PFRMAT SS
TARGET gi|1729823|sp|P50183|T2N4_NEILA_223:238
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t84.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 4.81985
METHOD
MODEL 1
- C 0.89
- C 0.70
- C 0.51
- E 0.53
- E 0.58
- E 0.49
- C 0.55
- C 0.53
- C 0.55
- C 0.50
- C 0.41
- E 0.40
- E 0.46
- H 0.49
- H 0.63
- H 0.68
- H 0.63
- H 0.49
H H 0.36
Y C 0.41
N C 0.50
R E 0.46
S E 0.58
I E 0.53
S C 0.44
I C 0.50
P C 0.56
R H 0.59
W H 0.86
H H 0.93
E H 0.93
I H 0.95
A H 0.95
H H 0.92
- H 0.85
- H 0.61
- C 0.74
END