PFRMAT SS
TARGET T0076_3:140
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t76.t98_1.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 4.21664
METHOD
METHOD First 6 residues and TSI in second pocket were taken from t76.seq,
METHOD because alignment had insertions disrupting those places.
MODEL 1
S C 0.77
T C 0.86
D C 0.87
D C 0.86
S C 0.90
P C 0.75
Y H 0.99
K H 0.99
Q H 0.98
A H 0.95
F H 0.88
S H 0.72
L H 0.57
F C 0.43
D C 0.64
R C 0.69
H C 0.86
G C 0.90
T C 0.93
G C 0.85
R C 0.58
I E 0.51
P E 0.50
T C 0.67
S C 0.71
I H 0.46
G H 0.98
D H 0.99
L H 0.98
L H 0.98
R H 0.96
A H 0.93
C H 0.75
G C 0.70
Q C 0.80
N C 0.90
P C 0.93
T C 0.74
L H 0.71
A H 0.85
E H 0.78
I H 0.86
T H 0.92
E H 0.91
I H 0.85
E H 0.65
S C 0.76
T C 0.87
L C 0.93
P C 0.96
A C 0.86
E C 0.52
V E 0.57
D E 0.53
M H 0.43
E H 0.83
Q H 0.93
F H 0.96
L H 0.97
Q H 0.96
V H 0.95
L H 0.95
N H 0.92
R H 0.87
P H 0.79
N H 0.61
G H 0.49
F C 0.59
D C 0.77
M C 0.80
P C 0.78
G C 0.86
D C 0.73
P H 0.89
E H 0.96
E H 0.97
F H 0.97
V H 0.97
K H 0.94
G H 0.87
F H 0.70
Q H 0.39
V E 0.45
F C 0.45
D C 0.66
K C 0.64
D C 0.73
A C 0.88
T C 0.92
G C 0.82
M C 0.53
I E 0.44
G C 0.40
V H 0.78
G H 0.94
E H 0.96
L H 0.98
R H 0.99
Y H 0.99
V H 0.99
L H 0.99
T H 0.97
S H 0.89
L H 0.80
G H 0.78
E H 0.81
K H 0.66
L C 0.78
S C 0.78
N H 0.87
E H 0.97
E H 0.95
M H 0.98
D H 0.99
E H 0.99
L H 0.98
L H 0.94
K H 0.83
G H 0.71
V C 0.51
P C 0.78
V C 0.91
K C 0.93
D C 0.94
G C 0.87
M C 0.55
V C 0.42
N C 0.51
Y H 0.82
H H 0.96
D H 0.99
F H 0.99
V H 0.98
Q H 0.97
M H 0.95
I H 0.88
L H 0.68
A C 0.53
N C 0.76
END