Description

The Mammalian Gene Collection $organism A-list missing full CDS clones from 25 Apr 2003. A-list is comprised of all the known, well-characterized human genes that don't have MGC representitives.

Method

Genes on the MGC A-list are selected by name from RefSeq mRNAs that align to the $organism genome. There were 47 of the 2038 genes on the A-list that couldn't be located using this methodology. These are either RefSeq mRNAs that didn't have alignments or where the gene name could not be associated with a RefSeq mRNA.

A-List genes without RefSeq alignments

The following RefSeq mRNAs either didn't align to the genome or pass the alignment quality filters.
ADCYAP1R1NM_001118
CCR4NM_005508
CRNNM_006587
CYP2D6NM_000106
DCSTAMPNM_030788
EIF2C1NM_012199
EPHB3NM_004443
ERN2NM_033266
FSCN2NM_012418
GAGE3NM_001473
GAGE6NM_001476
GAGE7BNM_001477
GALNT9NM_021808
GALR2NM_003857
HIST2H2ABNM_175065
ILT7NM_012276
KBF2NM_015874
KIR2DS3NM_012313
KNTC1NM_014708
KRTAP4-14NM_033059
KRTAP9-8NM_031963
MAGEB3NM_002365
OR2H3NM_007160
PDE6GNM_002602
PPFIA2NM_003625
SCN10ANM_006514
SCRT1NM_031309
SHOXNM_000451
SHOXNM_006883
ZNF73NM_012480

A-List genes that couldn't be associated with a RefSeq mRNA

An associated RefSeq couldn't be located for the following genes when searching by gene name.
DMRT3
FER1L4
FLJ13659
FLJ14356
FLJ20573
FLJ38637
HUMPPA
KCNH3
KIAA1361
LBN
LOC201382
LOC90317
MUC5B
SHANK3
SLC24A3
TCF20
TUBA8