PFRMAT SS
TARGET T0053_1:264
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded3-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t53.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 39.2489
METHOD
MODEL 1
M C 0.91
K C 0.79
K C 0.73
A C 0.64
L C 0.53
L E 0.48
V E 0.55
V E 0.47
S C 0.56
F C 0.67
G C 0.74
T C 0.62
S C 0.61
Y C 0.56
H C 0.53
D C 0.49
T C 0.53
C C 0.52
E C 0.57
K C 0.66
N C 0.79
I C 0.58
V C 0.53
A C 0.60
C C 0.60
E C 0.53
R C 0.48
D C 0.48
L C 0.49
A C 0.58
A C 0.75
S C 0.84
C C 0.89
P C 0.96
D C 0.91
R C 0.65
D H 0.63
L H 0.70
F H 0.82
R H 0.82
A H 0.76
F H 0.68
T H 0.50
S C 0.57
G C 0.58
M C 0.47
I E 0.56
I E 0.61
R E 0.51
K C 0.54
L C 0.67
R C 0.72
Q C 0.63
R C 0.71
D C 0.86
G C 0.79
I C 0.69
D C 0.66
I C 0.60
D C 0.70
T C 0.86
P H 0.55
L H 0.93
Q H 0.98
A H 0.97
L H 0.98
Q H 0.99
K H 0.99
L H 0.99
A H 0.97
A H 0.91
Q H 0.56
G C 0.72
Y C 0.78
Q C 0.69
D C 0.52
V E 0.42
A E 0.39
I C 0.51
Q C 0.70
S C 0.44
L C 0.41
H H 0.37
I C 0.40
I C 0.59
N C 0.66
G C 0.49
D H 0.75
E H 0.80
Y H 0.95
E H 0.99
K H 0.99
I H 0.99
V H 0.99
R H 0.99
E H 0.98
V H 0.99
Q H 0.99
L H 0.98
L H 0.97
R H 0.94
P H 0.87
L H 0.76
F C 0.49
T C 0.48
R C 0.43
L C 0.50
T C 0.66
L C 0.73
G C 0.81
V C 0.84
P C 0.85
L H 0.55
L H 0.72
S H 0.73
S H 0.58
H H 0.74
N H 0.88
D H 0.94
Y H 0.95
V H 0.95
Q H 0.93
L H 0.87
M H 0.82
Q H 0.74
A H 0.73
L H 0.75
R H 0.66
Q C 0.46
Q C 0.66
M C 0.87
P C 0.93
S C 0.86
L C 0.83
R C 0.83
Q C 0.78
T C 0.52
E H 0.63
K H 0.61
V H 0.56
V H 0.55
F H 0.41
M H 0.35
G C 0.53
H C 0.66
G C 0.55
A H 0.47
S H 0.53
H H 0.87
H H 0.94
A H 0.95
F H 0.93
A H 0.90
A H 0.78
Y H 0.62
A H 0.56
C H 0.52
L H 0.53
D H 0.47
H H 0.42
M C 0.44
M C 0.48
T C 0.55
A C 0.59
Q C 0.61
R C 0.72
F C 0.87
P C 0.81
A C 0.68
R C 0.51
V E 0.54
G E 0.68
A E 0.68
V E 0.54
E C 0.64
S C 0.78
Y C 0.91
P C 0.89
E C 0.70
V C 0.64
D C 0.57
I E 0.53
L E 0.62
I E 0.48
D C 0.59
S C 0.59
L C 0.55
R H 0.53
D H 0.61
E C 0.64
G C 0.79
V C 0.76
T C 0.74
G C 0.57
V H 0.50
H H 0.60
L H 0.67
M H 0.76
P H 0.85
L H 0.87
M H 0.86
L H 0.81
V H 0.65
A C 0.64
G C 0.86
D C 0.84
H C 0.78
A C 0.66
I C 0.55
N C 0.56
D C 0.58
M C 0.56
A C 0.58
S C 0.62
D C 0.73
D C 0.86
G C 0.91
D C 0.93
S C 0.80
W C 0.51
K H 0.51
M H 0.53
R H 0.47
F C 0.53
N C 0.68
A C 0.61
A C 0.47
G E 0.53
I C 0.48
P C 0.62
A C 0.71
T C 0.86
P C 0.78
W C 0.60
L C 0.57
S C 0.57
G C 0.54
L C 0.66
G C 0.73
E C 0.72
N C 0.88
P C 0.86
A C 0.70
I C 0.77
R C 0.87
A C 0.70
M C 0.55
F C 0.41
V E 0.37
A H 0.52
H H 0.47
L H 0.70
H H 0.80
Q H 0.81
A H 0.78
L H 0.71
N H 0.53
M H 0.46
A C 0.50
V C 0.53
E C 0.53
E C 0.50
A C 0.56
A C 0.64
END