PFRMAT SS
TARGET T0071_1:238
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t71.remote_3.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 8.28331
METHOD
MODEL 1
S C 0.89
E C 0.75
D C 0.78
N C 0.76
F C 0.58
A E 0.45
R E 0.67
F E 0.72
V E 0.66
C E 0.52
K C 0.68
N C 0.91
N C 0.89
G E 0.49
V E 0.84
L E 0.89
F E 0.81
E E 0.54
N C 0.78
Q C 0.65
L E 0.62
L E 0.84
Q E 0.92
I E 0.85
G E 0.63
L C 0.54
K C 0.71
S C 0.48
E H 0.48
F H 0.52
R H 0.61
Q H 0.49
N C 0.65
L C 0.74
G C 0.85
R C 0.66
M E 0.58
F E 0.80
I E 0.88
F E 0.87
Y E 0.64
G C 0.84
N C 0.90
K C 0.85
T C 0.75
S C 0.61
T C 0.54
Q C 0.43
F C 0.42
L C 0.61
N C 0.65
F C 0.76
T C 0.89
P C 0.76
T C 0.50
L E 0.52
I E 0.51
C C 0.64
A C 0.83
D C 0.76
D C 0.52
L H 0.53
Q H 0.49
T H 0.47
N C 0.44
L C 0.41
N C 0.44
L C 0.40
Q E 0.41
T C 0.50
K C 0.70
P C 0.69
V C 0.73
D C 0.86
P C 0.82
T C 0.65
V C 0.50
D C 0.53
G C 0.62
G C 0.58
A C 0.45
Q H 0.49
V H 0.75
Q H 0.75
Q H 0.68
V H 0.52
I C 0.49
N C 0.54
I C 0.42
E C 0.41
C E 0.39
I H 0.36
S H 0.43
D H 0.49
F C 0.59
T C 0.71
E C 0.71
A C 0.78
P C 0.63
V E 0.78
L E 0.91
N E 0.95
I E 0.95
Q E 0.94
F E 0.89
R E 0.77
Y E 0.52
G C 0.78
G C 0.82
T C 0.58
F E 0.50
Q E 0.52
N E 0.59
V E 0.59
S E 0.57
V E 0.65
K E 0.65
L E 0.51
P C 0.58
I C 0.44
T C 0.45
L H 0.40
N H 0.66
K H 0.73
F H 0.51
F C 0.66
Q C 0.80
P C 0.71
T C 0.46
E H 0.63
M H 0.68
A H 0.53
S H 0.85
Q H 0.95
D H 0.96
F H 0.95
F H 0.95
Q H 0.93
R H 0.90
W H 0.81
K H 0.61
Q C 0.46
L C 0.63
S C 0.81
N C 0.73
P C 0.53
Q H 0.82
Q H 0.93
E H 0.94
V H 0.95
Q H 0.94
N H 0.87
I H 0.76
F H 0.64
K C 0.46
A C 0.53
K C 0.79
H C 0.90
P C 0.78
M C 0.56
D C 0.51
T H 0.67
E H 0.82
I H 0.84
T H 0.82
K H 0.85
A H 0.83
K H 0.76
I H 0.58
I C 0.50
G C 0.66
F C 0.72
G C 0.52
S E 0.54
A E 0.69
L E 0.77
L E 0.76
E E 0.67
E E 0.49
V C 0.68
D C 0.88
P C 0.89
N C 0.91
P C 0.58
A H 0.59
N H 0.62
F H 0.68
V H 0.65
G H 0.70
A H 0.60
G H 0.55
I H 0.61
I H 0.48
H C 0.42
T C 0.71
K C 0.85
T C 0.75
T C 0.72
Q C 0.51
I E 0.76
G E 0.88
C E 0.93
L E 0.95
L E 0.89
R E 0.71
L E 0.61
E C 0.56
P C 0.74
N C 0.79
L H 0.61
Q H 0.63
A H 0.52
Q H 0.39
M E 0.59
Y E 0.73
R E 0.84
L E 0.78
T E 0.68
L E 0.67
R E 0.52
T C 0.65
S C 0.84
K C 0.54
D H 0.76
T H 0.84
V H 0.88
S H 0.97
Q H 0.99
R H 0.98
L H 0.99
C H 0.99
E H 0.99
L H 0.97
L H 0.91
S H 0.76
E H 0.64
Q C 0.61
F C 0.72
END