PFRMAT SS
TARGET T0071_1:238
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded3-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t71.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 2.74367
METHOD
MODEL 1
S C 0.90
E C 0.76
D C 0.78
N C 0.76
F C 0.61
A E 0.42
R E 0.67
F E 0.74
V E 0.70
C E 0.55
K C 0.68
N C 0.92
N C 0.89
G E 0.54
V E 0.88
L E 0.92
F E 0.87
E E 0.65
N C 0.72
Q C 0.71
L E 0.61
L E 0.85
Q E 0.92
I E 0.86
G E 0.64
L E 0.55
K C 0.47
S H 0.56
E H 0.66
F H 0.64
R H 0.60
Q C 0.56
N C 0.76
L C 0.76
G C 0.77
R C 0.47
M E 0.76
F E 0.86
I E 0.89
F E 0.83
Y E 0.55
G C 0.86
N C 0.88
K C 0.81
T C 0.74
S C 0.63
T C 0.59
Q C 0.45
F C 0.41
L C 0.57
N C 0.62
F C 0.73
T C 0.85
P C 0.70
T C 0.47
L E 0.43
I E 0.43
C C 0.64
A C 0.78
D C 0.65
D H 0.52
L H 0.57
Q H 0.47
T C 0.45
N C 0.46
L C 0.41
N E 0.43
L E 0.49
Q E 0.50
T C 0.45
K C 0.62
P C 0.66
V C 0.69
D C 0.78
P C 0.80
T C 0.66
V C 0.57
D C 0.67
G C 0.80
G C 0.81
A C 0.55
Q E 0.37
V H 0.38
Q H 0.40
Q E 0.48
V E 0.50
I E 0.40
N E 0.37
I H 0.52
E H 0.63
C H 0.62
I H 0.85
S H 0.91
D H 0.91
F H 0.75
T C 0.54
E C 0.75
A C 0.91
P C 0.84
V E 0.66
L E 0.89
N E 0.95
I E 0.96
Q E 0.96
F E 0.92
R E 0.83
Y E 0.58
G C 0.76
G C 0.82
T C 0.58
F E 0.53
Q E 0.56
N E 0.64
V E 0.66
S E 0.65
V E 0.72
K E 0.73
L E 0.60
P C 0.51
I E 0.49
T E 0.50
L H 0.37
N H 0.62
K H 0.67
F H 0.46
F C 0.67
Q C 0.80
P C 0.72
T C 0.49
E H 0.59
M H 0.60
A C 0.50
S H 0.80
Q H 0.93
D H 0.95
F H 0.95
F H 0.96
Q H 0.94
R H 0.91
W H 0.86
K H 0.74
Q H 0.59
L C 0.54
S C 0.77
N C 0.73
P C 0.51
Q H 0.84
Q H 0.94
E H 0.95
V H 0.96
Q H 0.94
N H 0.87
I H 0.73
F H 0.62
K C 0.45
A C 0.53
K C 0.79
H C 0.90
P C 0.80
M C 0.55
D H 0.48
T H 0.74
E H 0.88
I H 0.89
T H 0.89
K H 0.89
A H 0.87
K H 0.83
I H 0.75
I H 0.58
G H 0.48
F C 0.60
G H 0.72
S H 0.75
A H 0.69
L H 0.64
L H 0.55
E C 0.48
E C 0.58
V C 0.80
D C 0.90
P C 0.89
N C 0.93
P C 0.65
A C 0.50
N C 0.52
F H 0.40
V H 0.35
G E 0.45
A E 0.60
G E 0.66
I E 0.70
I E 0.69
H E 0.56
T C 0.64
K C 0.80
T C 0.71
T C 0.72
Q C 0.59
I E 0.60
G E 0.74
C E 0.85
L E 0.90
L E 0.85
R E 0.74
L E 0.57
E C 0.66
P C 0.82
N C 0.83
L H 0.55
Q H 0.57
A H 0.48
Q E 0.40
M E 0.62
Y E 0.76
R E 0.85
L E 0.80
T E 0.71
L E 0.70
R E 0.56
T C 0.66
S C 0.86
K C 0.70
D H 0.58
T H 0.75
V H 0.83
S H 0.96
Q H 0.99
R H 0.98
L H 0.99
C H 0.99
E H 0.99
L H 0.97
L H 0.92
S H 0.77
E H 0.66
Q C 0.62
F C 0.73
END