PFRMAT SS
TARGET T0081_1:152
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t81.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 17.0506
METHOD
MODEL 1
M C 0.70
E C 0.54
L C 0.58
T C 0.66
T H 0.53
R H 0.62
T H 0.57
L H 0.72
P H 0.79
A H 0.89
R H 0.88
K H 0.83
H H 0.76
I H 0.68
A H 0.68
L H 0.65
V H 0.60
A H 0.55
H H 0.54
D H 0.61
H H 0.63
C H 0.64
K H 0.92
Q H 0.97
M H 0.97
L H 0.99
M H 0.99
S H 0.99
W H 0.99
V H 0.99
E H 0.99
R H 0.99
H H 0.98
Q H 0.99
P H 0.99
L H 0.99
L H 0.98
E H 0.96
Q H 0.93
H H 0.80
V H 0.54
L E 0.49
Y E 0.67
A E 0.57
T C 0.63
G C 0.80
T C 0.80
T C 0.58
G C 0.49
N E 0.48
L E 0.56
I E 0.49
S C 0.50
R C 0.57
A C 0.69
T C 0.72
G C 0.66
M C 0.59
N C 0.53
V C 0.46
N C 0.48
A C 0.41
M C 0.49
L C 0.58
S C 0.74
G C 0.87
P C 0.87
M C 0.79
G C 0.93
G C 0.95
D C 0.90
Q C 0.63
Q C 0.61
V C 0.55
G C 0.48
A H 0.36
L E 0.49
I E 0.43
S H 0.43
E C 0.49
G C 0.83
K C 0.80
I C 0.50
D E 0.79
V E 0.92
L E 0.94
I E 0.90
F E 0.79
F E 0.55
W C 0.70
D C 0.87
P C 0.65
L H 0.48
N C 0.52
A C 0.64
V C 0.87
P C 0.94
H C 0.93
D C 0.85
P C 0.60
D C 0.49
V H 0.93
K H 0.98
A H 0.99
L H 0.99
L H 0.99
R H 0.98
L H 0.97
A H 0.96
T H 0.91
V H 0.75
W C 0.55
N C 0.69
I C 0.75
P C 0.77
V C 0.43
A E 0.44
T C 0.48
N C 0.61
V H 0.58
A H 0.76
T H 0.84
A H 0.96
D H 0.97
F H 0.98
I H 0.97
I H 0.97
Q H 0.93
S H 0.88
P H 0.77
H H 0.53
F C 0.55
N C 0.79
D C 0.75
A C 0.59
V C 0.53
D C 0.53
I C 0.45
L C 0.44
I C 0.45
P C 0.48
D C 0.66
Y H 0.59
Q H 0.84
R H 0.88
Y H 0.72
L H 0.76
A H 0.80
D H 0.82
R H 0.67
L C 0.55
K C 0.82
END