PFRMAT SS
TARGET T0053_13:59
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t53-first.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 18.4541
METHOD
MODEL 1
- C 0.92
- C 0.74
- C 0.52
- E 0.68
- E 0.85
- E 0.91
- E 0.93
- E 0.92
- E 0.91
- E 0.90
- E 0.86
- E 0.70
S C 0.64
Y C 0.87
H C 0.92
D C 0.76
T C 0.74
C C 0.73
E C 0.60
K C 0.60
N C 0.56
I C 0.51
V C 0.49
A C 0.56
C C 0.62
E H 0.70
R H 0.93
D H 0.96
L H 0.97
A H 0.97
A H 0.96
S H 0.90
C H 0.70
P C 0.50
D C 0.55
R C 0.57
D H 0.53
L H 0.46
F H 0.44
R C 0.45
A C 0.65
F C 0.81
T C 0.80
S C 0.68
G C 0.51
M E 0.52
I E 0.56
I C 0.52
R C 0.70
K C 0.57
L C 0.47
R C 0.55
Q C 0.64
R C 0.69
D C 0.85
G C 0.88
I C 0.73
D C 0.59
I C 0.58
- C 0.64
END