(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.cse.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0117 Deoxyribonucleoside kinase, Drosophila melanogaster
    • gi|7271649|gb|AAF44495.1|AF198100_142_9:230 (AF198100) ORF FPV151 Deoxycytidine kinase [Fowlpox virus] (Fowlpox virus)
    • gi|1246355|gb|AAA93507.1|_266:498 (L37432) (thymidine kinase):(phleomycin/zeocin binding protein) fusion protein [Cloning vector pZEO-SG1] (Cloning vector pZEO-SG1)
              10        20        30            40             50      
              |         |         |             |              |      
   1 MAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTT....YLNHFEKY.....KNDICLLTEPVEK
   2 ---AASCARKGTKYAEGTQPFTVLIEGNIGSGKTT....YLNHFEKY.....KNDICLLTEPVEK
   3 LRNCFVDAPHARAMHDGGGPRRLCIEGNIAVGKST....FVKLLMKT.....HPEWQVATEPIAE
   4 ---AFCQRPSSDKEQEKEKKSVICVEGNIAGGKTT....CLEFFSNA.....-TDVEVLTEPVSK
   5 -------AWPPDKEQEKEKKSVICVEGNIASGKTT....CLEFFSNA.....-TDVEVLTEPVSK
   6 --SPLEGVSSSRGLHAGRGPRRLSIEGNIAVGKST....FVKLLTKT.....YPEWHVATEPVAT
   7 -RNALVDAPHARAMHDGGGPRRLCIEGNIAVGKST....FVKLLMKT.....HPEWQVATEPIAA
   8 ------------KEQEKEKKSVICVEGNIAGGKTT....CLEFFSNA.....-TDVEVLTEPVSK
   9 --SPLEGVSSSRGLHAGRGPRRLSIEGNIAVGKST....FVKLLTKT.....YPEWHVATEPVAT
  10 --SPLEGVSSSRGLHAGCGPRRLSIEGNIAVGKST....FVKLLTKT.....YPEWHVATEPVAT
  11 --------------HDGGGPRRLCIEGNIAVGKST....FVKLLMKT.....HPEWQVATEPIAA
  12 --PRRAWPPDKDRENDKEKKAVVCIEGNIASGKTT....CLEFFSNT.....-TDVEVLMEPVLK
  13 -TPPKRSCPSFSASSEGTRIKKISIEGNIAAGKST....FVNILKQL.....CEDWEVVPEPVAR
  14 -TPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKST....FVNILKQA.....SEDWEVVPEPVAR
  15 -TPPKRFCSSPSTSSEGTRIKKISIEGNIAAGKST....FVNILKQV.....CEDWEVVPEPVAR
  16 PVTVPVHLMQPHPMTEYRNAFLIYLEGVMGVGKTT....LLNSMTGMvp...QENVLSCPEPMKF
  17 PVTVPVHLMQPHPMTEYRNAFLIYLEGVMGVGKTT....LLNSMTGMvp...QENVLSCPEPMKF
  18 LVHVPVHVLYPPLHQEPIPAFFIFLEGSIGVGKTT....LLKSMRGIlp...GKNVLTFHEPMAF
  19 -----SNLLKFENCSLLETHKKISIEGNISAGKST....LINILSD-.....-NGYNVVQEPLEQ
  20 LVHVPVHLLYPPMHQELVPAFFIFLEGSIGVGKTT....LLKSMNGIlg...GKNVLAFHEPIAY
  21 LVHVPVHLLYPPKHQDPVPAFFIFLEGSIGVGKTT....LLKSMNGIlg...GKNVLAFHEPIAY
  22 -MRVPIVTHLTNHVPVIKPACSLFLEGAPGVGKTT....MLNHLKAVf....GDLTIVVPEPMRY
  23 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  24 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  25 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  26 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  27 ---------STDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  28 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  29 -KPAPAHLLYPRPPTGYTDAYFIFFEGVMGVGKTT....LLKTLARNd....MNNVIIFEEAMNY
  30 -YSYMSKMSTDFPAGPTRCATVLYFDGGIAVGKTT....ALEAAAEF.....LHNILVISEPIPY
  31 -YSYMSKMSTDFPAGPTRCATVLYFDGGIAVGKTT....ALEAAAEF.....LHNILVISEPIPY
  32 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  33 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGGPLSY
  34 PRDVFNTFLGSGTCPSFKNAFFLYLEGSMGVGKTT....LIRHMREIn....GDNVISFVEPMFY
  35 -------------EHHIPKNSIITVAGTVGVGKST....LTKTLAKR.....-LGFKTSLEEVDH
  36 CQPGFTPIFQDLGEPHYVKACTVFFEGCMAAGKTT....LLNFARQTls...DDEALTIPEPMRF
  37 CQPGFTPIFQDLGEPHYVKACTVFFEGCMAAGKTT....LLNFARQTls...DDEALTIPEPMRF
  38 -LMVPVHLIRTPVTVDYRNVYLLYLEGVMGVGKST....LVNAVCGIlp...QERVTSFPEPMVY
  39 -MRVPIVTHLTNHVPVIKPACSLFLEGAPGVGKTT....MLNHLKAVf....GDLTIVVPEPMRY
  40 -MRVPIVTHLTNHVPVIKPACSLFLEGAPGVGKTT....MLNHLKAVf....GDLTIVVPEPMRY
  41 --------------------KKLSIEGNISSGKTD....VLNILRNI.....-NNVVSFHDVEDR
  42 --------------------LVIVIEGLIGVGKTT....LGNILSKE.....-LEVPFYSELNND
  43 ---------GPTPARFLPEGLVFCVEGNIGCGKST....LVKALMERva...GSGVNVVEEPVDQ
  44 ---------------------YVAVSGNIGSGKST....LTRMLAER.....-YGLRPVYEPYAE
  45 -------------------MTVIVLSGPIGAGKSS....LTSLLAEH.....-LGTQAFYEGVDN
  46 -FNYIDGLKDDTRSHFHQNSKLIVVEGNIGSGKTT....LAKQLADQ.....-LGFVHFPEFRMD
  47 --PLAYILGEKATKKMTEKSKLITVDGNICSGKSK....LAKEIAEK.....-LGLKHFPEAGIH
  48 ----------HGTCRDPVCITRVYLEGAFGIGKTT....TALAFVNGsr...VNPVFFIGEPMMY
  49 --------------------MLIVLAGTIGAGKSS....LAAALGEH.....-LGTDVFYEAVDN
  50 -------------------MTIICIDGIIGAGKST....VTHRLKK-.....-NLYKCYEEPIDK
  51 ------------SKRLTERSRVITVDGNICTGKGK....LAKEIAEK.....-LGFKHFPEAGIH
  52 -------------------MTVIVLSGPIGAGKSS....LTGILSKY.....-LGTNPFYESVDD
  53 --------------------PFIAIEGPIGAGKTT....LATMLSQK.....-FGFPMINEIVED
  54 --------------------MYVVVEGPIGVGKTS....LAQRLAQR.....-SGAELNLEVVEE
  55 --------------------MIISVDGLMGSGKTT....LLDRLEKR.....--GFKVFREPVGE
  56 -------------------ANCIVIGGMIALGKTT....IANTLANH.....IQAAKVVCELETN
  57 ----------------IMAALFIVLEGIDGSGKTTqgdlLLAHFQRQ.....GLAAVLSPEPTNG
  58 --------------------NAVVVGGMIAFGKTT....IAESLAKH.....LKGSKVIYELEEQ
  59 ------------------AALFIVLEGIDGSGKTTqgdlLLAHFQRQ.....GLAAVLSPEPTNG
  60 ---------------------SIAIGGMIAFGKST....LAQALHEK.....YQPSNVVYEMVEG
  61 -------------------VLRIYLDGPHGIGKTT....LGSELTKVlah..RADVVFVPEPMAY
  62 --------------------LRVYVDGPHGLGKTT....AASRLASE.....RGDAIYLPEPMSY
  63 YVGIAVRKMPNKSAEENMKGKFIVIEGLEGAGKSSahqsVVRVLHELg....IQDVVFTREPGGT
  64 -------------------GRLIVIEGLDRSGKST....QCQLLVDKli6heKAELFKFPDRTTA
  65 --------MSTDKTDVKMGVLRIYLDGAYGIGKTTaaeeFLHHFAIT.....PNRILLIGEPLSY
  66 --------------------KLIAIEGIDGSGKTT....LANLLKEHleskmKLNVIVTREPFSE
  67 -------------------MRIVALEGIDGSGVSThsrlLHARLAGA.....GVKSCLWKEPTEG
  68 -AGQPERFNFNRNTILLDGMRFIVIDGMDGAGKDT....HAEFVRRRyae..RGSVIVRTHPSDS
  69 -----------------MKGKFIVIEGLEGAGKSSahqsVVRVLHELg....IQDVVFTREPGGT
  70 -------------------GRLIVIEGLDRSGKST....QCQLLVDKl....ILNMKRLKLFKFP
  71 ----------------GMEKMIVGIAGKIAAGKTT....VAKFLEEF.....GFCRISCSEPLFD
  72 --------------------MLIAVEGIDGAGKTTiaayIAELLKEK.....GYKVKVLKEPGDS
  73 -----------------------------------....--------.....-------------
  74 ----------------GVEKTIVGIAGKIAAGKTT....VAKFLEEL.....GFCRISCSEPLLD
  75 -------------------MTLIILEGPDCCFKST....VAAKLSKE.....-------------
  76 -------------------MKRIGLTGNIGCGKST....VAQMFREL.....-GAYVLDADKLIH
  77 -----------------------CIEGIDGSGKTS....ITNKLKALcnd..ESRYYFTKEPSSG
  78 --------------------MLIALTGTPGTGKSS....VAERLRER.....GYKVATVVELAEK
  79 ----ISDYVSPSAPAPLKQPFVIGVAGGTASGKTT....VCNMIMSQ.....LHDQRVVLVNQDS
  80 --------------------MLIAITGTPGVGKTT....IAKLLAEK.....-LGYEY-------


        60                70                    80         90          
        |                 |                     |          |          
   1 WRNV.....NGVNLLEL...MY.....K...DPK...K.WAMPFQSYVTLTML.QSHTAPT....
   2 WRNV.....NGVNLLEL...MY.....K...DPK...K.WAMPFQSYVTLTML.QSHTAPT....
   3 WQNIq12skRLGNLLEM...MY.....Q...EPA...R.WSYTFQTLSFMSRL.KVQLEPIpg7q
   4 WRNV.....RGHNPLGL...MY.....H...DAS...R.WGLTLQTYVQLTML.DRHTRPQ....
   5 WRNV.....RGHNPLGL...MY.....H...DAS...R.WGLTLQTYVQLTML.DRHTRPQ....
   6 WQNIq12aqSLGNLLDM...MY.....R...EPA...R.WSYTFQTFSFLSRL.KVQLEPFpe7q
   7 WQNIq12skRLGNLLEM...MY.....Q...EPA...R.WSYTFQTLSFMSRL.KVQLEPIpg7q
   8 WRNV.....RGHNPLGL...MY.....H...DAS...R.WGLTLQTYVQLTML.DRHTRPQ....
   9 WQNIq12aqSLGNLLDM...MY.....R...EPA...R.WSYTFQTFSFLSRL.KVQLEPFpe7q
  10 WQNIq12aqSLGNLLDM...MY.....R...EPA...R.WSYTFQTFSFLSRL.KVQLEPFpe7q
  11 WQNIq12skRLGNLLEM...MY.....Q...EPA...R.WSYTFQTLSFMSRL.KVQLEPIpg7q
  12 WRNV.....HGHNPLSL...MY.....H...DAS...R.WGLTLQTYVQLTML.DQHTRPQ....
  13 WCNVq15qkNGGNVLQM...MY.....E...KPE...R.WSFTFQTYACLSRI.RAQLASLng7d
  14 WCNVq15qkSGGNVLQM...MY.....E...KPE...R.WSFTFQSYACLSRI.RAQLASLng7d
  15 WCNVq15qkSGGNVLQM...MY.....E...KPE...R.WSFIFQSYACLSRI.RAQLASLng7d
  16 WTCV.....YSNCLKEQrs.IV.....K...QGT...H.GKLITSARVYACQS.KFALPFRa21t
  17 WTCV.....YSNCLKEQrs.IV.....K...QGT...H.GKSITSARVYACQS.KFALPFRa21t
  18 WKNV.....F-SNSLDE...VY.....KltlPAK...V.GSMTNSSKLLACQL.KFAAPLLa18l
  19 WR--.....-GNNLLDK...LY.....K...DPS...R.WAYTFQSHAFWTRT.KTYIDALnk..
  20 WTDV.....F-SNSLEE...VY.....KltlPAK...V.GRTSNSAKLLACQL.KFASPLLa18l
  21 WTDV.....F-SNSLEE...VY.....KltlPAK...V.GRTSNSAKLLACQL.KFASPLLa18l
  22 WTHV.....Y-ENAIKA...MH.....KnvtRAR...H.GREDTSAEVLACQM.KFTTPFRv21a
  23 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  24 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  25 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  26 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  27 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  28 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  29 WKTV.....F-SDCHKL...IYdvm..K...MGK...H.GSFSVSSKLLACQM.KFLTPLKs22s
  30 WTST.....FDKNVCQQ...IY.....Dvv.KTK...E.KGKKHSKKVLQCQM.AFAQPFHa19g
  31 WTST.....FDKNVCQQ...IY.....Dvv.KTK...E.KGKKHSKKVLQCQM.AFAQPFHa19g
  32 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  33 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  34 WREV.....Y-SDCVKL...IYsac..K...PFN...L.GKMSTSKKVLSAQM.KFMTPMKc21t
  35 ----.....--NPYLEK...FY.....H...DFE...R.WSFHLQIYFLAERF.KEQKTIFe...
  36 WTEV.....Y-TNVLSQ...IV.....KinkECK...P.GKTSTTAELVSCQL.KFATPLKt21g
  37 WTEV.....Y-TNVLSQ...IV.....KinkECK...P.GKTSTTAELVSCQL.KFATPLKt21g
  38 WTRA.....FTDCYKEI...SHlm...K...SGK...A.GDPLTSAKIYSCQN.KFSLPFRt21g
  39 WTHV.....Y-ENAIKA...MH.....KnvtRAR...H.GREDTSAEVLACQM.KFTTPFRv21a
  40 WTHV.....Y-ENAIKA...MH.....KnvtRAR...H.GREDTSAEVLACQM.KFTTPFRv21a
  41 YTPI.....E-KELIRK...FH.....E...NPS...R.WSYALQTHYCMKRV.RMHLECFv...
  42 FT--.....--LAVLDK...FY.....K...DKS...R.WAFPVQINFLNERF.KLIKGVF....
  43 WVNH.....NGKNYLEL...SY.....T...DPT...G.YAVPFQNLVFDSYV.NVQ---R....
  44 ----.....--NPYLED...FY.....H...DMR...Q.YSFHSQVYFLSRRL.EQHLGMVt...
  45 ----.....--NPILPL...YY.....K...DMA...H.YTFLLNTYLLNHRL.AQINQAI....
  46 DILVd17arYRLPDISM...FY.....K...NPS...GeLSAAMQDRIFNCRF.DQYLNALahil
  47 YVDSt12qfSGNCSLEK...FY.....D...DPKsndG.NSYRLQAWLYASRL.LQYADALehll
  48 WRNM.....AGDDAING...IYg13sdN...DAQ...R.LTAYFQGLFCSPHS.MLHARILh15f
  49 ----.....--NPVLDF...YY.....Q...DPK...K.YAFLLQIYFLNKRF.KSIKEAY....
  50 WT--.....----LLPN...LY.....N...DMK...K.YATPFQFQVLFSQY.DQYLSFKd...
  51 YPDSt12dyNGNCSLEK...FY.....D...DPRsndG.NSYRLQSWLYSSRL.LQYSDALehll
  52 ----.....--NPVLPL...FY.....E...NPK...K.YAFLLQVYFLNTRF.RSIKSAL....
  53 ----.....--NPYLDK...FY.....D...NIK...E.WSFQLEMFFLCHRY.KQLEDTSdhfl
  54 ----.....--NPFLAK...FY.....E...QPQ...A.YAFQVQAFFLLSRF.KQLSQLWqpgl
  55 WK--.....----FLNK...FY.....K...NPK...K.YALALQLEILVSFT.KYT---F....
  56 DQLV.....--ELLLAK...MY.....Ers.DEL...L.YSPLFQLYFTLNRFgKYQNNCN....
  57 PVGR.....LIRQALQGdlfTY.....N...DAR...Q.FEAQMGYLFAADRH.YHLYHPGdg8l
  58 DQLA.....--DLLLAK...MY.....Ern.DEL...L.YAPLFQLYFTLNRFnKYRKECN....
  59 PVGR.....LIRQALQGdlfTY.....N...DAR...Q.FEAQMGYLFAADRH.YHLYHPGdg8l
  60 DKLM.....--DLLLAK...MY.....Ere.NNV...L.FGSLFQLYFVLNRF.ANYKNNCn...
  61 WRAV.....GGVDTIAS...VYet6rcD...NKE...I.SSEEASLIMANTQV.LMNMPYMv22p
  62 WSGA.....GEDDLVAR...VYta6rmD...RGE...I.DAREAAGVVLGAQL.TMSTPYVa21t
  63 PL--.....--AEKLRH...LI.....KhetEEP...V.TDKAELLMLYAARI.QLVENVIkpal
  64 IGKK.....IDDYLKES...VQ.....L...NDQ...V.IHLLFSANRWETIQ.YIYEQIN....
  65 WRNL.....AGEDAICG...IYg13spE...DAQ...R.LTAHFQSLFCSPHA.IMHAKISa16k
  66 ----.....----DIIK...LI.....E...KIG...W.NDPILLVLLFAADR.EIHVNWLskik
  67 PV--.....--GRLIRG...FL.....R...STE...G.VDSDLMALLFAADR.LWGLR--....
  68 LFGR.....V---AKAS...LL.....R...RGK...F.FHLMAAIFYFFDVI.YSLLR--....
  69 PL--.....--AEKLRH...LI.....KhetEEP...V.TDKAELLMLYAARI.QLVENVIkpal
  70 DRTT.....AIGKKIDD...YLt....E...SVQ...L.NDQVIHLLFSANRW.EPSIYYRanq.
  71 ILTG.....N-------...--.....-...---...-.----TQGYSWVPEV.EFKGEPT....
  72 KFGKki9rlSPEEELEL...FL.....K...DRE...I.D----------ARE.NILPALQ....
  73 ----.....--------...--.....-...---...-.-----QIYMLTARS.KQLKQAK....
  74 ILTG.....N-------...--.....-...---...-.----VSEYSWVPEV.NFKGEPT....
  75 ----.....-------L...KY.....P...IIK...G.SSFELAKSGNEKLF.EHFNKLA....
  76 SFYR.....KGHPVYEE...VVk27deE...KLR...K.LEEITHRALYKEIE.KITKNLS....
  77 II--.....--GEMIRK...QL.....M...NFEnp.L.EESTFAYLYAADRH.DHLYKKGgi8n
  78 ----.....--------...--.....-...---...-.--------------.-------....
  79 FYHS.....LTKEKLNK...VH.....Ey..NFD...H.PDAFNTEVLLSCME.KLRSGQPvnip
  80 ----.....--VNLRDF...AL.....E...KGC...G.REVDGEVEVEIDEL.AYFVEKEl...


        100       110       120       130       140            150     
         |         |         |         |         |              |     
   1 .NKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESI.....HVQADLIIYLRT
   2 .NKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESI.....HVQADLIIYLRT
   3 aEKSVRVFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLQEFan...RLLLHGFIYLQA
   4 .VSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNM.....DVSVDLIVYLRT
   5 .VSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNM.....DVSVDLIVYLRT
   6 aRKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFas...RITLHGFIYLQA
   7 aEKSVRVFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLQEFan...RLLLHGFIYLQA
   8 .VSSVRLMERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNM.....DVSVDLIVYLRT
   9 aRKPVQIFERSVYSDRYIFAKNLFENDSLSDIEWHIYQDWHSFLLWEFas...RITLHGFIYLQA
  10 aRKPVQIFERSVYSDRYIFAKNLFENDSLSDIEWHIYQDWHSFLLWEFas...RITLHGFIYLQA
  11 aEKSVRVFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLQEFan...RLLLHGFIYLQA
  12 .MSPVRLMERSIYSARYIFVENLYRSGKMPEVDYAILSEWFDWIVRNI.....DVSVDLIVYLRT
  13 aEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFgq...SLELDGIIYLQA
  14 aEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFgq...SLELDGIIYLRA
  15 aEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFgq...SLELDGIIYLRA
  16 kPANWIVFDRHLLSATVVFPLVHVKYNRLTPDHLFQILSLFSA-----.....-HDGDVVVLLTL
  17 kPANWIVFDRHLLSATVVFPLVHVKYNRLTPDHLFQILSLFSA-----.....-HDGDVVVLLTL
  18 sSNMWVMFDRHPLSATVVFPYMHYQNGFLSFSHLVHLWGSFRA-----.....-SHGDNIILLNL
  19 .NKGNIILERSVFSDKYIFATALHDIGYIDDTEWNIYNEYSKWMTEFM.....DIKIDGIIYLKT
  20 sSDMWVMFDRHPLSATVVFPYMHFQNGFLSFSHLIQLWSSFKA-----.....-SQGDNIILLNL
  21 sSDMWVMFDRHPLSATVVFPYMHFQNGFLSFSHLIQLWSSFKA-----.....-SRGDNIILLNL
  22 pLDCWILHDRHLLSASVVFPLMLLRSQLLSYSDFIQVLATFTA-----.....-DPGDTIVWMKL
  23 ePYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPA-----.....EPPGTNLVVCTV
  24 ePYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPA-----.....EPPGTNLVVCTV
  25 ePYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPA-----.....EPPGTNLVVCTV
  26 ePYKIMLSDRHPIASTICFPLSRYLVGDMSPAAPPGLLFTLPA-----.....EPPGTNLVVCTV
  27 ePYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPA-----.....EPPGTNLVVCTV
  28 ePYKIMLSDRHPIASTICFPLSGYLVGDMSPAALPGLLFTLPA-----.....EPPGTNLVVCTV
  29 dVSHWVMFDRHALSACLVFPLVMLKSGMLSFEHFISLVSTFRA-----.....-NEGDIIVLIAL
  30 tCNNYVLIDRHMVSPTVIFPCLFFRLGVLRFCDLLSLLSVFSA-----.....-QKFDNVVLFKL
  31 tCNNYVLIDRHMVSPTVIFPCLFFRLGVLRFCDLLSLLSVFSA-----.....-QKFDNVVLFKL
  32 ePYKIMLSDQHPIASTICFPLSRYLVGDMSPAALPGLLFTLPA-----.....EPPGTNLVVCTV
  33 ePYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPA-----.....EPPGTNLVVCTV
  34 aMDNWLLFDRHPLSATLVFPYLSLKNGYLAFEHFLALAANFTA-----.....-HEGDIIALLCM
  35 .AGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTSLFEAMVMTPy....FPHPDVLIYLEG
  36 pLDKWVIVDRHQLSALVVFPLVLMRRGMLSFSDFFNLLGMFEA-----.....-HPGEVIALMSV
  37 pLDKWVIVDRHQLSALVVFPLVLMRRGMLSFSDFFNLLGMFEA-----.....-HPGEVIALMSV
  38 rGTHWCVFDRHLLSPAVVFPLMHLKHGRLSFDHFFQLLSIFRA-----.....-TEGDVVAILTL
  39 pLDCWILHDRHLLSASVVFPLMLLRSQLLSYSDFIQVLATFTA-----.....-DPGDTIVWMKL
  40 pLDCWILHDRHLLSASVVFPLMLLRSQLLSYSDFIQVLATFTA-----.....-DPGDTIVWMKL
  41 .PSRVNILERSIFSDRYVFAEAATALGYMDDPEWALYCKQHDWYTDKL.....EIQFDGIIYLRT
  42 .RTKGGILDRSIYGD-CVFASLLNCDGHISDEEYKIYIDLLDNMLEHS.....-QRPSLLVYLDC
  43 .LQNPDIMERSPMSATRVFCAVNGSRGVIPATALPGMAARGEAVMRTI.....-ATRPVFVYLEL
  44 .GARYVIQDRTVFEDANIFARNLYESGQMGERDWQTYRGLYEGVLPAL.....-RVPDLLIHIDA
  45 .RDHNSVSDRSIYED-ALFFKMNVDSGIADPTEFKIYDSLLENMMEQApgnp.SKKPDLLIYIHV
  46 nTGQGVVLERTPHSD-FVFANAMRDKNYIGHEYFKHYYFVRKNALPQL.....HFWPHLVVYLNT
  47 sTGQGVVLERSIYSD-FVFLEAMYRQGFIRKQCVDHYNQVKKVTICEY.....-LPPHVVVYVDV
  48 fNNPVAIFDRHPVASNVCFPISRYVVGDMTPATLPGFLFAVSE-----.....EPEGTNLIVCTV
  49 .QADNNILDRSIFED-ELFLKLNYKNGNVTKTELDIYQELLANMLEELegmp.KKRPDLLIYIDV
  50 .CKETVVVERCPWTSKNIFTSLMIENNLFDLSAIDTYNNLYER----L.....SYQVDHFIYIKV
  51 tTGQGVVLERSIFSD-FVFLEAMYNQGFIRKQCVDHYNEVKSVTICDY.....-LPPHLVIYIDV
  52 .TDDNNVLDRSIYED-ALFFQMNADIGRATPEEVDTYYELLHNMMSELdrmp.KKNPDLLVHIDV
  53 kKGQPVIADYHIYKN-VIFAE-----RTLSPHQLEKYKKIYHLLTDDL.....-PKPNFIIYIKA
  54 .YRPEVVSDYLFDKD-FIFAAMN-----LRDAEFDLYQDLYGHLSPRL.....-PTPDLVVYLRA
  55 .TEDIVFTERCPQVSHYVFAKMLSAKGTLTDEEMATYKNFYDKMN---.....LWKPDVHIFLKC
  56 .TINPTIFDRSIFED-WLFA----KHNIIRPAVFSYYNQLWNRLAKELvnk..HGVPNLYVILDG
  57 aQQCHVITTRYYFSS------------LAYNCHTEADWEFVQRLNQSF.....-PQPDWVIYLDL
  58 .NKTPTIFDRSIFED-WLFA----KQNIHRPSIFTYYNHLWNGIVKELifk..HGIPALYVILEG
  59 aQQCHVITTRYYFSS------------LAYNCHTEADWEFVQRLNQSF.....-PQPDWVIYLDL
  60 .RKSLTIFDRSIFED-WLFAHANIDK----PSVFSYYDGLWQGVCKELiye..HGVPKLYVILDG
  61 lPGQTIIVDRHPIASLLCYPLARYLRGSFTLQTAMSLLAFIPK-----.....IPHGTNLVLGKL
  62 pPDLILIFDRHPTASLLCYPLARYLTRCLPIESVLSLIALIPP-----.....TPPGTNLILGTA
  63 mQGKWVVGDRHDMSS----QAYQGGGRQLDPHFMLTLKETVLG-----.....NFEPDLTIYLDI
  64 .KGVTCILDRYAFSG------------IAFSAAKGLDWEWCKSPDRGL.....-PRPDLVIFLNV
  65 ePYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPA-----.....DPP---------
  66 .DADLIILDRYYFSS------------IAYQGALGVDEQWIKMVNSYF.....-PKPDMVILLDL
  67 .---LGVVERCGGSP-EVLVVDRYKYSSLAYQGVGSGLEWVDAVNRKA.....-PEAEILVYIDV
  68 .--------YYGRAETVIFVRYLGGVLYLPERYARVLYRFFRSVL---.....-PTSPYMFYLEA
  69 mQGKWVVGDRHDMSS----QAYQGGGRQLDPHFMLTLKETVLG-----.....NFEPDLTIYLDI
  70 .QRCNCILDRYAFSG------------IAFSAAKGLDWEWCKSPDRGL.....-TRPDLVIFLNV
  71 .RENLIELGRILKEKYGEDILIRLAVDKLRNCENIAIDGVRSMGEVDAi....KRMGGIVVYIEA
  72 .SGYAVVMDRYYFSN------------IAYQSARGIDARLIREMNEKI.....APKPDLTILLDV
  73 .NLENIIFDRTLLED-PIFMKVNYDLNNVDQIDYNTYIEFYNNVVLENlk6enKLSFDIVIYLRV
  74 .RENLIELGRLLKEKYGEDILIRLAIDKLRRCKNIAIDGVRSLGEVEAi....KRMGGIIIYIEA
  75 .DEDNVIIDRFVYSN-LVYAKKFKDYSILTERQLRFIEDKIKA-----.....---KAKVVYLHA
  76 .EDTLFILEASLLVE----------------------KGTYKN-----.....---YDKLIVVYA
  77 tKSRKIITDRYLFSS-------------------IAYQGKLGYELNKN.....FPLPEKVFFIET
  78 .--HGCIIDEEDGEI-VIDVESLAAR--------IDFEGIVEGHLSHL.....-LKPDVAIVLRC
  79 .SYDFKIHQSIESSS------------PVNPGDVIILEGILVLNDPRV.....RDLMNMKIFVDT
  80 .KDRNVVLDGHLSHL---------------------------------.....-MPVDLVVVLRA


        160       170                180       190            200      
         |         |                  |         |              |      
   1 SPEVAYERIRQRARSEES.....CVPL....KYLQELHELHEDWLIH.....QRRPQSC....KV
   2 SPEVAYERIRQRARSEES.....CVPL....KYLQELHELHEDWLIH.....QRRPQSC....KV
   3 SPQVCMERLYQRDREEEK.....GIEL....AYLQQLHSQHEDWFINkt6lhFEALQHV....PV
   4 NPETCYQRLKKRCREEEK.....VIPL....EYLEAIHHLHEEWLIKg....SLFPMAA....PV
   5 NPETCYQRLKKRCREEEK.....VIPL....EYLEAIHHLHEEWLIKg....SLFPMAA....PV
   6 SPQVCLKRLYQRAREEEK.....GIEL....AYLEQLHGQHEAWLIHkt6lhFEALMNI....PV
   7 SPQVCMERLYQRDREEEK.....GIEL....AYLQQLHSQHEDWFINkt6lhFEALQHV....PV
   8 NPETCYQRLKKRCREEEK.....VIPL....EYLEAIHHLHEEWLIKg....SLFPMAA....PV
   9 SPQVCLKRLYQRAREEEE.....GIEL....AYLEQLHGQHEAWLIHkt6lhFEALMNI....PV
  10 SPQVCLKRLYQRAREEEE.....GIEL....AYLEQLHGQHEAWLIHkt6lhFEALMNI....PV
  11 SPQVCMERLYQRDREEEK.....GIEL....AYLQQLHSQHEDWFINkt6lhFEALQHV....PV
  12 TPEICYQRLKMRCREEEK.....VIPM....EYLHAIHRLYEEWLVNg....SLFPAAA....PV
  13 TPETCLHRIYLRGRNEEQ.....GIPL....EYLEKLHYKHESWLLHrt6tnFDYLQEV....PI
  14 TPEKCLNRIYLRGRNEEQ.....GIPL....EYLEKLHYKHESWLLHrt6tsFDYLQEV....PV
  15 TPEKCLNRIYIRGRDEEQ.....GIPL....EYLEKLHYKHESWLLHrt6tnFEYLQEV....PI
  16 NSSEAHRRIQSRGRKEEK.....GITQ....NYLRQVAWAYHAVFCT.....WVMMQYLt...PE
  17 NSSEAHRRIQSRGRKEEK.....GITQ....NYLRQVAWAYHAVFCT.....WVMMQYLt...PE
  18 NSQENLERVKRRNRKEEK.....CVSL....EHIRMLNSCYHAVYCA.....WLLVQNFt...PE
  19 SPDICYKRMLNRARHEEN.....TVKI....DYLNLLHDKHEKWLSEn....NEHEFKV....PV
  20 NSQENLKRVRKRNRKEEK.....SVSI....EHIRLLNNCYHAVYCA.....WLLVQNFt...PE
  21 NSQENLKRVKKRNRKEEK.....SVSI....EHIRLLNNCYHAVYCA.....WLLVQNFt...PE
  22 NVEENMRRLKKRGRKHES.....GLDA....GYLKSVNDAYHAVYCA.....WLLTQYFa...PE
  23 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  24 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  25 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  26 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  27 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  28 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  29 DHGEAIRRIKTRKRPEEE.....TISL....TYVIRLHWCFVAVYNT.....WRLLQYFt...AR
  30 HPKVAATRVKERGRNPEG.....VINH....TYLQLLNEVLDAIFCA.....WELLAIVp...PE
  31 HPKVAATRVKERGRNPEG.....VINH....TYLQLLNEVLDAIFCA.....WELLAIVp...PE
  32 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  33 SLPSHLSRVSKRARPGE-.....TVNL....PFVMVLRNVYIMLINT.....IIFLK--....--
  34 GEEDNLKMVKLRNRKGES.....GVTS....AHLKDLGQAFHACYCT.....WLLLKYLs...PE
  35 DLENILNRIEQRGREMEL.....QTSR....SYWEEMHTRYENWISG.....F---NAC....PV
  36 NVEENFTRLKKRGRVCER.....HIDR....DYIKEIKGSFNAAYCA.....WLFLQYF....S-
  37 NVEENFTRLKKRGRVCER.....HIDR....DYIKEIKGSFNAAYCA.....WLFLQYF....S-
  38 SSAESLRRVRARGRKNDG.....TVEQ....NYIRELAWAYHAVYCS.....WIMLQYIt...VE
  39 NVEENMRRLKKRGRKHES.....GLDA....GYLKSVNDAYHAVYCA.....WLLTQYFa...PE
  40 NVEENMRRLKKRGRKHES.....GLDA....GYLKSVNDAYHAVYCA.....WLLTQYFa...PE
  41 IPESCKERINEKSITEKNyp...NISI....DYLKTLHEKHELWLTQ.....C---KKV....PV
  42 SIDEVERRIKNRNRSFEM.....NIPR....DYLEGLNRKYLKWYDE.....YNLSSKI....KF
  43 PPEECLRRMRRRDRTGEA.....GVGL....DYLRLLHERYEAWLSS.....-----AE....DV
  44 GLPTLRRRIALRGRDYEQ.....AIPD....EYLAGLNRLYAGWIAA.....F---DLC....PV
  45 SLDTMLHRIQKRGRKFEQ.....LSTDpslkDYYARLLSYYEPWY--.....-EKYNAS....PK
  46 PTNKCLENIKRRGNTDEIa....TVDE....RYLKTIEESYKDSLRE.....YR--NHS....KI
  47 PVPEVQSRIQKKGNPHEM.....KITS....AYLQDIENAYKGTFLPemsekCEVLQYS....AW
  48 SLTNHLTRITNRSRSGE-.....IIDV....QFILVLRNVYIMLINT.....IRYLQAK....SD
  49 SFDKMLERIEKRGRSFEQvd...--GNpsleQYYHQVHGEYPTWYED.....Y---KVS....PK
  50 DSEMAFERIKKRDRFAEQ.....NISF....DYLKSLENKYATSLAT.....---LSPS....TV
  51 PVPEVQRRIQKKGDPHEM.....KITS....AYLQDIENAYKKTFLPemsekCEVLQYS....AR
  52 SYDTMLKRIQKRGRNYEQls...--YDptleDYYKRLLRYYKPWYAK.....Y---DYS....PK
  53 SLPTLLHRIEKRGRPFEK.....KIET....SYLEQLISDYEVAIKQl....QEADPEL....TV
  54 DPPELLRRIARRGRPFEH.....DMKA....AYLADLTGRYDDYFRT.....Y----AH....PH
  55 PIDVCEQRLKRRSDSY--.....TIDT....EYMERLEKYYSIFN--.....-KYTNST....PI
  56 DWKLFEKRLFMRNRKVEIdnf..TKNQ....LYFQNLHRVYTGFMEA.....VCNDFGI....NY
  57 PVDLALQRLGDRQQLEDQaprecYEQR....EKLISVHRNYDRIFAH.....Y----QG....QL
  58 DWELFEQRLFQRNRKVEIdnf..AKNK....DYFKNLYKIYGEFIKN.....VCYDFGI....SH
  59 PVDLALQRLGDRQQLEDQaprecYEQR....EKLISVHRNYDRIFAH.....Y----QG....QL
  60 DWELFKERIFKRNRKVEIdnf..SINE....TYFKRLLEMYKNYMVN.....VCKDFGI....NY
  61 SGGETTQRLYERGRPGE-.....VVDW....HMIECIHNIYDRLQNT.....VTYIQQG....NN
  62 PAEDHLSRLVARGPPGE-.....LPDA....RMLRAIRYVYALLANT.....VKYLQSG....GS
  63 DPSVGLARARGRGELDRIe....QMDL....DFFHRTRARYLELVKD.....-----NP....KA
  64 DPRIAATR---GQYGEER.....YEKI....EMQEKVLKNFQRLQKE.....F-REEGL....EF
  65 ------------------.....----....----------------.....-------....--
  66 PIEVAISRIKNDKFNFEE.....KIKS....--LAKVREKYLKLA--.....----KEY....NF
  67 PTEVALRRITARERR-EV.....FETP....EFLERVKSMYEEVL--.....-RLARAR....GV
  68 EPEVCMERVARRSES-EM.....FENI....EDFRRVRERAFRILKG.....W------....--
  69 DPSVGLARARGRGELDRIe....QMDL....DFFHRTRARYLELVKD.....-----NP....KA
  70 DPRIAATR---GQYGEER.....YEKI....EMQEKVLKNLQRLQKE.....F-REEGL....EF
  71 KPEIRFERLRRRGSSKDR.....GIKS....--LEDLLK-FDEWE--.....-EKLYET....TK
  72 EPEIALERVRKRGKLSP-.....FEKL....DYLRKVRKCFLENA--.....-----DE....TT
  73 STKTAISRIKKRGRSEEP.....LIGD....EYWETLNKNYEEFYKQ.....NV--YNF....PF
  74 RAEVRFERLRKRCSEKDR.....GIKT....--LQDLLR-FDEWE--.....-ERLYST....TN
  75 DPSVIKKRLRVRGDE---.....YIEG....KDIDSILELYREVMSN.....-------....--
  76 PYEVCKERAIKRGMSEED.....FERR....------------WKKQmp...IEEKVKY....AD
  77 DPNIAYERIQKNRTQSDLfe...LEKY....KTFEQIALKYLKIFKK.....LE--KKI....NV
  78 NPAVLRERLKGRNWSEE-.....----....KLLENLEAEMLDVILV.....EALEHAS....EV
  79 DADVRLSRRIQRDTVER-.....GRN-....--IQNVLEQYTKFVKP.....-------....--
  80 HPRIIGERLRERGYSKEKig...-ENV....----------EAELVD.....AILIEAIdeheNV


             210       220       230       240       250
              |         |         |         |         |
   1 LVLDAD..LNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSKRQRVAR
   2 LVLDAD..LNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSKRQRVA-
   3 LVLDVT..EDFSENAARQEELMGQV-------------------------
   4 LVIEAD..HHMERM--------------LELFEQNRDRILTPENRKH---
   5 LVIEAD..HHMERM--------------LELFEQNRDRILTPENRKH---
   6 LVLDVN..DDFSEEVTKQEDLMREV-------------------------
   7 LVLDVT..EDFSENAARQEELMGQV-------------------------
   8 LVIEAD..HHMERM--------------LELFEQNRDRILTPENRKH---
   9 LVLDVN..DDFSEEVTKQEDLMREV-------------------------
  10 LVLDVN..DDFSEEVTKQEDLMREV-------------------------
  11 LVLDVT..EDFSENAARQEELMGQV-------------------------
  12 LVIEAD..HNLEKM--------------LELFEQNRARILTPENWKHW--
  13 LTLDVN..EDFKDKYESLVEKVKEFL------------------------
  14 LTLDVN..EDFKDKHESLVEKVKEFL------------------------
  15 LTLDVN..LDFKDKEESLVEKVKEFL------------------------
  16 QMVQLC..VQTVSIE-----------------------------------
  17 QMVQLC..VQTVSIE-----------------------------------
  18 EIVEVC..FNTKQI-TDLRSSKPSFLEKHVSIED----------------
  19 LEINGD..GDFIDDSNRQSSILSNIYDFI---------------------
  20 EIVEVC..FNAKHI-TDLSSSKPSFLAKHVSTE-----------------
  21 EIVEVC..FNAKHI-TDLSSSKPSFLAKHVSTE-----------------
  22 DIVKVC..AGLTTIT-----------------------------------
  23 ------..------------------------------------------
  24 ------..------------------------------------------
  25 ------..------------------------------------------
  26 ------..------------------------------------------
  27 ------..------------------------------------------
  28 ------..------------------------------------------
  29 EATEVC..LDIKT-------------------------------------
  30 VIVDAM..LSQTSVKTVF--------------------------------
  31 VIVDAM..LSQTSVKTVF--------------------------------
  32 ------..------------------------------------------
  33 ------..------------------------------------------
  34 DMVSVCc.CDVTLNDICIMRSM----------------------------
  35 LKLRIEd.YDLLNDENSIENIVDQIASVIHD-------------------
  36 ------..------------------------------------------
  37 ------..------------------------------------------
  38 QMVQLC..VQTTNIP-----------------------------------
  39 DIVKVC..AGLTTIT-----------------------------------
  40 DIVKVC..AGLTTIT-----------------------------------
  41 LIIDGE..EDFIFDPCAKKKLINEVTEFI---------------------
  42 SYDNIN..IFSEEDRNKVISL-----------------------------
  43 ERVDAS..RSREEIVDRVIEI-----------------------------
  44 VRVDGDa.LDFVHDPQAFEWVCGR--------------------------
  45 MMIDGDk.YDFVANEDARRKVINAIDQKLIDI------------------
  46 LAYDWTkpGDTDAVVEDIERLDLDFFEWHS--------------------
  47 EAQDAE..KVVEDIE-----------------------------------
  48 WLIDW-..------------------------------------------
  49 MKIDGNs.LDFVQNPQDLATVLKMID------------------------
  50 TIIDGS..NTIEEVEFDVKTAINNF-------------------------
  51 EAQDSK..KVVEDIE-----------------------------------
  52 MTIDGDk.LDFMASEEDRQEVLNQIVAKLKEMGK----------------
  53 LTVDGDs.KDFVLNKSDFERIAAHV-------------------------
  54 LILEAGn.YDFVANEADQQAIFDQIDAA----------------------
  55 KFIDAS..KNEDEVEEDFMNQVKDF-------------------------
  56 CIIDAK..LPIVTIIKMILE------------------------------
  57 CRLDAS..LPVEQLHQAIITKVEE--------------------------
  58 CIVNAN..QSVESITKQVLEVL----------------------------
  59 CRLDAS..LPVEQLHQAIITKVEE--------------------------
  60 VVLDAN..NSVEQNVDEVTKILQK--------------------------
  61 WRDDW-..------------------------------------------
  62 WRADL-..------------------------------------------
  63 VVINAE..QSIELVQADIESAVKN--------------------------
  64 ITLDAS..SSLEDVHSQIVDLVSNV-------------------------
  65 ------..------------------------------------------
  66 YVVDAS..KDKNEVLEQAIKII----------------------------
  67 KVIRVE..GVRGGVERGIEDVQGEIAE-----------------------
  68 KFINTN..RPIEETRREIERILSEL-------------------------
  69 VVINAE..QSIELVQADIESAVKN--------------------------
  70 ITLDASs.YALEDVDSQIVDLVSNV-------------------------
  71 IKEKAD..IVIV--------------------------------------
  72 VVVDAS..KPLEEVKEEVRKVIESFL------------------------
  73 FVVDAE..LDVKAQIELIMNKLNSI-------------------------
  74 IKEKAD..FVILNE------------------------------------
  75 ------..------------------------------------------
  76 YVIDNS..GSIEETYKQVKKVYE---------------------------
  77 I-----..------------------------------------------
  78 YEIDTTe.MSLEEVIEAVEAIIR---------------------------
  79 ------..------------------------------------------
  80 IEVDTTn.KTPEEIVEEIIGLIK---------------------------