PFRMAT SS
TARGET T0071_1:238
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t71.remote_2.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 5.93675
METHOD
MODEL 1
S C 0.89
E C 0.75
D C 0.76
N C 0.75
F C 0.60
A E 0.43
R E 0.67
F E 0.74
V E 0.70
C E 0.55
K C 0.67
N C 0.91
N C 0.89
G E 0.54
V E 0.87
L E 0.91
F E 0.82
E E 0.57
N C 0.69
Q C 0.62
L E 0.59
L E 0.81
Q E 0.88
I E 0.76
G C 0.57
L C 0.55
K C 0.51
S H 0.56
E H 0.63
F H 0.63
R H 0.62
Q C 0.49
N C 0.68
L C 0.76
G C 0.86
R C 0.63
M E 0.70
F E 0.88
I E 0.93
F E 0.91
Y E 0.73
G C 0.80
N C 0.88
K C 0.83
T C 0.74
S C 0.61
T C 0.54
Q C 0.41
F C 0.40
L C 0.57
N C 0.61
F C 0.73
T C 0.86
P C 0.70
T C 0.46
L E 0.49
I E 0.50
C C 0.60
A C 0.78
D C 0.69
D H 0.47
L H 0.55
Q H 0.47
T C 0.42
N C 0.43
L C 0.39
N E 0.42
L E 0.47
Q E 0.48
T C 0.44
K C 0.60
P C 0.64
V C 0.66
D C 0.76
P C 0.77
T C 0.64
V C 0.55
D C 0.65
G C 0.78
G C 0.79
A C 0.52
Q E 0.35
V H 0.43
Q H 0.45
Q E 0.44
V E 0.47
I E 0.38
N E 0.36
I H 0.54
E H 0.64
C H 0.63
I H 0.85
S H 0.90
D H 0.90
F H 0.73
T C 0.54
E C 0.74
A C 0.90
P C 0.84
V E 0.68
L E 0.89
N E 0.95
I E 0.96
Q E 0.95
F E 0.92
R E 0.84
Y E 0.62
G C 0.71
G C 0.77
T C 0.54
F E 0.54
Q E 0.57
N E 0.64
V E 0.64
S E 0.62
V E 0.70
K E 0.71
L E 0.59
P C 0.51
I E 0.48
T E 0.48
L H 0.39
N H 0.66
K H 0.70
F H 0.49
F C 0.64
Q C 0.78
P C 0.66
T H 0.49
E H 0.59
M H 0.59
A C 0.52
S H 0.79
Q H 0.93
D H 0.95
F H 0.95
F H 0.96
Q H 0.95
R H 0.92
W H 0.87
K H 0.75
Q H 0.59
L C 0.53
S C 0.75
N C 0.69
P C 0.48
Q H 0.85
Q H 0.94
E H 0.95
V H 0.96
Q H 0.94
N H 0.86
I H 0.73
F H 0.62
K C 0.43
A C 0.51
K C 0.77
H C 0.89
P C 0.77
M C 0.52
D H 0.50
T H 0.75
E H 0.87
I H 0.89
T H 0.89
K H 0.90
A H 0.88
K H 0.84
I H 0.77
I H 0.62
G H 0.52
F C 0.56
G H 0.76
S H 0.80
A H 0.75
L H 0.71
L H 0.64
E H 0.49
E C 0.49
V C 0.76
D C 0.89
P C 0.88
N C 0.93
P C 0.63
A C 0.46
N C 0.48
F H 0.42
V H 0.35
G E 0.46
A E 0.60
G E 0.67
I E 0.72
I E 0.72
H E 0.59
T C 0.64
K C 0.81
T C 0.73
T C 0.76
Q C 0.65
I E 0.58
G E 0.74
C E 0.84
L E 0.87
L E 0.79
R E 0.66
L E 0.51
E C 0.65
P C 0.79
N C 0.82
L H 0.56
Q H 0.58
A H 0.48
Q E 0.40
M E 0.62
Y E 0.75
R E 0.84
L E 0.78
T E 0.68
L E 0.68
R E 0.53
T C 0.65
S C 0.84
K C 0.56
D H 0.74
T H 0.83
V H 0.87
S H 0.97
Q H 0.99
R H 0.98
L H 0.99
C H 0.99
E H 0.99
L H 0.97
L H 0.92
S H 0.77
E H 0.65
Q C 0.60
F C 0.71
END