Best Alignments for T0500

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2oszA	2.2900e+00	2oszA/T0500-2oszA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ds3A	5.0137e+00	2ds3A/T0500-2ds3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o7qA	8.6575e+00	1o7qA/T0500-1o7qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.9
2gw3A	9.7350e+00	2gw3A/T0500-2gw3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qg3A	1.0750e+01	2qg3A/T0500-2qg3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eihA	1.0891e+01	2eihA/T0500-2eihA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tt7A	1.1731e+01	1tt7A/T0500-1tt7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.35.1.2 c.2.1.1
1qorA	1.2073e+01	1qorA/T0500-1qorA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.35.1.2 c.2.1.1
1xmzA	1.4891e+01	1xmzA/T0500-1xmzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2icrA	1.5077e+01	2icrA/T0500-2icrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yb5A	1.5749e+01	1yb5A/T0500-1yb5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.35.1.2 c.2.1.1
2ogrA	1.5839e+01	2ogrA/T0500-2ogrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2c9jA	1.7881e+01	2c9jA/T0500-2c9jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lzjA	1.8061e+01	1lzjA/T0500-1lzjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.68.1.9
2dvkA	1.8420e+01	2dvkA/T0500-2dvkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wlyA	1.8466e+01	1wlyA/T0500-1wlyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dddA	2.0370e+01	2dddA/T0500-2dddA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a0b	2.1916e+01	2a0b/T0500-2a0b-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q6uA	2.3187e+01	1q6uA/T0500-1q6uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.26.1.1
1q6hA	2.3875e+01	1q6hA/T0500-1q6hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.26.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001