PFRMAT SS
TARGET T0043_1:158
AUTHOR 1751-3146-3362
METHOD Using neural net fssp-12345-IDaa1-9-6-11-9-3-8-7-ehl-seeded6-trained.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    9	    6
METHOD	   11	    9
METHOD	    3	    8
METHOD	    7	    3 (1 EHL )
METHOD The input amino acid frequencies were determined from
METHOD alignment t43.remote_4.a2m.gz
METHOD with weighted counts, using HenikoffWeight(1 bits/column, 0.5)
METHOD The weighting was determined by the posterior distribution
METHOD after regularizing with recode3.20comp.
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 13.6822
METHOD
MODEL 1
T C 0.85
V E 0.58
A E 0.88
Y E 0.92
I E 0.91
A E 0.84
I E 0.67
G C 0.60
S C 0.81
N C 0.80
L C 0.62
A C 0.64
S C 0.60
P H 0.79
L H 0.96
E H 0.99
Q H 0.97
V H 0.99
N H 1.00
A H 1.00
A H 0.99
L H 0.99
K H 0.99
A H 0.99
L H 0.97
G H 0.91
D H 0.83
I H 0.52
P C 0.79
E C 0.77
S C 0.60
H E 0.55
I E 0.68
L E 0.66
T E 0.58
V E 0.46
S C 0.47
S C 0.35
F H 0.37
Y E 0.39
R C 0.47
T C 0.74
P C 0.93
P C 0.89
L C 0.75
G C 0.71
P C 0.65
Q C 0.70
D C 0.81
Q C 0.81
P C 0.77
D C 0.61
Y C 0.47
L E 0.40
N E 0.50
A E 0.75
A E 0.89
V E 0.90
A E 0.91
L E 0.84
E E 0.60
T C 0.68
S C 0.68
L C 0.74
A C 0.91
P H 0.62
E H 0.92
E H 0.95
L H 0.95
L H 0.97
N H 0.97
H H 0.96
T H 0.95
Q H 0.93
R H 0.87
I H 0.88
E H 0.91
L H 0.84
Q H 0.73
Q C 0.49
G C 0.75
R C 0.58
V C 0.44
R H 0.44
K H 0.55
A H 0.56
E C 0.47
R C 0.64
W C 0.80
G C 0.93
P C 0.94
R C 0.78
T C 0.60
L C 0.52
D E 0.49
L E 0.49
D E 0.55
I E 0.61
M E 0.62
L E 0.59
F C 0.58
G C 0.85
N C 0.78
E C 0.56
V C 0.54
I C 0.56
N C 0.61
T C 0.66
E C 0.62
R C 0.50
L E 0.51
T E 0.54
V C 0.59
P C 0.88
H C 0.88
Y C 0.70
D H 0.55
M H 0.53
K H 0.47
N C 0.48
R H 0.43
G C 0.42
F C 0.43
M H 0.34
L H 0.48
W H 0.51
P H 0.50
L H 0.89
F H 0.92
E H 0.91
I H 0.65
A C 0.73
P C 0.76
E C 0.59
L C 0.58
V C 0.61
F C 0.74
P C 0.84
D C 0.82
G C 0.63
E H 0.53
M H 0.52
L H 0.76
R H 0.90
Q H 0.93
I H 0.92
L H 0.93
H H 0.91
T H 0.87
R H 0.73
A H 0.53
F C 0.47
D C 0.57
K C 0.58
L C 0.63
N C 0.72
K C 0.73
W C 0.77
END