PFRMAT SS
TARGET T0085_1:209
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t85.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 27.8546
METHOD
MODEL 1
A C 0.85
D C 0.63
A C 0.65
P C 0.88
F C 0.81
E C 0.70
G C 0.77
R C 0.75
K C 0.51
K E 0.46
C C 0.51
S C 0.50
S C 0.54
C C 0.71
H C 0.72
K C 0.51
A C 0.42
Q H 0.39
A H 0.46
Q H 0.57
S H 0.70
W H 0.81
K H 0.73
D H 0.87
T H 0.92
A H 0.91
H H 0.82
A H 0.76
K H 0.57
A H 0.43
M C 0.52
E C 0.87
S C 0.83
L C 0.74
K C 0.85
P C 0.84
N C 0.58
V E 0.45
K C 0.45
K C 0.46
E C 0.54
A C 0.72
K C 0.78
Q C 0.61
K C 0.47
A C 0.42
K C 0.47
L C 0.54
D C 0.77
P C 0.82
A C 0.74
K C 0.66
D C 0.70
Y C 0.64
T C 0.62
Q C 0.59
D C 0.56
K C 0.65
D C 0.89
C C 0.91
V C 0.72
G C 0.49
C E 0.56
H E 0.57
V C 0.54
D C 0.82
G C 0.91
F C 0.82
G C 0.72
Q C 0.76
K C 0.78
G C 0.73
G C 0.56
Y E 0.48
T E 0.56
I E 0.56
E E 0.48
S C 0.57
P C 0.64
K C 0.60
P C 0.50
M E 0.55
L C 0.54
T C 0.84
G C 0.85
V C 0.77
G C 0.84
C C 0.80
E C 0.55
S C 0.49
C C 0.68
H C 0.84
G C 0.85
P C 0.74
G C 0.61
R C 0.51
N C 0.52
F C 0.61
R C 0.60
G C 0.59
D C 0.57
H H 0.44
R H 0.44
K C 0.55
S C 0.79
G C 0.82
Q C 0.62
A E 0.50
F E 0.53
E E 0.47
K C 0.52
S C 0.67
G C 0.75
K C 0.63
K C 0.58
T C 0.57
P C 0.50
R C 0.53
K C 0.59
D C 0.61
L C 0.66
A C 0.69
K C 0.56
K C 0.64
G C 0.84
Q C 0.83
D C 0.63
F C 0.50
H C 0.48
F C 0.59
E C 0.64
E C 0.59
R C 0.62
C C 0.60
S C 0.52
A C 0.55
C C 0.73
H C 0.77
L C 0.69
N C 0.76
Y C 0.87
E C 0.85
G C 0.91
S C 0.95
P C 0.91
W C 0.70
K C 0.61
G C 0.66
A C 0.85
K C 0.89
A C 0.91
P C 0.80
Y C 0.73
T C 0.61
P E 0.48
F C 0.48
T C 0.57
P C 0.60
E C 0.63
V C 0.75
D C 0.90
A C 0.83
K C 0.75
Y C 0.71
T C 0.74
F C 0.63
K E 0.49
F C 0.48
D C 0.47
E H 0.62
M H 0.66
V H 0.55
K H 0.46
E C 0.52
V C 0.73
K C 0.85
A C 0.59
M E 0.45
H C 0.57
E C 0.62
H H 0.66
Y H 0.81
K H 0.77
L H 0.87
E H 0.89
G H 0.88
V H 0.81
F H 0.59
E C 0.69
G C 0.87
E C 0.92
P C 0.85
K C 0.62
F E 0.53
K E 0.57
F C 0.53
H C 0.70
D C 0.58
E E 0.47
F E 0.57
Q E 0.56
A C 0.49
S C 0.70
A C 0.79
K C 0.85
P C 0.85
A C 0.67
K C 0.61
K C 0.64
- C 0.70
- C 0.69
END