Best Alignments for T0500

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1ufoA	1.5121e+01	1ufoA/T0500-1ufoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.27
2jgoA	4.4092e+01	2jgoA/T0500-2jgoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qg3A	6.2385e+01	2qg3A/T0500-2qg3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hdwA	6.2525e+01	2hdwA/T0500-2hdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2og1A	7.7522e+01	2og1A/T0500-2og1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cvl	7.9431e+01	1cvl/T0500-1cvl-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p3qQ	8.2388e+01	1p3qQ/T0500-1p3qQ-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jd1A	8.4052e+01	1jd1A/T0500-1jd1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2yysA	8.4121e+01	2yysA/T0500-2yysA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cosA	8.6265e+01	1cosA/T0500-1cosA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	k.4.1.1
1a8qA	9.1253e+01	1a8qA/T0500-1a8qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.12
1b6g	9.4832e+01	1b6g/T0500-1b6g-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ede	9.5406e+01	1ede/T0500-1ede-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zoiA	9.5753e+01	1zoiA/T0500-1zoiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ba2A	9.6272e+01	2ba2A/T0500-2ba2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ty4C	9.6511e+01	1ty4C/T0500-1ty4C-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sluA	9.8089e+01	1sluA/T0500-1sluA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vofB	9.8312e+01	2vofB/T0500-2vofB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i7wB	1.0075e+02	1i7wB/T0500-1i7wB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z99A	1.0080e+02	2z99A/T0500-2z99A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001