# List of top-scoring protein chains for T0500.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1sj7A	174	16.86	a.215.1.1	105603
1jwhC	215	25.73	g.41.4.1	71915
1qf8A	182	25.74	g.41.4.1	45212
1sj8A	308	27.26	a.215.1.1,a.216.1.1	105606,105607
1rqfA	184	28.94	g.41.4.1	111914
3cpkA	150	33.96		
2k2eA	158	35.28		
2ctuA	73	37.27		
1j5sA	463	59.17	c.1.9.8	71580
2cwlA	302	64.69	a.25.1.3	130927
2v8tA	302	67.09