PFRMAT SS
TARGET T0070
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t70.t98_2.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 5.87584
METHOD
MODEL 1
Q C 0.91
S C 0.93
S C 0.67
V E 0.68
T E 0.87
L E 0.92
F E 0.94
G E 0.92
I E 0.87
V E 0.75
D E 0.50
T C 0.55
N C 0.71
V C 0.58
A C 0.46
Y C 0.55
V C 0.77
N C 0.69
K C 0.65
D C 0.71
A C 0.72
A C 0.84
G C 0.86
D C 0.90
S C 0.78
R C 0.52
Y E 0.46
G E 0.51
L E 0.52
G C 0.50
T C 0.71
S C 0.83
G C 0.78
A C 0.68
S C 0.70
T C 0.85
S C 0.78
R C 0.51
L C 0.47
G C 0.57
L C 0.54
R C 0.71
G C 0.82
T H 0.65
E H 0.88
D H 0.87
L H 0.72
G C 0.57
G C 0.80
G C 0.88
L E 0.48
K E 0.88
A E 0.96
G E 0.97
F E 0.94
W E 0.89
L E 0.78
E E 0.51
G C 0.72
E C 0.79
I C 0.72
F C 0.64
G C 0.69
D C 0.84
D C 0.86
G C 0.87
N C 0.91
A C 0.88
S C 0.80
G C 0.76
F C 0.68
N C 0.54
F C 0.63
K C 0.73
R C 0.65
R C 0.65
S E 0.47
T E 0.72
V E 0.75
S E 0.66
L E 0.54
S C 0.65
G C 0.87
N C 0.90
F C 0.80
G C 0.59
E E 0.83
V E 0.92
R E 0.91
L E 0.78
G C 0.60
R C 0.65
D C 0.62
L C 0.66
V C 0.73
P C 0.58
T C 0.45
S H 0.46
Q C 0.41
K C 0.43
L C 0.63
T C 0.79
S C 0.65
Y C 0.57
D C 0.58
L C 0.48
F C 0.50
S C 0.45
A C 0.52
T C 0.74
G C 0.86
I C 0.82
G C 0.74
P C 0.61
F C 0.52
M C 0.63
G C 0.74
F C 0.63
R C 0.62
N C 0.67
W C 0.62
A C 0.63
A C 0.78
G C 0.89
Q C 0.71
G C 0.66
A C 0.73
D C 0.70
D C 0.80
N C 0.85
G C 0.70
I C 0.65
R C 0.62
A C 0.68
N C 0.90
N C 0.81
L E 0.60
I E 0.81
S E 0.85
Y E 0.80
Y C 0.50
T C 0.87
P C 0.85
N C 0.49
F C 0.56
G C 0.74
G C 0.70
F C 0.45
N E 0.40
A C 0.42
G C 0.63
F C 0.48
G E 0.55
Y E 0.58
A E 0.52
F C 0.54
D C 0.77
E C 0.78
K C 0.84
Q C 0.88
T C 0.81
I C 0.78
G C 0.82
T C 0.62
A C 0.62
D C 0.82
S C 0.75
V C 0.65
G C 0.63
R C 0.50
Y C 0.46
I C 0.43
G C 0.50
G C 0.49
Y C 0.45
V E 0.48
A E 0.45
Y C 0.50
D C 0.74
N C 0.83
G C 0.90
P C 0.80
L C 0.46
S E 0.40
A E 0.45
S H 0.39
L C 0.39
G C 0.46
L H 0.48
A C 0.51
Q H 0.51
Q C 0.51
K C 0.65
T C 0.66
A C 0.74
V C 0.80
G C 0.87
G C 0.83
L C 0.67
A C 0.69
T C 0.77
D C 0.71
R C 0.55
D H 0.47
E H 0.49
I H 0.47
T H 0.40
L C 0.42
G C 0.70
A C 0.54
S C 0.48
Y C 0.48
N C 0.43
F H 0.48
G H 0.49
V H 0.72
A H 0.84
K H 0.85
L H 0.90
S H 0.90
G H 0.87
L H 0.82
L H 0.71
Q H 0.61
Q H 0.51
T C 0.53
K C 0.59
F C 0.63
K C 0.74
R C 0.84
D C 0.88
I C 0.84
G C 0.86
G C 0.83
D C 0.76
I C 0.60
K C 0.52
T C 0.60
N C 0.72
S C 0.54
Y E 0.59
M E 0.73
L E 0.64
G C 0.61
A E 0.53
S E 0.61
A E 0.51
P C 0.51
V C 0.60
G C 0.81
G C 0.71
V C 0.60
G C 0.53
E C 0.48
V E 0.38
K E 0.47
L E 0.45
Q E 0.46
Y E 0.40
A C 0.34
L C 0.42
Y C 0.59
D C 0.72
Q C 0.76
K C 0.72
A C 0.71
I C 0.73
D C 0.82
S C 0.82
K C 0.58
A C 0.51
H C 0.43
Q E 0.49
I E 0.60
T E 0.63
L E 0.46
G C 0.72
Y C 0.59
V C 0.54
H C 0.60
N C 0.62
L C 0.58
S C 0.72
K C 0.48
R H 0.48
T H 0.57
A H 0.65
L H 0.74
Y H 0.70
G H 0.70
N H 0.64
L H 0.65
A H 0.65
F H 0.64
L H 0.58
K C 0.50
N C 0.76
K C 0.85
D C 0.77
A C 0.75
S C 0.82
T C 0.76
L C 0.78
G C 0.81
L C 0.61
Q E 0.52
A E 0.57
K E 0.56
G E 0.57
V E 0.55
Y C 0.50
A C 0.70
G C 0.86
G C 0.89
V C 0.73
Q C 0.69
A C 0.75
G C 0.81
E C 0.77
S C 0.79
Q C 0.76
T C 0.64
G E 0.45
V E 0.64
Q E 0.75
V E 0.70
G E 0.54
I E 0.56
R E 0.52
H C 0.44
A C 0.58
F C 0.68
END