PFRMAT SS
TARGET T0065_1:57
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded4-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t65.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 157.232
METHOD
MODEL 1
M C 0.71
K H 0.65
N H 0.56
A H 0.83
K H 0.95
Q H 0.96
E H 0.95
H H 0.97
F H 0.98
E H 0.95
L H 0.94
D H 0.96
Q H 0.98
E H 0.98
W H 0.98
V H 0.99
E H 0.99
L H 0.98
M H 0.98
V H 0.94
E H 0.92
A H 0.81
K H 0.63
E C 0.47
A C 0.78
N C 0.79
I C 0.79
S C 0.88
P H 0.85
E H 0.98
E H 0.98
I H 0.99
R H 0.99
K H 1.00
Y H 0.99
L H 0.99
L H 0.97
L H 0.93
N H 0.79
K H 0.50
K C 0.70
S C 0.88
A C 0.90
H C 0.80
P C 0.69
G C 0.61
P C 0.47
A H 0.42
A C 0.50
R C 0.65
S C 0.81
H C 0.82
T C 0.69
V E 0.59
N E 0.75
P E 0.60
F C 0.67
END