PFRMAT SS
TARGET T66_7_1:175
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t66_7.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 106.045
METHOD
MODEL 1
M C 0.90
I C 0.55
G H 0.86
Q H 0.96
R H 0.94
I H 0.98
K H 0.99
Q H 0.99
Y H 0.99
R H 0.98
K H 0.97
E H 0.89
K C 0.49
G C 0.60
Y H 0.55
S H 0.49
L H 0.95
S H 0.99
E H 0.99
L H 0.99
A H 0.99
E H 0.98
K H 0.94
A H 0.73
G H 0.48
V H 0.44
A H 0.54
K H 0.74
S H 0.79
Y H 0.75
L H 0.81
S H 0.85
S H 0.86
I H 0.83
E H 0.72
R C 0.55
N C 0.82
L C 0.77
Q C 0.77
T C 0.77
N C 0.85
P C 0.92
S C 0.64
I H 0.90
Q H 0.97
F H 0.95
L H 0.99
E H 1.00
K H 0.99
V H 0.99
S H 0.99
A H 0.98
V H 0.93
L H 0.72
D C 0.48
V C 0.45
S C 0.58
V H 0.77
H H 0.81
T H 0.81
L H 0.67
L C 0.49
D C 0.78
E C 0.82
K C 0.83
H C 0.63
E C 0.50
T C 0.44
E C 0.40
Y C 0.45
D C 0.71
G C 0.87
Q C 0.79
L C 0.82
D C 0.91
S C 0.65
E H 0.50
W H 0.54
E H 0.54
K H 0.44
L C 0.37
V E 0.42
R E 0.44
D E 0.43
A C 0.41
M C 0.53
T C 0.54
S C 0.61
G C 0.73
V C 0.82
S C 0.82
K H 0.48
K H 0.83
Q H 0.85
F H 0.91
R H 0.92
E H 0.90
F H 0.82
L H 0.57
D C 0.70
Y C 0.49
Q H 0.80
K H 0.88
W H 0.85
R H 0.77
K H 0.76
S H 0.68
Q H 0.67
K H 0.69
E H 0.58
E H 0.48
X H 0.53
X H 0.43
X C 0.38
X C 0.45
X C 0.62
X C 0.86
X C 0.88
M C 0.79
K C 0.73
N C 0.63
A E 0.48
K E 0.57
Q E 0.58
E E 0.46
H C 0.70
F C 0.88
E C 0.84
L C 0.80
D H 0.63
Q H 0.95
E H 0.98
W H 0.99
V H 0.99
E H 1.00
L H 0.99
M H 0.99
V H 0.99
E H 0.97
A H 0.90
K H 0.81
E H 0.59
A C 0.54
N C 0.69
I C 0.78
S C 0.89
P H 0.55
E H 0.86
E H 0.90
I H 0.90
R H 0.86
K H 0.80
Y H 0.66
L H 0.46
L C 0.41
L C 0.52
N C 0.72
K C 0.69
K C 0.70
S C 0.70
A C 0.71
H C 0.73
P C 0.82
G C 0.82
P C 0.76
A C 0.76
A C 0.76
R C 0.69
S C 0.57
H C 0.53
T C 0.48
V C 0.48
N C 0.67
P C 0.76
F C 0.77
END