PFRMAT SS
TARGET T0053_1:264
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t53.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 45.809
METHOD
MODEL 1
M C 0.91
K C 0.75
K C 0.62
A C 0.60
L C 0.49
L E 0.61
V E 0.72
V E 0.67
S E 0.53
F C 0.48
G C 0.54
T C 0.52
S C 0.50
Y C 0.62
H C 0.70
D C 0.54
T C 0.74
C C 0.62
E C 0.50
K C 0.57
N C 0.70
I C 0.50
V C 0.40
A C 0.46
C C 0.57
E C 0.55
R C 0.50
D H 0.50
L C 0.50
A C 0.69
A C 0.82
S C 0.87
C C 0.84
P C 0.74
D H 0.62
R H 0.87
D H 0.96
L H 0.94
F H 0.94
R H 0.89
A H 0.77
F H 0.60
T C 0.58
S C 0.73
G C 0.66
M E 0.54
I E 0.74
I E 0.69
R E 0.53
K C 0.54
L C 0.70
R C 0.82
Q C 0.72
R C 0.77
D C 0.90
G C 0.80
I C 0.63
D C 0.59
I C 0.55
D C 0.65
T C 0.87
P C 0.68
L H 0.75
Q H 0.89
A H 0.90
L H 0.95
Q H 0.97
K H 0.97
L H 0.95
A H 0.91
A H 0.77
Q C 0.56
G C 0.78
Y C 0.72
Q C 0.54
D C 0.43
V H 0.38
A H 0.46
I H 0.47
Q C 0.41
S H 0.64
L H 0.64
H H 0.58
I H 0.43
I C 0.62
N C 0.77
G H 0.51
D H 0.88
E H 0.86
Y H 0.93
E H 0.97
K H 0.97
I H 0.96
V H 0.94
R H 0.89
E H 0.86
V H 0.83
Q H 0.75
L H 0.77
L H 0.82
R H 0.81
P H 0.79
L H 0.78
F H 0.62
T C 0.50
R C 0.52
L C 0.70
T C 0.86
L C 0.70
G C 0.57
V C 0.67
P C 0.77
L C 0.46
L H 0.60
S C 0.57
S C 0.86
H C 0.58
N H 0.78
D H 0.87
Y H 0.93
V H 0.96
Q H 0.97
L H 0.96
M H 0.95
Q H 0.92
A H 0.87
L H 0.85
R H 0.77
Q H 0.53
Q C 0.65
M C 0.80
P C 0.89
S C 0.71
L C 0.62
R C 0.62
Q C 0.64
T C 0.61
E C 0.55
K C 0.46
V E 0.44
V E 0.55
F E 0.56
M C 0.42
G C 0.77
H C 0.89
G C 0.78
A C 0.72
S C 0.70
H H 0.51
H H 0.57
A H 0.53
F H 0.53
A H 0.47
A C 0.51
Y C 0.51
A C 0.49
C C 0.45
L H 0.43
D H 0.44
H H 0.49
M C 0.43
M C 0.51
T C 0.53
A C 0.55
Q C 0.54
R C 0.62
F C 0.78
P C 0.69
A C 0.53
R E 0.43
V E 0.57
G E 0.61
A E 0.57
V E 0.43
E C 0.49
S C 0.60
Y C 0.78
P C 0.82
E C 0.70
V C 0.65
D C 0.54
I E 0.55
L E 0.65
I E 0.60
D E 0.53
S C 0.44
L C 0.60
R C 0.64
D C 0.62
E C 0.75
G C 0.78
V C 0.67
T C 0.56
G H 0.57
V H 0.70
H H 0.71
L H 0.67
M H 0.61
P H 0.61
L H 0.66
M H 0.74
L H 0.75
V H 0.71
A H 0.51
G C 0.69
D C 0.76
H C 0.69
A C 0.60
I C 0.49
N C 0.47
D C 0.43
M C 0.48
A C 0.56
S C 0.70
D C 0.85
D C 0.91
G C 0.95
D C 0.94
S C 0.86
W C 0.67
K C 0.59
M E 0.46
R E 0.61
F E 0.54
N C 0.63
A E 0.58
A E 0.70
G E 0.63
I C 0.51
P C 0.66
A C 0.75
T C 0.85
P C 0.74
W H 0.50
L H 0.51
S H 0.48
G H 0.45
L C 0.63
G C 0.77
E C 0.75
N C 0.88
P C 0.79
A C 0.64
I C 0.69
R C 0.70
A C 0.55
M C 0.56
F C 0.46
V E 0.49
A E 0.51
H E 0.49
L H 0.45
H H 0.66
Q H 0.80
A H 0.80
L H 0.80
N H 0.73
M H 0.64
A H 0.55
V H 0.59
E H 0.54
E H 0.47
A C 0.46
A C 0.58
END