PFRMAT SS
TARGET T0083
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t83.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 26.2245
METHOD
MODEL 1
M C 0.83
I C 0.69
Q C 0.62
S C 0.49
Q C 0.50
I C 0.47
N H 0.58
R H 0.83
N H 0.82
I H 0.84
R H 0.89
L H 0.91
D H 0.79
L H 0.94
A H 0.97
D H 0.98
A H 0.98
I H 0.98
L H 0.96
L H 0.93
S H 0.88
K H 0.79
A H 0.74
K H 0.51
K C 0.67
D C 0.61
L H 0.44
S H 0.45
F H 0.92
A H 0.97
E H 0.98
I H 0.98
A H 0.97
D H 0.92
G H 0.76
T C 0.71
G C 0.80
L C 0.66
A C 0.52
E H 0.76
A H 0.88
F H 0.90
V H 0.96
T H 0.97
A H 0.96
A H 0.94
L H 0.84
L H 0.53
G C 0.63
Q C 0.87
Q C 0.83
A C 0.71
L C 0.79
P C 0.60
A H 0.88
D H 0.97
A H 0.97
A H 0.99
R H 0.99
L H 0.99
V H 0.98
G H 0.96
A H 0.92
K H 0.75
L C 0.57
D C 0.74
L C 0.63
D H 0.53
E H 0.82
D H 0.80
S H 0.77
I H 0.81
L H 0.80
L H 0.75
L H 0.54
Q C 0.72
M C 0.78
I C 0.90
P C 0.87
L C 0.54
R H 0.48
G H 0.46
C C 0.55
I C 0.58
D C 0.74
D C 0.68
R C 0.70
I C 0.84
P C 0.93
T C 0.92
D C 0.85
P H 0.56
T H 0.80
M H 0.94
Y H 0.98
R H 0.97
F H 0.98
Y H 0.98
E H 0.98
M H 0.97
L H 0.93
Q H 0.84
V H 0.65
Y C 0.52
G C 0.56
T H 0.46
T H 0.48
L H 0.76
K H 0.79
A H 0.75
L H 0.65
V H 0.59
H H 0.54
E H 0.51
K C 0.59
F C 0.86
G C 0.92
D C 0.93
G C 0.85
I C 0.59
I C 0.46
S C 0.39
A H 0.39
I H 0.53
N H 0.47
F H 0.42
K C 0.46
L C 0.48
D C 0.43
V C 0.34
K H 0.38
K C 0.40
V C 0.53
A C 0.76
D C 0.90
P C 0.88
E C 0.87
G C 0.92
G C 0.90
E C 0.69
R E 0.66
A E 0.86
V E 0.93
I E 0.90
T E 0.79
L E 0.59
D C 0.56
G E 0.49
K E 0.70
Y E 0.85
L E 0.87
P E 0.81
T E 0.69
K C 0.49
P C 0.60
F C 0.69
END