PFRMAT SS
TARGET T0049_46:332
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded3-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t49.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 13.6536
METHOD
MODEL 1
- C 0.56
- C 0.45
- H 0.35
- H 0.43
- H 0.44
- H 0.60
- H 0.66
- H 0.66
- H 0.71
- H 0.65
- H 0.56
- H 0.54
- C 0.70
- C 0.63
- H 0.80
- H 0.91
- H 0.92
- H 0.97
- H 0.97
- H 0.97
- H 0.92
- H 0.92
- H 0.93
- H 0.90
- H 0.77
- H 0.77
- H 0.71
- H 0.78
- H 0.87
- H 0.87
- H 0.85
- H 0.67
- C 0.69
- C 0.82
- C 0.83
- C 0.85
- C 0.64
- E 0.76
- E 0.95
- E 0.98
- E 0.98
- E 0.96
- E 0.85
- C 0.50
- C 0.88
G C 0.92
E C 0.83
I E 0.54
L E 0.79
Y E 0.87
R E 0.83
R E 0.70
A E 0.49
Q C 0.70
G C 0.84
L C 0.66
A C 0.57
D C 0.57
R C 0.56
E C 0.72
A C 0.82
G C 0.91
R C 0.92
P C 0.79
M C 0.75
R C 0.76
E C 0.71
D C 0.87
T C 0.80
L E 0.52
F E 0.80
R E 0.91
L E 0.95
A E 0.92
S E 0.86
V E 0.68
T C 0.43
K H 0.51
P H 0.74
I H 0.85
V H 0.88
A H 0.91
L H 0.94
A H 0.96
V H 0.96
L H 0.95
R H 0.93
L H 0.91
V H 0.85
A H 0.68
R C 0.66
G C 0.81
E C 0.61
L C 0.55
A C 0.64
L C 0.69
D C 0.79
A C 0.63
P C 0.54
V H 0.66
T H 0.68
R H 0.60
W C 0.61
L C 0.73
P C 0.72
E H 0.57
F C 0.56
- C 0.77
- C 0.89
- C 0.86
- C 0.86
R C 0.83
P C 0.72
R C 0.68
L C 0.63
A C 0.78
D C 0.88
G C 0.72
V C 0.52
T C 0.41
I H 0.75
H H 0.89
H H 0.88
L H 0.85
L H 0.78
T H 0.57
H H 0.48
T C 0.74
S C 0.81
G C 0.88
- C 0.90
- C 0.87
- C 0.71
- C 0.83
- C 0.88
- C 0.89
- H 0.51
- C 0.61
- C 0.74
G C 0.74
S C 0.67
V C 0.74
Y C 0.72
D C 0.73
R C 0.67
L C 0.65
G C 0.60
I C 0.49
S C 0.52
D C 0.60
G C 0.69
I C 0.69
D C 0.57
L H 0.51
R C 0.47
D C 0.57
- C 0.89
- C 0.91
- H 0.73
- H 0.93
- H 0.95
- H 0.97
- H 0.98
- H 0.98
- H 0.96
- H 0.93
- H 0.80
- H 0.65
- C 0.53
- C 0.86
- C 0.88
- C 0.77
F C 0.81
A C 0.87
P C 0.90
G C 0.91
S C 0.67
G E 0.64
W E 0.78
Q E 0.80
Y E 0.67
S C 0.62
L C 0.88
A C 0.89
L C 0.59
D C 0.40
V H 0.45
L H 0.77
G H 0.91
A H 0.95
V H 0.96
V H 0.96
E H 0.94
R H 0.87
A H 0.54
T C 0.81
G C 0.79
Q C 0.66
P C 0.57
L H 0.84
A H 0.94
A H 0.98
A H 0.97
V H 0.95
D H 0.96
A H 0.95
L H 0.91
V H 0.77
A C 0.55
Q C 0.79
P C 0.77
L C 0.78
G C 0.78
M C 0.72
R C 0.77
D C 0.64
C C 0.54
G C 0.47
F C 0.49
V C 0.72
S C 0.91
A C 0.87
E H 0.57
P H 0.74
E H 0.72
R H 0.66
F H 0.60
A H 0.57
V H 0.61
P H 0.56
Y H 0.53
H H 0.46
D C 0.47
G C 0.65
Q C 0.80
P C 0.85
E C 0.70
P C 0.67
V C 0.67
R C 0.66
M C 0.70
R C 0.73
D C 0.63
G C 0.63
I C 0.65
E C 0.68
V C 0.69
P C 0.62
L C 0.48
P H 0.50
- H 0.60
- H 0.65
- H 0.57
- H 0.41
- C 0.43
- C 0.57
- C 0.62
- C 0.73
- C 0.80
- C 0.92
- C 0.94
- C 0.87
I C 0.63
R E 0.56
A C 0.54
N C 0.87
P C 0.90
G C 0.89
F C 0.81
L C 0.69
P C 0.53
- H 0.66
- H 0.56
- C 0.59
- C 0.74
- C 0.67
- E 0.46
- C 0.43
- C 0.71
- C 0.87
- H 0.72
- H 0.94
- H 0.95
- H 0.98
- H 0.99
- H 0.99
- H 0.99
- H 0.98
- H 0.95
- H 0.91
- H 0.74
- C 0.46
- C 0.71
- C 0.79
E C 0.81
T C 0.60
L C 0.65
A C 0.49
D H 0.89
A H 0.96
A H 0.95
- H 0.98
- H 0.99
- H 0.99
- H 0.98
- H 0.96
- H 0.93
- H 0.86
- H 0.68
- C 0.76
- C 0.87
- C 0.54
- E 0.63
- E 0.68
- E 0.61
- C 0.44
- C 0.52
- H 0.39
- H 0.54
- C 0.49
G C 0.76
P C 0.87
G C 0.90
W C 0.63
- E 0.47
- E 0.45
- C 0.58
- C 0.75
- C 0.82
- C 0.77
- C 0.64
- C 0.57
- H 0.51
- H 0.49
- H 0.54
- H 0.45
- H 0.38
- C 0.58
- C 0.87
- C 0.93
- C 0.93
- C 0.80
- C 0.47
- E 0.75
- E 0.80
- E 0.59
- C 0.83
- C 0.91
- C 0.92
- C 0.92
- C 0.89
- C 0.71
- E 0.51
- E 0.75
- E 0.84
- E 0.84
- E 0.78
- E 0.50
- C 0.86
- C 0.85
- C 0.60
- C 0.68
- C 0.76
- C 0.80
- C 0.60
- E 0.74
- E 0.88
- E 0.89
- E 0.85
- E 0.65
- C 0.64
- C 0.78
- C 0.80
- C 0.72
G C 0.63
F C 0.55
G C 0.54
Y C 0.52
L C 0.47
S C 0.47
A C 0.48
V C 0.57
L C 0.71
D C 0.86
- C 0.92
- C 0.88
- C 0.73
- E 0.48
- E 0.74
- E 0.74
- E 0.60
- C 0.54
END