PFRMAT SS
TARGET T0076_7:140
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t76.t98_6_subtree.retrain_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 3.6165
METHOD
METHOD The first 6 residues were takend from t76.t98_6_subtree.retrain_1.a2m.gz,
METHOD which had fewer homologs but had not yet misaligned T0076
MODEL 1
S C 0.76
T C 0.85
D C 0.87
D C 0.86
S C 0.90
P C 0.77
Y H 0.98
K H 0.98
Q H 0.97
A H 0.94
F H 0.87
S H 0.65
L H 0.49
F C 0.45
D C 0.68
R C 0.67
H C 0.80
G C 0.86
T C 0.86
G C 0.73
R C 0.48
I E 0.54
P E 0.51
K H 0.37
T H 0.56
S H 0.60
I H 0.89
G H 0.95
D H 0.96
L H 0.96
L H 0.95
R H 0.91
A H 0.86
C H 0.59
G C 0.70
Q C 0.78
N C 0.91
P C 0.92
T C 0.77
L H 0.54
A H 0.68
E H 0.66
I H 0.72
T H 0.76
E H 0.65
I H 0.54
E C 0.50
S C 0.83
T C 0.87
L C 0.79
P C 0.87
A C 0.83
E C 0.58
V C 0.47
D C 0.52
M H 0.47
E H 0.70
Q H 0.73
F H 0.62
L H 0.56
Q C 0.47
V H 0.64
L H 0.80
N H 0.82
R H 0.78
P H 0.63
N C 0.57
G C 0.72
F C 0.78
D C 0.80
M C 0.78
P C 0.74
G C 0.70
D C 0.68
P H 0.87
E H 0.95
E H 0.95
F H 0.95
V H 0.92
K H 0.75
G H 0.51
F C 0.51
Q C 0.49
V E 0.50
F C 0.52
D C 0.73
K C 0.64
D C 0.71
A C 0.87
T C 0.90
G C 0.83
M C 0.50
I E 0.54
G E 0.42
V H 0.67
G H 0.91
E H 0.94
L H 0.98
R H 0.99
Y H 1.00
V H 0.99
L H 0.99
T H 0.99
S H 0.95
L H 0.87
G H 0.85
E H 0.88
K H 0.75
L C 0.69
S C 0.61
N H 0.92
E H 0.98
E H 0.97
M H 0.98
D H 0.99
E H 0.99
L H 0.96
L H 0.87
K H 0.54
G C 0.75
V C 0.79
P C 0.73
V C 0.81
K C 0.86
D C 0.89
G C 0.85
M C 0.58
V C 0.41
N C 0.43
Y H 0.88
H H 0.97
D H 0.99
F H 0.99
V H 0.99
Q H 0.97
M H 0.94
I H 0.85
L H 0.63
A C 0.53
N C 0.74
END