PFRMAT SS
TARGET T0068
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded3-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t68.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 11.2842
METHOD
MODEL 1
S C 0.81
D C 0.71
S C 0.67
R C 0.58
T C 0.62
V C 0.68
S C 0.74
E C 0.88
P C 0.81
K C 0.66
T C 0.55
P E 0.54
S E 0.58
S E 0.56
C E 0.47
T C 0.62
T C 0.73
L C 0.67
K C 0.66
A C 0.79
D C 0.91
S C 0.89
S C 0.81
T C 0.79
A C 0.62
T H 0.77
S H 0.94
T H 0.94
I H 0.98
Q H 0.99
K H 0.99
A H 0.99
L H 0.99
N H 0.97
N H 0.91
C H 0.52
D C 0.79
Q C 0.93
G C 0.96
K C 0.77
A E 0.86
V E 0.96
R E 0.97
L E 0.93
S E 0.69
A C 0.57
G C 0.54
S C 0.61
T C 0.70
S E 0.50
V E 0.71
F E 0.78
L E 0.68
S C 0.54
G C 0.82
P C 0.82
L C 0.54
S C 0.50
L C 0.64
P C 0.86
S C 0.91
G C 0.91
V C 0.76
S E 0.62
L E 0.84
L E 0.92
I E 0.90
D E 0.85
K E 0.72
G E 0.59
V E 0.66
T E 0.74
L E 0.82
R E 0.85
A E 0.72
V C 0.63
N C 0.86
N C 0.85
A C 0.66
K C 0.64
S C 0.60
F C 0.58
E C 0.65
N C 0.74
A C 0.82
P C 0.86
S C 0.82
S C 0.74
C C 0.72
G C 0.59
V C 0.53
V C 0.64
D C 0.70
K C 0.80
N C 0.89
G C 0.90
K C 0.90
G C 0.87
C C 0.80
D C 0.74
A C 0.55
F E 0.56
I E 0.71
T E 0.69
A E 0.51
V C 0.72
S C 0.75
T C 0.81
T C 0.90
N C 0.70
S E 0.56
G E 0.75
I E 0.73
Y C 0.50
G C 0.76
P C 0.78
G C 0.58
T E 0.67
I E 0.68
D C 0.49
G C 0.73
Q C 0.84
G C 0.79
G C 0.70
V C 0.48
K E 0.49
L E 0.56
Q E 0.48
D C 0.65
K C 0.89
K C 0.88
V C 0.78
S C 0.57
W E 0.55
W E 0.56
E E 0.47
L C 0.54
A C 0.63
A C 0.67
D C 0.75
A C 0.83
K C 0.90
V C 0.87
K C 0.84
K C 0.73
L C 0.67
K C 0.74
Q C 0.76
N C 0.83
T C 0.91
P C 0.87
R C 0.66
L E 0.49
I E 0.67
Q E 0.69
I E 0.56
N C 0.64
K C 0.71
S C 0.78
K C 0.85
N C 0.75
F C 0.63
T E 0.59
L E 0.59
Y C 0.58
N E 0.54
V E 0.71
S E 0.73
L E 0.69
I C 0.48
N C 0.83
S C 0.91
P C 0.82
N C 0.62
F E 0.62
H E 0.86
V E 0.88
V E 0.85
F E 0.68
S C 0.63
D C 0.77
G C 0.84
D C 0.88
G C 0.73
F E 0.54
T E 0.77
A E 0.79
W E 0.71
K E 0.74
T E 0.81
T E 0.85
I E 0.84
K E 0.66
T C 0.73
P C 0.87
S C 0.89
T C 0.92
A C 0.92
R C 0.94
N C 0.92
T C 0.90
D C 0.81
G E 0.63
I E 0.85
D E 0.88
P E 0.80
M E 0.59
S C 0.61
S C 0.82
K C 0.86
N C 0.52
I E 0.85
T E 0.94
I E 0.93
A E 0.86
Y E 0.66
S C 0.50
N C 0.46
I C 0.49
A C 0.66
T C 0.85
G C 0.90
D C 0.84
D C 0.73
N C 0.60
V E 0.61
A E 0.74
I E 0.63
K C 0.71
A C 0.90
Y C 0.93
K C 0.90
G C 0.92
R C 0.91
A C 0.84
E C 0.79
T C 0.83
R C 0.84
N C 0.55
I E 0.82
S E 0.93
I E 0.93
L E 0.87
H E 0.69
N E 0.53
D C 0.50
F C 0.71
G C 0.89
T C 0.88
G C 0.95
H C 0.87
G E 0.69
M E 0.94
S E 0.98
I E 0.98
G E 0.94
S E 0.82
E E 0.56
T C 0.75
M C 0.73
G C 0.59
V C 0.64
Y C 0.75
N E 0.53
V E 0.83
T E 0.89
V E 0.86
D E 0.72
D E 0.56
L E 0.52
K E 0.58
M E 0.54
N C 0.53
G C 0.74
T C 0.78
T C 0.87
N C 0.86
G E 0.53
L E 0.92
R E 0.97
I E 0.98
K E 0.95
S E 0.87
D E 0.63
K C 0.67
S C 0.85
A C 0.87
A C 0.90
G C 0.88
V C 0.55
V E 0.60
N E 0.62
G E 0.75
V E 0.82
R E 0.82
Y E 0.73
S E 0.60
N E 0.55
V E 0.54
V E 0.59
M E 0.49
K C 0.61
N C 0.74
V C 0.75
A C 0.84
K C 0.89
P C 0.83
I E 0.67
V E 0.89
I E 0.88
D E 0.78
T E 0.61
V C 0.47
Y C 0.56
E C 0.67
K C 0.79
K C 0.93
E C 0.93
G C 0.83
S C 0.92
N C 0.89
V E 0.55
P E 0.85
D E 0.92
W E 0.91
S E 0.82
D E 0.79
I E 0.82
T E 0.87
F E 0.77
K C 0.49
D C 0.62
V C 0.77
T C 0.89
S C 0.82
E C 0.86
T C 0.82
K C 0.75
G C 0.50
V E 0.84
V E 0.93
V E 0.96
L E 0.96
N E 0.89
G E 0.60
E C 0.82
N C 0.91
A C 0.93
K C 0.93
K C 0.80
P C 0.65
I C 0.62
E C 0.48
V E 0.64
T E 0.77
M E 0.73
K E 0.59
N E 0.59
V E 0.61
K E 0.66
L E 0.67
T E 0.54
S C 0.68
D C 0.91
S C 0.91
T C 0.86
W C 0.66
Q E 0.56
I E 0.74
K E 0.76
N E 0.64
V C 0.57
N C 0.68
V C 0.72
K C 0.86
K C 0.88
END