# TARGET RECJ_ECOLI/382-451
# Using neural net overrep-2500-IDaa13-5-10-7-10-5-10-11-ehl2-seeded9-stride-trained.net
# This is a 4-layer network, with 
#	window	units
#	    5	   10
#	    7	   10
#	    5	   10
#	   11	    3 (1 EHL2 )
# The input amino acid frequencies were determined from
# alignment pf02272-tuned.t2k.a2m.gz
# with weighted counts, using EntropyWeight(1.4 bits/column, 10)
# The weighting was determined by the posterior distribution
# after regularizing with /projects/compbio/lib/recode3.20comp.
# Counts were regularized to probabilities using
# /projects/compbio/lib/recode3.20comp
# Total sequence weight for alignment was 109.229
#
# CHAIN 1
Pos	AA	E	H	C
10N	1S	5N	5N	5N
1	H	0.019	0.003	0.978
2	R	0.167	0.002	0.831
3	P	0.447	0.001	0.552
4	V	0.875	0.001	0.124
5	I	0.980	0.001	0.019
6	A	0.988	0.001	0.011
7	F	0.978	0.001	0.021
8	A	0.927	0.001	0.072
9	-	0.778	0.001	0.221
10	P	0.591	0.003	0.405
11	A	0.204	0.018	0.778
12	G	0.049	0.022	0.929
13	D	0.029	0.014	0.957
14	G	0.073	0.002	0.925
15	T	0.732	0.001	0.267
16	L	0.964	0.001	0.036
17	K	0.990	0.001	0.010
18	G	0.995	0.001	0.005
19	S	0.992	0.001	0.007
20	G	0.962	0.001	0.037
21	R	0.783	0.005	0.212
22	S	0.502	0.022	0.476
23	I	0.201	0.072	0.727
24	Q	0.069	0.154	0.777
25	G	0.046	0.340	0.614
26	L	0.087	0.471	0.442
27	H	0.079	0.571	0.351
28	M	0.089	0.606	0.304
29	R	0.046	0.563	0.391
30	-	0.028	0.096	0.876
31	-	0.070	0.031	0.899
32	D	0.087	0.040	0.873
33	A	0.004	0.953	0.043
34	L	0.001	0.985	0.014
35	E	0.001	0.992	0.007
36	R	0.001	0.988	0.011
37	L	0.001	0.985	0.014
38	D	0.001	0.980	0.019
39	T	0.001	0.971	0.029
40	L	0.002	0.935	0.063
41	Y	0.002	0.917	0.081
42	P	0.002	0.879	0.119
43	G	0.005	0.818	0.177
44	M	0.012	0.642	0.346
45	M	0.014	0.099	0.887
46	L	0.027	0.080	0.893
47	K	0.041	0.056	0.903
48	F	0.059	0.101	0.840
49	G	0.078	0.111	0.811
50	G	0.125	0.118	0.757
51	H	0.177	0.157	0.667
52	A	0.084	0.554	0.363
53	M	0.083	0.571	0.346
54	A	0.079	0.608	0.313
55	A	0.109	0.567	0.323
56	G	0.103	0.591	0.306
57	L	0.118	0.255	0.627
58	S	0.167	0.167	0.666
59	L	0.093	0.070	0.837
60	E	0.046	0.048	0.906
61	E	0.039	0.038	0.923
62	-	0.015	0.404	0.581
63	D	0.021	0.252	0.727
64	K	0.015	0.305	0.680
65	F	0.001	0.982	0.018
66	K	0.001	0.992	0.008
67	L	0.001	0.995	0.005
68	F	0.001	0.991	0.009
69	Q	0.001	0.988	0.011
70	Q	0.003	0.971	0.026
71	R	0.001	0.956	0.042
72	F	0.005	0.858	0.138
73	-	0.005	0.544	0.451
74	-	0.001	0.031	0.968