PFRMAT SS
TARGET T0043_1:158
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t43.t98_6.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 7.05966
METHOD
MODEL 1
T C 0.85
V E 0.57
A E 0.86
Y E 0.91
I E 0.89
A E 0.83
I E 0.65
G C 0.62
S C 0.81
N C 0.80
L C 0.66
A C 0.71
S C 0.71
P H 0.70
L H 0.95
E H 0.98
Q H 0.97
V H 0.99
N H 1.00
A H 1.00
A H 0.99
L H 0.99
K H 0.99
A H 0.99
L H 0.98
G H 0.93
D H 0.88
I H 0.65
P C 0.67
E C 0.72
S C 0.53
H E 0.54
I E 0.64
L E 0.61
T E 0.55
V C 0.46
S C 0.51
S C 0.36
F E 0.39
Y E 0.45
R C 0.46
T C 0.74
P C 0.92
P C 0.88
L C 0.74
G C 0.73
P C 0.66
Q C 0.72
D C 0.87
Q C 0.87
P C 0.84
D C 0.68
Y C 0.50
L E 0.52
N E 0.63
A E 0.84
A E 0.93
V E 0.94
A E 0.94
L E 0.89
E E 0.66
T C 0.66
S C 0.67
L C 0.75
A C 0.92
P H 0.61
E H 0.92
E H 0.94
L H 0.95
L H 0.97
N H 0.97
H H 0.96
T H 0.94
Q H 0.93
R H 0.85
I H 0.89
E H 0.93
L H 0.89
Q H 0.77
Q C 0.51
G C 0.77
R C 0.61
V C 0.48
R C 0.43
K H 0.56
A H 0.53
E C 0.52
R C 0.62
W C 0.76
G C 0.93
P C 0.93
R C 0.78
T C 0.59
L C 0.51
D E 0.47
L E 0.43
D E 0.46
I E 0.51
M E 0.55
L E 0.54
F C 0.59
G C 0.87
N C 0.82
E C 0.58
V C 0.51
I C 0.49
N C 0.54
T C 0.67
E C 0.70
R C 0.59
L E 0.50
T E 0.57
V C 0.56
P C 0.81
H C 0.77
Y C 0.60
D H 0.61
M H 0.61
K H 0.56
N H 0.46
R C 0.43
G C 0.46
F C 0.48
M C 0.39
L C 0.36
W C 0.48
P C 0.50
L H 0.86
F H 0.90
E H 0.89
I H 0.63
A C 0.75
P C 0.80
E C 0.66
L C 0.59
V C 0.61
F C 0.72
P C 0.83
D C 0.83
G C 0.65
E H 0.53
M C 0.48
L H 0.77
R H 0.92
Q H 0.95
I H 0.94
L H 0.94
H H 0.92
T H 0.89
R H 0.73
A H 0.54
F H 0.47
D C 0.55
K C 0.61
L C 0.69
N C 0.79
K C 0.75
W C 0.77
END