PFRMAT SS
TARGET T0080_1:219
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t80.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 7.86534
METHOD
MODEL 1
K C 0.90
G C 0.87
H C 0.66
L C 0.52
T C 0.46
R C 0.40
L C 0.52
G C 0.66
L C 0.45
E H 0.41
F C 0.47
F C 0.52
D H 0.47
Q H 0.55
P H 0.60
A H 0.91
V H 0.96
P H 0.99
L H 0.99
A H 0.99
R H 0.99
A H 0.99
F H 0.97
L H 0.92
G H 0.82
Q H 0.80
V H 0.71
L H 0.63
V H 0.58
R H 0.50
R C 0.41
L C 0.66
P C 0.86
N C 0.88
G C 0.89
T C 0.64
E E 0.77
L E 0.92
R E 0.95
G E 0.94
R E 0.93
I E 0.95
V E 0.94
E E 0.95
T E 0.95
E E 0.95
A E 0.94
Y E 0.87
L E 0.59
G C 0.85
P C 0.90
E C 0.78
D C 0.49
E H 0.61
A H 0.55
A H 0.47
H C 0.49
S C 0.66
R C 0.71
G C 0.84
G C 0.89
R C 0.75
Q C 0.73
T C 0.88
P C 0.83
R C 0.74
N C 0.66
R C 0.50
G E 0.54
M E 0.62
F E 0.54
M C 0.64
K C 0.84
P C 0.90
G C 0.83
T C 0.51
L E 0.77
Y E 0.89
V E 0.90
Y E 0.87
I E 0.82
I E 0.63
Y C 0.49
G C 0.74
M C 0.54
Y E 0.70
F E 0.85
C E 0.91
M E 0.88
N E 0.83
I E 0.77
S E 0.61
S C 0.56
Q C 0.83
G C 0.90
D C 0.94
G C 0.89
A E 0.50
C E 0.87
V E 0.95
L E 0.95
L E 0.91
R E 0.78
A E 0.49
L C 0.66
E C 0.88
P C 0.71
L C 0.55
E C 0.72
G C 0.60
L H 0.81
E H 0.92
T H 0.90
M H 0.96
R H 0.98
Q H 0.97
L H 0.94
R H 0.92
S H 0.90
T H 0.88
L H 0.79
R H 0.63
K C 0.51
G C 0.81
T C 0.84
A C 0.73
S C 0.64
R C 0.55
V C 0.50
L C 0.53
K C 0.59
D C 0.42
R H 0.49
E H 0.56
L H 0.52
C C 0.45
S C 0.83
G C 0.94
P C 0.68
S H 0.80
K H 0.80
L H 0.86
C H 0.91
Q H 0.91
A H 0.81
L H 0.59
A C 0.58
I C 0.57
N C 0.69
K C 0.71
S C 0.66
F C 0.74
D C 0.87
Q C 0.64
R C 0.53
D C 0.47
L C 0.42
A C 0.52
Q C 0.66
D C 0.85
E C 0.83
A C 0.60
V E 0.59
W E 0.67
L E 0.60
E C 0.48
R C 0.76
G C 0.92
P C 0.86
L C 0.74
E C 0.83
P C 0.88
S C 0.91
E C 0.88
P C 0.82
A C 0.51
V E 0.71
V E 0.79
A E 0.70
A C 0.55
A C 0.58
R C 0.48
V C 0.52
G C 0.58
V C 0.56
G C 0.56
H C 0.59
A C 0.51
G H 0.70
E H 0.81
W H 0.66
A C 0.56
R C 0.76
K C 0.89
P C 0.85
L E 0.70
R E 0.94
F E 0.97
Y E 0.96
V E 0.86
R E 0.53
G C 0.79
S C 0.94
P C 0.88
W C 0.49
V E 0.61
S E 0.62
V E 0.54
V H 0.38
D H 0.59
R H 0.72
V H 0.74
A H 0.79
E H 0.78
Q H 0.68
D C 0.51
T C 0.66
Q C 0.71
A C 0.78
END