PFRMAT SS
TARGET T0071_15:238
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t71.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 7.27405
METHOD
MODEL 1
- C 0.72
- C 0.53
- H 0.45
- E 0.41
- E 0.54
- E 0.60
- E 0.47
- C 0.60
- C 0.86
- C 0.91
- C 0.86
- C 0.83
- C 0.77
- C 0.59
V E 0.46
L E 0.50
F E 0.40
E C 0.58
N C 0.82
Q C 0.70
L C 0.47
L E 0.73
Q E 0.85
I E 0.78
G E 0.56
L C 0.65
K C 0.81
S C 0.54
E C 0.48
F C 0.45
R H 0.53
Q C 0.51
N C 0.73
L C 0.76
G C 0.81
R C 0.56
M E 0.62
F E 0.75
I E 0.80
F E 0.75
Y C 0.48
G C 0.88
N C 0.89
K C 0.82
T C 0.74
S C 0.62
T C 0.57
Q C 0.45
F C 0.43
L C 0.61
N C 0.65
F C 0.75
T C 0.89
P C 0.76
T C 0.51
L E 0.48
I E 0.48
C C 0.64
A C 0.84
D C 0.77
D C 0.54
L H 0.52
Q H 0.48
T H 0.46
N C 0.45
L C 0.42
N C 0.45
L C 0.41
Q C 0.41
T C 0.51
K C 0.74
P C 0.72
V C 0.76
D C 0.88
P C 0.83
T C 0.62
V C 0.47
D C 0.49
G C 0.59
G C 0.55
A H 0.47
Q H 0.50
V H 0.80
Q H 0.82
Q H 0.77
V H 0.59
I C 0.61
N C 0.74
I C 0.52
E E 0.44
C E 0.47
I E 0.41
S C 0.39
D C 0.43
F C 0.67
T C 0.79
E C 0.71
A C 0.65
P E 0.58
V E 0.87
L E 0.93
N E 0.96
I E 0.95
Q E 0.94
F E 0.89
R E 0.77
Y E 0.48
G C 0.83
G C 0.82
T C 0.54
F E 0.56
Q E 0.55
N E 0.53
V E 0.50
S C 0.50
V E 0.59
K E 0.61
L C 0.47
P C 0.61
I C 0.47
T C 0.55
L H 0.44
N H 0.64
K H 0.73
F H 0.47
F C 0.69
Q C 0.79
P C 0.71
T C 0.50
E H 0.64
M H 0.68
A H 0.54
S H 0.85
Q H 0.95
D H 0.96
F H 0.95
F H 0.95
Q H 0.92
R H 0.88
W H 0.78
K H 0.56
Q C 0.48
L C 0.65
S C 0.82
N C 0.75
P C 0.56
Q H 0.81
Q H 0.92
E H 0.93
V H 0.94
Q H 0.93
N H 0.86
I H 0.74
F H 0.62
K C 0.49
A C 0.55
K C 0.79
H C 0.90
P C 0.79
M C 0.58
D C 0.54
T H 0.64
E H 0.80
I H 0.82
T H 0.79
K H 0.84
A H 0.84
K H 0.79
I H 0.62
I C 0.50
G C 0.67
F C 0.73
G C 0.55
S C 0.45
A E 0.54
L E 0.61
L E 0.63
E E 0.57
E E 0.44
V C 0.66
D C 0.87
P C 0.90
N C 0.92
P C 0.63
A H 0.54
N H 0.58
F H 0.65
V H 0.63
G H 0.69
A H 0.60
G H 0.57
I H 0.64
I H 0.51
H C 0.42
T C 0.71
K C 0.85
T C 0.76
T C 0.73
Q C 0.51
I E 0.76
G E 0.88
C E 0.93
L E 0.95
L E 0.89
R E 0.72
L E 0.61
E C 0.57
P C 0.74
N C 0.79
L H 0.62
Q H 0.65
A H 0.54
Q H 0.41
M E 0.57
Y E 0.72
R E 0.83
L E 0.78
T E 0.68
L E 0.67
R E 0.51
T C 0.65
S C 0.84
K C 0.55
D H 0.75
T H 0.83
V H 0.88
S H 0.97
Q H 0.99
R H 0.98
L H 0.99
C H 0.99
E H 0.99
L H 0.97
L H 0.91
S H 0.75
E H 0.62
Q C 0.62
F C 0.72
END