PFRMAT SS
TARGET T0070_1:332
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t70.t98_3.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 5.25455
METHOD
MODEL 1
Q C 0.85
S C 0.84
S C 0.56
V E 0.63
T E 0.74
L E 0.80
F E 0.82
G E 0.77
I E 0.71
V E 0.56
D C 0.37
T C 0.57
N C 0.81
V C 0.63
A C 0.52
Y C 0.61
S C 0.75
R C 0.63
Y C 0.52
- C 0.49
- C 0.49
- C 0.59
- C 0.77
- C 0.87
- C 0.88
- C 0.80
- C 0.74
- C 0.64
- E 0.50
- E 0.58
- E 0.62
- E 0.51
- C 0.68
G C 0.75
L C 0.69
G C 0.81
S C 0.64
R E 0.61
L E 0.66
G E 0.56
L C 0.47
R C 0.71
G C 0.86
T H 0.65
E H 0.89
D H 0.87
L H 0.78
G H 0.63
G C 0.67
G C 0.81
L C 0.48
K E 0.83
A E 0.93
G E 0.96
F E 0.94
W E 0.93
L E 0.84
E E 0.61
G C 0.57
E C 0.60
I E 0.52
F E 0.62
G E 0.58
D C 0.54
D C 0.78
G C 0.90
N C 0.85
A C 0.76
S C 0.77
G C 0.86
F C 0.88
N C 0.78
F C 0.85
K C 0.84
R C 0.60
R C 0.53
S E 0.47
T E 0.65
V E 0.67
S E 0.61
L E 0.55
S C 0.54
G C 0.83
N C 0.89
F C 0.77
G C 0.60
E E 0.74
V E 0.88
R E 0.87
L E 0.73
G C 0.63
R C 0.68
D C 0.59
L C 0.57
V C 0.60
P C 0.52
T C 0.47
S C 0.54
Q C 0.68
K C 0.71
L C 0.82
T C 0.92
S C 0.80
Y C 0.79
D C 0.88
L C 0.71
F C 0.60
S C 0.62
A C 0.75
T C 0.88
G C 0.88
I C 0.82
G C 0.82
P C 0.65
F C 0.50
M C 0.54
G C 0.63
F C 0.65
R C 0.77
N C 0.57
W C 0.48
A C 0.51
A C 0.55
G C 0.50
Q H 0.50
G C 0.49
A C 0.46
D C 0.50
D C 0.62
N C 0.67
G C 0.59
I C 0.65
R C 0.69
A C 0.79
N C 0.87
N C 0.66
L E 0.72
I E 0.81
S E 0.77
Y E 0.64
Y C 0.70
T C 0.87
P C 0.78
N C 0.48
F C 0.58
G C 0.66
G C 0.74
F C 0.64
N C 0.58
A C 0.57
G C 0.54
F E 0.57
G E 0.71
Y E 0.73
A E 0.62
F C 0.54
D C 0.69
E C 0.72
K C 0.79
Q C 0.86
T C 0.83
I C 0.79
G C 0.87
T C 0.85
A C 0.85
D C 0.90
S C 0.90
V C 0.88
G C 0.83
R C 0.64
Y C 0.50
I E 0.53
G E 0.60
G E 0.53
Y C 0.52
V C 0.45
A C 0.43
Y C 0.46
D C 0.60
N C 0.82
G C 0.91
P C 0.84
L C 0.54
S H 0.43
A H 0.69
S H 0.79
L H 0.78
G H 0.80
L H 0.83
A H 0.79
Q H 0.80
Q H 0.77
K H 0.67
T H 0.49
A C 0.60
V C 0.65
G C 0.66
G C 0.70
L C 0.63
A C 0.67
T C 0.76
D C 0.66
R C 0.65
D C 0.55
E E 0.46
I E 0.58
T E 0.68
L E 0.66
G E 0.55
A C 0.55
S C 0.69
Y C 0.70
N C 0.72
F C 0.71
G C 0.73
V C 0.50
A H 0.48
K H 0.48
L H 0.65
S H 0.74
G H 0.84
L H 0.87
L H 0.88
Q H 0.91
Q H 0.92
T H 0.89
K H 0.85
F H 0.80
K H 0.72
R H 0.56
D C 0.56
I C 0.75
G C 0.90
G C 0.85
D C 0.85
I C 0.88
K C 0.79
T C 0.65
N C 0.47
S H 0.37
Y E 0.49
M E 0.58
L E 0.46
G E 0.45
A E 0.39
S H 0.49
A H 0.41
P C 0.42
V C 0.62
G C 0.89
G C 0.74
V C 0.67
G C 0.80
E C 0.73
V C 0.72
K C 0.81
L C 0.85
Q C 0.72
Y C 0.53
A C 0.49
L E 0.48
Y C 0.60
D C 0.82
Q C 0.76
K C 0.76
A C 0.79
I C 0.76
D C 0.85
S C 0.82
K C 0.74
A C 0.66
H C 0.51
Q E 0.78
I E 0.90
T E 0.92
L E 0.81
G E 0.51
Y E 0.55
V E 0.53
H E 0.45
N C 0.49
L C 0.55
S C 0.71
K C 0.54
R C 0.47
T H 0.46
A H 0.50
L H 0.56
Y H 0.53
G H 0.55
N H 0.51
L H 0.57
A H 0.63
F H 0.71
L H 0.74
K H 0.65
N C 0.49
K C 0.80
D C 0.83
A C 0.75
S C 0.73
T C 0.76
L C 0.75
G C 0.62
L C 0.52
Q C 0.51
A C 0.53
K C 0.61
G C 0.55
V C 0.46
Y C 0.49
A C 0.67
G C 0.86
G C 0.92
V C 0.85
Q C 0.78
A C 0.71
G C 0.68
E C 0.54
S C 0.48
Q C 0.50
T C 0.47
G C 0.40
V E 0.40
Q E 0.54
V E 0.54
G E 0.49
I E 0.49
R E 0.45
H C 0.43
A C 0.55
F C 0.66
END