# TARGET T0119-1-100 # Using neural net overrep-2500-IDaa13-5-10-7-10-5-10-11-ehl2-seeded9-stride-trained.net # This is a 4-layer network, with # window units # 5 10 # 7 10 # 5 10 # 11 3 (1 EHL2 ) # The input amino acid frequencies were determined from # alignment T0119-1-100.t2k.a2m.gz # with weighted counts, using EntropyWeight(1.4 bits/column, 10) # The weighting was determined by the posterior distribution # after regularizing with /projects/compbio/lib/recode3.20comp. # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 170.611 # # CHAIN 1 Pos AA E H C 10N 1S 5N 5N 5N 1 M 0.575 0.033 0.392 2 S 0.679 0.017 0.305 3 N 0.752 0.017 0.231 4 H 0.724 0.010 0.267 5 Q 0.780 0.006 0.214 6 V 0.839 0.005 0.157 7 A 0.894 0.004 0.102 8 L 0.938 0.004 0.058 9 Q 0.956 0.002 0.042 10 F 0.926 0.002 0.072 11 E 0.815 0.002 0.183 12 D 0.413 0.006 0.580 13 G 0.088 0.009 0.903 14 V 0.058 0.011 0.931 15 T 0.275 0.005 0.720 16 R 0.800 0.002 0.198 17 F 0.953 0.001 0.046 18 I 0.988 0.001 0.012 19 C 0.977 0.001 0.022 20 I 0.872 0.002 0.126 21 A 0.279 0.007 0.714 22 Q 0.016 0.036 0.948 23 G 0.017 0.126 0.858 24 E 0.193 0.278 0.529 25 T 0.246 0.373 0.382 26 L 0.020 0.953 0.028 27 S 0.010 0.966 0.024 28 D 0.003 0.983 0.014 29 A 0.004 0.970 0.025 30 A 0.002 0.974 0.024 31 Y 0.001 0.966 0.033 32 R 0.001 0.942 0.058 33 Q 0.001 0.801 0.198 34 Q 0.002 0.030 0.968 35 I 0.028 0.015 0.957 36 N 0.146 0.008 0.847 37 I 0.439 0.010 0.551 38 P 0.414 0.007 0.578 39 M 0.398 0.051 0.551 40 D 0.401 0.062 0.537 41 C 0.241 0.112 0.646 42 R 0.124 0.091 0.786 43 E 0.094 0.122 0.784 44 G 0.147 0.054 0.799 45 E 0.353 0.025 0.622 46 C 0.422 0.016 0.563 47 G 0.574 0.011 0.416 48 T 0.673 0.009 0.318 49 C 0.736 0.005 0.259 50 R 0.877 0.003 0.120 51 A 0.946 0.003 0.051 52 F 0.964 0.003 0.033 53 C 0.924 0.004 0.072 54 E 0.741 0.005 0.254 55 S 0.498 0.009 0.493 56 G 0.307 0.028 0.665 57 N 0.383 0.058 0.559 58 Y 0.385 0.114 0.502 59 D 0.283 0.112 0.604 60 M 0.142 0.160 0.698 61 P 0.061 0.133 0.806 62 E 0.040 0.195 0.766 63 D 0.045 0.238 0.716 64 N 0.040 0.277 0.683 65 Y 0.028 0.311 0.661 66 I 0.014 0.545 0.442 67 E 0.012 0.590 0.398 68 D 0.012 0.511 0.477 69 A 0.016 0.302 0.682 70 L 0.014 0.134 0.851 71 T 0.004 0.045 0.950 72 P 0.001 0.874 0.126 73 E 0.001 0.863 0.136 74 E 0.003 0.877 0.120 75 A 0.007 0.749 0.245 76 Q 0.014 0.649 0.337 77 Q 0.015 0.362 0.623 78 G 0.015 0.010 0.975 79 Y 0.305 0.007 0.688 80 V 0.765 0.009 0.226 81 L 0.946 0.005 0.049 82 A 0.969 0.003 0.028 83 C 0.925 0.004 0.071 84 Q 0.920 0.004 0.075 85 C 0.892 0.006 0.102 86 R 0.866 0.006 0.128 87 P 0.731 0.008 0.261 88 T 0.388 0.009 0.603 89 S 0.230 0.007 0.763 90 D 0.254 0.002 0.744 91 A 0.830 0.001 0.169 92 V 0.968 0.001 0.031 93 F 0.988 0.001 0.011 94 Q 0.982 0.001 0.017 95 I 0.867 0.002 0.131 96 Q 0.434 0.003 0.563 97 A 0.068 0.046 0.886 98 S 0.020 0.089 0.891 99 S 0.015 0.111 0.874 100 E 0.006 0.022 0.972