Best Alignments for T0500

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ozgA	9.0304e-01	2ozgA/T0500-2ozgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a4nA	1.3971e+00	2a4nA/T0500-2a4nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1s3zA	1.4641e+00	1s3zA/T0500-1s3zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2hv2A	1.6915e+00	2hv2A/T0500-2hv2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i00A	1.7300e+00	2i00A/T0500-2i00A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ae6A	1.8140e+00	2ae6A/T0500-2ae6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1mk4A	1.8262e+00	1mk4A/T0500-1mk4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2pc1A	1.8344e+00	2pc1A/T0500-2pc1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i1dA	2.0185e+00	1i1dA/T0500-1i1dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2dxqA	2.0373e+00	2dxqA/T0500-2dxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c26A	2.1290e+00	3c26A/T0500-3c26A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q0yA	2.1331e+00	2q0yA/T0500-2q0yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q4vA	2.1691e+00	2q4vA/T0500-2q4vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1b4fA	2.2337e+00	1b4fA/T0500-1b4fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.60.1.2
2o28A	2.2791e+00	2o28A/T0500-2o28A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qecA	2.3782e+00	2qecA/T0500-2qecA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b0xA	2.4809e+00	1b0xA/T0500-1b0xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.60.1.2
1ks9A	2.5399e+00	1ks9A/T0500-1ks9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.100.1.7 c.2.1.6
1yvoA	2.5624e+00	1yvoA/T0500-1yvoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2reeA	2.5876e+00	2reeA/T0500-2reeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001