PFRMAT SS
TARGET T0071_1:238
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t71.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 3.17834
METHOD
MODEL 1
S C 0.89
E C 0.74
D C 0.75
N C 0.74
F C 0.59
A E 0.41
R E 0.65
F E 0.73
V E 0.69
C E 0.54
K C 0.67
N C 0.91
N C 0.88
G E 0.56
V E 0.88
L E 0.92
F E 0.87
E E 0.65
N C 0.71
Q C 0.70
L E 0.62
L E 0.85
Q E 0.92
I E 0.86
G E 0.64
L E 0.55
K C 0.46
S H 0.59
E H 0.69
F H 0.67
R H 0.64
Q C 0.52
N C 0.73
L C 0.73
G C 0.75
R C 0.46
M E 0.75
F E 0.85
I E 0.88
F E 0.82
Y E 0.55
G C 0.85
N C 0.87
K C 0.79
T C 0.72
S C 0.61
T C 0.57
Q C 0.44
F C 0.40
L C 0.56
N C 0.60
F C 0.71
T C 0.84
P C 0.68
T C 0.46
L E 0.44
I E 0.44
C C 0.61
A C 0.77
D C 0.63
D H 0.53
L H 0.58
Q H 0.49
T C 0.43
N C 0.44
L C 0.39
N E 0.43
L E 0.49
Q E 0.49
T C 0.44
K C 0.60
P C 0.64
V C 0.66
D C 0.76
P C 0.78
T C 0.65
V C 0.55
D C 0.65
G C 0.78
G C 0.79
A C 0.52
Q E 0.35
V H 0.42
Q H 0.45
Q E 0.45
V E 0.47
I E 0.38
N E 0.35
I H 0.55
E H 0.66
C H 0.64
I H 0.86
S H 0.91
D H 0.92
F H 0.76
T C 0.52
E C 0.74
A C 0.90
P C 0.83
V E 0.66
L E 0.88
N E 0.95
I E 0.96
Q E 0.96
F E 0.92
R E 0.83
Y E 0.59
G C 0.74
G C 0.80
T C 0.56
F E 0.53
Q E 0.57
N E 0.64
V E 0.66
S E 0.64
V E 0.71
K E 0.72
L E 0.60
P C 0.50
I E 0.48
T E 0.49
L H 0.39
N H 0.64
K H 0.69
F H 0.48
F C 0.66
Q C 0.78
P C 0.71
T C 0.48
E H 0.60
M H 0.61
A C 0.48
S H 0.80
Q H 0.93
D H 0.95
F H 0.95
F H 0.96
Q H 0.94
R H 0.91
W H 0.86
K H 0.75
Q H 0.60
L C 0.53
S C 0.75
N C 0.70
P C 0.48
Q H 0.85
Q H 0.94
E H 0.95
V H 0.96
Q H 0.94
N H 0.87
I H 0.74
F H 0.63
K C 0.43
A C 0.51
K C 0.77
H C 0.89
P C 0.78
M C 0.53
D H 0.50
T H 0.75
E H 0.88
I H 0.89
T H 0.90
K H 0.90
A H 0.88
K H 0.84
I H 0.78
I H 0.62
G H 0.52
F C 0.56
G H 0.76
S H 0.78
A H 0.73
L H 0.68
L H 0.59
E C 0.45
E C 0.55
V C 0.78
D C 0.90
P C 0.88
N C 0.93
P C 0.62
A C 0.47
N C 0.49
F H 0.43
V H 0.38
G E 0.43
A E 0.58
G E 0.65
I E 0.69
I E 0.68
H E 0.55
T C 0.63
K C 0.79
T C 0.69
T C 0.69
Q C 0.56
I E 0.61
G E 0.74
C E 0.85
L E 0.90
L E 0.85
R E 0.74
L E 0.58
E C 0.64
P C 0.80
N C 0.81
L H 0.57
Q H 0.59
A H 0.49
Q E 0.40
M E 0.62
Y E 0.75
R E 0.85
L E 0.80
T E 0.70
L E 0.70
R E 0.56
T C 0.64
S C 0.85
K C 0.65
D H 0.65
T H 0.79
V H 0.85
S H 0.96
Q H 0.99
R H 0.98
L H 0.99
C H 0.99
E H 0.99
L H 0.97
L H 0.92
S H 0.77
E H 0.67
Q C 0.60
F C 0.71
END