGVKD.-.---.VPLKAG.ALVKEAAQILGGNGG.GRDDF
 169 .....NKPAFVFS.--QNEEHLKGSARSVG.-.---.-KIDIL.ALISKTNSIL-SNYG.GHKGA
 170 .....----VAIF.LTKQDNIIKGSIRSNN.-.---.-KINSK.TLISIIPSHLVINSG.GHKAA
 171 .....----PIFA.ITEDENGYKVSARCPK.L.LCFaEDVNLA.KAIKYASEKVNGSGG.GHKFA
 172 .....---VAVLF.MEFPRGKIHVSMRSKD.-.---.-WFNVN.EVAFE------LGGG.GHPRA
 173 .....NQDTLFIS.FNLDDNKIQYLLAINE.KfATT.NQINLN.KYIKELNTISNGKGG.GKPYF
 174 .....-EKLLAIV.FKKENERITLACGVKN.-.---.VPIKAN.AWANEVAQILGGKGG.GRDDF
 175 .....EPAVVALI.AEGESQTVPYAVAANP.A.AQD.LGIRAN.DLVKQLAVAVEGRGG.GKADL
 176 .....--IWFIVY.FDENTNTYKVSLRSNK.-.---.--YKVR.LVASQ------FNGG.GHDLA
 177 .....---VIICI.--MADGHAVGSLRSAR.-.---.-GYHLF.SLLDPLADLF-SDYG.GHAFA
 178 .....DKPLIVVN.--IKNEYAKVSARTNE.A.LAE.R-VDLA.EVMRLAAEKVGGRGG.GHRVA
 179 .....--IWTTVY.FNESIKKWIGSIRSRN.-.---.--IPIN.NFAQM------FNGG.GHKYA
 180 .....---TIIVL.ATVVEGKVSLIAGVSK.D.VTD.R-VKAG.ELIGMVAQQVGGKGG.GRPDM
 181 .....---TIIVL.ATVVEGKVSLIAGVSK.D.VTD.R-VKAG.ELIGMVAQQVGGKGG.GRPDM
 182 .....-ERLLAMV.FKKENERITLACGVKN.-.---.APIKAN.VWANEVAQILGGKGG.GRGDF
 183 .....EKGAVGCL.MAKGEGKVFVVTFSGQ.-.---.-KYDAR.ELLREIGRVAKGSGG.GRKDV
 184 .....-SAVVLAS.IPEEGKVSLVAAFSPQ.L.VKT.KQLKAG.QFIGAIAKICGGGGG.GRPNL


          60        70          
          |         |          
   1 AGLSLEE-DKFKLFQQRF--ge....
   2 AGLSLVE-DRFDEFRQRF--ad....
   3 AGLSIRE-EHFADFQHIFNQ......
   4 AGLSLPL-DKLPLFTEAVN-q.....
   5 AGMTLKA-EDVPDLRSRLNE......
   6 AGFSIPS-ERIPQLLHR---mel...
   7 AGVIMKE-DKVEDFKKKFV-h.....
   8 AGIIINE-DQVEAFRKKFI-h.....
   9 AGLMIKE-DQVEGFRKKFI-h.....
  10 AGFTATA-SKLQELQDFLND......
  11 CGLSVGK-NNIVSLFET---lenf..
  12 MGLTLPS-NRLEEFREKVNQ......
  13 AAFVLDEKNQFMKLVQIMDD......
  14 AGFTLHE-NLLEDFIKE---ley...
  15 SGGKIDG-------------f16ee.
  16 SGAKIKT-NSYEEALKKLLE......
  17 SGFRIKQ-GSLEIVKN----rmla..
  18 AGLRIE--GTVDELLPRF--va....
  19 AGYTTT--GSIDDAV-----aslra.
  20 SGAVLKSKRDI---------ir6qd.
  21 SGAIITNKKQISDVVSD---cv7vy.
  22 SGCSITD-EVYELFVA----eafr..
  23 AAAKIP--------------l19ee.
  24 GGARIP--------------l19ee.
  25 AGAQIP--------------l19te.
  26 GGLNAP--------------y13ke.
  27 AGANGK--ENLDEAIKFLV-ke....
  28 CGAYIP--DNKREFIK----ylei..
  29 CGAYIPS-EREREFLELLD-r.....
  30 AGIRVPK-ARFAEFRKLID-k.....
  31 AGATIPE-GREDEFLKLLD-r.....
  32 AGAMVPY-RDMESFLQLVDE......
  33 AGANITP-DKVEEFLKEVD-r.....
  34 SGAVVSK-DKVQEFLKRVDE......
  35 AATQLSG-ISVSEALERLK-h.....
  36 GAVKLEN-VSAERI------ke6ka.
  37 AQGKVKDISKAKDVIE----siks..
  38 AQGAVQQLLDREEMLDVIF-r.....
  39 AQGGGKAPDKFPEAVKLLKE......
  40 AQAGAGNPAALDAALNA---ard...
  41 AQAGGTDAAALPAA------la6kg.
  42 AQAGGKQPEKLEEAL-----asved.
  43 AMAGGSQLENVTQAIKVA--qd....
  44 AQAGGSEGGKADEALVA---lkd...
  45 AQAGGRDASKLPEALATA--kq....
  46 AQAGGNDIINLTNINKKLW-s.....
  47 AQGKYE--GDVEEIKKKVIE......
  48 AQGSAPALPATEVLNETLWQ......
  49 AQGSSAELPQIEFLNKTLR-q.....
  50 ARGRVE--AKPEEIFDVAL-eklrs.
  51 CQGVGDKPLSIDVAVEEAIE......
  52 FQGMGDKPAAIKDAVDD---les...
  53 AQGAGPATDKVDEALEE---ara...
  54 AQGGGLDPRKAREALP----gllp..
  55 AQGSGKNPTGIDAALD----avrs..
  56 AQLTGENVDKLDAAVELA--qk....
  57 AQATGKNVGCLQEALQL---ats...
  58 AQASGNNPNSLNEAIQIANE......
  59 ASAGGKDIENLQAALNL---akn...
  60 ASGQGTDASQVQAALDM---ass...
  61 AGLSLEE-DKFKLFQQRF--ge....
  62 AGLSLVE-DRFDEFRQRF--ad....
  63 AGLSIRE-EHFADFQHIFNQ......
  64 AGLSLPL-DKLPLFTEAVN-q.....
  65 AGMTLKA-EDVPDLRSRLNE......
  66 AGFSIPS-ERIPQLLHR---mel...
  67 AGVIMKE-DKVEDFKKKFV-h.....
  68 AGIIINE-DQVEAFRKKFI-h.....
  69 AGLMIKE-DQVEGFRKKFI-h.....
  70 AGFTATA-SKLQELQDFLND......
  71 CGLSVGK-NNIVSLFET---lenf..
  72 MGLTLPS-NRLEEFREKVNQ......
  73 AAFVLDEKNQFMKLVQIMDD......
  74 AGFTLHE-NLLEDFIKE---ley...
  75 SGGKIDG-------------f16ee.
  76 SGAKIKT-NSYEEALKKLLE......
  77 SGFRIKQ-GSLEIVKN----rmla..
  78 AGLRIE--GTVDELLPRF--va....
  79 AGYTTT--GSIDDAV-----aslra.
  80 SGAVLKSKRDI---------ir6qd.
  81 SGAIITNKKQISDVVSD---cv7vy.
  82 SGCSITD-EVYELFVA----eafr..
  83 AAAKIP--------------l19ee.
  84 GGARIP--------------l19ee.
  85 AGAQIP--------------l19te.
  86 GGLNAP--------------y13ke.
  87 AGANGK--ENLDEAIKFLV-ke....
  88 CGAYIP--DNKREFIK----ylei..
  89 CGAYIPS-EREREFLELLD-r.....
  90 AGIRVPK-ARFAEFRKLID-k.....
  91 AGATIPE-GREDEFLKLLD-r.....
  92 AGAMVPY-RDMESFLQLVDE......
  93 AGANITP-DKVEEFLKEVD-r.....
  94 SGAVVSK-DKVQEFLKRVDE......
  95 AATQLSG-ISVSEALERLK-h.....
  96 GAVKLEN-VSAERI------ke6ka.
  97 AQGKVKDISKAKDVIE----siks..
  98 AQGAVQQLLDREEMLDVIF-r.....
  99 AQGGGKAPDKFPEAVKLLKE......
 100 AQAGAGNPAALDAALNA---ard...
 101 AQAGGTDAAALPAA------la6kg.
 102 AQAGGKQPEKLEEAL-----asved.
 103 AMAGGSQLENVTQAIKVA--qd....
 104 AQAGGSEGGKADEALVA---lkd...
 105 AQAGGRDASKLPEALATA--kq....
 106 AQAGGNDIINLTNINKKLW-s.....
 107 AQGKYE--GDVEEIKKKVIE......
 108 AQGSAPALPATEVLNETLWQ......
 109 AQGSSAELPQIEFLNKTLR-q.....
 110 ARGRVE--AKPEEIFDVAL-eklrs.
 111 CQGVGDKPLSIDVAVEEAIE......
 112 FQGMGDKPAAIKDAVDD---les...
 113 AQGAGPATDKVDEALEE---ara...
 114 AQGGGLDPRKAREALP----gllp..
 115 AQGSGKNPTGIDAALD----avrs..
 116 AQLTGENVDKLDAAVELA--qk....
 117 AQATGKNVGCLQEALQL---ats...
 118 AQASGNNPNSLNEAIQIANE......
 119 ASAGGKDIENLQAALNL---akn...
 120 ASGQGTDASQVQAALDM---ass...
 121 AGAMVPY-RDMESFLQLVDE......
 122 AGMTLKA-EDVPDLRSRLNE......
 123 AGLSIRE-EHFADFQHIFNQ......
 124 AGLTIEE-QNFERFCRLFDQ......
 125 AQGSAPALPATEVLNETLWQ......
 126 AQASGNNPNSLNEAIQIANE......
 127 AGIIINE-DQVEAFRKKFIH......
 128 AGLMIKE-EQIEGFRKKFIH......
 129 AGIRVPK-ARLAEFRKLID-......
 130 AGIIINE-DQVEAFRKKFIH......
 131 AQGGGKAPDKFPEAVKLLKE......
 132 AGLSLEE-DKFKLFQQRF--......
 133 SGAVVSK-DKVQEFLKRVDE......
 134 AGLSLEE-DKFKLFQQRF--......
 135 AQGSSKELPQIEVLNTIL--......
 136 AQGGGKAPDKFDESVKLLKE......
 137 AGATIPE-GREDEFLKLLD-......
 138 AQLTGENVDKLDAAVEL---......
 139 MGLTLPS-NRLEEFREKVNQ......
 140 CQGVGDKPLSIDVAVEEAIE......
 141 AGLSLVE-DRFDEFRQRF--......
 142 AGANGK--ENLDEAIKFL--......
 143 AGLMIKE-DQVEGFRKKFI-......
 144 AGIRVPK-ARFAEFRKLID-......
 145 AGVIMKE-DKVEDFKKKFV-......
 146 SGAKIKT-NSYEEALKKLLE......
 147 AQATGKNVGCLQEALQL---......
 148 AGFTATA-SKLQELQDFLND......
 149 FQGMGDKPAAIKDAVDDL--......
 150 FQGMGDKPAAIKDAVDDL--......
 151 AQASGTNYEKVDEIVQL---......
 152 CGAYIPS-EREREFLELLD-......
 153 AQGSSAELPQIEFLNKTLR-......
 154 AQASGTNYEKVDEIVQL---......
 155 AGANGK--ENLDEAIKFL--......
 156 AQGSSAELPQIEFLNKTLR-......
 157 AMAGGSQLENVTQAIKVA--......
 158 AQAGGTDAHALPSALESV--......
 159 AAFVLDDKRQFMKLVEIMDD......
 160 AQAGGTDADKLPAVLDSV--......
 161 AGLSILE-HNIPAFQTTF--......
 162 AGLSILE-HNIPAFQTTF--......
 163 AGLSILE-HNIPAFQTAF--......
 164 AQAGGKQPEKLEEALA----......
 165 AQAGGTDAAALPAA------......
 166 AQAGGRHPERIKDVLERLE-......
 167 AQAGGTDAGKLPEML-----......
 168 ATAGGKDLSKINEALK----......
 169 AGISLNS-ENFEQFKNKI--......
 170 AGFTLHE-NLLEDFIKEL--......
 171 CGAYIP--DNKREFIKY---......
 172 AGVTFEG-KKIEEVIPRV--......
 173 VQGGTSEQEKLDELLTVV--......
 174 ASAGGKDIENLQAALNL---......
 175 AQGSGKNPTGIDAALDA---......
 176 AGCSLTNIDQLENLLSAL--......
 177 AGFSIPS-ERIPQLLHR---......
 178 AGANITP-DKVEEFLKEVD-......
 179 AAFVLDEKNQFMKLVQIMDD......
 180 AQAGGTDAAALPAA------......
 181 AQAGGTDAAALPAA------......
 182 ASAGGKDIENLQAALNL---......
 183 AQGAVQQLLDREEMLDVIF-......
 184 AQAGGRDASKLPEALAT---......