/cse/grads/rachelk/sum00/fragfinder/src/fragfinder \
	T0114.t2k-w0.5 -i T0114.t2k-w0.5.mod -db /projects/compbio/data/pdb/pdbaa -fraglen 9 -threshold 6
Reading parameter file T0114.t2k-w0.5.mod
T0114.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8279/tmp.a2m
SAM: /cse/grads/rachelk/sum00/fragfinder/src/fragfinder v3.2 (June, 2000) compiled 07/27/00_12:52:26
make: *** [T0114.t2k-w0.5.fragments] Segmentation Fault
make: Fatal error in reader: ../Make.main, line 277: More than one % pattern on right hand side
/cse/grads/rachelk/sum00/fragfinder/src/fragfinder \
	T0114.t2k-w0.5 -i T0114.t2k-w0.5.mod -db /projects/compbio/data/pdb/pdbaa -fraglen 9 -threshold 6
Reading parameter file T0114.t2k-w0.5.mod
T0114.t2k-w0.5.mod(21):  Reading MODEL --  Model from alignment file /projects/compbio/tmp/tmp-build-weighted-model-alpha-8279/tmp.a2m
SAM: /cse/grads/rachelk/sum00/fragfinder/src/fragfinder v3.2 (June, 2000) compiled 07/31/00_13:10:50
Error: (open_outputfile):  Could not open file T0114.t2k-w0.5.pdoc
gmake: *** [T0114.t2k-w0.5.fragments] Error 1