PFRMAT SS
TARGET T0082
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t82.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 13.77
METHOD
MODEL 1
F C 0.87
D C 0.77
S E 0.57
F E 0.83
W E 0.92
F E 0.91
V E 0.86
Q E 0.73
Q E 0.47
W C 0.72
P C 0.80
P C 0.66
A C 0.52
V E 0.45
C C 0.47
S C 0.52
F C 0.69
Q C 0.88
K C 0.91
S C 0.84
G C 0.70
S C 0.61
C C 0.62
P C 0.76
G C 0.87
S C 0.92
G C 0.91
L C 0.91
R C 0.82
T C 0.66
F E 0.61
T E 0.84
I E 0.84
H E 0.75
G E 0.67
L E 0.61
W C 0.60
P C 0.77
Q C 0.76
Q C 0.80
S C 0.94
G C 0.92
T C 0.75
S C 0.53
L E 0.48
T E 0.43
N C 0.56
C C 0.83
P C 0.89
G C 0.89
S C 0.93
P C 0.85
F C 0.67
D C 0.56
I C 0.48
T C 0.52
K C 0.60
I C 0.58
S C 0.54
H C 0.50
L H 0.65
Q H 0.82
S H 0.91
Q H 0.86
L H 0.93
N H 0.93
T H 0.89
L H 0.53
W C 0.50
P C 0.56
N H 0.67
V H 0.53
L C 0.64
R C 0.74
A C 0.82
N C 0.95
N C 0.86
Q C 0.69
Q C 0.50
F H 0.47
W H 0.68
S H 0.87
H H 0.90
E H 0.84
W H 0.84
T H 0.74
K H 0.54
H C 0.62
G C 0.65
T C 0.61
C C 0.55
S C 0.55
E C 0.57
S C 0.61
T C 0.57
F C 0.52
N H 0.51
Q H 0.75
A H 0.83
A H 0.86
Y H 0.85
F H 0.91
K H 0.91
L H 0.84
A H 0.86
V H 0.87
D H 0.74
M H 0.73
R H 0.57
N C 0.51
N H 0.57
Y H 0.62
D H 0.54
I H 0.89
I H 0.94
G H 0.95
A H 0.94
L H 0.87
R H 0.70
P H 0.50
H C 0.84
A C 0.85
A C 0.71
G C 0.73
P C 0.82
N C 0.84
G C 0.89
R C 0.88
T C 0.72
K C 0.57
S C 0.57
R H 0.90
Q H 0.98
A H 0.99
I H 0.99
K H 1.00
G H 1.00
F H 0.99
L H 0.99
K H 0.98
A H 0.96
K H 0.86
F C 0.62
G C 0.87
K C 0.78
F C 0.83
P C 0.85
G C 0.61
L C 0.44
R C 0.49
C C 0.56
R C 0.61
T C 0.74
D C 0.78
P C 0.73
Q C 0.69
T C 0.80
K C 0.80
V C 0.56
S C 0.47
Y C 0.36
L H 0.48
V H 0.41
Q E 0.58
V E 0.66
V E 0.70
A E 0.76
C E 0.71
F E 0.46
A C 0.77
Q C 0.86
D C 0.86
G C 0.75
S C 0.70
T C 0.54
L E 0.53
I E 0.58
D C 0.48
C C 0.73
T C 0.80
R C 0.74
D C 0.72
T C 0.70
C C 0.71
G C 0.78
A C 0.87
N C 0.82
F C 0.80
I C 0.87
F C 0.86
END