# TARGET T0116-500-end # Using neural net overrep-2500-IDaa13-5-10-7-10-5-10-11-ehl2-seeded9-stride-trained.net # This is a 4-layer network, with # window units # 5 10 # 7 10 # 5 10 # 11 3 (1 EHL2 ) # The input amino acid frequencies were determined from # alignment T0116-500-end.t2k.a2m.gz # with weighted counts, using EntropyWeight(1.4 bits/column, 10) # The weighting was determined by the posterior distribution # after regularizing with /projects/compbio/lib/recode3.20comp. # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 53.9247 # # CHAIN 1 Pos AA E H C 10N 1S 5N 5N 5N 1 E 0.007 0.952 0.041 2 V 0.004 0.979 0.018 3 F 0.001 0.990 0.009 4 L 0.001 0.994 0.006 5 E 0.001 0.995 0.005 6 V 0.001 0.994 0.006 7 R 0.001 0.991 0.009 8 E 0.001 0.991 0.008 9 R 0.001 0.983 0.016 10 A 0.001 0.973 0.026 11 K 0.001 0.971 0.029 12 R 0.001 0.968 0.032 13 Q 0.001 0.956 0.044 14 A 0.001 0.935 0.065 15 E 0.001 0.963 0.037 16 A 0.001 0.968 0.032 17 L 0.001 0.978 0.022 18 R 0.001 0.982 0.017 19 E 0.001 0.983 0.016 20 A 0.001 0.981 0.019 21 A 0.001 0.976 0.024 22 R 0.001 0.981 0.019 23 I 0.001 0.980 0.020 24 L 0.001 0.983 0.017 25 A 0.001 0.992 0.008 26 E 0.001 0.994 0.006 27 L 0.001 0.994 0.005 28 D 0.001 0.993 0.006 29 V 0.001 0.996 0.003 30 Y 0.001 0.996 0.004 31 A 0.001 0.994 0.005 32 A 0.001 0.993 0.007 33 L 0.001 0.987 0.012 34 A 0.001 0.987 0.012 35 E 0.001 0.979 0.020 36 V 0.002 0.970 0.027 37 A 0.003 0.960 0.036 38 V 0.004 0.927 0.069 39 R 0.005 0.858 0.136 40 Y 0.009 0.464 0.527 41 G 0.008 0.015 0.977 42 Y 0.128 0.013 0.858 43 V 0.422 0.025 0.553 44 R 0.466 0.028 0.506 45 P 0.544 0.025 0.431 46 R 0.527 0.022 0.451 47 F 0.458 0.038 0.505 48 G 0.182 0.024 0.794 49 D 0.127 0.026 0.847 50 R 0.473 0.022 0.505 51 L 0.813 0.018 0.170 52 Q 0.902 0.015 0.082 53 I 0.899 0.023 0.078 54 R 0.721 0.046 0.233 55 A 0.343 0.079 0.578 56 G 0.131 0.041 0.828 57 R 0.148 0.020 0.832 58 H 0.129 0.010 0.861 59 P 0.276 0.055 0.669 60 V 0.443 0.082 0.475 61 V 0.466 0.149 0.385 62 E 0.471 0.088 0.441 63 R 0.456 0.068 0.475 64 R 0.289 0.075 0.637 65 T 0.166 0.035 0.798 66 E 0.303 0.026 0.671 67 F 0.403 0.026 0.571 68 V 0.321 0.032 0.646 69 P 0.260 0.039 0.701 70 N 0.226 0.078 0.696 71 D 0.510 0.063 0.427 72 L 0.769 0.032 0.199 73 E 0.859 0.017 0.124 74 M 0.745 0.022 0.233 75 A 0.281 0.008 0.711 76 H 0.152 0.007 0.841 77 E 0.326 0.003 0.671 78 L 0.883 0.001 0.115 79 V 0.976 0.001 0.023 80 L 0.989 0.001 0.009 81 I 0.957 0.002 0.040 82 T 0.765 0.004 0.231 83 G 0.330 0.010 0.661 84 P 0.099 0.051 0.850 85 N 0.050 0.135 0.815 86 M 0.064 0.171 0.765 87 A 0.040 0.204 0.756 88 G 0.030 0.301 0.670 89 K 0.026 0.603 0.371 90 S 0.018 0.920 0.062 91 T 0.009 0.979 0.012 92 F 0.006 0.988 0.006 93 L 0.002 0.995 0.002 94 R 0.001 0.999 0.001 95 Q 0.001 0.999 0.001 96 T 0.001 0.999 0.001 97 A 0.001 0.999 0.001 98 L 0.001 0.999 0.001 99 I 0.001 0.999 0.001 100 A 0.001 0.999 0.001 101 L 0.001 0.999 0.001 102 L 0.001 0.999 0.001 103 A 0.001 0.995 0.004 104 Q 0.001 0.978 0.021 105 V 0.002 0.917 0.081 106 G 0.010 0.419 0.571 107 S 0.056 0.206 0.738 108 F 0.107 0.131 0.761 109 V 0.145 0.055 0.800 110 P 0.120 0.033 0.847 111 A 0.044 0.417 0.539 112 E 0.032 0.478 0.490 113 E 0.063 0.425 0.512 114 A 0.106 0.174 0.720 115 H 0.176 0.134 0.690 116 L 0.336 0.098 0.566 117 P 0.161 0.107 0.732 118 L 0.118 0.702 0.180 119 F 0.143 0.717 0.140 120 D 0.132 0.764 0.104 121 G 0.458 0.485 0.057 122 I 0.591 0.372 0.036 123 Y 0.626 0.309 0.065 124 T 0.492 0.332 0.175 125 R 0.510 0.150 0.340 126 I 0.370 0.050 0.581 127 G 0.057 0.021 0.922 128 A 0.030 0.397 0.573 129 S 0.029 0.439 0.532 130 D 0.019 0.682 0.299 131 D 0.037 0.632 0.331 132 L 0.043 0.704 0.253 133 A 0.055 0.596 0.349 134 G 0.028 0.566 0.406 135 G 0.019 0.298 0.683 136 K 0.027 0.372 0.601 137 S 0.020 0.606 0.374 138 T 0.014 0.848 0.139 139 F 0.009 0.909 0.083 140 M 0.004 0.973 0.024 141 V 0.002 0.983 0.015 142 E 0.001 0.990 0.010 143 M 0.001 0.994 0.006 144 E 0.001 0.997 0.002 145 E 0.001 0.998 0.002 146 V 0.001 0.998 0.002 147 A 0.001 0.998 0.002 148 L 0.001 0.996 0.003 149 I 0.001 0.991 0.008 150 L 0.002 0.977 0.021 151 K 0.002 0.925 0.073 152 E 0.004 0.783 0.214 153 A 0.018 0.296 0.686 154 T 0.026 0.041 0.933 155 E 0.037 0.134 0.829 156 N 0.081 0.048 0.871 157 S 0.453 0.048 0.500 158 L 0.781 0.030 0.189 159 V 0.922 0.029 0.049 160 L 0.951 0.022 0.027 161 L 0.815 0.085 0.100 162 D 0.456 0.146 0.398 163 E 0.119 0.212 0.669 164 V 0.087 0.219 0.694 165 G 0.043 0.134 0.823 166 R 0.051 0.068 0.881 167 G 0.109 0.043 0.848 168 T 0.111 0.026 0.864 169 S 0.062 0.033 0.905 170 S 0.010 0.761 0.229 171 L 0.004 0.881 0.115 172 D 0.002 0.953 0.045 173 G 0.003 0.970 0.027 174 V 0.002 0.990 0.008 175 A 0.001 0.995 0.004 176 I 0.001 0.997 0.002 177 A 0.001 0.998 0.002 178 T 0.001 0.998 0.002 179 A 0.001 0.998 0.002 180 V 0.001 0.997 0.003 181 A 0.001 0.994 0.006 182 E 0.001 0.992 0.008 183 A 0.001 0.982 0.018 184 L 0.001 0.972 0.028 185 H 0.001 0.952 0.047 186 E 0.002 0.882 0.116 187 R 0.004 0.577 0.419 188 R 0.012 0.072 0.917 189 A 0.095 0.037 0.868 190 Y 0.460 0.027 0.514 191 T 0.922 0.020 0.058 192 L 0.962 0.018 0.019 193 F 0.955 0.018 0.027 194 A 0.789 0.050 0.161 195 T 0.356 0.095 0.549 196 H 0.095 0.172 0.733 197 Y 0.017 0.737 0.246 198 F 0.011 0.855 0.133 199 E 0.013 0.858 0.129 200 L 0.014 0.870 0.116 201 T 0.014 0.872 0.114 202 A 0.013 0.850 0.137 203 L 0.013 0.781 0.206 204 G 0.018 0.493 0.489 205 L 0.016 0.200 0.784 206 P 0.022 0.161 0.817 207 R 0.082 0.128 0.790 208 L 0.357 0.092 0.551 209 K 0.628 0.047 0.325 210 N 0.842 0.020 0.138 211 L 0.899 0.009 0.092 212 H 0.918 0.003 0.079 213 V 0.949 0.002 0.049 214 A 0.957 0.002 0.041 215 A 0.975 0.002 0.024 216 R 0.963 0.002 0.035 217 E 0.872 0.004 0.124 218 E 0.488 0.014 0.498 219 A 0.101 0.028 0.871 220 G 0.074 0.018 0.908 221 G 0.417 0.010 0.573 222 L 0.841 0.003 0.156 223 V 0.949 0.002 0.050 224 F 0.971 0.002 0.026 225 Y 0.964 0.004 0.032 226 H 0.954 0.004 0.042 227 Q 0.931 0.005 0.065 228 V 0.870 0.009 0.122 229 L 0.680 0.018 0.302 230 P 0.424 0.048 0.528 231 G 0.217 0.063 0.719 232 P 0.180 0.093 0.727 233 A 0.095 0.096 0.809 234 S 0.042 0.256 0.702 235 K 0.031 0.471 0.498 236 S 0.029 0.716 0.255 237 Y 0.014 0.904 0.082 238 G 0.007 0.970 0.023 239 V 0.004 0.989 0.007 240 E 0.003 0.994 0.003 241 V 0.002 0.995 0.002 242 A 0.001 0.997 0.002 243 A 0.001 0.996 0.003 244 M 0.001 0.990 0.009 245 A 0.001 0.957 0.042 246 G 0.002 0.028 0.969 247 L 0.013 0.013 0.974 248 P 0.011 0.052 0.936 249 K 0.001 0.947 0.053 250 E 0.001 0.986 0.014 251 V 0.001 0.992 0.008 252 V 0.001 0.991 0.008 253 A 0.001 0.995 0.004 254 R 0.001 0.995 0.005 255 A 0.001 0.992 0.007 256 R 0.001 0.991 0.009 257 A 0.001 0.987 0.013 258 L 0.001 0.975 0.024 259 L 0.001 0.953 0.046 260 Q 0.001 0.925 0.075 261 A 0.001 0.927 0.072 262 M 0.003 0.884 0.113 263 A 0.004 0.885 0.112 264 A 0.006 0.860 0.134 265 R 0.008 0.783 0.209 266 R 0.016 0.653 0.331 267 E 0.026 0.635 0.340 268 G 0.041 0.667 0.292 269 A 0.071 0.616 0.313 270 L 0.081 0.618 0.301 271 D 0.058 0.615 0.327 272 A 0.040 0.584 0.376 273 V 0.027 0.587 0.386 274 L 0.022 0.637 0.340 275 E 0.017 0.701 0.282 276 R 0.015 0.705 0.281 277 L 0.010 0.773 0.217 278 L 0.006 0.828 0.166 279 A 0.004 0.856 0.140 280 L 0.003 0.865 0.132 281 D 0.003 0.873 0.124 282 P 0.003 0.862 0.135 283 D 0.003 0.853 0.144 284 R 0.002 0.880 0.118 285 L 0.002 0.883 0.116 286 T 0.001 0.888 0.110 287 P 0.001 0.959 0.040 288 L 0.001 0.974 0.025 289 E 0.001 0.981 0.018 290 A 0.001 0.972 0.027 291 L 0.001 0.968 0.031 292 R 0.001 0.957 0.042 293 L 0.001 0.948 0.051 294 L 0.001 0.920 0.079 295 Q 0.001 0.925 0.074 296 E 0.001 0.926 0.073 297 L 0.001 0.920 0.080 298 K 0.001 0.948 0.051 299 A 0.001 0.951 0.049 300 L 0.001 0.962 0.038 301 A 0.001 0.955 0.044 302 L 0.001 0.960 0.039 303 G 0.001 0.959 0.040 304 A 0.002 0.942 0.056 305 P 0.005 0.909 0.085 306 L 0.009 0.874 0.117 307 D 0.016 0.801 0.183 308 T 0.026 0.616 0.358 309 M 0.034 0.425 0.541 310 K 0.023 0.213 0.764 311 G 0.009 0.019 0.972