PFRMAT SS
TARGET T0082_1:190
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t82.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 24.6376
METHOD
MODEL 1
F C 0.83
D C 0.74
S C 0.45
F E 0.73
W E 0.86
F E 0.87
V E 0.84
Q E 0.74
Q E 0.56
W C 0.55
P C 0.64
P C 0.55
A C 0.48
V C 0.55
C C 0.70
S C 0.70
F C 0.77
Q C 0.90
K C 0.91
S C 0.82
G C 0.71
S C 0.65
C C 0.61
P C 0.70
G C 0.80
S C 0.84
G C 0.84
L C 0.87
R C 0.81
T C 0.63
F E 0.66
T E 0.87
I E 0.86
H E 0.77
G E 0.70
L E 0.61
W C 0.61
P C 0.75
Q C 0.69
Q C 0.68
S C 0.90
G C 0.91
T C 0.77
S C 0.56
L E 0.45
T C 0.45
N C 0.59
C C 0.83
P C 0.88
G C 0.89
S C 0.92
P C 0.84
F C 0.69
D C 0.56
I C 0.43
T C 0.44
K C 0.50
I C 0.49
S C 0.53
H C 0.55
L H 0.62
Q H 0.79
S H 0.89
Q H 0.86
L H 0.92
N H 0.92
T H 0.86
L H 0.54
W H 0.48
P C 0.53
N H 0.61
V H 0.50
L C 0.61
R C 0.71
A C 0.80
N C 0.93
N C 0.82
Q C 0.66
Q C 0.50
F H 0.48
W H 0.68
S H 0.87
H H 0.91
E H 0.86
W H 0.87
T H 0.79
K H 0.59
H C 0.60
G C 0.65
T C 0.62
C C 0.51
S C 0.50
E C 0.56
S C 0.61
T C 0.56
F C 0.52
N H 0.48
Q H 0.74
A H 0.82
A H 0.86
Y H 0.85
F H 0.91
K H 0.91
L H 0.86
A H 0.88
V H 0.88
D H 0.77
M H 0.76
R H 0.62
N H 0.49
N H 0.61
Y H 0.65
D H 0.56
I H 0.90
I H 0.95
G H 0.95
A H 0.94
L H 0.88
R H 0.72
P H 0.52
H C 0.83
A C 0.84
A C 0.72
G C 0.75
P C 0.84
N C 0.85
G C 0.88
R C 0.86
T C 0.69
K C 0.49
S C 0.45
R H 0.92
Q H 0.98
A H 0.99
I H 0.99
K H 1.00
G H 1.00
F H 0.99
L H 0.99
K H 0.98
A H 0.96
K H 0.86
F C 0.59
G C 0.83
K C 0.79
F C 0.86
P C 0.87
G C 0.62
L C 0.46
R C 0.49
C C 0.53
R C 0.58
T C 0.72
D C 0.84
P C 0.77
Q C 0.70
T C 0.78
K C 0.78
V C 0.48
S H 0.49
Y H 0.49
L H 0.58
V H 0.47
Q E 0.54
V E 0.65
V E 0.71
A E 0.75
C E 0.68
F C 0.48
A C 0.81
Q C 0.90
D C 0.89
G C 0.74
S C 0.67
T C 0.50
L E 0.55
I E 0.58
D C 0.50
C C 0.78
T C 0.86
R C 0.84
D C 0.84
T C 0.79
C C 0.72
G C 0.76
A C 0.86
N C 0.78
F C 0.78
I C 0.87
F C 0.85
END