PFRMAT SS
TARGET T0069_13:156
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded3-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t69.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 82.5504
METHOD
MODEL 1
- C 0.90
- C 0.91
- C 0.87
- C 0.87
- C 0.88
- C 0.77
- C 0.70
- C 0.71
- C 0.56
- C 0.49
- C 0.51
- C 0.53
L C 0.68
D C 0.83
G C 0.72
H C 0.58
L C 0.51
R C 0.49
R C 0.47
F C 0.53
Q C 0.68
N C 0.83
A C 0.83
F C 0.78
S C 0.78
Q C 0.71
Y C 0.65
K C 0.65
K C 0.65
A C 0.56
V C 0.62
L C 0.75
F C 0.80
P C 0.84
D C 0.87
G C 0.62
Q E 0.45
A E 0.48
V C 0.66
G C 0.90
E C 0.88
K C 0.54
I E 0.84
F E 0.92
K E 0.93
T E 0.84
A E 0.52
G C 0.77
A C 0.78
V C 0.71
K C 0.72
S C 0.62
Y H 0.83
S H 0.96
D H 0.98
A H 0.98
E H 0.99
Q H 0.98
L H 0.96
C H 0.90
R H 0.87
E H 0.70
A C 0.67
K C 0.85
G C 0.88
Q C 0.67
L E 0.73
A E 0.78
S E 0.72
P E 0.46
R C 0.69
S H 0.66
S H 0.96
A H 0.99
E H 0.99
N H 0.99
E H 1.00
A H 0.99
V H 0.99
T H 0.99
Q H 0.98
M H 0.95
V H 0.83
R C 0.54
A C 0.68
Q C 0.83
E C 0.93
K C 0.90
N C 0.52
A E 0.85
Y E 0.93
L E 0.91
S E 0.77
M E 0.52
N C 0.69
D C 0.69
I C 0.75
S C 0.83
T C 0.82
E C 0.90
G C 0.89
R C 0.60
F E 0.82
T E 0.91
Y E 0.87
P E 0.64
T C 0.77
G C 0.93
E C 0.92
I C 0.64
L E 0.63
V E 0.77
Y E 0.80
S E 0.68
N E 0.51
W C 0.56
A C 0.71
D C 0.85
G C 0.92
E C 0.94
P C 0.95
N C 0.95
N C 0.88
S C 0.77
D C 0.76
E C 0.76
G C 0.86
Q C 0.94
P C 0.90
E C 0.84
N C 0.67
C E 0.73
V E 0.90
E E 0.94
I E 0.89
F E 0.64
P C 0.71
D C 0.91
G C 0.93
K C 0.69
W C 0.62
N C 0.77
D C 0.76
V C 0.70
P C 0.79
C C 0.75
S C 0.71
K C 0.71
Q C 0.72
L C 0.55
L E 0.68
V E 0.86
I E 0.88
C E 0.82
E E 0.70
F C 0.60
END